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2024-05-18 20:48:41

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Yersinia pseudotuberculosis IP 32953, IP 32953

Number of genes found: 79

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Yersinia pseudotuberculosis IP 32953, IP 32953
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA YPTB3217 possible Xanthosine triphosphate pyrophosphataseRecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; chromosome CDS3781431 594 + 0.531987
NA YPTB1104 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1322686 483 + 0.490683
NA YPTB2881 putative zinc-binding proteinRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS3413275 564 - 0.537234
NA YPTB2793 NCS2 family uracil/xanthine transporterSubName: Full=NCS2 family uracil/xanthine transporter; chromosome CDS3295818 1287 - 0.504274
NA YPTB3607 putative deoxyribose-phosphate aldolaseSubName: Full=Putative deoxyribose-phosphate aldolase; EC=4.1.2.4; chromosome CDS4291163 702 + 0.481481
NA YPTB2963 putative Nucleobase:Cation symporter, NCS1 familySubName: Full=Putative Nucleobase:Cation symporter, NCS1 family; chromosome CDS3496321 1512 + 0.486772
NA YPTB1328 putative Mut family proteinSubName: Full=Putative Mut family protein; chromosome CDS1582373 456 - 0.493421
NA YPTB0580 putative Na+ dependent nucleoside transporter-family proteinSubName: Full=Putative Na+ dependent nucleoside transporter-family protein; Flags: Precursor; chromosome CDS682600 1272 + 0.513365
NA YPTB1968 putative chlorohydrolaseSubName: Full=Putative chlorohydrolase; chromosome CDS2318657 1371 + 0.495988
NA YPTB0031 NCS2 family xanthine/uracil:H+ symporterSubName: Full=NCS2 family xanthine/uracil:H+ symporter; chromosome CDS41738 1386 - 0.507215
NA YPTB0350 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS415400 1137 - 0.531223
NA pYV0089 yscM, lcrQ; putative type III secretion regulatoryRecName: Full=Yop proteins translocation protein M; AltName: Full=Low calcium response locus protein Q; pYV CDS61944 348 + 0.479885
NA YPTB0164 guanosine pentaphosphataseRecName: Full=Guanosine-5-triphosphate,3-diphosphate pyrophosphatase; EC=3.6.1.40; AltName: Full=Guanosine pentaphosphate phosphohydrolase; AltName: Full=pppGpp-5-phosphohydrolase; chromosome CDS195753 1497 - 0.507014
NA YPTB3154 hypothetical protein similar to protein 28-phage HP1SubName: Full=Uncharacterized protein; chromosome CDS3710090 330 + 0.472727
NA YPTB1799 putative modification methylaseSubName: Full=Putative modification methylase; chromosome CDS2146493 1746 + 0.521191
NA YPTB2453 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2899139 354 - 0.49435
add YPTB2180 adenosine deaminaseRecName: Full=Adenosine deaminase; EC=3.5.4.4; AltName: Full=Adenosine aminohydrolase; chromosome CDS2565873 1005 - 0.504478
adk YPTB0996 adenylate kinaseRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS1196569 645 + 0.458915
amn YPTB2211 putative AMP nucleosidaseSubName: Full=Putative AMP nucleosidase; EC=3.2.2.4; chromosome CDS2604403 1491 - 0.497653
apt YPTB0991 adenine phosphoribosyltransferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome CDS1190088 564 + 0.485816
carA YPTB0623 carbamoyl-phosphate synthetase, glutamine amidotransferase small subunitRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS739303 1176 + 0.505952
carB YPTB0624 carbamoyl-phosphate synthase, large subunitRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; Flags: Precursor; chromosome CDS740494 3234 + 0.516388
cdd YPTB1527 cytidine deaminaseRecName: Full=Cytidine deaminase; EC=3.5.4.5; AltName: Full=Cytidine aminohydrolase; Short=CDA; chromosome CDS1836612 885 - 0.500565
cmkA YPTB1416 cytidylate kinaseRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; chromosome CDS1694976 693 + 0.507937
codA YPTB3739 cytosine deaminaseSubName: Full=Cytosine deaminase; EC=3.5.4.1; chromosome CDS4437351 1299 - 0.517321
cpdB YPTB0446 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursorSubName: Full=2,3-cyclic-nucleotide 2-phosphodiesterase; EC=3.1.4.16; Flags: Precursor; chromosome CDS528162 1971 - 0.486555
cyaA YPTB0185 adenylate cyclaseRecName: Full=Adenylate cyclase; EC=4.6.1.1; chromosome CDS222786 2553 + 0.493145
cyaB YPTB1219 adenylate cyclase 2SubName: Full=Adenylate cyclase 2; EC=4.6.1.1; chromosome CDS1454790 540 + 0.435185
dcd YPTB1537 deoxycytidine triphosphate deaminaseRecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase; EC=3.5.4.13; chromosome CDS1848930 582 + 0.5189
deoA YPTB0582 thymidine phosphorylaseRecName: Full=Thymidine phosphorylase; EC=2.4.2.4; AltName: Full=TdRPase; chromosome CDS685418 1323 + 0.544218
deoC YPTB1354 putative deoxyribose-phosphate aldolaseRecName: Full=Deoxyribose-phosphate aldolase 1; Short=DERA 1; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase 1; AltName: Full=Phosphodeoxyriboaldolase 1; Short=Deoxyriboaldolase 1; chromosome CDS1615527 672 - 0.480655
deoC YPTB0581 2-deoxyribose-5-phosphate aldolase, NAD(P)-linkedRecName: Full=Deoxyribose-phosphate aldolase 2; Short=DERA 2; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase 2; AltName: Full=Phosphodeoxyriboaldolase 2; Short=Deoxyriboaldolase 2; chromosome CDS684500 798 + 0.507519
deoD YPTB0584 purine-nucleoside phosphorylaseRecName: Full=Purine nucleoside phosphorylase DeoD-type; Short=PNP; EC=2.4.2.1; chromosome CDS688220 720 + 0.498611
dgt YPTB0748 deoxyguanosine triphosphate triphosphohydrolaseRecName: Full=Deoxyguanosinetriphosphate triphosphohydrolase; Short=dGTP triphosphohydrolase; Short=dGTPase; EC=3.1.5.1; chromosome CDS898611 1521 + 0.431953
dut YPTB0044 deoxyuridine 5'-triphosphate nucleotidohydrolaseRecName: Full=Deoxyuridine 5-triphosphate nucleotidohydrolase; Short=dUTPase; EC=3.6.1.23; AltName: Full=dUTP pyrophosphatase; chromosome CDS57437 456 - 0.489035
gmk YPTB0037 guanylate kinaseRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome CDS50179 624 - 0.464744
gpt YPTB0901 guanine-hypoxanthine phosphoribosyltransferaseRecName: Full=Xanthine phosphoribosyltransferase; EC=2.4.2.22; AltName: Full=Xanthine-guanine phosphoribosyltransferase; Short=XGPRT; chromosome CDS1088824 459 + 0.48366
guaA YPTB2832 putative GMP synthaseRecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome CDS3345011 1578 - 0.493029
guaC YPTB0703 GMP reductaseRecName: Full=GMP reductase; EC=1.7.1.7; AltName: Full=Guanosine 5-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase; chromosome CDS841020 1044 + 0.472222
hpt YPTB0723 hypoxanthine phosphoribosyltransferaseSubName: Full=Hypoxanthine phosphoribosyltransferase; EC=2.4.2.8; chromosome CDS869211 537 + 0.472998
mtn YPTB0747 5'-methylthioadenosine/S-adenosylhomocysteinenuc leosidaseRecName: Full=5-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Short=MTA/SAH nucleosidase; Short=MTAN; EC=3.2.2.9; AltName: Full=5-methylthioadenosine nucleosidase; Short=MTA nucleosidase; AltName: Full=S-adenosylhomocysteine nucleosidase; Short=AdoHcy nucleosidase; Short=SAH nucleosidase; Short=SRH nucleosidase; chromosome CDS897599 702 - 0.511396
ndk YPTB2845 nucleoside diphosphate kinaseRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome CDS3361158 429 - 0.475524
nrdA YPTB1254 ribonucleoside-diphosphate reductase 1 alpha chainRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS1493904 2289 - 0.486239
nrdB YPTB1253 ribonucleoside-diphosphate reductase 1 beta chainSubName: Full=Ribonucleoside-diphosphate reductase 1 beta chain; EC=1.17.4.1; chromosome CDS1492612 1131 - 0.45977
nrdD YPTB0519 anaerobic ribonucleoside-triphosphate reductaseSubName: Full=Anaerobic ribonucleoside-triphosphate reductase; EC=1.17.4.2; chromosome CDS607691 2139 - 0.494156
nrdE YPTB2957 ribonucleoside-diphosphate reductase 2 alpha chainRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS3487533 2151 + 0.464435
nrdF YPTB2958 ribonucleoside-diphosphate reductase 2 beta chainRecName: Full=Ribonucleoside-diphosphate reductase subunit beta; EC=1.17.4.1; chromosome CDS3489790 972 + 0.426955
nrdI YPTB2956 NrdI protein homologueRecName: Full=Protein NrdI; chromosome CDS3487147 405 + 0.51358
nupC YPTB2706 CNT family H+/nucleoside symporterSubName: Full=CNT family H+/nucleoside symporter; chromosome CDS3196497 1185 + 0.44557
ppx YPTB2803 putative exopolyphosphataseSubName: Full=Putative exopolyphosphatase; EC=3.6.1.11; chromosome CDS3309507 1560 + 0.510256
prsA YPTB2001 ribose-phosphate pyrophosphokinaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; chromosome CDS2356697 948 - 0.501055
purA YPTB0430 adenylosuccinate synthetaseRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome CDS513918 1299 + 0.509623
purB YPTB2432 adenylosuccinate lyaseSubName: Full=Adenylosuccinate lyase; EC=4.3.2.2; chromosome CDS2874797 1371 + 0.475565
purC YPTB2781 phosphoribosylaminoimidazole-succinocarboxamidesynthaseRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome CDS3285387 714 - 0.453782
purD YPTB0299 phosphoribosylamine--glycine ligaseRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome CDS357064 1287 - 0.516706
purE YPTB1032 phosphoribosylaminoimidazole carboxylase catalytic subunit PurERecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; chromosome CDS1239985 525 - 0.56
purF YPTB2612 amidophosphoribosyltransferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome CDS3087113 1518 - 0.472332
purH YPTB0300 phosphoribosylaminoimidazolecarboxamideformyltransferaseRecName: Full=Bifunctional purine biosynthesis protein PurH; Includes: RecName: Full=Phosphoribosylaminoimidazolecarboxamide formyltransferase; EC=2.1.2.3; AltName: Full=AICAR transformylase; Includes: RecName: Full=IMP cyclohydrolase; EC=3.5.4.10; AltName: Full=ATIC; AltName: Full=IMP synthase; AltName: Full=Inosinicase; chromosome CDS358410 1590 - 0.513208
purI YPTB2795 putative phosphoribosylaminoimidazole synthetaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; chromosome CDS3298322 1044 + 0.517241
purK YPTB1031 phosphoribosylaminoimidazole carboxylase ATPase subunit PurKSubName: Full=Phosphoribosylaminoimidazole carboxylase ATPase subunit PurK; EC=4.1.1.21; chromosome CDS1238924 1065 - 0.523944
purL YPTB2879 phosphoribosylformylglycinamidine synthaseRecName: Full=Phosphoribosylformylglycinamidine synthase; Short=FGAM synthase; Short=FGAMS; EC=6.3.5.3; AltName: Full=Formylglycinamide ribotide amidotransferase; Short=FGARAT; AltName: Full=Formylglycinamide ribotide synthetase; chromosome CDS3407482 3891 - 0.534567
purN YPTB2796 putative phosphoribosylglycinamide formyltransferaseSubName: Full=Putative phosphoribosylglycinamide formyltransferase; EC=2.1.2.2; chromosome CDS3299480 639 + 0.507042
purT YPTB1651 phosphoribosylglycinamide formyltransferaseRecName: Full=Phosphoribosylglycinamide formyltransferase 2; Short=GART 2; EC=2.1.2.-; AltName: Full=5-phosphoribosylglycinamide transformylase 2; AltName: Full=Formate-dependent GAR transformylase; AltName: Full=GAR transformylase 2; chromosome CDS2003174 1182 - 0.532149
purU YPTB2097 formyltetrahydrofolate deformylaseSubName: Full=Formyltetrahydrofolate deformylase; EC=3.5.1.10; chromosome CDS2469767 849 - 0.42874
pyrB YPTB3531 aspartate carbamoyltransferase catalytic subunitRecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome CDS4197585 936 + 0.483974
pyrC YPTB2482 dihydroorotaseRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS2927509 1047 + 0.491882
pyrD YPTB1439 dihydroorotate dehydrogenaseRecName: Full=Dihydroorotate dehydrogenase (quinone); EC=1.3.5.2; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase; chromosome CDS1730592 1011 + 0.434224
pyrE YPTB0042 orotate phosphoribosyltransferaseRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome CDS55937 648 + 0.50463
pyrF YPTB2149 orotidine 5'-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome CDS2528035 738 + 0.520325
pyrG YPTB0754 CTP synthetaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome CDS908714 1638 + 0.485958
pyrH YPTB3001 uridylate kinaseRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome CDS3540132 726 - 0.495868
pyrI YPTB3532 aspartate carbamoyltransferase regulatory chainRecName: Full=Aspartate carbamoyltransferase regulatory chain; chromosome CDS4198529 468 + 0.482906
tdk YPTB2102 thymidine kinaseRecName: Full=Thymidine kinase; EC=2.7.1.21; chromosome CDS2476758 591 + 0.458545
thyA YPTB3033 thymidylate synthaseRecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome CDS3580235 795 - 0.466667
tmk YPTB2466 thymidylate kinaseRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome CDS2911358 639 - 0.538341
udk YPTB1536 uridine kinaseRecName: Full=Uridine kinase; EC=2.7.1.48; AltName: Full=Cytidine monophosphokinase; AltName: Full=Uridine monophosphokinase; chromosome CDS1848184 642 + 0.44081
udp YPTB0250 uridine phosphorylaseRecName: Full=Uridine phosphorylase; EC=2.4.2.3; chromosome CDS295424 762 + 0.507874
upp YPTB2794 uracil phosphoribosyltransferaseRecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; chromosome CDS3297261 627 - 0.478469
xapA YPTB1201 xanthosine phosphorylaseRecName: Full=Purine nucleoside phosphorylase; EC=2.4.2.1; AltName: Full=Inosine-guanosine phosphorylase; chromosome CDS1431492 864 + 0.450231