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2024-05-19 18:22:09

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Erwinia carotovora subsp. atroseptica SCRI1043, SCRI1043

Number of genes found: 86

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Erwinia carotovora subsp. atroseptica SCRI1043, SCRI1043
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA ECA4423 putative nucleoside hydrolaseSubName: Full=Putative nucleoside hydrolase; chromosome CDS4962494 972 - 0.547325
NA ECA0035 putative purine permeaseSubName: Full=Putative purine permease; chromosome CDS43358 1389 - 0.542837
NA ECA1481 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1677773 639 + 0.517997
NA ECA0473 putative Na+ dependent nucleoside transporter-family proteinSubName: Full=Putative Na+ dependent nucleoside transporter-family protein; chromosome CDS537938 1278 + 0.515649
NA ECA0129 putative deoxycytidylate deaminaseSubName: Full=Putative deoxycytidylate deaminase; chromosome CDS148811 1581 - 0.350411
NA ECA1809 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2055442 351 + 0.532764
NA ECA0053 putative phosphodiesteraseSubName: Full=Putative phosphodiesterase; chromosome CDS65657 1896 - 0.517405
NA ECA1874 putative inosine-uridine preferring nucleoside hydrolaseSubName: Full=Putative inosine-uridine preferring nucleoside hydrolase; chromosome CDS2130168 1014 + 0.514793
NA ECA0932 permeaseSubName: Full=Permease; chromosome CDS1043321 1317 - 0.498861
NA ECA2870 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3212038 417 + 0.371703
NA ECA4424 putative nucleoside hydrolase proteinSubName: Full=Putative nucleoside hydrolase protein; chromosome CDS4963467 954 - 0.552411
NA ECA3005 putative glutamine amidotransferaseSubName: Full=Putative glutamine amidotransferase; EC=6.3.-.-; chromosome CDS3358615 723 - 0.565699
NA ECA2641 permeaseSubName: Full=Permease; chromosome CDS2970344 1305 - 0.431418
NA ECA2020 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2294424 2577 + 0.415988
NA ECA1310 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1483576 483 + 0.501035
NA ECA4197 probable lyaseSubName: Full=Probable lyase; chromosome CDS4689472 1365 - 0.523077
NA ECA2766 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3107820 555 - 0.454054
NA ECA3260 putative cytidine and deoxycytidylate deaminaseRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS3651263 525 - 0.569524
NA ECA2684 putative deoxyribose-phosphate aldolaseRecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase; chromosome CDS3019705 669 + 0.530643
NA ECA3631 Ham1 protein homologRecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; chromosome CDS4079441 594 + 0.572391
NA ECA2974 MutT-like proteinSubName: Full=MutT-like protein; chromosome CDS3325375 450 + 0.484444
add ECA2266 adenosine deaminaseRecName: Full=Adenosine deaminase; EC=3.5.4.4; AltName: Full=Adenosine aminohydrolase; chromosome CDS2567649 1014 + 0.535503
adk ECA1180 adenylate kinaseRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS1335658 645 + 0.500775
amn ECA1547 AMP nucleosidaseSubName: Full=AMP nucleosidase; EC=3.2.2.4; chromosome CDS1801686 1461 - 0.574264
apt ECA1175 adenine phosphoribosyltransferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome CDS1329655 558 + 0.537634
carA ECA3871 carbamoyl-phosphate synthase small chainRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS4330699 1149 - 0.531767
carB ECA3870 carbamoyl-phosphate synthase large chainRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome CDS4327460 3225 - 0.538295
cdd ECA2830 cytidine deaminaseRecName: Full=Cytidine deaminase; EC=3.5.4.5; AltName: Full=Cytidine aminohydrolase; Short=CDA; chromosome CDS3170057 891 + 0.556678
cmk ECA2592 cytidylate kinaseRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; chromosome CDS2925815 678 - 0.533923
cpdB ECA3602 2',3'-cyclic-nucleotide 2'-phosphodiesteraseSubName: Full=2,3-cyclic-nucleotide 2-phosphodiesterase; EC=3.1.4.16; chromosome CDS4051288 1953 + 0.532514
cyaA ECA4187 adenylate cyclaseRecName: Full=Adenylate cyclase; EC=4.6.1.1; chromosome CDS4677604 2559 - 0.529504
cyaB ECA2795 adenylate cyclaseSubName: Full=Adenylate cyclase; EC=4.6.1.1; chromosome CDS3135382 543 - 0.390424
dcd ECA1412 deoxycytidine triphosphate deaminaseRecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase; EC=3.5.4.13; chromosome CDS1600255 582 + 0.541237
deoA ECA0728 thymidine phosphorylaseRecName: Full=Thymidine phosphorylase; EC=2.4.2.4; AltName: Full=TdRPase; chromosome CDS795852 1329 + 0.58465
deoC ECA0727 deoxyribose-phosphate aldolaseSubName: Full=Deoxyribose-phosphate aldolase; EC=4.1.2.4; chromosome CDS794943 780 + 0.553846
deoD ECA0730 purine nucleoside phosphorylaseRecName: Full=Purine nucleoside phosphorylase DeoD-type; Short=PNP; EC=2.4.2.1; chromosome CDS798538 720 + 0.522222
dgt ECA3302 deoxyguanosinetriphosphate triphosphohydrolaseSubName: Full=Deoxyguanosinetriphosphate triphosphohydrolase; EC=3.1.5.1; chromosome CDS3710149 1512 - 0.513228
dut ECA0143 deoxyuridine 5'-triphosphate nucleotidohydrolaseRecName: Full=Deoxyuridine 5-triphosphate nucleotidohydrolase; Short=dUTPase; EC=3.6.1.23; AltName: Full=dUTP pyrophosphatase; chromosome CDS165111 459 - 0.544662
gmk ECA0040 guanylate kinaseRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome CDS50333 624 - 0.501603
gppA ECA4214 guanosine-5'-triphosphate,3'-diphosphatepyrophos phataseRecName: Full=Guanosine-5-triphosphate,3-diphosphate pyrophosphatase; EC=3.6.1.40; AltName: Full=Guanosine pentaphosphate phosphohydrolase; AltName: Full=pppGpp-5-phosphohydrolase; chromosome CDS4710897 1497 + 0.551102
gpt ECA3466 xanthine-guanine phosphoribosyltransferaseRecName: Full=Xanthine phosphoribosyltransferase; EC=2.4.2.22; AltName: Full=Xanthine-guanine phosphoribosyltransferase; Short=XGPRT; chromosome CDS3885899 459 - 0.518519
guaA ECA3208 GMP synthase [glutamine-hydrolyzing]RecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome CDS3589055 1578 - 0.554499
guaC ECA3801 GMP reductaseRecName: Full=GMP reductase; EC=1.7.1.7; AltName: Full=Guanosine 5-monophosphate oxidoreductase; chromosome CDS4249388 1041 - 0.516811
hpt ECA3328 hypoxanthine phosphoribosyltransferaseSubName: Full=Hypoxanthine phosphoribosyltransferase; EC=2.4.2.8; chromosome CDS3737777 537 - 0.499069
mtn ECA3303 Mta/Sah nucleosidase (P46) [includes: 5'-methylthioadenosine nucleosidase and S-adenosylhomocysteine nucleosidase]RecName: Full=5-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Short=MTA/SAH nucleosidase; Short=MTAN; EC=3.2.2.9; AltName: Full=5-methylthioadenosine nucleosidase; Short=MTA nucleosidase; AltName: Full=S-adenosylhomocysteine nucleosidase; Short=AdoHcy nucleosidase; Short=SAH nucleosidase; Short=SRH nucleosidase; chromosome CDS3711890 699 + 0.547926
ndk ECA3224 nucleoside diphosphate kinaseRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome CDS3608005 429 - 0.515152
nrdA ECA1199 ribonucleoside-diphosphate reductase 1 alpha chainRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS1359896 2286 - 0.52056
nrdB ECA1198 ribonucleoside-diphosphate reductase 1 beta chainSubName: Full=Ribonucleoside-diphosphate reductase 1 beta chain; EC=1.17.4.1; chromosome CDS1358654 1131 - 0.519894
nrdD ECA0375 anaerobic ribonucleoside-triphosphate reductaseSubName: Full=Anaerobic ribonucleoside-triphosphate reductase; EC=1.17.4.2; chromosome CDS424789 2139 - 0.540907
nrdE ECA3337 ribonucleoside-diphosphate reductase 2 alpha chainRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS3745456 2148 + 0.514898
nrdF ECA3338 ribonucleoside-diphosphate reductase 2 beta chainRecName: Full=Ribonucleoside-diphosphate reductase subunit beta; EC=1.17.4.1; chromosome CDS3747628 963 + 0.510903
nrdI ECA3336 NrdI proteinRecName: Full=Protein NrdI; chromosome CDS3745052 408 + 0.539216
nupC1 ECA3183 nucleoside permeaseSubName: Full=Nucleoside permease; chromosome CDS3557692 1197 + 0.50543
nupC2 ECA3514 nucleoside permeaseSubName: Full=Nucleoside permease; chromosome CDS3935043 1185 + 0.491983
pcaB ECA2842 3-carboxy-cis,cis-muconate cycloisomeraseSubName: Full=3-carboxy-cis,cis-muconate cycloisomerase; EC=5.5.1.2; chromosome CDS3185328 1350 + 0.534815
ppx ECA3165 exopolyphosphataseSubName: Full=Exopolyphosphatase; EC=3.6.1.11; chromosome CDS3533985 1536 + 0.518229
prs ECA2186 ribose-phosphate pyrophosphokinaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; chromosome CDS2488785 948 - 0.513713
purA ECA3929 adenylosuccinate synthetaseRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome CDS4397095 1299 - 0.5204
purB ECA2444 adenylosuccinate lyaseSubName: Full=Adenylosuccinate lyase; EC=4.3.2.2; chromosome CDS2759027 1371 + 0.513494
purC ECA1264 phosphoribosylaminoimidazole-succinocarboxamidesynthaseRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome CDS1436929 714 + 0.508403
purD ECA0240 phosphoribosylamine--glycine ligaseRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome CDS278956 1287 - 0.533023
purE ECA3156 phosphoribosylaminoimidazole carboxylase catalytic subunitRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; chromosome CDS3521609 510 + 0.568627
purF ECA3052 amidophosphoribosyltransferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome CDS3408341 1518 - 0.511199
purH ECA0241 bifunctional purine biosynthesis protein PurH [includes: phosphoribosylaminoimidazolecarboxamide formyltransferase; IMP cyclohydrolase]RecName: Full=Bifunctional purine biosynthesis protein PurH; Includes: RecName: Full=Phosphoribosylaminoimidazolecarboxamide formyltransferase; EC=2.1.2.3; AltName: Full=AICAR transformylase; Includes: RecName: Full=IMP cyclohydrolase; EC=3.5.4.10; AltName: Full=ATIC; AltName: Full=IMP synthase; AltName: Full=Inosinicase; chromosome CDS280260 1590 - 0.525157
purK ECA3157 phosphoribosylaminoimidazole carboxylase ATPase subunitSubName: Full=Phosphoribosylaminoimidazole carboxylase ATPase subunit; EC=4.1.1.21; chromosome CDS3522115 1071 + 0.557423
purL ECA3258 phosphoribosylformylglycinamidine synthaseRecName: Full=Phosphoribosylformylglycinamidine synthase; Short=FGAM synthase; Short=FGAMS; EC=6.3.5.3; AltName: Full=Formylglycinamide ribotide amidotransferase; Short=FGARAT; AltName: Full=Formylglycinamide ribotide synthetase; chromosome CDS3645506 3885 - 0.558559
purM ECA1254 phosphoribosylformylglycinamidine cyclo-ligaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; chromosome CDS1426894 1038 - 0.540462
purN ECA1253 phosphoribosylglycinamide formyltransferaseSubName: Full=Phosphoribosylglycinamide formyltransferase; EC=2.1.2.2; chromosome CDS1426256 639 - 0.524257
purT ECA2477 phosphoribosylglycinamide formyltransferase 2RecName: Full=Phosphoribosylglycinamide formyltransferase 2; Short=GART 2; EC=2.1.2.-; AltName: Full=5-phosphoribosylglycinamide transformylase 2; AltName: Full=Formate-dependent GAR transformylase; AltName: Full=GAR transformylase 2; chromosome CDS2791280 1179 + 0.543681
purU ECA2333 formyltetrahydrofolate deformylaseSubName: Full=Formyltetrahydrofolate deformylase; EC=3.5.1.10; chromosome CDS2642732 849 + 0.500589
pyrB ECA0382 aspartate carbamoyltransferase catalytic subunitRecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome CDS432459 936 - 0.541667
pyrC ECA1787 dihydroorotaseRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS2033130 1044 - 0.509579
pyrD ECA2538 dihydroorotate dehydrogenaseRecName: Full=Dihydroorotate dehydrogenase (quinone); EC=1.3.5.2; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase; chromosome CDS2858643 1011 - 0.450049
pyrE ECA0141 orotate phosphoribosyltransferaseRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome CDS163345 642 + 0.542056
pyrF ECA1957 orotidine 5'-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome CDS2216576 744 + 0.555108
pyrG ECA3567 CTP synthaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome CDS4001842 1638 - 0.515873
pyrH ECA1033 uridylate kinaseRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome CDS1156279 726 + 0.522039
pyrI ECA0381 aspartate carbamoyltransferase regulatory subunitRecName: Full=Aspartate carbamoyltransferase regulatory chain; chromosome CDS431979 465 - 0.51828
tdk ECA2327 thymidine kinaseRecName: Full=Thymidine kinase; EC=2.7.1.21; chromosome CDS2637311 597 - 0.455611
thyA ECA0988 thymidylate synthaseRecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome CDS1100443 795 + 0.519497
tmk ECA1802 thymidylate kinaseRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome CDS2048443 660 + 0.540909
udk ECA1411 uridine kinaseRecName: Full=Uridine kinase; EC=2.7.1.48; AltName: Full=Cytidine monophosphokinase; AltName: Full=Uridine monophosphokinase; chromosome CDS1599518 642 + 0.481308
udp ECA0185 uridine phosphorylaseRecName: Full=Uridine phosphorylase; EC=2.4.2.3; chromosome CDS207819 771 + 0.544747
upp ECA1255 uracil phosphoribosyltransferaseRecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; chromosome CDS1428285 627 + 0.510367
uraA ECA1256 uracil permeaseSubName: Full=Uracil permease; chromosome CDS1429248 1290 + 0.552713
ushA ECA1184 protein UshA precursor [includes: UDP-sugar hydrolase and 5'-nucleotidase]SubName: Full=Protein UshA [includes: UDP-sugar hydrolase and 5-nucleotidase]; EC=3.1.3.5; EC=3.6.1.45; chromosome CDS1339959 1650 + 0.489091