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2024-05-22 02:59:30

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Bdellovibrio bacteriovorus, HD100 = DSM 50701 = ATCC 15356 = ICPB 3268 NCIB 9529

Number of genes found: 73

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Bdellovibrio bacteriovorus, HD100 = DSM 50701 = ATCC 15356 = ICPB 3268 NCIB 9529
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Bd2701 putative HAM1 proteinRecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; chromosome CDS2622641 600 + 0.506667
NA Bd3420 Thymidine kinaseRecName: Full=Thymidine kinase; EC=2.7.1.21; chromosome CDS3332346 615 - 0.541463
NA Bd3843 hypothetical protein predicted by Glimmer/CriticaSubName: Full=Putative uncharacterized protein; Flags: Precursor; chromosome CDS3708851 675 - 0.583704
NA Bd3218 hypothetical protein predicted by Glimmer/CriticaSubName: Full=Putative uncharacterized protein; chromosome CDS3140287 789 + 0.524715
NA Bd2921 putative glutamine amidotransferaseSubName: Full=Putative glutamine amidotransferase; chromosome CDS2830810 675 + 0.525926
NA Bd2239 hypothetical protein predicted by Glimmer/CriticaSubName: Full=Putative uncharacterized protein; Flags: Precursor; chromosome CDS2137770 423 + 0.553191
NA Bd3007 phosphoribosylaminoimidazolesuccinocarboxamidesynthaseSubName: Full=Phosphoribosylaminoimidazolesuccinocarboxamide synthase; chromosome CDS2905359 1035 - 0.504348
NA Bd0403 hypothetical protein predicted by Glimmer/CriticaSubName: Full=Putative uncharacterized protein; chromosome CDS380108 549 + 0.486339
NA Bd3340 hypothetical protein predicted by Glimmer/CriticaSubName: Full=Putative uncharacterized protein; Flags: Precursor; chromosome CDS3252304 495 + 0.490909
NA Bd0236 Cytosine deaminaseRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS222472 942 - 0.541401
NA Bd0846 putative MTA/SAH nucleosidaseSubName: Full=Putative MTA/SAH nucleosidase; EC=3.2.2.9; chromosome CDS793550 564 + 0.503546
NA Bd3614 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS3510300 828 - 0.545894
NA Bd0334 hypothetical protein predicted by Glimmer/CriticaSubName: Full=Putative uncharacterized protein; chromosome CDS318292 1644 - 0.491484
NA Bd0173 hypothetical protein predicted by Glimmer/CriticaSubName: Full=Putative uncharacterized protein; Flags: Precursor; chromosome CDS160205 2766 - 0.505423
NA Bd2072 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein; Flags: Precursor; chromosome CDS1977689 1899 + 0.496051
NA Bd0085 cytidine/deoxycytidylate deaminase family proteinSubName: Full=Cytidine/deoxycytidylate deaminase family protein; EC=3.5.4.12; chromosome CDS80485 468 + 0.487179
NA Bd2538 hypothetical protein predicted by Glimmer/CriticaSubName: Full=Putative uncharacterized protein; Flags: Precursor; chromosome CDS2445082 1719 + 0.511344
NA Bd0061 SubName: Full=Putative Ppx/GppA phosphatase; EC=3.6.1.11; chromosome CDS55889 915 + 0.513661
NA Bd2593 SubName: Full=Putative uncharacterized protein; chromosome CDS2511748 1899 + 0.516061
NA Bd2079 hypothetical protein predicted by Glimmer/CriticaSubName: Full=Putative uncharacterized protein; Flags: Precursor; chromosome CDS1988722 999 - 0.481481
NA Bd0570 HIT family hydrolasesSubName: Full=HIT family hydrolases; chromosome CDS528703 402 + 0.477612
add Bd3476 SubName: Full=Add protein; EC=3.5.4.4; chromosome CDS3386824 1026 + 0.519493
adk Bd2954 adenylate kinaseRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS2863139 636 - 0.441824
amn Bd1233 AMP nucleosidaseSubName: Full=AMP nucleosidase; EC=3.2.2.4; chromosome CDS1170671 774 + 0.496124
aprT Bd0845 adenine phosphoribosyltransferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome CDS793048 498 + 0.522088
carA Bd0856 carbamoyl-phosphate synthase small chainRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS802162 1065 + 0.528638
carB Bd0858 carbamoyl-phosphate synthaseSubName: Full=Carbamoyl-phosphate synthase; EC=6.3.5.5; Flags: Precursor; chromosome CDS803907 3195 + 0.522066
cdd Bd2449 SubName: Full=Cdd protein; EC=3.5.4.5; chromosome CDS2358673 405 + 0.496296
cmk Bd1062 RecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; chromosome CDS1008028 654 + 0.521407
dcd Bd2411 (dCTP deaminase), deoxycytidine triphosphate deaminaseSubName: Full=(DCTP deaminase), deoxycytidine triphosphate deaminase; EC=3.5.4.13; Flags: Precursor; chromosome CDS2319303 537 + 0.454376
dra Bd3854 RecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase; chromosome CDS3718918 663 + 0.520362
dut Bd1553 deoxyuridine 5'-triphosphate nucleotidohydrolaseRecName: Full=Deoxyuridine 5-triphosphate nucleotidohydrolase; Short=dUTPase; EC=3.6.1.23; AltName: Full=dUTP pyrophosphatase; chromosome CDS1479991 450 + 0.546667
gmk Bd1568 RecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome CDS1493569 471 + 0.4862
guaA Bd2080 GMP synthaseRecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome CDS1989829 1521 - 0.500329
guaB Bd1779 Inosine-5-monophosphate dehydrogenaseSubName: Full=Inosine-5-monophosphate dehydrogenase; EC=1.1.1.205; chromosome CDS1710562 1041 - 0.539865
hit Bd1069 hit family hydrolaseSubName: Full=Hit family hydrolase; chromosome CDS1015384 495 + 0.486869
hprT Bd0122 SubName: Full=HprT protein; EC=2.4.2.8; chromosome CDS108603 519 - 0.489403
hpt Bd3219 hypoxanthine-guanine phosphoribosyltransferase homologueSubName: Full=Hypoxanthine-guanine phosphoribosyltransferase homologue; EC=2.4.2.8; chromosome CDS3141088 537 + 0.452514
ndk Bd3827 RecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome CDS3695038 426 + 0.467136
nrdA Bd1984 ribonucleoside-diphosphate reductase alpha chainRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS1894359 2406 - 0.492934
nrdB Bd1983 ribonucleotide-diphosphate reductase small chainRecName: Full=Ribonucleoside-diphosphate reductase subunit beta; EC=1.17.4.1; chromosome CDS1893220 1011 - 0.477745
nrdE Bd1196 ribonucleoside-diphosphate reductase alpha chainRecName: Full=Vitamin B12-dependent ribonucleotide reductase; EC=1.17.4.1; AltName: Full=Ribonucleoside-diphosphate reductase NrdJ; chromosome CDS1136102 2295 + 0.542919
pdp Bd3855 pyrimidine-nucleoside phosphorylaseSubName: Full=Pyrimidine-nucleoside phosphorylase; EC=2.4.2.2; chromosome CDS3719580 1320 + 0.505303
pfs Bd2653 5'-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidaseSubName: Full=5-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidase; EC=3.2.2.9; chromosome CDS2577518 723 + 0.517289
pnp Bd3856 RecName: Full=Purine nucleoside phosphorylase; EC=2.4.2.1; AltName: Full=Inosine-guanosine phosphorylase; chromosome CDS3720899 843 + 0.493476
ppx Bd1014 SubName: Full=Ppx protein; EC=3.6.1.11; chromosome CDS962483 957 - 0.535005
ppx Bd1525 SubName: Full=Ppx protein; EC=3.6.1.11; Flags: Precursor; chromosome CDS1447317 990 + 0.494949
prs Bd2704 ribose-phosphate pyrophosphokinaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; chromosome CDS2625365 948 + 0.547468
purA Bd1460 adenylosuccinate synthetaseRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome CDS1381102 1299 - 0.511932
purB Bd1949 SubName: Full=PurB protein; EC=4.3.2.2; chromosome CDS1861499 1257 + 0.498011
purD Bd3006 phosphoribosylamine--glycine ligaseSubName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; chromosome CDS2904124 1239 - 0.546408
purE Bd3008 phosphoribosylaminoimidazole carboxylase catalytic subunitSubName: Full=Phosphoribosylaminoimidazole carboxylase catalytic subunit; EC=4.1.1.21; chromosome CDS2906390 714 - 0.536415
purF Bd3009 amidophosphoribosyltransferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome CDS2907100 1440 - 0.521528
purH Bd3002 IMP cyclohydrolaseSubName: Full=IMP cyclohydrolase; EC=3.5.4.10; chromosome CDS2898234 1524 - 0.532808
purL Bd3004 phosphoribosylformylglycinamidine synthase IIRecName: Full=Phosphoribosylformylglycinamidine synthase 2; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase II; chromosome CDS2900484 3030 - 0.519142
purM Bd3001 phosphoribosylformylglycinamidine cyclo-ligaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; chromosome CDS2897221 1002 - 0.527944
purN Bd3005 phosphoribosylglycinamide formyltransferaseSubName: Full=Phosphoribosylglycinamide formyltransferase; EC=2.1.2.2; chromosome CDS2903516 612 - 0.521242
purQ Bd3003 phosphoribosylformylglycinamidine synthase ISubName: Full=Phosphoribosylformylglycinamidine synthase I; EC=6.3.5.3; chromosome CDS2899754 720 - 0.527778
pyrB Bd0855 aspartate carbamoyltransferaseSubName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; chromosome CDS801260 903 + 0.51052
pyrC Bd2688 dihydroorotaseSubName: Full=Dihydroorotase; EC=3.5.2.3; chromosome CDS2610790 1356 + 0.544248
pyrD Bd0715 SubName: Full=PyrD protein; EC=1.3.3.1; chromosome CDS673118 984 - 0.518293
pyrE Bd0979 RecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome CDS925817 540 - 0.531482
pyrF Bd2996 orotidine 5'-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; chromosome CDS2893087 720 - 0.529167
pyrG Bd0808 CTP synthaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome CDS757622 1665 + 0.510511
pyrH Bd3783 RecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome CDS3656731 714 + 0.512605
thyA Bd3230 RecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome CDS3148009 795 + 0.516981
tmk Bd1040 RecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome CDS984989 645 + 0.542636
udk Bd2645 uridine/cytidine kinaseRecName: Full=Uridine kinase; EC=2.7.1.48; chromosome CDS2568693 621 + 0.520129
udk Bd1530 RecName: Full=Uridine kinase; EC=2.7.1.48; chromosome CDS1452015 624 - 0.519231
upp Bd1531 SubName: Full=Upp protein; EC=2.4.2.9; chromosome CDS1452644 633 - 0.513428
xdhA Bd2633 xanthine dehydrogenaseSubName: Full=Xanthine dehydrogenase; EC=1.1.1.204; chromosome CDS2549194 1464 + 0.517076
xdhB Bd2634 xanthine dehydrogenase, C-terminal subunitSubName: Full=Xanthine dehydrogenase, C-terminal subunit; EC=1.1.1.204; chromosome CDS2550648 2328 + 0.531357
yicP Bd2636 probable adenine deaminase (synthesis xanthine)RecName: Full=Adenine deaminase; Short=Adenase; Short=Adenine aminase; EC=3.5.4.2; chromosome CDS2553756 1761 + 0.520727