Gene list
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COG category: Nucleotide transport and metabolism
Organism: Rhodopseudomonas palustris CGA009, CGA009
Number of genes found: 70
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Rhodopseudomonas palustris CGA009, CGA009 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | RPA2722 | possible MutT-like domain | SubName: Full=Possible MutT-like domain; | chromosome | CDS | 3092068 | 624 | - | 0.588141 |
NA | RPA3047 | putative exopolyphosphatase | SubName: Full=Putative exopolyphosphatase; | chromosome | CDS | 3448964 | 1506 | - | 0.671979 |
NA | RPA0614 | conserved unknown protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 681759 | 498 | - | 0.646586 |
NA | RPA1403 | possible Glutamine amidotransferase | SubName: Full=Possible Glutamine amidotransferase; | chromosome | CDS | 1550579 | 828 | + | 0.615942 |
NA | RPA4806 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 5425793 | 1257 | - | 0.684169 |
NA | RPA0554 | putative ureidoglycolate hydrolase | RecName: Full=Ureidoglycolate lyase; EC=4.3.2.3; AltName: Full=Ureidoglycolatase; | chromosome | CDS | 616457 | 513 | + | 0.678363 |
NA | RPA1101 | putative cytidine deaminase | SubName: Full=Putative cytidine deaminase; EC=3.5.4.5; | chromosome | CDS | 1205972 | 426 | + | 0.661972 |
NA | RPA2179 | xanthine-guanine phosphoribosyltransferase | RecName: Full=Xanthine phosphoribosyltransferase; EC=2.4.2.22; AltName: Full=Xanthine-guanine phosphoribosyltransferase; Short=XGPRT; | chromosome | CDS | 2453243 | 555 | + | 0.654054 |
NA | RPA0328 | Ham1-like protein | RecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; | chromosome | CDS | 356017 | 633 | - | 0.688784 |
NA | RPA4765 | unknown protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 5379553 | 1134 | - | 0.673721 |
NA | RPA1164 | possible cytidine and deoxycytidylate deaminase | RecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; | chromosome | CDS | 1272066 | 447 | - | 0.686801 |
NA | RPA2855 | dGTP triphosphohydrolase | RecName: Full=Deoxyguanosinetriphosphate triphosphohydrolase-like protein; | chromosome | CDS | 3230797 | 1215 | - | 0.672428 |
NA | RPA4561 | GMP reductase | SubName: Full=GMP reductase; EC=1.6.6.8; | chromosome | CDS | 5140697 | 1065 | - | 0.646009 |
NA | RPA1001 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1103391 | 591 | - | 0.681895 |
NA | RPA3140 | probable Hit-like protein involved in cell-cycle regulation | SubName: Full=Probable Hit-like protein involved in cell-cycle regulation; | chromosome | CDS | 3546263 | 471 | + | 0.63482 |
NA | RPA2168 | putative H+/nucleoside symporter | SubName: Full=Putative H+/nucleoside symporter; Flags: Precursor; | chromosome | CDS | 2442142 | 1251 | - | 0.665867 |
NA | RPA1073 | possible ADP-RIBOSE PHOSPHOHYDROLASE | SubName: Full=Possible ADP-RIBOSE PHOSPHOHYDROLASE; | chromosome | CDS | 1181726 | 435 | - | 0.696552 |
NA | RPA1441 | possible uridylate kinase | SubName: Full=Possible uridylate kinase; | chromosome | CDS | 1597783 | 822 | - | 0.682482 |
NA | RPA2908 | Cytidine/deoxycytidylate deaminase:Tat pathway signal | SubName: Full=Cytidine/deoxycytidylate deaminase:Tat pathway signal; Flags: Precursor; | chromosome | CDS | 3287610 | 645 | - | 0.620155 |
NA | RPA2098 | Glutamine amidotransferase class-I | SubName: Full=Glutamine amidotransferase class-I; | chromosome | CDS | 2356827 | 765 | + | 0.664052 |
NA | RPA4147 | putative nucleoside phosphorylase | RecName: Full=Putative thymidine phosphorylase; EC=2.4.2.4; AltName: Full=TdRPase; | chromosome | CDS | 4688895 | 1467 | + | 0.666667 |
NA | RPA0418 | Glutamine amidotransferase class-I | SubName: Full=Glutamine amidotransferase class-I; | chromosome | CDS | 460130 | 798 | - | 0.672932 |
NA | RPA2775 | thymidylate kinase | RecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; | chromosome | CDS | 3146572 | 693 | + | 0.681097 |
NA | RPA2261 | GMP synthetase: N-terminal fragment | SubName: Full=GMP synthetase: N-terminal; | chromosome | CDS | 2564583 | 240 | + | 0.591667 |
NA | RPA0951 | Nucleoside 2-deoxyribosyltransferase | SubName: Full=Nucleoside 2-deoxyribosyltransferase; | chromosome | CDS | 1051417 | 564 | - | 0.663121 |
NA | RPA3739 | unknown protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4227805 | 744 | - | 0.674731 |
NA | RPA2195 | possible exopolyphosphatase | SubName: Full=Possible exopolyphosphatase; EC=3.6.1.-; | chromosome | CDS | 2470320 | 1116 | + | 0.676523 |
NA | RPA1890 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2123340 | 3102 | - | 0.495809 |
NA | RPA1400 | possible Glutamine amidotransferase | SubName: Full=Possible Glutamine amidotransferase; | chromosome | CDS | 1546928 | 786 | + | 0.648855 |
NA | RPA1442 | possible uridine monophosphate kinase | SubName: Full=Possible uridine monophosphate kinase; EC=2.7.4.-; | chromosome | CDS | 1598614 | 813 | - | 0.644526 |
NA | RPA4821 | putative 5'-methylthioadenosine phosphorylase | RecName: Full=S-methyl-5-thioadenosine phosphorylase; EC=2.4.2.28; AltName: Full=5-methylthioadenosine phosphorylase; | chromosome | CDS | 5444305 | 876 | - | 0.65411 |
NA | RPA3056 | nucleoside-diphosphate-kinase | RecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; | chromosome | CDS | 3458619 | 423 | - | 0.628842 |
NA | RPA3820 | Protein of unknown function UPF0062 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4316040 | 246 | - | 0.650406 |
NA | RPA0955 | putative 5`-nucleotidase family protein | SubName: Full=Putative 5`-nucleotidase family protein; Flags: Precursor; | chromosome | CDS | 1055912 | 1719 | - | 0.65445 |
NA | RPA2865 | conserved unknown protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3242662 | 297 | - | 0.653199 |
adk | RPA3229 | Adenylate kinase | RecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; | chromosome | CDS | 3647585 | 1116 | - | 0.672043 |
apt | RPA4492 | adenine phosphoribosyltransferase | RecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; | chromosome | CDS | 5071736 | 546 | + | 0.67033 |
carA | RPA1276 | carbamoyl-phosphate synthase small subunit | RecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; | chromosome | CDS | 1396520 | 1194 | - | 0.651591 |
carB | RPA4071 | carbamoyl-phosphate synthase large subunit | RecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; | chromosome | CDS | 4608699 | 3330 | + | 0.651652 |
cmk | RPA0063 | cytidylate monophosphate kinase | RecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; | chromosome | CDS | 69377 | 639 | + | 0.671362 |
dut | RPA0080 | putative deoxyuridine 5'triphosphate nucleotidohydrolase | RecName: Full=Deoxyuridine 5-triphosphate nucleotidohydrolase; Short=dUTPase; EC=3.6.1.23; AltName: Full=dUTP pyrophosphatase; | chromosome | CDS | 92150 | 459 | - | 0.688453 |
garS | RPA1162 | Phosphoribosylglycinamide synthetase (GARS) | RecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; | chromosome | CDS | 1269727 | 1284 | + | 0.67757 |
guaA | RPA2203 | GMP synthetase | RecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; | chromosome | CDS | 2480182 | 1623 | + | 0.661738 |
kguA | RPA3069 | putative guanylate kinase | RecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; | chromosome | CDS | 3474243 | 663 | - | 0.648567 |
nrd | RPA2977 | ribonucleotide reductase | SubName: Full=Ribonucleotide reductase; | chromosome | CDS | 3372218 | 3774 | + | 0.655273 |
prsA | RPA4148 | putative ribose-phosphate pyrophosphokinase | SubName: Full=Putative ribose-phosphate pyrophosphokinase; EC=2.7.6.1; | chromosome | CDS | 4690358 | 912 | + | 0.669956 |
purA | RPA4295 | adenylosuccinate synthetase | RecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; | chromosome | CDS | 4841675 | 1293 | - | 0.665893 |
purB | RPA3817 | adenylosuccinate lyase | SubName: Full=Adenylosuccinate lyase; EC=4.3.2.2; | chromosome | CDS | 4313465 | 1308 | + | 0.66208 |
purC1 | RPA0558 | putative phosphoribosylaminoimidazole-succinocarboxamide synthase | RecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; | chromosome | CDS | 619666 | 918 | - | 0.671024 |
purC2 | RPA3821 | phosphoribosylaminoimidazole-succinocarboxamidesynthase | RecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; | chromosome | CDS | 4316467 | 768 | - | 0.61849 |
purE | RPA4174 | phosphoribosylaminoimidazole carboxylase catalytic subunit | RecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; | chromosome | CDS | 4719311 | 489 | + | 0.695297 |
purF | RPA3091 | amidophosphoribosyltransferase | RecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; | chromosome | CDS | 3496606 | 1530 | + | 0.667974 |
purH | RPA0028 | bifunctional purine biosynthesis protein | RecName: Full=Bifunctional purine biosynthesis protein PurH; | chromosome | CDS | 31989 | 1593 | - | 0.665411 |
purK | RPA4175 | phosphoribosylaminoimidazole carboxylase ATPase subunit | SubName: Full=Phosphoribosylaminoimidazole carboxylase ATPase subunit; EC=4.1.1.21; | chromosome | CDS | 4719796 | 1101 | + | 0.667575 |
purL | RPA3818 | phosphoribosylformylglycinamidine synthase I | RecName: Full=Phosphoribosylformylglycinamidine synthase 1; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase I; Short=FGAM synthase I; | chromosome | CDS | 4315019 | 702 | - | 0.665242 |
purM | RPA3051 | 5'-phosphoribosyl-5-aminoimidazole synthetase | RecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; | chromosome | CDS | 3454375 | 1074 | + | 0.673184 |
purN | RPA3052 | phosphoribosylglycinamide formyltransferase | SubName: Full=Phosphoribosylglycinamide formyltransferase; Flags: Precursor; | chromosome | CDS | 3455457 | 654 | + | 0.671254 |
purQ | RPA1597 | phosphoribosylformylglycinamide synthetase | RecName: Full=Phosphoribosylformylglycinamidine synthase 2; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase II; Short=FGAM synthase II; | chromosome | CDS | 1775573 | 2211 | + | 0.663953 |
purU | RPA4032 | formyltetrahydrofolate deformylase | SubName: Full=Formyltetrahydrofolate deformylase; EC=3.5.1.10; | chromosome | CDS | 4561152 | 864 | - | 0.628472 |
pyr | RPA3118 | putative noncatalytic chain of dihydroorotase | RecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; | chromosome | CDS | 3523126 | 1311 | + | 0.678108 |
pyrB | RPA3117 | aspartate carbamoyltransferase | RecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; | chromosome | CDS | 3522153 | 954 | + | 0.659329 |
pyrC | RPA1069 | possible dihydroorotase | SubName: Full=Possible dihydroorotase; | chromosome | CDS | 1178873 | 1335 | + | 0.657678 |
pyrE | RPA4724 | putative uridine 5-monophosphate synthase | RecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; | chromosome | CDS | 5333861 | 564 | + | 0.657801 |
pyrF | RPA0337 | orotidine 5`-phosphate decarboxylase | RecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; | chromosome | CDS | 365393 | 714 | + | 0.665266 |
pyrG | RPA2886 | CTP synthase | RecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; | chromosome | CDS | 3262627 | 1632 | - | 0.650735 |
pyrH | RPA2920 | uridylate kinase | RecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; | chromosome | CDS | 3300449 | 717 | - | 0.648536 |
ribP | RPA4362 | ribose-phosphate pyrophosphokinase | RecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; | chromosome | CDS | 4912172 | 954 | + | 0.650943 |
soxB | RPA4465 | sulfur/thiosulfate oxidation protein SoxB | SubName: Full=Sulfur/thiosulfate oxidation protein SoxB; Flags: Precursor; | chromosome | CDS | 5039800 | 1698 | - | 0.656066 |
thyA | RPA3493 | thymidylate synthase | RecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; | chromosome | CDS | 3942978 | 795 | - | 0.623899 |
uraI | RPA0797 | dihydroorotate dehydrogenase | RecName: Full=Dihydroorotate dehydrogenase (quinone); EC=1.3.5.2; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase; | chromosome | CDS | 883955 | 1095 | + | 0.687671 |