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2024-05-21 02:51:29

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Salmonella typhimurium LT2, LT2; SGSC 1412; ATCC 700720

Number of genes found: 84

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Salmonella typhimurium LT2, LT2; SGSC 1412; ATCC 700720
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
STM0033 putative 5'-nucleotidaseSubName: Full=Putative 5-nucleotidase; chromosome CDS37103 1572 - 0.468193
STM1330 putative DNA/RNA non-specific endonucleaseSubName: Full=Putative DNA/RNA non-specific endonuclease; chromosome CDS1408531 855 + 0.51345
STM1552 putative cytoplasmic proteinSubName: Full=Putative cytoplasmic protein; chromosome CDS1627919 909 + 0.424642
STM3167 putative diadenosine tetraphosphate (Ap4A) hydrolaseSubName: Full=Putative diadenosine tetraphosphate (Ap4A) hydrolase; chromosome CDS3327928 456 + 0.480263
STM3333 putative purine-cytosine permeaseSubName: Full=Putative purine-cytosine permease; chromosome CDS3501838 1254 + 0.555024
STM3334 putative cytosine deaminaseSubName: Full=Putative cytosine deaminase; EC=3.5.4.1; chromosome CDS3503078 1281 + 0.555035
STM3631 putative xanthine permeaseSubName: Full=Putative xanthine permease; chromosome CDS3816585 1326 - 0.550528
STM4104 putative 5'-nucleotidaseSubName: Full=Putative 5-nucleotidase; chromosome CDS4316777 1557 + 0.516378
add adenosine deaminaseRecName: Full=Adenosine deaminase; EC=3.5.4.4; AltName: Full=Adenosine aminohydrolase; chromosome CDS1537496 1002 - 0.550898
adk adenylate kinaseRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS546041 645 + 0.545736
allA ureidoglycolate hydrolaseRecName: Full=Ureidoglycolate lyase; EC=4.3.2.3; AltName: Full=Ureidoglycolatase; chromosome CDS576003 483 + 0.503106
allB allantoinaseRecName: Full=Allantoinase; EC=3.5.2.5; AltName: Full=Allantoin-utilizing enzyme; chromosome CDS583958 1362 + 0.516887
allP putative NCS1 family, allantoin transport proteinSubName: Full=Putative NCS1 family, allantoin transport protein; chromosome CDS582566 1314 + 0.459665
amn AMP nucleosidaseSubName: Full=AMP nucleosidase; EC=3.2.2.4; chromosome CDS2091307 1455 - 0.541581
apt adenine phosphoribosyltransferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome CDS540242 552 + 0.538043
carA carbamoyl-phosphate synthetase, glutamine-hydrolysing small subunitRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS75880 1149 + 0.553525
carB carbamoyl-phosphate synthase, large subunitRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome CDS77047 3228 + 0.591078
cdd cytidine/deoxycytidine deaminaseRecName: Full=Cytidine deaminase; EC=3.5.4.5; AltName: Full=Cytidine aminohydrolase; Short=CDA; chromosome CDS2279166 885 + 0.564972
cmk cytidine monophosphate (CMP) kinaseRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; chromosome CDS1064994 684 + 0.557018
cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesteraseRecName: Full=2,3-cyclic-nucleotide 2-phosphodiesterase/3-nucleotidase; EC=3.1.3.6; EC=3.1.4.16; Flags: Precursor; chromosome CDS4639560 1944 - 0.51749
cyaA adenylate cyclaseRecName: Full=Adenylate cyclase; EC=4.6.1.1; AltName: Full=ATP pyrophosphate-lyase; AltName: Full=Adenylyl cyclase; chromosome CDS4146367 2547 + 0.543384
dcd dUTPaseRecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase; EC=3.5.4.13; chromosome CDS2206886 582 - 0.597938
deoA thymidine phosphorylaseRecName: Full=Thymidine phosphorylase; EC=2.4.2.4; AltName: Full=TdRPase; chromosome CDS4822334 1323 + 0.558579
deoC 2-deoxyribose-5-phosphate aldolaseRecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase; chromosome CDS4821413 798 + 0.542607
deoD purine-nucleoside phosphorylaseRecName: Full=Purine nucleoside phosphorylase DeoD-type; Short=PNP; EC=2.4.2.1; chromosome CDS4825141 720 + 0.547222
dgt deoxyguanosine triphosphate triphosphohydrolaseRecName: Full=Deoxyguanosinetriphosphate triphosphohydrolase; Short=dGTP triphosphohydrolase; Short=dGTPase; EC=3.1.5.1; chromosome CDS242845 1518 + 0.490777
dut deoxyuridinetriphosphataseRecName: Full=Deoxyuridine 5-triphosphate nucleotidohydrolase; Short=dUTPase; EC=3.6.1.23; AltName: Full=dUTP pyrophosphatase; chromosome CDS3924722 456 + 0.557018
gmk guanylate kinaseRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome CDS3933098 624 + 0.496795
gppA guanosine pentaphosphataseRecName: Full=Guanosine-5-triphosphate,3-diphosphate pyrophosphatase; EC=3.6.1.40; AltName: Full=Guanosine pentaphosphate phosphohydrolase; AltName: Full=pppGpp-5-phosphohydrolase; chromosome CDS4121827 1482 - 0.557355
gpt guanine-hypoxanthine phosphoribosyltransferaseRecName: Full=Xanthine phosphoribosyltransferase; EC=2.4.2.22; AltName: Full=Xanthine-guanine phosphoribosyltransferase; Short=XGPRT; chromosome CDS362679 459 + 0.53159
guaA GMP synthetaseRecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome CDS2622805 1578 - 0.558302
guaC GMP reductaseRecName: Full=GMP reductase; EC=1.7.1.7; AltName: Full=Guanosine 5-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase; chromosome CDS164053 1044 + 0.531609
hpt hypoxanthine phosphoribosyltransferaseRecName: Full=Hypoxanthine phosphoribosyltransferase; Short=HPRT; EC=2.4.2.8; chromosome CDS200816 537 + 0.502793
miaE hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNARecName: Full=tRNA-(ms[2]io[6]A)-hydroxylase; EC=1.-.-.-; chromosome CDS4713345 813 + 0.543665
ndk nucleoside diphosphate kinaseRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome CDS2660070 432 - 0.555556
nrdA ribonucleoside diphosphate reductase 1, alpha subunitRecName: Full=Ribonucleoside-diphosphate reductase 1 subunit alpha; EC=1.17.4.1; AltName: Full=Protein B1; AltName: Full=Ribonucleoside-diphosphate reductase 1 R1 subunit; AltName: Full=Ribonucleotide reductase 1; chromosome CDS2381400 2286 + 0.534558
nrdB ribonucleoside-diphosphate reductase 1, beta subunitRecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta; EC=1.17.4.1; AltName: Full=Protein B2; AltName: Full=Protein R2; AltName: Full=Ribonucleotide reductase 1; chromosome CDS2383798 1131 + 0.513705
nrdD anaerobic ribonucleoside-triphosphate reductaseRecName: Full=Anaerobic ribonucleoside-triphosphate reductase; EC=1.17.4.2; chromosome CDS4692553 2139 - 0.555867
nrdE ribonucleoside diphosphate reductase 2, alpha subunitRecName: Full=Ribonucleoside-diphosphate reductase 2 subunit alpha; EC=1.17.4.1; AltName: Full=R1E protein; AltName: Full=Ribonucleotide reductase 2; chromosome CDS2952482 2145 + 0.542191
nrdF ribonucleoside-diphosphate reductase 2, beta subunitRecName: Full=Ribonucleoside-diphosphate reductase 2 subunit beta; EC=1.17.4.1; AltName: Full=R2F protein; AltName: Full=Ribonucleotide reductase 2; chromosome CDS2954637 960 + 0.495833
nrdI stimulates ribonucleotide reductionRecName: Full=Protein NrdI; chromosome CDS2952099 411 + 0.569343
nupC NUP family nucleoside transport proteinSubName: Full=NUP family nucleoside transport protein; chromosome CDS2525303 1203 + 0.507897
pfs 5'-methylthioadenosine/S-adenosylhomocysteinenuc leosidaseRecName: Full=5-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Short=MTA/SAH nucleosidase; Short=MTAN; EC=3.2.2.9; AltName: Full=5-methylthioadenosine nucleosidase; Short=MTA nucleosidase; AltName: Full=S-adenosylhomocysteine nucleosidase; Short=AdoHcy nucleosidase; Short=SAH nucleosidase; Short=SRH nucleosidase; chromosome CDS242062 699 - 0.569385
ppx exopolyphosphataseRecName: Full=Exopolyphosphatase; Short=ExopolyPase; EC=3.6.1.11; AltName: Full=Metaphosphatase; chromosome CDS2617008 1542 + 0.540208
prsA phosphoribosylpyrophosphate synthetaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; Short=P-Rib-PP synthase; Short=PRPP synthase; chromosome CDS1877761 948 + 0.545359
purA adenylosuccinate synthetaseRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome CDS4609096 1299 + 0.541955
purB adenylosuccinate lyaseSubName: Full=Adenylosuccinate lyase; EC=4.3.2.2; chromosome CDS1319487 1371 - 0.514953
purC phosphoribosylaminoimidazole-succinocarboxamidesynthetaseRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome CDS2602104 714 - 0.522409
purD phosphoribosylglycinamide synthetaseRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome CDS4391161 1290 - 0.610853
purE phosphoribosylaminoimidazole carboxylase = AIR carboxylase, catalytic subunitRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; chromosome CDS597116 510 - 0.601961
purF amidophosphoribosyltransferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome CDS2474336 1518 - 0.536232
purG phosphoribosylformylglycinamidine synthetaseRecName: Full=Phosphoribosylformylglycinamidine synthase; Short=FGAM synthase; Short=FGAMS; EC=6.3.5.3; AltName: Full=Formylglycinamide ribotide amidotransferase; Short=FGARAT; AltName: Full=Formylglycinamide ribotide synthetase; chromosome CDS2708254 3888 - 0.592335
purH phosphoribosylaminoimidazolecarboxamideformyltransferaseRecName: Full=Bifunctional purine biosynthesis protein PurH; Includes: RecName: Full=Phosphoribosylaminoimidazolecarboxamide formyltransferase; EC=2.1.2.3; AltName: Full=AICAR transformylase; Includes: RecName: Full=IMP cyclohydrolase; EC=3.5.4.10; AltName: Full=ATIC; AltName: Full=IMP synthase; AltName: Full=Inosinicase; chromosome CDS4392462 1590 - 0.572327
purK phosphoribosylaminoimidazole carboxylase = AIR carboxylase, CO(2)-fixing subunitSubName: Full=Phosphoribosylaminoimidazole carboxylase = AIR carboxylase, CO(2)-fixing subunit; EC=4.1.1.21; chromosome CDS596052 1068 - 0.592697
purM phosphoribosylaminoimidazole synthetaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; chromosome CDS2613073 1038 + 0.552987
purN polyphosphate kinaseSubName: Full=Polyphosphate kinase; EC=2.1.2.2; chromosome CDS2614110 639 + 0.56025
purT phosphoribosylglycinamide formyltransferase 2RecName: Full=Phosphoribosylglycinamide formyltransferase 2; Short=GART 2; EC=2.1.2.-; AltName: Full=5-phosphoribosylglycinamide transformylase 2; AltName: Full=Formate-dependent GAR transformylase; AltName: Full=GAR transformylase 2; chromosome CDS1975664 1179 + 0.568278
purU formyltetrahydrofolate hydrolaseSubName: Full=Formyltetrahydrofolate hydrolase; EC=3.5.1.10; chromosome CDS1851568 843 + 0.504152
pyrB aspartate carbamoyltransferase, catalytic subunitRecName: Full=Aspartate carbamoyltransferase catalytic chain; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome CDS4703970 936 - 0.549145
pyrC dihydro-orotaseRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS1248515 1047 - 0.539637
pyrD dihydro-orotate oxidaseRecName: Full=Dihydroorotate dehydrogenase (quinone); EC=1.3.5.2; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase; chromosome CDS1146961 1011 + 0.480712
pyrE orotate phosphoribosyltransferaseRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome CDS3925959 642 - 0.540498
pyrF orotidine-5'-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome CDS1800587 738 - 0.565041
pyrG CTP synthetaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome CDS3098745 1638 - 0.523199
pyrH uridylate kinaseRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome CDS256276 726 + 0.538567
pyrI aspartate carbamoyltransferase, regulatory subunitRecName: Full=Aspartate carbamoyltransferase regulatory chain; chromosome CDS4703496 462 - 0.489177
rihC putative purine nucleoside hydrolaseRecName: Full=Non-specific ribonucleoside hydrolase RihC; EC=3.2.-.-; AltName: Full=Purine/pyrimidine ribonucleoside hydrolase; chromosome CDS60164 921 + 0.565689
tdk thymidine kinaseRecName: Full=Thymidine kinase; EC=2.7.1.21; chromosome CDS1846003 618 - 0.488673
thyA thymidylate synthetaseRecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome CDS3158017 795 - 0.519497
tmk thymidylate kinaseRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome CDS1283624 642 + 0.577882
udk uridine/cytidine kinaseRecName: Full=Uridine kinase; EC=2.7.1.48; AltName: Full=Cytidine monophosphokinase; AltName: Full=Uridine monophosphokinase; chromosome CDS2207558 642 - 0.468847
udp uridine phosphorylaseRecName: Full=Uridine phosphorylase; Short=UPase; Short=UrdPase; EC=2.4.2.3; chromosome CDS4174864 762 + 0.56168
upp uracil phosphoribosyltransferaseRecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; chromosome CDS2612033 627 - 0.532695
uraA NCS2 family uracil transport proteinSubName: Full=NCS2 family uracil transport protein; chromosome CDS2610656 1290 - 0.560465
ushA UDP-sugar hydrolase 5'-nucleotidaseRecName: Full=Silent protein UshA(0); Flags: Precursor; chromosome CDS553634 1653 + 0.517241
xapA xanthosine phosphorylaseRecName: Full=Purine nucleoside phosphorylase; EC=2.4.2.1; AltName: Full=Inosine-guanosine phosphorylase; chromosome CDS2534858 834 - 0.532374
ybbY putative transport proteinSubName: Full=Putative transport protein; chromosome CDS585378 1299 + 0.510393
ybeK putative purine nucleoside hydrolaseRecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA; EC=3.2.-.-; AltName: Full=Cytidine/uridine-specific hydrolase; chromosome CDS725558 936 - 0.58547
ycfF putative protein kinase C inhibitorSubName: Full=Uncharacterized protein; chromosome CDS1290403 360 + 0.508333
yfeJ putative GMP synthaseRecName: Full=Putative glutamine amidotransferase-like protein YfeJ; chromosome CDS2549810 720 + 0.55
yfhC putative cytosine/adenosine deaminaseRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS2713992 552 - 0.567029
yggV putative xanthosine triphosphate pyrophosphataseRecName: Full=dITP/XTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-canonical purine NTP pyrophosphatase; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; chromosome CDS3262528 594 + 0.553872
yicE putative NCS2 family purine/xanthine transport proteinSubName: Full=Putative NCS2 family purine/xanthine transport protein; chromosome CDS3941252 1392 + 0.575431
ynfC putative inner membrane lipoproteinRecName: Full=UPF0257 lipoprotein YnfC; Flags: Precursor; chromosome CDS1579950 720 + 0.506944