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2024-05-05 13:52:52

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Silicibacter pomeroyi DSS-3, DSS-3

Number of genes found: 86

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Silicibacter pomeroyi DSS-3, DSS-3
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SPO3045 glutamine amidotransferase, class Ichromosome CDS3256591 804 - 0.624378
NA SPOA0205 serine protease, subtilase familymegaplasmid CDS221560 2766 - 0.69812
NA SPO0294 hydrolase, NUDIX familychromosome CDS308364 420 - 0.67381
NA SPOA0083 hypothetical proteinmegaplasmid CDS79377 1104 - 0.499094
NA SPO0763 glutamine amidotransferase, class Ichromosome CDS794968 714 - 0.659664
NA SPO2653 dihydroorotase, homodimeric typechromosome CDS2807766 1041 + 0.654179
NA SPO2957 hydroxydechloroatrazine ethylaminohydrolase, putativechromosome CDS3156593 1335 - 0.674906
NA SPO1117 phosphatase, Ppx/GppA familychromosome CDS1173336 1545 - 0.67055
NA SPO2904 Ser/Thr protein phosphatase/nucleotidase, putativechromosome CDS3105486 1575 - 0.631111
NA SPO0874 xanthine/uracil permease family proteinchromosome CDS930939 1413 + 0.646143
NA SPO2956 guanine deaminase, putativechromosome CDS3155229 1284 + 0.654206
NA SPO0819 amidohydrolase domain proteinchromosome CDS851411 1167 + 0.646101
NA SPO0007 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 familychromosome CDS5683 615 - 0.642276
NA SPO0394 conserved hypothetical proteinchromosome CDS405948 192 - 0.614583
NA SPO2983 cytidine and deoxycytidylate deaminase family proteinchromosome CDS3180552 480 - 0.729167
NA SPO0284 dihydroorotase, multifunctional complex typechromosome CDS296987 1290 - 0.667442
NA SPO2987 lipoprotein, putativechromosome CDS3184553 963 + 0.672897
NA SPO2498 2''-deoxycytidine 5''-triphosphate deaminase, homologchromosome CDS2645535 1080 + 0.646296
NA SPO2505 deoxyguanosinetriphosphate triphosphohydrolase, putativechromosome CDS2652350 1158 - 0.658031
NA SPO2806 cytosine deaminase, putativechromosome CDS2995007 1293 + 0.655839
NA SPO1859 phosphatase, Ppx/GppA familychromosome CDS1977989 1113 - 0.667565
NA SPOA0012 DNA topology modulation kinase FlaR, putativemegaplasmid CDS10680 513 + 0.62768
NA SPO3194 ribonucleoside-diphosphate reductase, putativechromosome CDS3405491 2283 + 0.638195
NA SPO1071 glutamine amidotransferase, class-Ichromosome CDS1127009 735 - 0.665306
NA SPO1301 glutamine amidotransferase, class Ichromosome CDS1365921 681 - 0.638767
NA SPO1897 conserved hypothetical proteinchromosome CDS2022105 1233 + 0.665856
NA SPO3542 2`,3`-cyclic-nucleotide 2`-phosphodiesterase, putativechromosome CDS3752853 1872 + 0.660791
NA SPO1532 hypothetical proteinchromosome CDS1613519 708 - 0.675141
NA SPO2113 hypothetical proteinchromosome CDS2250313 924 + 0.632035
NA SPO1386 HIT family proteinchromosome CDS1453104 423 + 0.640662
add SPO2927 adenosine deaminasechromosome CDS3125593 1002 - 0.665669
ade SPO3746 adenine deaminasechromosome CDS3957066 1779 - 0.66217
adk-1 SPO0507 adenylate kinasechromosome CDS504909 642 + 0.637072
adk-2 SPO1812 adenylate kinasechromosome CDS1929739 669 - 0.674141
allA SPO0873 Ureidoglycolate hydrolasechromosome CDS930384 489 + 0.666667
amn SPO3745 AMP nucleosidasechromosome CDS3955606 1464 - 0.64071
apt SPO3066 adenine phosphoribosyltransferasechromosome CDS3274764 540 + 0.598148
carA SPO1377 carbamoyl-phosphate synthase, small subunitchromosome CDS1443878 1167 - 0.652099
carB SPO0923 carbamoyl-phosphate synthase, large subunitchromosome CDS977565 3369 - 0.646186
cdd SPO2930 cytidine deaminasechromosome CDS3129113 393 - 0.666667
cmk SPOA0017 cytidylate kinasemegaplasmid CDS14273 618 + 0.679612
deoA SPO2929 thymidine phosphorylasechromosome CDS3127799 1311 - 0.681922
deoC SPO3367 deoxyribose-phosphate aldolasechromosome CDS3567556 834 + 0.664269
deoD SPO0366 purine nucleoside phosphorylasechromosome CDS379410 711 - 0.616034
dut SPO0409 deoxyuridine 5'-triphosphate nucleotidohydrolasechromosome CDS421423 456 + 0.684211
fhs-1 SPO1557 formate--tetrahydrofolate ligasechromosome CDS1646655 1677 + 0.641622
fhs-2 SPO3103 formate--tetrahydrofolate ligasechromosome CDS3313292 1677 - 0.642815
gmk SPO1945 guanylate kinasechromosome CDS2074509 642 + 0.624611
gpt SPO2143 xanthine-guanine phosphoribosyltransferasechromosome CDS2277802 516 + 0.643411
guaA SPO2109 GMP synthasechromosome CDS2245651 1560 + 0.633974
hpt SPO2097 hypoxanthine phosphoribosyltransferasechromosome CDS2234645 543 + 0.60221
hutF SPO2194 formiminoglutamate deiminasechromosome CDS2333251 1362 + 0.687225
hydA SPO1783 D-hydantoinasechromosome CDS1899626 1455 + 0.626117
iunH SPO2470 inosine-uridine preferring nucleoside hydrolasechromosome CDS2622032 942 + 0.661359
mtaP SPO3060 methylthioadenosine phosphorylasechromosome CDS3270937 873 + 0.679267
ndk SPO2444 nucleoside diphosphate kinasechromosome CDS2597384 423 - 0.624114
nrdJ SPO2136 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependentchromosome CDS2270351 3645 - 0.622771
pcaB SPOA0432 3-carboxy-cis,cis-muconate cycloisomerasemegaplasmid CDS479797 1338 - 0.709268
prs SPO3159 ribose-phosphate pyrophosphokinasechromosome CDS3366292 1020 + 0.617647
purA SPO1318 adenylosuccinate synthetasechromosome CDS1380100 1293 - 0.655839
purB SPO2305 adenylosuccinate lyasechromosome CDS2441408 1305 + 0.631418
purC SPO1887 phosphoribosylaminoimidazole-succinocarboxamidesynthasechromosome CDS2011211 756 + 0.607143
purD SPO1345 phosphoribosylamine--glycine ligasechromosome CDS1405900 1263 + 0.672209
purE SPO0893 phosphoribosylaminoimidazole carboxylase, catalytic subunitchromosome CDS949706 489 - 0.699386
purF SPO2677 amidophosphoribosyltransferasechromosome CDS2831183 1473 + 0.633401
purH SPO3374 bifunctional purine biosynthesis protein PurHchromosome CDS3575518 1590 - 0.660377
purK SPO0892 phosphoribosylaminoimidazole carboxylase, ATPase subunitchromosome CDS948640 1074 - 0.675978
purL SPO1870 phosphoribosylformylglycinamidine synthase IIchromosome CDS1988722 2160 - 0.658333
purM SPO2169 phosphoribosylformylglycinamidine cyclo-ligasechromosome CDS2305025 1047 - 0.673352
purN SPO2168 phosphoribosylglycinamide formyltransferasechromosome CDS2304432 597 - 0.676717
purQ SPO1890 phosphoribosylformylglycinamidine synthase Ichromosome CDS2013443 669 + 0.651719
purS SPO1888 phosphoribosylformylglycinamidine synthase, PurS proteinchromosome CDS2012153 231 + 0.619048
pyrB SPO0287 aspartate carbamoyltransferasechromosome CDS299165 936 - 0.633547
pyrD SPO2907 dihydroorotate dehydrogenasechromosome CDS3107947 1053 + 0.689459
pyrE SPO2654 orotate phosphoribosyltransferasechromosome CDS2808884 678 + 0.634218
pyrF SPO3278 orotidine 5'-phosphate decarboxylasechromosome CDS3476646 735 + 0.661224
pyrG SPO1312 CTP synthasechromosome CDS1375919 1644 - 0.629562
pyrH SPO1662 uridylate kinasechromosome CDS1770258 756 + 0.636243
soxB SPO0997 sulfur oxidation B proteinchromosome CDS1047943 1704 + 0.633216
soxX SPO0993 monoheme cytochrome c SoxXchromosome CDS1045605 486 + 0.658436
tdk SPO0914 thymidine kinasechromosome CDS968104 597 - 0.646566
thyX SPO1273 thymidylate synthase, flavin-dependentchromosome CDS1340119 978 + 0.619632
tmk SPO2740 thymidylate kinasechromosome CDS2932291 636 + 0.663522
upp SPO2926 uracil phosphoribosyltransferasechromosome CDS3124964 633 - 0.635071
xdhA SPO0654 xanthine dehydrogenase, A subunitchromosome CDS676362 1386 - 0.657287
xdhB SPO0653 xanthine dehydrogenase, B subunitchromosome CDS674035 2331 - 0.667954