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2024-05-21 04:33:44

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Shigella dysenteriae Sd197, Sd197

Number of genes found: 73

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Shigella dysenteriae Sd197, Sd197
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA SDY_1016 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS958263 264 - 0.473485
add SDY_1846 adenosine deaminaseRecName: Full=Adenosine deaminase; EC=3.5.4.4; AltName: Full=Adenosine aminohydrolase; chromosome CDS1681638 1002 + 0.537924
adk SDY_0445 AdkRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS435696 645 - 0.517829
amn SDY_2253 AMP nucleosidaseSubName: Full=AMP nucleosidase; chromosome CDS2050352 1455 - 0.499656
apt SDY_0450 adenine phosphoribosyltransferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome CDS441552 552 - 0.536232
carA SDY_0054 carbamoyl-phosphate synthetase, glutamine subunitRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS48405 1149 + 0.528285
carB SDY_0055 carbamoyl-phosphate synthase large subunitRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome CDS49571 3222 + 0.55928
cdd SDY_2144 cytidine/deoxycytidine deaminaseRecName: Full=Cytidine deaminase; EC=3.5.4.5; AltName: Full=Cytidine aminohydrolase; Short=CDA; chromosome CDS1943268 885 - 0.550282
cmk SDY_2348 cytidylate kinaseRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; chromosome CDS2141320 684 - 0.538012
cpdB SDY_4383 2':3'-cyclic-nucleotide 2'-phosphodiesteraseSubName: Full=2:3-cyclic-nucleotide 2-phosphodiesterase; chromosome CDS4103167 1950 - 0.494359
cyaA SDY_3940 adenylate cyclaseRecName: Full=Adenylate cyclase; EC=4.6.1.1; chromosome CDS3668763 2547 - 0.518649
dcd SDY_2197 2'-deoxycytidine 5'-triphosphate deaminaseRecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase; EC=3.5.4.13; chromosome CDS1999267 582 + 0.603093
deoA SDY_4642 thymidine phosphorylaseRecName: Full=Thymidine phosphorylase; EC=2.4.2.4; AltName: Full=TdRPase; chromosome CDS4346161 1323 + 0.553288
deoC SDY_4641 2-deoxyribose-5-phosphate aldolaseRecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase; chromosome CDS4345255 780 + 0.544872
deoD SDY_4644 purine-nucleoside phosphorylaseRecName: Full=Purine nucleoside phosphorylase DeoD-type; Short=PNP; EC=2.4.2.1; chromosome CDS4348838 720 + 0.529167
dut SDY_4070 deoxyuridinetriphosphataseRecName: Full=Deoxyuridine 5-triphosphate nucleotidohydrolase; Short=dUTPase; EC=3.6.1.23; AltName: Full=dUTP pyrophosphatase; chromosome CDS3806201 456 + 0.548246
gmk SDY_4080 guanylate kinaseRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome CDS3814950 624 + 0.487179
gppA SDY_3970 guanosine pentaphosphataseRecName: Full=Guanosine-5-triphosphate,3-diphosphate pyrophosphatase; EC=3.6.1.40; AltName: Full=Guanosine pentaphosphate phosphohydrolase; AltName: Full=pppGpp-5-phosphohydrolase; chromosome CDS3698921 1485 + 0.5367
gpt SDY_0479 guanine-hypoxanthine phosphoribosyltransferaseRecName: Full=Xanthine phosphoribosyltransferase; EC=2.4.2.22; AltName: Full=Xanthine-guanine phosphoribosyltransferase; Short=XGPRT; chromosome CDS465756 459 - 0.51634
guaA SDY_2703 GMP synthetase (glutamine-hydrolyzing)RecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome CDS2494237 1578 - 0.538023
guaC SDY_0134 GMP reductaseRecName: Full=GMP reductase; EC=1.7.1.7; AltName: Full=Guanosine 5-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase; chromosome CDS133980 1044 + 0.509579
hpt SDY_0034 hypoxanthine phosphoribosyltransferaseSubName: Full=Hypoxanthine phosphoribosyltransferase; chromosome CDS32212 549 + 0.499089
ndk SDY_2714 nucleoside diphosphate kinaseRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome CDS2507711 432 - 0.530093
nrdA SDY_2428 ribonucleoside diphosphate reductase 1, alpha subunit, B1RecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS2228442 2286 + 0.538933
nrdB SDY_2429 ribonucleoside-diphosphate reductase 1, beta subunit, B2SubName: Full=Ribonucleoside-diphosphate reductase 1, beta subunit, B2; chromosome CDS2230873 1131 + 0.513705
nrdD SDY_4257 anaerobic ribonucleoside-triphosphate reductaseSubName: Full=Anaerobic ribonucleoside-triphosphate reductase; chromosome CDS3986083 2139 - 0.536232
nrdE SDY_2868 ribonucleoside-diphosphate reductase 2, alpha subunitRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS2652251 1851 + 0.514317
nrdF SDY_2869 ribonucleoside-diphosphate reductase 2, beta chainRecName: Full=Ribonucleoside-diphosphate reductase subunit beta; EC=1.17.4.1; chromosome CDS2654366 969 + 0.473684
nrdI SDY_2867 conserved hypothetical proteinRecName: Full=Protein NrdI; chromosome CDS2651829 411 + 0.552311
nupC SDY_2593 permease of transport system for 3 nucleosidesSubName: Full=Permease of transport system for 3 nucleosides; chromosome CDS2390420 1203 + 0.492103
pfs SDY_0175 conserved hypothetical proteinRecName: Full=5-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Short=MTA/SAH nucleosidase; Short=MTAN; EC=3.2.2.9; AltName: Full=5-methylthioadenosine nucleosidase; Short=MTA nucleosidase; AltName: Full=S-adenosylhomocysteine nucleosidase; Short=AdoHcy nucleosidase; Short=SAH nucleosidase; Short=SRH nucleosidase; chromosome CDS178661 699 - 0.526466
ppx SDY_2691 exopolyphosphataseSubName: Full=Exopolyphosphatase; chromosome CDS2484753 1542 + 0.510376
prsA SDY_1256 phosphoribosylpyrophosphate synthetaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; chromosome CDS1163019 948 - 0.526371
purA SDY_4412 adenylosuccinate synthetaseRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome CDS4127842 1299 - 0.538876
purB SDY_2021 adenylosuccinate lyaseSubName: Full=Adenylosuccinate lyase; chromosome CDS1829280 1371 + 0.525164
purC SDY_2664 phosphoribosylaminoimidazole-succinocarboxamidesynthetaseRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome CDS2456494 714 - 0.521008
purD SDY_3721 phosphoribosylglycinamide synthetaseRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome CDS3452000 1290 + 0.582946
purE SDY_0275 AIR carboxylase, catalytic subunitRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; chromosome CDS270569 510 - 0.588235
purF SDY_2511 amidophosphoribosyltransferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome CDS2309226 1518 - 0.528986
purH SDY_3720 phosphoribosylaminoimidazolecarboxamideformyltransferaseRecName: Full=Bifunctional purine biosynthesis protein PurH; Includes: RecName: Full=Phosphoribosylaminoimidazolecarboxamide formyltransferase; EC=2.1.2.3; AltName: Full=AICAR transformylase; Includes: RecName: Full=IMP cyclohydrolase; EC=3.5.4.10; AltName: Full=ATIC; AltName: Full=IMP synthase; AltName: Full=Inosinicase; chromosome CDS3450399 1590 + 0.562264
purK SDY_0274 AIR carboxylase, CO(2)-fixing subunitSubName: Full=AIR carboxylase, CO(2)-fixing subunit; chromosome CDS269505 1068 - 0.564607
purL SDY_2747 phosphoribosylformyl-glycineamide synthetase FGAM synthetaseRecName: Full=Phosphoribosylformylglycinamidine synthase; Short=FGAM synthase; Short=FGAMS; EC=6.3.5.3; AltName: Full=Formylglycinamide ribotide amidotransferase; Short=FGARAT; AltName: Full=Formylglycinamide ribotide synthetase; chromosome CDS2545533 3888 - 0.568158
purM SDY_2688 phosphoribosylaminoimidazole synthetaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; chromosome CDS2480836 1038 + 0.530829
purN SDY_2689 phosphoribosylglycinamide formyltransferase 1SubName: Full=Phosphoribosylglycinamide formyltransferase 1; chromosome CDS2481873 639 + 0.538341
purT SDY_1135 phosphoribosylglycinamide formyltransferase 2RecName: Full=Phosphoribosylglycinamide formyltransferase 2; Short=GART 2; EC=2.1.2.-; AltName: Full=5-phosphoribosylglycinamide transformylase 2; AltName: Full=Formate-dependent GAR transformylase; AltName: Full=GAR transformylase 2; chromosome CDS1053879 1179 + 0.538592
purU SDY_1284 formyltetrahydrofolate deformylaseSubName: Full=Formyltetrahydrofolate deformylase; chromosome CDS1189567 843 - 0.47331
pyrB SDY_4264 aspartate carbamoyltransferase, catalytic subunitRecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome CDS3997021 936 - 0.536325
pyrC SDY_2091 dihydro-orotaseRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS1899632 1047 + 0.534862
pyrD SDY_0918 dihydro-orotate dehydrogenaseRecName: Full=Dihydroorotate dehydrogenase (quinone); EC=1.3.5.2; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase; chromosome CDS866109 1011 + 0.463897
pyrE SDY_4073 orotate phosphoribosyltransferaseRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome CDS3808651 642 - 0.529595
pyrF SDY_1357 orotidine-5'-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome CDS1254505 738 + 0.52981
pyrG SDY_2997 CTP synthetaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome CDS2764009 1638 - 0.518926
pyrH SDY_0187 uridylate kinaseRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome CDS192117 726 + 0.530303
pyrI SDY_4263 aspartate carbamoyltransferase, regulatory subunitRecName: Full=Aspartate carbamoyltransferase regulatory chain; chromosome CDS3996547 462 - 0.480519
tdk SDY_1290 thymidine kinaseRecName: Full=Thymidine kinase; EC=2.7.1.21; chromosome CDS1195312 618 + 0.425566
thyA SDY_3044 thymidylate synthetaseRecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome CDS2820990 795 - 0.510692
tmk SDY_2052 thymidylate kinaseRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome CDS1864226 642 - 0.538941
udk SDY_2196 uridine/cytidine kinaseRecName: Full=Uridine kinase; EC=2.7.1.48; AltName: Full=Cytidine monophosphokinase; AltName: Full=Uridine monophosphokinase; chromosome CDS1998480 696 + 0.488506
udp SDY_3912 uridine phosphorylaseRecName: Full=Uridine phosphorylase; EC=2.4.2.3; chromosome CDS3643081 762 - 0.538058
upp SDY_2687 uracil phosphoribosyltransferaseRecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; chromosome CDS2479884 654 - 0.529052
uraA SDY_2686 uracil transportSubName: Full=Uracil transport; chromosome CDS2478509 1290 - 0.51938
ushA SDY_0438 UDP-sugar hydrolaseSubName: Full=UDP-sugar hydrolase; chromosome CDS425613 1653 - 0.507562
yaaF SDY_0052 conserved hypothetical proteinRecName: Full=Non-specific ribonucleoside hydrolase RihC; EC=3.2.-.-; AltName: Full=Purine/pyrimidine ribonucleoside hydrolase; chromosome CDS46045 915 + 0.553005
ybbT SDY_0397 conserved hypothetical proteinRecName: Full=Ureidoglycolate lyase; EC=4.3.2.3; AltName: Full=Ureidoglycolatase; chromosome CDS381904 483 - 0.513458
ycdG SDY_0981 putative transport proteinSubName: Full=Putative transport protein; chromosome CDS930606 1395 - 0.541936
ycfF SDY_2047 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1857758 360 - 0.511111
yeiJ SDY_2105 putative transport system permease proteinSubName: Full=Putative transport system permease protein; chromosome CDS1908152 1251 + 0.509992
yeiK SDY_2104 conserved hypothetical proteinRecName: Full=Putative pyrimidine-specific ribonucleoside hydrolase RihB; EC=3.2.2.8; AltName: Full=Cytidine/uridine-specific hydrolase; chromosome CDS1907237 816 + 0.53799
yfhC SDY_2749 putative deaminaseRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS2551235 537 - 0.528864
yggV SDY_3118 putative ribosomal proteinRecName: Full=dITP/XTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-canonical purine NTP pyrophosphatase; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; chromosome CDS2892394 594 - 0.547138
yghT SDY_3087 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2862935 705 - 0.479433
yicE SDY_4086 putative transport proteinSubName: Full=Putative transport protein; chromosome CDS3822473 1392 + 0.552443
yicP SDY_4146 probable adenine deaminase (synthesis xanthine)RecName: Full=Adenine deaminase; Short=Adenase; Short=Adenine aminase; EC=3.5.4.2; chromosome CDS3878058 1755 + 0.54416