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2024-05-19 22:02:18

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Vibrio cholerae O1 biovar eltor str. N16961, N16961

Number of genes found: 77

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Vibrio cholerae O1 biovar eltor str. N16961, N16961
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
VC0051 phosphoribosylaminoimidazole carboxylase, ATPase subunitRecName: Full=N5-carboxyaminoimidazole ribonucleotide synthase; Short=N5-CAIR synthase; EC=6.3.4.18; AltName: Full=5-(carboxyamino)imidazole ribonucleotide synthetase; chromosome I CDS48324 1134 - 0.512346
VC0052 phosphoribosylaminoimidazole carboxylase, catalytic subunitRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; AltName: Full=5-(carboxyamino)imidazole ribonucleotide mutase; chromosome I CDS49461 486 - 0.526749
VC0122 adenylate cyclaseSubName: Full=Adenylate cyclase; chromosome I CDS116053 2532 + 0.488152
VC0175 deoxycytidylate deaminase-related proteinSubName: Full=Deoxycytidylate deaminase-related protein; chromosome I CDS175343 1599 - 0.368981
VC0211 orotate phosphoribosyltransferaseRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome I CDS218667 645 + 0.48062
VC0275 phosphoribosylamine--glycine ligaseRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome I CDS279539 1290 - 0.551938
VC0276 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolaseRecName: Full=Bifunctional purine biosynthesis protein PurH; Includes: RecName: Full=Phosphoribosylaminoimidazolecarboxamide formyltransferase; EC=2.1.2.3; AltName: Full=AICAR transformylase; Includes: RecName: Full=IMP cyclohydrolase; EC=3.5.4.10; AltName: Full=ATIC; AltName: Full=IMP synthase; AltName: Full=Inosinicase; chromosome I CDS280887 1593 - 0.531701
VC0304 guanosine-5'-triphosphate,3'-diphosphatepyrophos phataseRecName: Full=Guanosine-5-triphosphate,3-diphosphate pyrophosphatase; EC=3.6.1.40; AltName: Full=Guanosine pentaphosphate phosphohydrolase; AltName: Full=pppGpp-5-phosphohydrolase; chromosome I CDS314843 1494 - 0.502008
VC0383 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS396521 270 + 0.462963
VC0456 HAM1 proteinRecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; chromosome I CDS487639 603 - 0.527363
VC0585 hypoxanthine phosphoribosyltransferaseSubName: Full=Hypoxanthine phosphoribosyltransferase; chromosome I CDS613472 534 + 0.440075
VC0675 thymidylate synthaseRecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome I CDS721568 852 + 0.461268
VC0722 exopolyphosphataseRecName: Full=Exopolyphosphatase; Short=ExopolyPase; EC=3.6.1.11; AltName: Full=Metaphosphatase; chromosome I CDS775321 1572 - 0.473919
VC0756 nucleoside diphosphate kinaseRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome I CDS807964 429 + 0.482517
VC0768 GMP synthaseRecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome I CDS821588 1554 + 0.487773
VC0864 yfhC proteinRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome I CDS929010 582 + 0.487972
VC0869 phosphoribosylformylglycinamidine synthaseRecName: Full=Phosphoribosylformylglycinamidine synthase; Short=FGAM synthase; Short=FGAMS; EC=6.3.5.3; AltName: Full=Formylglycinamide ribotide amidotransferase; Short=FGARAT; AltName: Full=Formylglycinamide ribotide synthetase; chromosome I CDS931849 3894 + 0.526194
VC0957 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS1021527 471 + 0.462845
VC0986 adenylate kinaseRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome I CDS1050494 645 + 0.469767
VC1004 amidophosphoribosyltransferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome I CDS1074353 1515 + 0.486469
VC1034 uridine phosphorylaseRecName: Full=Uridine phosphorylase; EC=2.4.2.3; chromosome I CDS1100393 777 + 0.525097
VC1038 uridine kinaseRecName: Full=Uridine kinase; EC=2.7.1.48; AltName: Full=Cytidine monophosphokinase; AltName: Full=Uridine monophosphokinase; chromosome I CDS1105805 660 + 0.489394
VC1053 adenine phosphoribosyltransferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome I CDS1122126 546 + 0.489011
VC1126 adenylosuccinate lyaseSubName: Full=Adenylosuccinate lyase; chromosome I CDS1193367 1371 - 0.495259
VC1167 thymidine kinaseRecName: Full=Thymidine kinase; EC=2.7.1.21; chromosome I CDS1239996 579 + 0.488774
VC1190 phosphoribosylaminoimidazole-succinocarboxamide synthase, putativeRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome I CDS1264436 1218 - 0.468801
VC1228 phosphoribosylglycinamide formyltransferase 2RecName: Full=Phosphoribosylglycinamide formyltransferase 2; Short=GART 2; EC=2.1.2.-; AltName: Full=5-phosphoribosylglycinamide transformylase 2; AltName: Full=Formate-dependent GAR transformylase; AltName: Full=GAR transformylase 2; chromosome I CDS1302698 1182 - 0.51692
VC1231 cytidine deaminaseRecName: Full=Cytidine deaminase; EC=3.5.4.5; AltName: Full=Cytidine aminohydrolase; Short=CDA; chromosome I CDS1305061 888 - 0.505631
VC1255 ribonucleoside-diphosphate reductase, beta subunitSubName: Full=Ribonucleoside-diphosphate reductase, beta subunit; chromosome I CDS1325155 1170 - 0.462393
VC1256 ribonucleoside-diphosphate reductase, alpha subunitRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome I CDS1326384 2286 - 0.487752
VC1491 dihydroorotate dehydrogenaseRecName: Full=Dihydroorotate dehydrogenase (quinone); EC=1.3.5.2; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase; chromosome I CDS1596497 1011 - 0.454006
VC1897 Hit family proteinSubName: Full=Hit family protein; chromosome I CDS2043911 351 - 0.478632
VC1910 tRNA-(MS[2]IO[6]A)-hydroxylaseSubName: Full=tRNA-(MS[2]IO[6]A)-hydroxylase; chromosome I CDS2060044 777 + 0.431145
VC1911 orotidine 5`-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome I CDS2060878 696 - 0.484195
VC1916 cytidylate kinaseRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; chromosome I CDS2065592 690 - 0.491304
VC1953 NupC family proteinSubName: Full=NupC family protein; chromosome I CDS2106983 1218 - 0.489327
VC1979 deoxyguanosinetriphosphate triphosphohydrolaseRecName: Full=Deoxyguanosinetriphosphate triphosphohydrolase-like protein 1; chromosome I CDS2131258 1326 + 0.524133
VC1992 formyltetrahydrofolate deformylaseSubName: Full=Formyltetrahydrofolate deformylase; chromosome I CDS2143931 834 + 0.46283
VC2016 thymidylate kinaseRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome I CDS2170246 639 - 0.483568
VC2075 histidine triad family proteinSubName: Full=Histidine triad family protein; chromosome I CDS2232809 444 + 0.493243
VC2171 uracil permeaseSubName: Full=Uracil permease; chromosome I CDS2316680 1254 + 0.523923
VC2174 UDP-sugar hydrolaseRecName: Full=5-nucleotidase; EC=3.1.3.5; Flags: Precursor; chromosome I CDS2318621 1662 - 0.481949
VC2183 ribose-phosphate pyrophosphokinaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; Short=P-Rib-PP synthase; Short=PRPP synthase; chromosome I CDS2327823 945 + 0.498413
VC2225 uracil phosphoribosyltransferaseRecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; chromosome I CDS2379749 627 - 0.464115
VC2226 phosphoribosylformylglycinamidine cyclo-ligaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; chromosome I CDS2380542 1041 + 0.501441
VC2227 phosphoribosylglycinamide formyltransferaseSubName: Full=Phosphoribosylglycinamide formyltransferase; chromosome I CDS2381585 639 + 0.485133
VC2258 uridylate kinaseRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome I CDS2413498 732 - 0.490437
VC2277 xanthine-guanine phosphoribosyltransferaseRecName: Full=Xanthine phosphoribosyltransferase; EC=2.4.2.22; AltName: Full=Xanthine-guanine phosphoribosyltransferase; Short=XGPRT; chromosome I CDS2431382 465 - 0.477419
VC2344 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS2499261 2340 + 0.473077
VC2347 purine nucleoside phosphorylaseRecName: Full=Purine nucleoside phosphorylase DeoD-type 1; Short=PNP 1; EC=2.4.2.1; chromosome I CDS2503591 726 - 0.487603
VC2349 thymidine phosphorylaseRecName: Full=Thymidine phosphorylase; EC=2.4.2.4; AltName: Full=TdRPase; chromosome I CDS2505637 1428 - 0.52521
VC2350 deoxyribose-phosphate aldolaseRecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase; chromosome I CDS2507071 780 - 0.484615
VC2352 NupC family proteinSubName: Full=NupC family protein; chromosome I CDS2508452 1257 - 0.487669
VC2379 MTA/SAH nucleosidaseRecName: Full=5-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Short=MTA/SAH nucleosidase; Short=MTAN; EC=3.2.2.9; AltName: Full=5-methylthioadenosine nucleosidase; Short=MTA nucleosidase; AltName: Full=S-adenosylhomocysteine nucleosidase; Short=AdoHcy nucleosidase; Short=SAH nucleosidase; Short=SRH nucleosidase; chromosome I CDS2544258 696 + 0.498563
VC2389 carbamoyl-phosphate synthase, large subunitRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome I CDS2554049 3231 - 0.518106
VC2390 carbamoyl-phosphate synthase, small subunitRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome I CDS2557296 1140 - 0.503509
VC2416 2`,3`-cyclic-nucleotide 2`-phosphodiesterase, putativeSubName: Full=2`,3`-cyclic-nucleotide 2`-phosphodiesterase, putative; chromosome I CDS2588859 1905 + 0.460892
VC2448 CTP synthaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome I CDS2627996 1638 - 0.495726
VC2510 aspartate carbamoyltransferase, catalytic subunitRecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome I CDS2699536 993 + 0.497482
VC2511 aspartate carbamoyltransferase, regulatory subunitRecName: Full=Aspartate carbamoyltransferase regulatory chain; chromosome I CDS2700540 468 + 0.476496
VC2562 2`,3`-cyclic-nucleotide 2`-phosphodiesteraseSubName: Full=2`,3`-cyclic-nucleotide 2`-phosphodiesterase; chromosome I CDS2743382 2046 + 0.489736
VC2602 adenylosuccinate synthetaseRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome I CDS2771350 1299 - 0.489607
VC2708 guanylate kinaseRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome I CDS2879875 690 + 0.462319
VC2712 xanthine/uracil permease family proteinSubName: Full=Xanthine/uracil permease family protein; chromosome I CDS2885599 1443 + 0.510742
VC2751 adenosine deaminaseRecName: Full=Adenosine deaminase; EC=3.5.4.4; AltName: Full=Adenosine aminohydrolase; chromosome I CDS2926549 1005 + 0.491542
VCA0053 purine nucleoside phosphorylaseRecName: Full=Purine nucleoside phosphorylase DeoD-type 2; Short=PNP 2; EC=2.4.2.1; chromosome II CDS61320 738 - 0.474255
VCA0097 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS104398 717 - 0.490934
VCA0134 uridine phosphorylaseSubName: Full=Uridine phosphorylase; chromosome II CDS148508 732 + 0.515027
VCA0179 NupC family proteinSubName: Full=NupC family protein; chromosome II CDS196603 1209 + 0.497105
VCA0197 GMP reductaseRecName: Full=GMP reductase; EC=1.7.1.7; AltName: Full=Guanosine 5-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase; chromosome II CDS213207 1044 + 0.510536
VCA0308 deoxyguanosinetriphosphate triphosphohydrolase-related proteinRecName: Full=Deoxyguanosinetriphosphate triphosphohydrolase-like protein 2; chromosome II CDS319962 1209 + 0.387097
VCA0511 anaerobic ribonucleoside-triphosphate reductaseSubName: Full=Anaerobic ribonucleoside-triphosphate reductase; chromosome II CDS440291 2121 + 0.463932
VCA0545 5`-nucleotidase, putativeSubName: Full=5`-nucleotidase, putative; chromosome II CDS481978 1743 + 0.48537
VCA0614 formate--tetrahydrofolate ligaseRecName: Full=Formate--tetrahydrofolate ligase; EC=6.3.4.3; AltName: Full=Formyltetrahydrofolate synthetase; Short=FHS; Short=FTHFS; chromosome II CDS548029 1800 + 0.518889
VCA0840 deoxycytidylate deaminase, putativeSubName: Full=Deoxycytidylate deaminase, putative; chromosome II CDS784587 486 + 0.469136
VCA0925 dihydroorotaseRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome II CDS878819 1053 + 0.528015
VCA1018 ada regulatory proteinSubName: Full=Ada regulatory protein; chromosome II CDS966084 1359 - 0.504783