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2024-05-19 05:30:24

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Shigella flexneri 2a str. 301, 301

Number of genes found: 79

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella flexneri 2a str. 301, 301
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
add SF1648 adenosine deaminasechromosome CDS1678949 1002 + 0.53493
adk SF0419 adenylate kinasechromosome CDS433700 645 + 0.516279
amn SF2053 AMP nucleosidasechromosome CDS2072413 1455 + 0.494845
apt SF0414 adenine phosphoribosyltransferasechromosome CDS427943 552 + 0.536232
carA SF0029 carbamoyl-phosphate synthetase, glutamine (small) subunitchromosome CDS29081 1149 + 0.534378
carB SF0030 carbamoyl-phosphate synthase large subunitchromosome CDS30247 3222 + 0.557107
cdd SF2228 cytidine/deoxycytidine deaminasechromosome CDS2254667 885 + 0.544633
cmk SF0906 cytidylate kinasechromosome CDS944992 684 + 0.538012
cpdB SF4273 2:3-cyclic-nucleotide 2-phosphodiesterasechromosome CDS4451416 1944 + 0.49537
cyaA SF3878 adenylate cyclasechromosome CDS3999520 2547 + 0.522968
dcd SF2129 2-deoxycytidine 5-triphosphate deaminasechromosome CDS2147172 582 - 0.599656
deoA SF4414 thymidine phosphorylasechromosome CDS4584879 1323 + 0.554044
deoC SF4413 2-deoxyribose-5-phosphate aldolasechromosome CDS4583973 780 + 0.55
deoD SF4416 purine-nucleoside phosphorylasechromosome CDS4587533 720 + 0.529167
dgt SF0152 deoxyguanosine triphosphate triphosphohydrolasechromosome CDS170892 1386 + 0.480519
dut SF3679 deoxyuridinetriphosphatasechromosome CDS3784243 459 + 0.546841
gmk SF3688 guanylate kinasechromosome CDS3791744 624 + 0.490385
gppA SF3852 guanosine pentaphosphatase, exopolyphosphatasechromosome CDS3971312 1485 - 0.535354
gpt SF0286 guanine-hypoxanthine phosphoribosyltransferasechromosome CDS304307 459 + 0.520697
guaA SF2553 GMP synthetase (glutamine-hydrolyzing)chromosome CDS2620411 1578 - 0.539924
guaC SF0101 GMP reductasechromosome CDS111946 1044 + 0.517241
hpt SF0122 hypoxanthine phosphoribosyltransferasechromosome CDS139510 549 + 0.499089
ndk SF2564 nucleoside diphosphate kinasechromosome CDS2633886 432 - 0.525463
nrdA SF2316 ribonucleoside diphosphate reductase 1, alpha subunit, B1chromosome CDS2361619 2286 + 0.536308
nrdB SF2317 ribonucleoside-diphosphate reductase 1, beta subunit, B2chromosome CDS2364099 1170 + 0.506838
nrdD SF4252 anaerobic ribonucleoside-triphosphate reductasechromosome CDS4424458 2139 + 0.535764
nrdE SF2703 ribonucleoside-diphosphate reductase 2, alpha subunitchromosome CDS2775281 2106 + 0.519468
nrdF SF2704 ribonucleoside-diphosphate reductase 2, beta chainchromosome CDS2777396 960 + 0.486458
nrdI SF2702 orf, conserved hypothetical proteinchromosome CDS2774859 411 + 0.559611
nupC SF2458 permease of transport system for 3 nucleosideschromosome CDS2515881 1203 + 0.495428
pfs SF0151 orf, conserved hypothetical proteinchromosome CDS170110 699 - 0.529328
ppx SF2546 exopolyphosphatasechromosome CDS2613299 1542 + 0.510376
prsA SF1210 phosphoribosylpyrophosphate synthetasechromosome CDS1257809 948 - 0.529536
purA SF4332 adenylosuccinate synthetasechromosome CDS4509506 1299 + 0.538106
purB SF1150 adenylosuccinate lyasechromosome CDS1191800 1371 - 0.524435
purC SF2519 phosphoribosylaminoimidazole-succinocarboxamide synthetase, SAICAR synthetasechromosome CDS2584963 714 - 0.521008
purD SF4077 phosphoribosylglycinamide synthetase, GAR synthetasechromosome CDS4223603 1290 - 0.58062
purE SF0454 phosphoribosylaminoimidazole carboxylase; AIR carboxylase, catalytic subunitchromosome CDS471114 510 - 0.594118
purF SF2388 amidophosphoribosyltransferase, PRPP amidotransferasechromosome CDS2436833 1518 - 0.528327
purH SF4078 phosphoribosylaminoimidazolecarboxamide formyltransferase, AICAR formyltransferase; IMP cyclohydrolasechromosome CDS4224904 1590 - 0.560377
purK SF0453 phosphoribosylaminoimidazole carboxylase; AIR carboxylase, CO(2)-fixing subunitchromosome CDS470050 1068 - 0.562734
purL SF2604 phosphoribosylformyl-glycineamide synthetase, FGAM synthetasechromosome CDS2676527 3888 - 0.566101
purM SF2543 phosphoribosylaminoimidazole synthetase, AIR synthetasechromosome CDS2609366 1053 + 0.536562
purN SF2544 phosphoribosylglycinamide formyltransferase 1chromosome CDS2610418 639 + 0.535211
purT SF1859 phosphoribosylglycinamide formyltransferase 2chromosome CDS1894754 1179 + 0.537744
purU SF1232 formyltetrahydrofolate deformylasechromosome CDS1282821 843 - 0.47331
pyrB SF4245 aspartate carbamoyltransferase, catalytic subunitchromosome CDS4414723 936 + 0.534188
pyrC SF1068 dihydro-orotasechromosome CDS1109322 1047 - 0.531041
pyrD SF0946 dihydro-orotate dehydrogenasechromosome CDS991835 1011 + 0.467854
pyrE SF3681 orotate phosphoribosyltransferasechromosome CDS3785441 642 - 0.528037
pyrF SF1285 orotidine-5-phosphate decarboxylasechromosome CDS1336204 738 + 0.5271
pyrG SF2795 CTP synthetasechromosome CDS2867651 1638 - 0.514652
pyrH SF0161 uridylate kinasechromosome CDS182799 726 + 0.526171
pyrI SF4246 aspartate carbamoyltransferase, regulatory subunitchromosome CDS4415671 462 + 0.47619
tdk SF1238 thymidine kinasechromosome CDS1288566 618 + 0.423948
thyA SF2837 thymidylate synthetasechromosome CDS2924723 795 - 0.513208
tmk SF1102 thymidylate kinasechromosome CDS1142839 642 + 0.537383
udk SF2130 uridine/cytidine kinasechromosome CDS2147845 642 - 0.487539
udp SF3909 uridine phosphorylasechromosome CDS4029571 762 + 0.536745
upp SF2542 uracil phosphoribosyltransferasechromosome CDS2608431 627 - 0.5311
uraA SF2541 uracil transport proteinchromosome CDS2607056 1290 - 0.517829
ushA SF0425 UDP-sugar hydrolase (5-nucleotidase)chromosome CDS441335 1653 + 0.507562
ushA CP0185 UshA, probable periplasmic UDP-sugar hydrolasepCP301 CDS155137 1653 + 0.404719
yaaF SF0027 orf, conserved hypothetical proteinchromosome CDS26723 915 + 0.557377
ybbT SF0444 orf, conserved hypothetical proteinchromosome CDS462182 483 + 0.513458
ybeK SF0630 putative tRNA synthetasechromosome CDS666108 936 + 0.511752
ycdG SF1009 putative transport proteinchromosome CDS1056571 1395 - 0.541219
ycfF SF1107 orf, conserved hypothetical proteinchromosome CDS1149602 360 + 0.502778
yeiJ SF2246 putative transport system permease proteinchromosome CDS2275324 1251 - 0.502798
yeiK SF2247 orf, conserved hypothetical proteinchromosome CDS2276674 942 - 0.515924
yeiM SF2249 putative transport system permease proteinchromosome CDS2278511 1251 - 0.511591
yfhC SF2606 putative deaminasechromosome CDS2682226 537 - 0.540037
ygfU SF2874 putative permeasechromosome CDS2965214 1518 + 0.485507
yggV SF2945 putative ribosomal proteinchromosome CDS3034976 594 + 0.557239
yghR SF3031 orf, conserved hypothetical proteinchromosome CDS3127771 759 - 0.532279
yghS SF3032 orf, conserved hypothetical proteinchromosome CDS3128561 714 - 0.495798
yghT SF3033 orf, conserved hypothetical proteinchromosome CDS3129448 693 + 0.473304
yicE SF3694 putative transport proteinchromosome CDS3799126 1392 + 0.550287
yicP SF3796 probable adenine deaminase (synthesis xanthine)chromosome CDS3905700 1767 - 0.546689