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2024-05-19 10:43:38

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Yersinia pestis KIM, KIM

Number of genes found: 72

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Yersinia pestis KIM, KIM
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
adk adenylate kinaseRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS1200105 645 + 0.458915
amn AMP nucleosidaseSubName: Full=AMP nucleosidase; SubName: Full=Putative AMP nucleosidase; chromosome CDS2336537 1509 - 0.498343
apt adenine phosphoribosyltransferaseSubName: Full=Adenine phosphoribosyltransferase; SubName: Full=Putative phosphoribosyl transferase protein; chromosome CDS4481143 567 + 0.363316
apt adenine phosphoribosyltransferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome CDS1193624 564 + 0.482269
carA carbamoyl-phosphate synthetase, glutamine (small) subunitRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS4105321 1203 - 0.504572
carB carbamoyl-phosphate synthase large subunitRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome CDS4102072 3234 - 0.516388
cdd cytidine/deoxycytidine deaminaseRecName: Full=Cytidine deaminase; EC=3.5.4.5; AltName: Full=Cytidine aminohydrolase; Short=CDA; chromosome CDS2928156 885 + 0.500565
cmk cytidylate kinaseRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; chromosome CDS3075702 693 - 0.507937
codA cytosine deaminaseSubName: Full=Cytosine deaminase; EC=3.5.4.1; chromosome CDS4400898 1311 + 0.517162
cpdB 2':3'-cyclic-nucleotide 2'-phosphodiesteraseSubName: Full=2,3-cyclic-nucleotide 2-phosphodiesterase; EC=3.1.4.16; SubName: Full=2:3-cyclic-nucleotide 2-phosphodiesterase; chromosome CDS734834 1971 - 0.484018
cyaA adenylate cyclaseRecName: Full=Adenylate cyclase; EC=4.6.1.1; AltName: Full=ATP pyrophosphate-lyase; AltName: Full=Adenylyl cyclase; chromosome CDS426519 2553 + 0.492754
dcd 2'-deoxycytidine 5'-triphosphate deaminaseRecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase; EC=3.5.4.13; chromosome CDS2915452 609 - 0.510673
deoC 2-deoxyribose-5-phosphate aldolaseRecName: Full=Deoxyribose-phosphate aldolase 2; Short=DERA 2; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase 2; AltName: Full=Phosphodeoxyriboaldolase 2; Short=Deoxyriboaldolase 2; chromosome CDS4162486 813 - 0.500615
deoC putative deoxyribose-phosphate aldolaseRecName: Full=Deoxyribose-phosphate aldolase 1; Short=DERA 1; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase 1; AltName: Full=Phosphodeoxyriboaldolase 1; Short=Deoxyriboaldolase 1; chromosome CDS3157734 672 + 0.480655
deoD purine-nucleoside phosphorylaseRecName: Full=Purine nucleoside phosphorylase DeoD-type; Short=PNP; EC=2.4.2.1; chromosome CDS4158848 726 - 0.498623
dgt deoxyguanosine triphosphate triphosphohydrolaseRecName: Full=Deoxyguanosinetriphosphate triphosphohydrolase; Short=dGTP triphosphohydrolase; Short=dGTPase; EC=3.1.5.1; chromosome CDS901041 1521 + 0.431295
dut deoxyuridinetriphosphataseRecName: Full=Deoxyuridine 5-triphosphate nucleotidohydrolase; Short=dUTPase; EC=3.6.1.23; AltName: Full=dUTP pyrophosphatase; chromosome CDS101008 471 + 0.490446
gmk guanylate kinaseRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome CDS107994 624 + 0.464744
gpt guanine-hypoxanthine phosphoribosyltransferaseRecName: Full=Xanthine phosphoribosyltransferase; EC=2.4.2.22; AltName: Full=Xanthine-guanine phosphoribosyltransferase; Short=XGPRT; chromosome CDS1089186 459 + 0.48366
guaA GMP synthetase (glutamine-hydrolyzing)RecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome CDS1514989 1578 + 0.494297
guaC GMP reductaseRecName: Full=GMP reductase; EC=1.7.1.7; AltName: Full=Guanosine 5-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase; chromosome CDS844287 1044 + 0.471264
hpt hypoxanthine phosphoribosyltransferaseSubName: Full=Hypoxanthine phosphoribosyltransferase; chromosome CDS871866 546 + 0.47619
ndk nucleoside diphosphate kinaseRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome CDS1500155 429 + 0.475524
nrdA ribonucleoside diphosphate reductase 1, alpha subunit, B1RecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS3278497 2289 + 0.485802
nrdB ribonucleoside-diphosphate reductase 1, beta subunit, B2SubName: Full=Ribonucleoside-diphosphate reductase 1 beta chain; SubName: Full=Ribonucleoside-diphosphate reductase 1, beta subunit, B2; chromosome CDS3280903 1176 + 0.460034
nrdD anaerobic ribonucleoside-triphosphate reductaseSubName: Full=Anaerobic ribonucleoside-triphosphate reductase; EC=1.17.4.2; chromosome CDS815712 2139 - 0.493221
nrdE ribonucleoside-diphosphate reductase 2, alpha subunitRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS1373257 2151 - 0.46583
nrdF ribonucleoside-diphosphate reductase 2, beta chain, fragRecName: Full=Ribonucleoside-diphosphate reductase subunit beta; EC=1.17.4.1; chromosome CDS1372161 972 - 0.426955
nupC permease of transport system for 3 nucleosidesSubName: Full=Nucleoside permease; SubName: Full=Permease of transport system for 3 nucleosides; chromosome CDS1662403 1185 - 0.44557
pfs hypothetical proteinRecName: Full=5-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Short=MTA/SAH nucleosidase; Short=MTAN; EC=3.2.2.9; AltName: Full=5-methylthioadenosine nucleosidase; Short=MTA nucleosidase; AltName: Full=S-adenosylhomocysteine nucleosidase; Short=AdoHcy nucleosidase; Short=SAH nucleosidase; Short=SRH nucleosidase; chromosome CDS900063 702 - 0.509971
ppx exopolyphosphataseSubName: Full=Exopolyphosphatase; SubName: Full=Putative exopolyphosphatase; EC=3.6.1.11; chromosome CDS1552414 1560 - 0.510256
prsA phosphoribosylpyrophosphate synthetaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; Short=P-Rib-PP synthase; Short=PRPP synthase; chromosome CDS2531064 966 + 0.5
purA adenylosuccinate synthetaseRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome CDS717962 1311 + 0.508009
purB adenylosuccinate lyaseSubName: Full=Adenylosuccinate lyase; chromosome CDS1976919 1380 - 0.475362
purC phosphoribosylaminoimidazole-succinocarboxamidesynthetaseRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome CDS1577195 714 + 0.453782
purD phosphoribosylglycinamide synthetaseRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome CDS561662 1311 - 0.518688
purE phosphoribosylaminoimidazole carboxylase, catalytic subunitRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; chromosome CDS1243503 525 - 0.558095
purF amidophosphoribosyltransferase; PRPP amidotransferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome CDS1774050 1518 + 0.47365
purH phosphoribosylaminoimidazolecarboxamideformyltransferaseRecName: Full=Bifunctional purine biosynthesis protein PurH; Includes: RecName: Full=Phosphoribosylaminoimidazolecarboxamide formyltransferase; EC=2.1.2.3; AltName: Full=AICAR transformylase; Includes: RecName: Full=IMP cyclohydrolase; EC=3.5.4.10; AltName: Full=ATIC; AltName: Full=IMP synthase; AltName: Full=Inosinicase; chromosome CDS563008 1635 - 0.510092
purK phosphoribosylaminoimidazole carboxylase, CO(2)-fixing subunitSubName: Full=Phosphoribosylaminoimidazole carboxylase ATPase subunit PurK; EC=4.1.1.21; SubName: Full=Phosphoribosylaminoimidazole carboxylase, CO(2)-fixing subunit; chromosome CDS1242442 1065 - 0.524883
purL phosphoribosylformyl-glycineamide synthetaseRecName: Full=Phosphoribosylformylglycinamidine synthase; Short=FGAM synthase; Short=FGAMS; EC=6.3.5.3; AltName: Full=Formylglycinamide ribotide amidotransferase; Short=FGARAT; AltName: Full=Formylglycinamide ribotide synthetase; chromosome CDS1451746 3891 + 0.533796
purM phosphoribosylaminoimidazole synthetaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; chromosome CDS1564139 1044 - 0.516284
purN phosphoribosylglycinamide formyltransferase 1SubName: Full=Phosphoribosylglycinamide formyltransferase 1; SubName: Full=Putative phosphoribosylglycinamide formyltransferase; EC=2.1.2.2; chromosome CDS1563386 639 - 0.505477
purT phosphoribosylglycinamide formyltransferase 2RecName: Full=Phosphoribosylglycinamide formyltransferase 2; Short=GART 2; EC=2.1.2.-; AltName: Full=5-phosphoribosylglycinamide transformylase 2; AltName: Full=Formate-dependent GAR transformylase; AltName: Full=GAR transformylase 2; chromosome CDS2794452 1182 + 0.531303
purU formyltetrahydrofolate deformylaseSubName: Full=Formyltetrahydrofolate deformylase; chromosome CDS2377153 753 + 0.443559
pyrB aspartate carbamoyltransferase, catalytic subunitRecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome CDS166338 936 + 0.483974
pyrC dihydro-orotaseRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS1927069 1047 + 0.495702
pyrD dihydro-orotate dehydrogenaseRecName: Full=Dihydroorotate dehydrogenase (quinone); EC=1.3.5.2; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase; chromosome CDS3039106 1011 - 0.433234
pyrE orotate phosphoribosyltransferaseRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome CDS102331 648 - 0.507716
pyrF orotidine-5'-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome CDS2280068 738 + 0.52168
pyrG CTP synthetaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome CDS911098 1638 + 0.486569
pyrH uridylate kinaseRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome CDS3446785 726 - 0.493113
pyrI aspartate carbamoyltransferase, regulatory subunitRecName: Full=Aspartate carbamoyltransferase regulatory chain; chromosome CDS167279 471 + 0.481953
tdk thymidine kinaseRecName: Full=Thymidine kinase; EC=2.7.1.21; chromosome CDS2370301 591 - 0.458545
thyA thymidylate synthetaseRecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome CDS3489497 795 - 0.466667
tmk thymidylate kinaseRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome CDS1946144 639 + 0.538341
udk uridine/cytidine kinaseRecName: Full=Uridine kinase; EC=2.7.1.48; AltName: Full=Cytidine monophosphokinase; AltName: Full=Uridine monophosphokinase; chromosome CDS2916138 681 - 0.436123
udp uridine phosphorylaseRecName: Full=Uridine phosphorylase; EC=2.4.2.3; chromosome CDS494956 807 + 0.505576
upp uracil phosphoribosyltransferaseRecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; chromosome CDS1565546 660 + 0.481818
y0107 putative transport protein, symporterSubName: Full=Putative transport protein, symporter; chromosome CDS115622 1437 + 0.505915
y0247 putative deoxyribose-phosphate aldolaseSubName: Full=Putative deoxyribose-phosphate aldolase; EC=4.1.2.4; chromosome CDS262949 702 + 0.482906
y0553 hypotheticalSubName: Full=Uncharacterized protein; chromosome CDS619983 1137 - 0.532102
y1185 putative alpha helical proteinSubName: Full=Methyl-accepting chemotaxis protein; SubName: Full=Putative alpha helical protein; chromosome CDS1329870 501 + 0.493014
y1307 putative deaminaseRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS1449259 603 + 0.533997
y1770 hypothetical proteinSubName: Full=Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; SubName: Full=Uncharacterized protein; chromosome CDS1952451 354 + 0.49435
y2338 putative chlorohydrolaseSubName: Full=Putative chlorohydrolase; chromosome CDS2573605 1425 - 0.494737
y2888 hypotheticalSubName: Full=ADP-ribose pyrophosphatase; SubName: Full=Uncharacterized protein; chromosome CDS3190918 537 + 0.487896
y3011 putative adenylate cyclaseSubName: Full=Adenylate cyclase 2; EC=4.6.1.1; SubName: Full=Putative adenylate cyclase; chromosome CDS3319460 540 - 0.433333
y3093 putative permeaseSubName: Full=Putative permease; chromosome CDS3403208 1359 + 0.491538
y3331 putative ribosomal proteinRecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; chromosome CDS3663573 672 + 0.52381
y3744 putative transport system permease proteinSubName: Full=Putative Na+ dependent nucleosidetransporter-family protein; SubName: Full=Putative transport system permease protein; chromosome CDS4163891 1308 - 0.504587
yscM Yop proteins translocation protein M homologRecName: Full=Yop proteins translocation protein M; AltName: Full=Low calcium response locus protein Q; pCD1 CDS3193 348 - 0.479885