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2024-05-19 10:42:20

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Listeria monocytogenes str. 4b F2365, 4b F2365

Number of genes found: 70

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Listeria monocytogenes str. 4b F2365, 4b F2365
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA LMOf2365_2699 cytidine/deoxycytidylate deaminase family proteinRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS2746779 471 - 0.418259
NA LMOf2365_2377 Ser/Thr protein phosphatase family proteinSubName: Full=Ser/Thr protein phosphatase family protein; chromosome CDS2431187 1389 - 0.405328
NA LMOf2365_0582 CBS domain proteinSubName: Full=CBS domain protein; chromosome CDS598014 636 - 0.361635
NA LMOf2365_1715 dUTPase family proteinSubName: Full=DUTPase family protein; chromosome CDS1737077 471 - 0.377919
NA LMOf2365_0161 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS155691 237 + 0.341772
NA LMOf2365_0489 cytosine/purines/uracil/thiamine/allantoin permease family proteinSubName: Full=Cytosine/purines/uracil/thiamine/allantoin permease family protein; chromosome CDS505978 1284 + 0.395639
NA LMOf2365_2584 adenylate kinaseRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS2643307 648 - 0.387346
NA LMOf2365_1248 HAM1 family proteinRecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; chromosome CDS1242501 612 + 0.403595
NA LMOf2365_1513 MTA/SAH nucleosidaseRecName: Full=5-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Short=MTA/SAH nucleosidase; Short=MTAN; EC=3.2.2.9; AltName: Full=5-methylthioadenosine nucleosidase; Short=MTA nucleosidase; AltName: Full=S-adenosylhomocysteine nucleosidase; Short=AdoHcy nucleosidase; Short=SAH nucleosidase; Short=SRH nucleosidase; chromosome CDS1505707 702 - 0.38604
NA LMOf2365_1221 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1211024 531 + 0.357815
NA LMOf2365_2276 putative Ada regulatory proteinSubName: Full=Putative Ada regulatory protein; chromosome CDS2329106 570 + 0.373684
NA LMOf2365_1502 zinc-binding, ComEB family proteinSubName: Full=Zinc-binding, ComEB family protein; chromosome CDS1497321 561 - 0.383244
NA LMOf2365_0517 MutT/nudix family proteinSubName: Full=MutT/nudix family protein; chromosome CDS531680 729 + 0.412894
NA LMOf2365_1983 purine nucleoside phosphorylase I, inosine and guanosine-specificRecName: Full=Purine nucleoside phosphorylase; EC=2.4.2.1; AltName: Full=Inosine-guanosine phosphorylase; chromosome CDS2014943 819 - 0.396825
NA LMOf2365_2517 thymidine kinaseRecName: Full=Thymidine kinase; EC=2.7.1.21; chromosome CDS2575285 576 - 0.340278
NA LMOf2365_0148 Ser/Thr protein phosphatase family proteinSubName: Full=Ser/Thr protein phosphatase family protein; chromosome CDS143175 2349 - 0.422307
NA LMOf2365_1855 guanylate kinase family proteinRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome CDS1881860 618 - 0.409385
NA LMOf2365_2249 HIT family proteinSubName: Full=HIT family protein; chromosome CDS2300292 423 + 0.375887
NA LMOf2365_2339 MutT/nudix family proteinSubName: Full=MutT/nudix family protein; chromosome CDS2399006 408 - 0.401961
NA LMOf2365_0540 glutamine amidotransferase, class ISubName: Full=Glutamine amidotransferase, class I; chromosome CDS553674 681 + 0.384728
NA LMOf2365_1729 deoxynucleoside kinase family proteinSubName: Full=Deoxynucleoside kinase family protein; chromosome CDS1748768 645 + 0.364341
NA LMOf2365_1868 pyrimidine operon regulatory protein PyrRRecName: Full=Bifunctional protein PyrR; Includes: RecName: Full=Pyrimidine operon regulatory protein; Includes: RecName: Full=Uracil phosphoribosyltransferase; Short=UPRTase; EC=2.4.2.9; chromosome CDS1896957 552 - 0.425725
NA LMOf2365_0084 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS84907 711 + 0.392405
ade LMOf2365_1767 adenine deaminaseRecName: Full=Adenine deaminase; Short=Adenase; Short=Adenine aminase; EC=3.5.4.2; chromosome CDS1790887 1740 - 0.390805
apt LMOf2365_1543 adenine phosphoribosyltransferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome CDS1538277 522 - 0.362069
carA LMOf2365_1864 carbamoyl-phosphate synthase, small subunitRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS1892194 1092 - 0.416667
carB LMOf2365_1863 carbamoyl-phosphate synthase, large subunitRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome CDS1888989 3213 - 0.434485
cdd LMOf2365_1482 cytidine deaminaseSubName: Full=Cytidine deaminase; EC=3.5.4.5; chromosome CDS1476501 396 - 0.411616
cmk LMOf2365_1968 cytidylate kinaseRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; chromosome CDS1995066 675 - 0.391111
deoC LMOf2365_2018 deoxyribose-phosphate aldolaseRecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase; chromosome CDS2050850 672 - 0.416667
deoD LMOf2365_1884 purine nucleoside phosphorylaseRecName: Full=Purine nucleoside phosphorylase DeoD-type; Short=PNP; EC=2.4.2.1; chromosome CDS1911699 702 - 0.376068
dgt LMOf2365_2636 deoxyguanosinetriphosphate triphosphohydrolaseSubName: Full=Deoxyguanosinetriphosphate triphosphohydrolase; EC=3.1.5.1; chromosome CDS2682305 1398 - 0.412732
fhs LMOf2365_1906 formate--tetrahydrofolate ligaseRecName: Full=Formate--tetrahydrofolate ligase; EC=6.3.4.3; AltName: Full=Formyltetrahydrofolate synthetase; Short=FHS; Short=FTHFS; chromosome CDS1931861 1683 - 0.41533
flaR LMOf2365_1431 DNA topology modulation protein FlaRSubName: Full=DNA topology modulation protein FlaR; chromosome CDS1421299 534 + 0.308989
guaA LMOf2365_1110 GMP synthaseRecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome CDS1123963 1545 + 0.433657
ndk LMOf2365_1958 nucleoside diphosphate kinaseRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome CDS1985497 444 - 0.394144
nrdA LMOf2365_2187 ribonucleoside-diphosphate reductase, alpha subunitRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS2226805 2292 - 0.375218
nrdB LMOf2365_2186 ribonucleoside-diphosphate reductase, beta subunitRecName: Full=Ribonucleoside-diphosphate reductase subunit beta; EC=1.17.4.1; chromosome CDS2225700 1050 - 0.36
nrdD LMOf2365_0299 anaerobic ribonucleoside-triphosphate reductaseSubName: Full=Anaerobic ribonucleoside-triphosphate reductase; EC=1.17.4.2; chromosome CDS318506 2151 + 0.396095
pbuX LMOf2365_1913 xanthine permeaseSubName: Full=Xanthine permease; chromosome CDS1937830 1308 - 0.409021
prs-1 LMOf2365_0210 ribose-phosphate pyrophosphokinaseRecName: Full=Ribose-phosphate pyrophosphokinase 1; Short=RPPK 1; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase 1; Short=P-Rib-PP synthase 1; Short=PRPP synthase 1; chromosome CDS207997 957 + 0.38976
prs-2 LMOf2365_0538 ribose-phosphate pyrophosphokinaseRecName: Full=Ribose-phosphate pyrophosphokinase 2; Short=RPPK 2; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase 2; Short=P-Rib-PP synthase 2; Short=PRPP synthase 2; chromosome CDS551432 936 + 0.428419
purA LMOf2365_0065 adenylosuccinate synthetaseRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome CDS65079 1293 + 0.399845
purB LMOf2365_1798 adenylosuccinate lyaseSubName: Full=Adenylosuccinate lyase; EC=4.3.2.2; chromosome CDS1824718 1293 - 0.399072
purC LMOf2365_1797 phosphoribosylaminoimidazole-succinocarboxamidesynthaseRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome CDS1823924 714 - 0.386555
purD LMOf2365_1789 phosphoribosylamine--glycine ligaseRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome CDS1814903 1263 - 0.405384
purE LMOf2365_1800 phosphoribosylaminoimidazole carboxylase, catalytic subunitRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; chromosome CDS1827146 489 - 0.415133
purF LMOf2365_1793 amidophosphoribosyltransferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome CDS1819356 1428 - 0.417367
purH LMOf2365_1790 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolaseRecName: Full=Bifunctional purine biosynthesis protein PurH; Includes: RecName: Full=Phosphoribosylaminoimidazolecarboxamide formyltransferase; EC=2.1.2.3; AltName: Full=AICAR transformylase; Includes: RecName: Full=IMP cyclohydrolase; EC=3.5.4.10; AltName: Full=ATIC; AltName: Full=IMP synthase; AltName: Full=Inosinicase; chromosome CDS1816190 1530 - 0.401961
purK LMOf2365_1799 phosphoribosylaminoimidazole carboxylase, ATPase subunitSubName: Full=Phosphoribosylaminoimidazole carboxylase, ATPase subunit; EC=4.1.1.21; chromosome CDS1826029 1134 - 0.377425
purL LMOf2365_1794 phosphoribosylformylglycinamidine synthase IIRecName: Full=Phosphoribosylformylglycinamidine synthase 2; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase II; Short=FGAM synthase II; chromosome CDS1820768 2220 - 0.425676
purM LMOf2365_1792 phosphoribosylformylglycinamidine cyclo-ligaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; chromosome CDS1818288 1050 - 0.426667
purN LMOf2365_1791 phosphoribosylglycinamide formyltransferaseSubName: Full=Phosphoribosylglycinamide formyltransferase; EC=2.1.2.2; chromosome CDS1817725 567 - 0.38448
purQ LMOf2365_1795 phosphoribosylformylglycinamidine synthase IRecName: Full=Phosphoribosylformylglycinamidine synthase 1; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase I; Short=FGAM synthase I; chromosome CDS1822980 684 - 0.415205
purR LMOf2365_0203 Pur operon transcriptional repressorSubName: Full=Pur operon transcriptional repressor; chromosome CDS201150 819 + 0.388278
purS LMOf2365_1796 phosphoribosylformylglycinamidine synthase, PurS proteinSubName: Full=Phosphoribosylformylglycinamidine synthase, PurS protein; chromosome CDS1823667 246 - 0.349593
pyn LMOf2365_2016 pyrimidine-nucleoside phosphorylaseSubName: Full=Pyrimidine-nucleoside phosphorylase; EC=2.4.2.2; chromosome CDS2048328 1302 - 0.420891
pyrB LMOf2365_1866 aspartate carbamoyltransferaseRecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome CDS1894550 912 - 0.403509
pyrC LMOf2365_1865 dihydroorotase, multifunctional complex typeRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS1893282 1281 - 0.419204
pyrD LMOf2365_1861 dihydroorotate dehydrogenaseRecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase B; EC=1.3.1.14; AltName: Full=Dihydroorotate oxidase B; AltName: Full=Orotate reductase (NADH); chromosome CDS1887291 915 - 0.451366
pyrE LMOf2365_1859 orotate phosphoribosyltransferaseRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome CDS1885967 630 - 0.387302
pyrF LMOf2365_1860 orotidine 5'-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome CDS1886593 702 - 0.417379
pyrG LMOf2365_2531 CTP synthaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome CDS2591311 1599 - 0.39212
pyrH LMOf2365_1330 uridylate kinaseRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome CDS1319275 729 + 0.414266
thyA LMOf2365_1904 thymidylate synthaseRecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome CDS1928892 945 - 0.387302
tmk LMOf2365_2672 thymidylate kinaseRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome CDS2721556 627 - 0.435407
udk LMOf2365_1516 uridine kinaseRecName: Full=Uridine kinase; EC=2.7.1.48; AltName: Full=Cytidine monophosphokinase; AltName: Full=Uridine monophosphokinase; chromosome CDS1507808 630 - 0.347619
upp LMOf2365_2511 uracil phosphoribosyltransferaseRecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; chromosome CDS2569462 630 - 0.404762
uraA LMOf2365_1867 uracil permeaseSubName: Full=Uracil permease; chromosome CDS1895542 1287 - 0.428904
xpt LMOf2365_1914 xanthine phosphoribosyltransferaseRecName: Full=Xanthine phosphoribosyltransferase; Short=XPRTase; EC=2.4.2.22; chromosome CDS1939144 579 - 0.376511