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2024-05-03 22:16:24

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Agrobacterium tumefaciens str. C58, C58

Number of genes found: 181

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Agrobacterium tumefaciens str. C58, C58
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
AGR_C_104 AGR_C_104pchromosome CDS70987 399 + 0.566416
AGR_C_1055 AGR_C_1055pchromosome CDS581414 1335 - 0.605992
AGR_C_106 AGR_C_106pchromosome CDS71373 2187 + 0.552355
AGR_C_107 AGR_C_107pchromosome CDS73561 990 + 0.564646
AGR_C_1098 AGR_C_1098pchromosome CDS606940 1701 + 0.63786
AGR_C_1152 AGR_C_1152pchromosome CDS637284 1278 - 0.618936
AGR_C_1234 AGR_C_1234pchromosome CDS684401 459 - 0.6122
AGR_C_148 AGR_C_148pchromosome CDS101313 525 + 0.565714
AGR_C_1849 AGR_C_1849pchromosome CDS1001690 1407 - 0.622601
AGR_C_1950 AGR_C_1950pchromosome CDS1048341 417 - 0.616307
AGR_C_1986 AGR_C_1986pchromosome CDS1066771 1509 - 0.599072
AGR_C_2038 AGR_C_2038pchromosome CDS1090237 663 + 0.597285
AGR_C_2077 AGR_C_2077pchromosome CDS1113189 423 + 0.572104
AGR_C_209 AGR_C_209pchromosome CDS134418 438 + 0.573059
AGR_C_210 AGR_C_210pchromosome CDS134855 801 + 0.602996
AGR_C_2109 AGR_C_2109pchromosome CDS1128753 675 - 0.594074
AGR_C_211 AGR_C_211pchromosome CDS135652 780 + 0.620513
AGR_C_2111 AGR_C_2111pchromosome CDS1129424 1299 - 0.632794
AGR_C_2117 AGR_C_2117pchromosome CDS1134966 1524 + 0.600394
AGR_C_214 AGR_C_214pchromosome CDS136428 1317 + 0.625664
AGR_C_216 AGR_C_216pchromosome CDS138393 630 - 0.571429
AGR_C_218 AGR_C_218pchromosome CDS139118 978 - 0.609407
AGR_C_2233 AGR_C_2233pchromosome CDS1203524 1989 - 0.59628
AGR_C_2404 AGR_C_2404pchromosome CDS1298794 1293 - 0.615623
AGR_C_2407 AGR_C_2407pchromosome CDS1300083 1095 - 0.611872
AGR_C_2530 AGR_C_2530pchromosome CDS1363796 429 - 0.592075
AGR_C_2544 AGR_C_2544pchromosome CDS1369950 726 + 0.61157
AGR_C_2603 AGR_C_2603pchromosome CDS1403451 489 + 0.576687
AGR_C_2655 AGR_C_2655pchromosome CDS1433952 570 + 0.561404
AGR_C_2681 AGR_C_2681pchromosome CDS1448820 657 - 0.555556
AGR_C_2760 AGR_C_2760pchromosome CDS1487684 675 - 0.623704
AGR_C_2923 AGR_C_2923pchromosome CDS1573023 1137 - 0.601583
AGR_C_2984 AGR_C_2984pchromosome CDS1602323 1737 - 0.593552
AGR_C_3147 AGR_C_3147pchromosome CDS1699288 1281 - 0.603435
AGR_C_3180 AGR_C_3180pchromosome CDS1715837 618 + 0.587379
AGR_C_3183 AGR_C_3183pchromosome CDS1717120 3819 + 0.603561
AGR_C_3368 AGR_C_3368pchromosome CDS1817380 444 + 0.605856
AGR_C_3377 AGR_C_3377pchromosome CDS1822477 1353 + 0.616408
AGR_C_3382 AGR_C_3382pchromosome CDS1824658 765 + 0.586928
AGR_C_3385 AGR_C_3385pchromosome CDS1825787 624 + 0.600962
AGR_C_3393 AGR_C_3393pchromosome CDS1829669 2328 + 0.613832
AGR_C_3521 AGR_C_3521pchromosome CDS1903426 591 - 0.590525
AGR_C_3709 AGR_C_3709pchromosome CDS2005652 840 - 0.561905
AGR_C_389 AGR_C_389pchromosome CDS231800 765 + 0.585621
AGR_C_3938 AGR_C_3938pchromosome CDS2139772 1371 + 0.612691
AGR_C_3955 AGR_C_3955pchromosome CDS2150397 3561 + 0.613592
AGR_C_4031 AGR_C_4031pchromosome CDS2186105 957 + 0.598746
AGR_C_4069 AGR_C_4069pchromosome CDS2206820 597 - 0.599665
AGR_C_4147 AGR_C_4147pchromosome CDS2254161 624 + 0.588141
AGR_C_4165 AGR_C_4165pchromosome CDS2265825 1728 + 0.587963
AGR_C_4202 AGR_C_4202pchromosome CDS2284774 1470 + 0.606122
AGR_C_4204 AGR_C_4204pchromosome CDS2286438 2340 + 0.613248
AGR_C_4212 AGR_C_4212pchromosome CDS2292850 1311 + 0.59878
AGR_C_4225 AGR_C_4225pchromosome CDS2300653 501 - 0.59481
AGR_C_4302 AGR_C_4302pchromosome CDS2343162 1086 - 0.598527
AGR_C_4328 AGR_C_4328pchromosome CDS2356285 1521 + 0.615385
AGR_C_4442 AGR_C_4442pchromosome CDS2418725 1299 - 0.6097
AGR_C_4474 AGR_C_4474pchromosome CDS2433059 885 + 0.576271
AGR_C_4615 AGR_C_4615pchromosome CDS2519008 951 + 0.566772
AGR_C_480 AGR_C_480pchromosome CDS274872 1578 - 0.612167
AGR_C_4818 AGR_C_4818pchromosome CDS2640787 732 + 0.592896
AGR_C_482 AGR_C_482pchromosome CDS276533 639 - 0.593114
AGR_C_5117 AGR_C_5117pchromosome CDS2826128 1689 - 0.599171
AGR_C_515 AGR_C_515pchromosome CDS291364 768 - 0.622396
AGR_C_548 AGR_C_548pchromosome CDS306696 471 - 0.622081
AGR_C_570 AGR_C_570pchromosome CDS320183 705 - 0.602837
AGR_C_654 AGR_C_654pchromosome CDS369169 1002 - 0.5998
AGR_C_703 AGR_C_703pchromosome CDS393303 1182 + 0.598139
AGR_C_704 AGR_C_704pchromosome CDS394534 801 + 0.571785
AGR_C_764 AGR_C_764pchromosome CDS429307 1113 + 0.604672
AGR_C_861 AGR_C_861pchromosome CDS474062 1095 + 0.627397
AGR_L_1098 AGR_L_1098pchromosome CDS631248 966 - 0.580745
AGR_L_1261 AGR_L_1261pchromosome CDS717387 903 - 0.582503
AGR_L_1489 AGR_L_1489pchromosome CDS845351 690 - 0.572464
AGR_L_1498 AGR_L_1498pchromosome CDS852178 633 - 0.617694
AGR_L_1821 AGR_L_1821pchromosome CDS1034280 1383 - 0.600145
AGR_L_2157 AGR_L_2157pchromosome CDS1236779 1092 - 0.608059
AGR_L_2159 AGR_L_2159pchromosome CDS1237867 501 - 0.654691
AGR_L_2446 AGR_L_2446pchromosome CDS1414246 543 + 0.583794
AGR_L_3468 AGR_L_3468pchromosome CDS1991868 1509 + 0.61829
AGR_L_363 AGR_L_363pchromosome CDS212767 1497 - 0.60855
AGR_L_364 AGR_L_364pchromosome CDS214260 1203 - 0.61596
AGR_L_661 AGR_L_661pchromosome CDS388945 1062 + 0.635593
AGR_L_76 AGR_L_76pchromosome CDS45436 1038 - 0.61368
AGR_L_877 AGR_L_877pchromosome CDS502239 708 - 0.627119
AGR_L_883 AGR_L_883pchromosome CDS505301 1794 - 0.642698
AGR_L_885 AGR_L_885pchromosome CDS507091 921 - 0.635179
AGR_L_93GM AGR_L_93GMpchromosome CDS219339 1518 + 0.59552
AGR_pAT_703 AGR_pAT_703pAT CDS467936 1224 - 0.61683
AGR_pAT_76 AGR_pAT_76pAT CDS56632 312 - 0.625
Atu0097 conserved hypothetical proteinchromosome CDS101514 525 + 0.565714
Atu0326 conserved hypothetical proteinchromosome CDS320383 645 - 0.607752
Atu0597 conserved hypothetical proteinchromosome CDS581613 1362 - 0.603524
Atu1369 HIT family proteinchromosome CDS1363909 429 - 0.592075
Atu1440 conserved hypothetical proteinchromosome CDS1434065 570 + 0.561404
Atu1453 conserved hypothetical proteinchromosome CDS1448934 588 - 0.561224
Atu1834 mutT like proteinchromosome CDS1817494 444 + 0.605856
Atu1844 conserved hypothetical proteinchromosome CDS1825591 243 + 0.576132
Atu2370 hypothetical proteinchromosome CDS2343276 1086 - 0.598527
Atu3209 hypothetical proteinchromosome CDS223033 252 + 0.595238
Atu3935 hydrolasechromosome CDS1039130 1347 + 0.599852
Atu4109 conserved hypothetical proteinchromosome CDS1228716 690 + 0.572464
Atu4429 phosphoribosyltransferasechromosome CDS1571811 708 + 0.627119
Atu4694 chlorohydrolasechromosome CDS1853901 1518 - 0.59552
Atu4698 hydrolasechromosome CDS1859304 1194 + 0.616415
add adenosine deaminasechromosome CDS139319 978 - 0.609407
adeC adenine deaminasechromosome CDS2265939 1728 + 0.587963
adeC adenine deaminasechromosome CDS1567663 1794 + 0.642698
adk adenylate kinasechromosome CDS1903540 591 - 0.590525
allA ureidoglycolate hydrolasechromosome CDS2300767 501 - 0.59481
allA ureidoglycolate hydrolasechromosome CDS1403564 489 + 0.576687
amn AMP nucleosidasechromosome CDS1001800 1485 - 0.621549
apt adenine phosphoribosyltransferasechromosome CDS2206933 543 - 0.615101
carA carbamoylphosphate synthase small chainchromosome CDS2140050 1206 + 0.618574
carB carbamoylphosphate synthase large subunitchromosome CDS2150582 3489 + 0.61307
cdd cytidine deaminasechromosome CDS134652 405 + 0.572839
cmk cytidylate monophosphate kinasechromosome CDS1221946 633 + 0.617694
codA cytidine and deoxycytidylate deaminasechromosome CDS684600 459 - 0.6122
cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterasechromosome CDS1203636 1989 - 0.59628
dcd 2'-deoxycytidine 5'-triphosphate deaminasechromosome CDS429507 1113 + 0.604672
deoA thymidine phosphorylasechromosome CDS136629 1317 + 0.625664
deoC deoxyribose-phosphate aldolasechromosome CDS2028362 960 + 0.61875
deoC 2-deoxyribose-5-phosphate aldolasechromosome CDS135859 774 + 0.620155
deoD purine nucleoside phosphorylasechromosome CDS135056 801 + 0.602996
dgt deoxyguanosinetriphosphate triphosphohydrolasechromosome CDS1699402 1281 - 0.603435
dht dihydropyrimidinasechromosome CDS2356462 1458 + 0.611797
dut deoxyuridine 5'triphosphate nucleotidohydrolasechromosome CDS306896 471 - 0.622081
garS 5'-phosphoribosyl-5-aminoimidazole synthetasechromosome CDS1129534 1074 - 0.635009
gda guanine deaminasechromosome CDS2292964 1311 + 0.59878
gmk guanylate kinasechromosome CDS1090347 663 + 0.597285
gpt xanthine-guanine phosphoribosyltransferasechromosome CDS1715951 618 + 0.587379
guaA GMP synthasechromosome CDS275072 1578 - 0.612167
guaA GMP synthasechromosome CDS2640898 732 + 0.592896
guaA GMP synthasechromosome CDS232090 675 + 0.6
hpt hypoxanthine phosphoribosyltransferasechromosome CDS659968 543 - 0.583794
iunH inosine-uridine preferring nucleoside hydrolasechromosome CDS1573137 975 - 0.603077
iunH inosine-uridine preferring nucleoside hydrolasechromosome CDS1566746 921 + 0.635179
iunH inosine-uridine preferring nucleoside hydrolasechromosome CDS369369 945 - 0.601058
ndk nucleoside diphosphate kinasechromosome CDS1113299 423 + 0.572104
nrdE ribonucleoside-diphosphate reductase 2 alpha chainchromosome CDS1717234 3819 + 0.603561
nrdE ribonucleoside-diphosphate reductase 2 alpha chainchromosome CDS71679 2082 + 0.549952
nrdF ribonucleoside-diphosphate reductase 2 beta chainchromosome CDS73777 975 + 0.566154
nrdI NrdI protein involved in ribonucleotide reductionchromosome CDS71188 399 + 0.566416
nudF ADP-Ribose Pyrophosphatasechromosome CDS1048451 417 - 0.616307
pcaB 3-carboxy-cis,cis-muconate cycloisomerasechromosome CDS1684752 1062 - 0.635593
pfs 5'-methylthioadenosine/S-adenosylhomocysteinenuc leosidasechromosome CDS276733 639 - 0.593114
ppx exopolyphosphatasechromosome CDS1135076 1524 + 0.600394
ppx exopolyphosphatasechromosome CDS607814 1026 + 0.647173
prsA ribose-phosphate pyrophosphokinasechromosome CDS2186242 933 + 0.598071
purA adenylosuccinate synthetasechromosome CDS2418838 1299 - 0.6097
purB adenylosuccinate lyasechromosome CDS1822591 1353 + 0.616408
purC phosphoribosylaminoimidazole-succinocarboxamidesynthasechromosome CDS2519121 951 + 0.566772
purC phosphoribosylaminoimidazole-succinocarboxamidesynthasechromosome CDS1824772 765 + 0.586928
purD phosphoribosylamine--glycine ligasechromosome CDS637483 1278 - 0.618936
purE phosphoribosylaminoimidazole carboxylase catalytic subunitchromosome CDS836389 501 + 0.654691
purF amidophosphoribosyltransferasechromosome CDS1066881 1509 - 0.599072
purH bifunctional purine biosynthesis proteinchromosome CDS2826239 1617 - 0.600495
purK phosphoribosylaminoimidazole carboxylase, ATPase subunitchromosome CDS836901 1077 + 0.610028
purL phosphoribosylformylglycinamidine synthetase IIchromosome CDS1829783 2328 + 0.613832
purN 5'-phosphoribosylglycinamide formyltransferasechromosome CDS1128863 606 - 0.589109
purQ phosphoribosylformylglycinamidine synthase Ichromosome CDS1825901 624 + 0.600962
purU formyltetrahydrofolate deformylasechromosome CDS1356467 903 + 0.582503
purU formyltetrahydrofolate deformylasechromosome CDS1442543 966 + 0.580745
purU formyltetrahydrofolate deformylasechromosome CDS2433172 885 + 0.576271
pyrB aspartate carbamoyl transferasechromosome CDS1300196 942 - 0.610403
pyrC dihydroorotasechromosome CDS1298907 1293 - 0.615623
pyrC dihydroorotasechromosome CDS393503 1182 + 0.598139
pyrD dihydroorotate dehydrogenasechromosome CDS474262 1095 + 0.627397
pyrE orotate phosphoribosyltransferasechromosome CDS394734 801 + 0.571785
pyrF orotidine 5'-monophosphatechromosome CDS291564 708 - 0.625706
pyrG CTP synthasechromosome CDS1602437 1737 - 0.593552
pyrG CTP synthaseAT CDS467539 1224 - 0.61683
pyrH uridylate kinasechromosome CDS1370063 726 + 0.61157
tdk thymidine kinasechromosome CDS2254407 492 + 0.605691
thyA thymidylate synthasechromosome CDS2005765 795 - 0.566038
tmk thymydilate kinasechromosome CDS1487798 567 - 0.622575
trzA N-ethylammeline chlorohydrolasechromosome CDS1860497 1494 + 0.608434
upp uracil phosphoribosyltransferasechromosome CDS138594 630 - 0.571429
uraA uracil transport proteinchromosome CDS81380 1323 - 0.622071
xdhA xanthine dehydrogenasechromosome CDS2284888 1470 + 0.606122
xdhB xanthine dehydrogenase C-terminal subunitchromosome CDS2286639 2253 + 0.61518