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2024-05-19 10:28:48

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Staphylococcus epidermidis RP62A phage SP-beta

Number of genes found: 75

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Staphylococcus epidermidis RP62A phage SP-beta
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA SERP1037 nucleoside diphosphate kinaseRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome CDS1083213 450 - 0.373333
NA SERP1739 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1778516 1191 - 0.310663
NA SERP0895 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS905539 600 + 0.268333
NA SERP0203 deoxynucleoside kinase family proteinSubName: Full=Deoxynucleoside kinase family protein; chromosome CDS213090 618 - 0.268608
NA SERP0202 deoxynucleoside kinase family proteinSubName: Full=Deoxynucleoside kinase family protein; chromosome CDS212435 663 - 0.334842
NA SERP0734 Ham1 family proteinRecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; chromosome CDS734395 588 + 0.336735
NA SERP0204 cytidine/deoxycytidylate deaminase family proteinRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS213774 507 + 0.382643
NA SERP0642 inosine-uridine preferring nucleoside hydrolase family proteinSubName: Full=Inosine-uridine preferring nucleoside hydrolase family protein; chromosome CDS636822 909 - 0.335534
NA SERP1373 HIT family proteinSubName: Full=HIT family protein; chromosome CDS1430230 426 + 0.300469
NA SERP1156 comE operon protein 2SubName: Full=ComE operon protein 2; chromosome CDS1195066 462 - 0.350649
NA SERP1865 inosine-uridine preferring nucleoside hydrolase family proteinSubName: Full=Inosine-uridine preferring nucleoside hydrolase family protein; chromosome CDS1890855 942 - 0.349257
NA SERP2217 cytosine/purines, uracil, thiamine, allantoin permease family proteinSubName: Full=Cytosine/purines, uracil, thiamine, allantoin permease family protein; chromosome CDS2253837 1167 - 0.323051
NA SERP2288 5'-nucleotidase family proteinSubName: Full=5-nucleotidase family protein; chromosome CDS2329253 1536 + 0.33138
NA SERP1511 truncated ribonucleoside-diphosphate reductase 2 alpha subunit chromosome CDS1574054 264 - 0.344697
NA SERP1614 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1637021 285 - 0.382456
NA SERP2077 Na+/H+ antiporter, putativeSubName: Full=Na+/H+ antiporter, putative; chromosome CDS2103160 1788 - 0.337808
NA SERP0304 nucleoside permease NupC, putativeSubName: Full=Nucleoside permease NupC, putative; chromosome CDS306171 1230 + 0.342276
NA SERP1513 truncated ribonucleoside-diphosphate reductase 2, alpha subunit chromosome CDS1575579 2910 - 0.310309
NA SERP0510 5'-nucleotidase family proteinSubName: Full=5-nucleotidase family protein; chromosome CDS497037 1320 + 0.338636
NA SERP0613 5' nucleotidase family proteinSubName: Full=5 nucleotidase family protein; chromosome CDS608008 1506 + 0.314741
NA SERP2046 exopolyphosphataseSubName: Full=Exopolyphosphatase; chromosome CDS2066632 1533 + 0.333333
adk SERP1810 adenylate kinaseRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS1851258 648 - 0.341049
apt SERP1198 adenine phosphoribosyltransferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome CDS1235559 519 - 0.319846
carA SERP0768 carbamoyl-phosphate synthase, small subunitRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS766435 1101 + 0.375114
carB SERP0769 carbamoyl-phosphate synthase, large subunitRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome CDS767528 3174 + 0.362319
cdd SERP1135 cytidine deaminaseSubName: Full=Cytidine deaminase; EC=3.5.4.5; chromosome CDS1174138 405 - 0.37037
cmk SERP1045 cytidylate kinaseRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; chromosome CDS1091179 648 - 0.342593
deoC SERP1745 deoxyribose-phosphate aldolaseRecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase; chromosome CDS1784623 663 - 0.357466
deoD SERP1747 purine nucleoside phosphorylaseRecName: Full=Purine nucleoside phosphorylase DeoD-type; Short=PNP; EC=2.4.2.1; chromosome CDS1785492 711 + 0.350211
fhs SERP1295 formate--tetrahydrofolate ligaseRecName: Full=Formate--tetrahydrofolate ligase; EC=6.3.4.3; AltName: Full=Formyltetrahydrofolate synthetase; Short=FHS; Short=FTHFS; chromosome CDS1341346 1668 - 0.361511
gmk SERP0776 guanylate kinaseRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome CDS775250 624 + 0.355769
guaA SERP0070 GMP synthaseRecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome CDS58718 1542 + 0.381323
guaC SERP0906 guanosine monophosphate reductaseRecName: Full=GMP reductase; EC=1.7.1.7; AltName: Full=Guanosine 5-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase; chromosome CDS916896 978 + 0.334356
hpt SERP0149 hypoxanthine phosphoribosyltransferaseRecName: Full=Hypoxanthine-guanine phosphoribosyltransferase; Short=HGPRT; Short=HGPRTase; EC=2.4.2.8; chromosome CDS139858 540 + 0.316667
mtn SERP1166 5'-methylthioadenosine/S-adenosylhomocysteinenuc leosidaseRecName: Full=5-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Short=MTA/SAH nucleosidase; Short=MTAN; EC=3.2.2.9; AltName: Full=5-methylthioadenosine nucleosidase; Short=MTA nucleosidase; AltName: Full=S-adenosylhomocysteine nucleosidase; Short=AdoHcy nucleosidase; Short=SAH nucleosidase; Short=SRH nucleosidase; chromosome CDS1201325 687 - 0.3246
nrdD SERP2183 anaerobic ribonucleoside-triphosphate reductaseSubName: Full=Anaerobic ribonucleoside-triphosphate reductase; EC=1.17.4.2; chromosome CDS2215661 1851 - 0.351702
nrdE SERP0397 ribonucleoside-diphosphate reductase 2, alpha subunitRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS398490 2106 + 0.320513
nrdF-1 SERP0398 ribonucleoside-diphosphate reductase 2, beta subunitSubName: Full=Ribonucleoside-diphosphate reductase 2, beta subunit; EC=1.17.4.1; chromosome CDS400714 969 + 0.313726
nrdF-2 SERP1510 ribonucleoside-diphosphate reductase 2, beta subunitSubName: Full=Ribonucleoside-diphosphate reductase 2, beta subunit; EC=1.17.4.1; chromosome CDS1572986 1023 - 0.327468
nrdI-1 SERP0396 nrdI proteinRecName: Full=Protein NrdI; chromosome CDS398129 399 + 0.330827
nrdI-2 SERP1515 nrdI proteinSubName: Full=NrdI protein; chromosome CDS1578956 414 - 0.335749
nupC SERP0161 nucleoside permease NupCSubName: Full=Nucleoside permease NupC; chromosome CDS165575 1215 - 0.328395
pbuX SERP0068 xanthine permeaseSubName: Full=Xanthine permease; chromosome CDS55779 1269 + 0.345154
pdp SERP1744 pyrimidine-nucleoside phosphorylaseRecName: Full=Pyrimidine-nucleoside phosphorylase; Short=PYNP; EC=2.4.2.2; chromosome CDS1783289 1302 - 0.375576
prsA SERP0138 ribose-phosphate pyrophosphokinaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; Short=P-Rib-PP synthase; Short=PRPP synthase; chromosome CDS128259 966 + 0.359213
purA SERP2536 adenylosuccinate synthetaseRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome CDS2592839 1284 - 0.389408
purB SERP1446 adenylosuccinate lyaseRecName: Full=Adenylosuccinate lyase; Short=ASL; EC=4.3.2.2; AltName: Full=Adenylosuccinase; Short=ASase; chromosome CDS1511231 1296 - 0.349537
purC SERP0651 phosphoribosylaminoimidazole-succinocarboxamidesynthaseRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome CDS645802 705 + 0.304965
purD SERP0659 phosphoribosylamine--glycine ligaseRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome CDS654195 1242 + 0.358293
purE SERP0649 phosphoribosylaminoimidazole carboxylase, catalytic subunitRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; chromosome CDS644205 483 + 0.380952
purF SERP0655 amidophosphoribosyltransferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; Short=GPATase; Flags: Precursor; chromosome CDS649600 1485 + 0.36229
purH SERP0658 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolaseRecName: Full=Bifunctional purine biosynthesis protein PurH; Includes: RecName: Full=Phosphoribosylaminoimidazolecarboxamide formyltransferase; EC=2.1.2.3; AltName: Full=AICAR transformylase; Includes: RecName: Full=IMP cyclohydrolase; EC=3.5.4.10; AltName: Full=ATIC; AltName: Full=IMP synthase; AltName: Full=Inosinicase; chromosome CDS652691 1479 + 0.344151
purK SERP0650 phosphoribosylaminoimidazole carboxylase, ATPase subunitRecName: Full=N5-carboxyaminoimidazole ribonucleotide synthase; Short=N5-CAIR synthase; EC=6.3.4.18; AltName: Full=5-(carboxyamino)imidazole ribonucleotide synthetase; chromosome CDS644674 1128 + 0.332447
purL SERP0654 phosphoribosylformylglycinamidine synthase IIRecName: Full=Phosphoribosylformylglycinamidine synthase 2; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase II; Short=FGAM synthase II; chromosome CDS647432 2190 + 0.358447
purM SERP0656 phosphoribosylformylglycinamidine cyclo-ligaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; chromosome CDS651077 1032 + 0.348837
purN SERP0657 phosphoribosylglycinamide formyltransferaseRecName: Full=Phosphoribosylglycinamide formyltransferase; EC=2.1.2.2; AltName: Full=5-phosphoribosylglycinamide transformylase; AltName: Full=GAR transformylase; Short=GART; chromosome CDS652108 567 + 0.33157
purQ SERP0653 phosphoribosylformylglycinamidine synthase IRecName: Full=Phosphoribosylformylglycinamidine synthase 1; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase I; Short=FGAM synthase I; chromosome CDS646768 672 + 0.35119
purR SERP0134 pur operon repressorSubName: Full=Pur operon repressor; chromosome CDS124556 825 + 0.339394
purS SERP0652 phosphoribosylformylglycinamidine synthase, PurS proteinSubName: Full=Phosphoribosylformylglycinamidine synthase, PurS protein; chromosome CDS646506 261 + 0.329502
pyrB SERP0766 aspartate carbamoyltransferaseRecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome CDS764258 882 + 0.329932
pyrC SERP0767 dihydroorotaseRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS765157 1278 + 0.346635
pyrD SERP2144 dihydroorotate dehydrogenaseSubName: Full=Dihydroorotate dehydrogenase; EC=1.3.98.1; chromosome CDS2171689 1065 + 0.331455
pyrE SERP0771 orotate phosphoribosyltransferaseRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome CDS771429 612 + 0.351307
pyrF SERP0770 orotidine 5'-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome CDS770736 693 + 0.347763
pyrG SERP1734 CTP synthaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome CDS1772905 1608 - 0.343905
pyrH SERP0825 uridylate kinaseRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome CDS829440 723 + 0.365145
pyrR SERP0764 pyrimidine operon regulatory proteinRecName: Full=Bifunctional protein PyrR; Includes: RecName: Full=Pyrimidine operon regulatory protein; Includes: RecName: Full=Uracil phosphoribosyltransferase; Short=UPRTase; EC=2.4.2.9; chromosome CDS762165 528 + 0.348485
tdk SERP1726 thymidine kinaseRecName: Full=Thymidine kinase; EC=2.7.1.21; chromosome CDS1763162 600 - 0.376667
thyA-1 SERP1003 thymidylate synthaseRecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome CDS1017520 957 - 0.321839
thyA-2 SERP1582 thymidylate synthaseRecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome CDS1611291 957 - 0.320794
tmk SERP0120 thymidylate kinaseRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome CDS113038 612 + 0.321895
udk SERP1175 uridine kinaseRecName: Full=Uridine kinase; EC=2.7.1.48; AltName: Full=Cytidine monophosphokinase; AltName: Full=Uridine monophosphokinase; chromosome CDS1209566 624 - 0.338141
upp SERP1718 uracil phosphoribosyltransferaseRecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; chromosome CDS1757086 630 - 0.374603
uraA SERP0765 uracil permeaseSubName: Full=Uracil permease; chromosome CDS762940 1293 + 0.343387
xpt SERP0067 xanthine phosphoribosyltransferaseRecName: Full=Xanthine phosphoribosyltransferase; Short=XPRTase; EC=2.4.2.22; chromosome CDS55201 579 + 0.34715