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2024-05-01 08:52:20

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Bdellovibrio bacteriovorus, HD100 = DSM 50701 = ATCC 15356 = ICPB 3268 NCIB 9529

Number of genes found: 73

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Bdellovibrio bacteriovorus, HD100 = DSM 50701 = ATCC 15356 = ICPB 3268 NCIB 9529
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Bd0061 chromosome CDS55889 915 + 0.513661
NA Bd2593 chromosome CDS2511748 1899 + 0.516061
NA Bd0403 hypothetical protein predicted by Glimmer/Criticachromosome CDS380108 549 + 0.486339
NA Bd0173 hypothetical protein predicted by Glimmer/Criticachromosome CDS160205 2766 - 0.505423
NA Bd3007 phosphoribosylaminoimidazolesuccinocarboxamidesynthasechromosome CDS2905359 1035 - 0.504348
NA Bd2538 hypothetical protein predicted by Glimmer/Criticachromosome CDS2445082 1719 + 0.511344
NA Bd2072 conserved hypothetical proteinchromosome CDS1977689 1899 + 0.496051
NA Bd0334 hypothetical protein predicted by Glimmer/Criticachromosome CDS318292 1644 - 0.491484
NA Bd3614 conserved hypothetical proteinchromosome CDS3510300 828 - 0.545894
NA Bd2701 putative HAM1 proteinchromosome CDS2622641 600 + 0.506667
NA Bd3420 Thymidine kinasechromosome CDS3332346 615 - 0.541463
NA Bd0846 putative MTA/SAH nucleosidasechromosome CDS793550 564 + 0.503546
NA Bd3218 hypothetical protein predicted by Glimmer/Criticachromosome CDS3140287 789 + 0.524715
NA Bd0236 Cytosine deaminasechromosome CDS222472 942 - 0.541401
NA Bd0085 cytidine/deoxycytidylate deaminase family proteinchromosome CDS80485 468 + 0.487179
NA Bd0570 HIT family hydrolaseschromosome CDS528703 402 + 0.477612
NA Bd3340 hypothetical protein predicted by Glimmer/Criticachromosome CDS3252304 495 + 0.490909
NA Bd3843 hypothetical protein predicted by Glimmer/Criticachromosome CDS3708851 675 - 0.583704
NA Bd2239 hypothetical protein predicted by Glimmer/Criticachromosome CDS2137770 423 + 0.553191
NA Bd2921 putative glutamine amidotransferasechromosome CDS2830810 675 + 0.525926
NA Bd2079 hypothetical protein predicted by Glimmer/Criticachromosome CDS1988722 999 - 0.481481
add Bd3476 chromosome CDS3386824 1026 + 0.519493
adk Bd2954 adenylate kinasechromosome CDS2863139 636 - 0.441824
amn Bd1233 AMP nucleosidasechromosome CDS1170671 774 + 0.496124
aprT Bd0845 adenine phosphoribosyltransferasechromosome CDS793048 498 + 0.522088
carA Bd0856 carbamoyl-phosphate synthase small chainchromosome CDS802162 1065 + 0.528638
carB Bd0858 carbamoyl-phosphate synthasechromosome CDS803907 3195 + 0.522066
cdd Bd2449 chromosome CDS2358673 405 + 0.496296
cmk Bd1062 chromosome CDS1008028 654 + 0.521407
dcd Bd2411 (dCTP deaminase), deoxycytidine triphosphate deaminasechromosome CDS2319303 537 + 0.454376
dra Bd3854 chromosome CDS3718918 663 + 0.520362
dut Bd1553 deoxyuridine 5'-triphosphate nucleotidohydrolasechromosome CDS1479991 450 + 0.546667
gmk Bd1568 chromosome CDS1493569 471 + 0.4862
guaA Bd2080 GMP synthasechromosome CDS1989829 1521 - 0.500329
guaB Bd1779 Inosine-5-monophosphate dehydrogenasechromosome CDS1710562 1041 - 0.539865
hit Bd1069 hit family hydrolasechromosome CDS1015384 495 + 0.486869
hprT Bd0122 chromosome CDS108603 519 - 0.489403
hpt Bd3219 hypoxanthine-guanine phosphoribosyltransferase homologuechromosome CDS3141088 537 + 0.452514
ndk Bd3827 chromosome CDS3695038 426 + 0.467136
nrdA Bd1984 ribonucleoside-diphosphate reductase alpha chainchromosome CDS1894359 2406 - 0.492934
nrdB Bd1983 ribonucleotide-diphosphate reductase small chainchromosome CDS1893220 1011 - 0.477745
nrdE Bd1196 ribonucleoside-diphosphate reductase alpha chainchromosome CDS1136102 2295 + 0.542919
pdp Bd3855 pyrimidine-nucleoside phosphorylasechromosome CDS3719580 1320 + 0.505303
pfs Bd2653 5'-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidasechromosome CDS2577518 723 + 0.517289
pnp Bd3856 chromosome CDS3720899 843 + 0.493476
ppx Bd1525 chromosome CDS1447317 990 + 0.494949
ppx Bd1014 chromosome CDS962483 957 - 0.535005
prs Bd2704 ribose-phosphate pyrophosphokinasechromosome CDS2625365 948 + 0.547468
purA Bd1460 adenylosuccinate synthetasechromosome CDS1381102 1299 - 0.511932
purB Bd1949 chromosome CDS1861499 1257 + 0.498011
purD Bd3006 phosphoribosylamine--glycine ligasechromosome CDS2904124 1239 - 0.546408
purE Bd3008 phosphoribosylaminoimidazole carboxylase catalytic subunitchromosome CDS2906390 714 - 0.536415
purF Bd3009 amidophosphoribosyltransferasechromosome CDS2907100 1440 - 0.521528
purH Bd3002 IMP cyclohydrolasechromosome CDS2898234 1524 - 0.532808
purL Bd3004 phosphoribosylformylglycinamidine synthase IIchromosome CDS2900484 3030 - 0.519142
purM Bd3001 phosphoribosylformylglycinamidine cyclo-ligasechromosome CDS2897221 1002 - 0.527944
purN Bd3005 phosphoribosylglycinamide formyltransferasechromosome CDS2903516 612 - 0.521242
purQ Bd3003 phosphoribosylformylglycinamidine synthase Ichromosome CDS2899754 720 - 0.527778
pyrB Bd0855 aspartate carbamoyltransferasechromosome CDS801260 903 + 0.51052
pyrC Bd2688 dihydroorotasechromosome CDS2610790 1356 + 0.544248
pyrD Bd0715 chromosome CDS673118 984 - 0.518293
pyrE Bd0979 chromosome CDS925817 540 - 0.531482
pyrF Bd2996 orotidine 5'-phosphate decarboxylasechromosome CDS2893087 720 - 0.529167
pyrG Bd0808 CTP synthasechromosome CDS757622 1665 + 0.510511
pyrH Bd3783 chromosome CDS3656731 714 + 0.512605
thyA Bd3230 chromosome CDS3148009 795 + 0.516981
tmk Bd1040 chromosome CDS984989 645 + 0.542636
udk Bd2645 uridine/cytidine kinasechromosome CDS2568693 621 + 0.520129
udk Bd1530 chromosome CDS1452015 624 - 0.519231
upp Bd1531 chromosome CDS1452644 633 - 0.513428
xdhA Bd2633 xanthine dehydrogenasechromosome CDS2549194 1464 + 0.517076
xdhB Bd2634 xanthine dehydrogenase, C-terminal subunitchromosome CDS2550648 2328 + 0.531357
yicP Bd2636 probable adenine deaminase (synthesis xanthine)chromosome CDS2553756 1761 + 0.520727