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2024-05-18 04:19:19

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Bradyrhizobium japonicum USDA 110, USDA110

Number of genes found: 97

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Bradyrhizobium japonicum USDA 110, USDA110
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
amn AMP nucleosidaseSubName: Full=AMP nucleosidase; chromosome CDS8673168 1533 - 0.664057
apt adenine phosphoribosyltransferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome CDS2715273 540 + 0.666667
bll0007 RecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS6036 2172 - 0.639963
bll0673 RecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; chromosome CDS719282 636 - 0.683962
bll0878 SubName: Full=Bll0878 protein; chromosome CDS951356 330 - 0.569697
bll1544 SubName: Full=Bll1544 protein; chromosome CDS1685438 414 - 0.596618
bll2650 SubName: Full=Bll2650 protein; chromosome CDS2896148 555 - 0.646847
bll2654 SubName: Full=Bll2654 protein; chromosome CDS2900793 1659 - 0.657625
bll2681 SubName: Full=Bll2681 protein; chromosome CDS2936869 1374 - 0.677584
bll3034 SubName: Full=Bll3034 protein; chromosome CDS3351559 315 - 0.67619
bll3116 SubName: Full=Bll3116 protein; chromosome CDS3440586 921 - 0.675353
bll3117 RecName: Full=Putative thymidine phosphorylase; EC=2.4.2.4; AltName: Full=TdRPase; chromosome CDS3441503 1542 - 0.671855
bll3347 SubName: Full=Bll3347 protein; chromosome CDS3706692 1482 - 0.633603
bll3830 SubName: Full=Bll3830 protein; chromosome CDS4248408 1197 - 0.675021
bll3846 hydrolaseSubName: Full=Hydrolase; chromosome CDS4263815 1206 - 0.655887
bll3847 SubName: Full=Bll3847 protein; chromosome CDS4265100 1242 - 0.655395
bll4121 SubName: Full=Bll4121 protein; chromosome CDS4557471 1503 - 0.689953
bll4780 SubName: Full=Bll4780 protein; chromosome CDS5296449 453 - 0.615894
bll5009 SubName: Full=Bll5009 protein; chromosome CDS5552043 564 - 0.508865
bll5379 RecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS5924632 894 - 0.629754
bll6142 RecName: Full=Adenine deaminase 2; Short=Adenase 2; Short=Adenine aminase 2; EC=3.5.4.2; chromosome CDS6755605 1878 - 0.659212
bll6159 SubName: Full=Bll6159 protein; chromosome CDS6776495 1368 - 0.672515
bll6615 SubName: Full=Bll6615 protein; chromosome CDS7289939 510 - 0.592157
bll6811 SubName: Full=Bll6811 protein; chromosome CDS7508415 744 - 0.662634
bll7199 SubName: Full=Bll7199 protein; chromosome CDS7922693 1374 - 0.673945
bll7276 SubName: Full=Bll7276 protein; chromosome CDS8005574 1275 - 0.668235
bll8001 SubName: Full=Bll8001 protein; chromosome CDS8791266 747 - 0.606426
bll8171 transcriptional regulatory proteinSubName: Full=Transcriptional regulatory protein; chromosome CDS8972466 597 - 0.693467
blr0077 SubName: Full=Blr0077 protein; chromosome CDS68941 1425 + 0.545965
blr0249 SubName: Full=Blr0249 protein; chromosome CDS245169 1611 + 0.641837
blr0960 RecName: Full=S-methyl-5-thioadenosine phosphorylase; EC=2.4.2.28; AltName: Full=5-methylthioadenosine phosphorylase; Short=MTA phosphorylase; Short=MTAP; chromosome CDS1049956 876 + 0.663242
blr2118 SubName: Full=Blr2118 protein; chromosome CDS2294570 570 + 0.54386
blr3005 SubName: Full=Blr3005 protein; chromosome CDS3317096 813 + 0.704797
blr3165 RecName: Full=Adenine deaminase 1; Short=Adenase 1; Short=Adenine aminase 1; EC=3.5.4.2; chromosome CDS3501772 1803 + 0.674432
blr3295 D-hydantoinaseSubName: Full=D-hydantoinase; EC=3.5.2.2; chromosome CDS3651570 1461 + 0.648186
blr3333 D-hydantoinaseSubName: Full=D-hydantoinase; EC=3.5.2.2; chromosome CDS3690165 1470 + 0.665306
blr3880 SubName: Full=Blr3880 protein; chromosome CDS4303362 1398 + 0.631617
blr3969 SubName: Full=Blr3969 protein; chromosome CDS4406560 1074 + 0.689013
blr4705 SubName: Full=Blr4705 protein; chromosome CDS5210812 927 + 0.651564
blr5100 RecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS5656633 1311 + 0.677346
blr5135 SubName: Full=Blr5135 protein; chromosome CDS5691714 429 + 0.638695
blr5621 SubName: Full=Blr5621 protein; chromosome CDS6181378 1251 + 0.673062
blr5879 SubName: Full=Blr5879 protein; chromosome CDS6459557 348 + 0.646552
blr6153 SubName: Full=Blr6153 protein; chromosome CDS6769329 480 + 0.7
blr6162 SubName: Full=Blr6162 protein; chromosome CDS6781568 1398 + 0.668813
blr6244 hydrolaseSubName: Full=Hydrolase; chromosome CDS6867253 1359 + 0.686534
blr6250 phosphoribosyltransferaseSubName: Full=Phosphoribosyltransferase; chromosome CDS6873259 714 + 0.658263
blr7209 SubName: Full=Blr7209 protein; chromosome CDS7932596 720 + 0.665278
blr7496 nitrogen fixation proteinRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS8232646 459 + 0.642702
blr8122 SubName: Full=Blr8122 protein; chromosome CDS8913815 519 + 0.630058
bsl5728 SubName: Full=Bsl5728 protein; chromosome CDS6291663 240 - 0.641667
carA carbamoylphosphate synthase small chainRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS8108450 1191 + 0.645676
carB carbamoylphosphate synthase large subunitRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome CDS8114046 3465 + 0.649351
cmk cytidylate monophosphate kinaseRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; chromosome CDS787230 639 + 0.657277
dcd 2'-deoxycytidine 5'-triphosphate deaminaseSubName: Full=2-deoxycytidine 5-triphosphate deaminase; chromosome CDS1219859 1137 + 0.670185
dgt deoxyguanosinetriphosphate triphosphohydrolaseRecName: Full=Deoxyguanosinetriphosphate triphosphohydrolase-like protein; chromosome CDS5267753 1209 - 0.66584
dht dihydropyrimidinaseSubName: Full=Dihydropyrimidinase; chromosome CDS8356212 1455 + 0.658419
dut deoxyuridine 5'-triphosphate nucleotidohydrolaseRecName: Full=Deoxyuridine 5-triphosphate nucleotidohydrolase; Short=dUTPase; EC=3.6.1.23; AltName: Full=dUTP pyrophosphatase; chromosome CDS811903 459 - 0.708061
garS 5'-phosphoribosyl-5-aminoimidazole synthetaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; chromosome CDS4562776 1074 + 0.679702
gmk guanylate kinaseRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome CDS4521329 660 + 0.663636
gpt xanthine-guanine phosphoribosyltransferaseRecName: Full=Xanthine phosphoribosyltransferase; EC=2.4.2.22; AltName: Full=Xanthine-guanine phosphoribosyltransferase; Short=XGPRT; chromosome CDS6170477 531 - 0.6742
guaA GMP synthaseSubName: Full=GMP synthase; chromosome CDS592347 804 - 0.676617
guaA GMP synthaseRecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome CDS4425934 1656 + 0.648551
ndk nucleoside diphosphate kinaseRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome CDS4556095 423 + 0.63357
nrdB ribonucleoside-diphosphate reductase beta subunitRecName: Full=Ribonucleoside-diphosphate reductase subunit beta; EC=1.17.4.1; chromosome CDS4972 1083 - 0.621422
nrdE ribonucleoside-diphosphate reductase 2 alpha chainRecName: Full=Vitamin B12-dependent ribonucleotide reductase; EC=1.17.4.1; AltName: Full=Ribonucleoside-diphosphate reductase NrdJ; chromosome CDS4708919 3765 - 0.654449
nudD GDP-mannose mannosyl hydrolaseSubName: Full=GDP-mannose mannosyl hydrolase; EC=3.6.1.-; chromosome CDS2804803 435 - 0.685057
pcaB 3-carboxy-cis,cis-muconate cycloisomeraseRecName: Full=3-carboxy-cis,cis-muconate cycloisomerase; EC=5.5.1.2; AltName: Full=3-carboxymuconate lactonizing enzyme; Short=CMLE; chromosome CDS6226400 1356 + 0.686578
pcaB SubName: Full=PcaB protein; chromosome CDS8718121 1362 - 0.665198
prsA ribose-phosphate pyrophosphokinaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; Short=P-Rib-PP synthase; Short=PRPP synthase; chromosome CDS8186337 996 + 0.660643
purA adenylosuccinate synthetaseRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome CDS7765659 1293 - 0.674401
purB adenylosuccinate lyaseSubName: Full=Adenylosuccinate lyase; chromosome CDS6250780 1308 + 0.657492
purC RecName: Full=Putative phosphoribosylaminoimidazole-succinocarboxamide synthase B; EC=6.3.2.6; AltName: Full=SAICAR synthetase 2; chromosome CDS870860 915 - 0.665574
purC phosphoribosylaminoimidazole-succinocarboxamidesynthaseRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase A; EC=6.3.2.6; AltName: Full=SAICAR synthetase A; chromosome CDS6291916 768 - 0.613281
purD phosphoribosylamine--glycine ligaseRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome CDS8234196 1284 - 0.672118
purE phosphoribosylaminoimidazole carboxylase catalytic subunitRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; chromosome CDS7831499 489 + 0.691207
purF amidophosphoribosyltransferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome CDS4492203 1524 - 0.669291
purH bifunctional purine biosynthesis proteinRecName: Full=Bifunctional purine biosynthesis protein PurH; Includes: RecName: Full=Phosphoribosylaminoimidazolecarboxamide formyltransferase; EC=2.1.2.3; AltName: Full=AICAR transformylase; Includes: RecName: Full=IMP cyclohydrolase; EC=3.5.4.10; AltName: Full=ATIC; AltName: Full=IMP synthase; AltName: Full=Inosinicase; chromosome CDS625357 1593 + 0.667922
purK phosphoribosylaminoimidazole carboxylase ATPase subunitSubName: Full=Phosphoribosylaminoimidazole carboxylase ATPase subunit; chromosome CDS7831984 1107 + 0.663957
purL phosphoribosylformylglycinamidine synthetase IIRecName: Full=Phosphoribosylformylglycinamidine synthase 2; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase II; Short=FGAM synthase II; chromosome CDS6283610 2211 - 0.67526
purN 5'-phosphoribosylglycinamide formyltransferaseSubName: Full=5-phosphoribosylglycinamide formyltransferase; chromosome CDS4563846 657 + 0.659056
purQ phosphoribosylformylglycinamidine synthase IRecName: Full=Phosphoribosylformylglycinamidine synthase 1; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase I; Short=FGAM synthase I; chromosome CDS6288505 702 - 0.656695
purU formyltetrahydrofolate deformylaseSubName: Full=Formyltetrahydrofolate deformylase; chromosome CDS6549323 864 - 0.638889
pyrB aspartate carbamoyl transferaseRecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome CDS5655689 948 + 0.651899
pyrC dihydroorotaseSubName: Full=Dihydroorotase; EC=3.5.2.3; chromosome CDS2799447 1335 + 0.675655
pyrD dihydroorotate dehydrogenaseRecName: Full=Dihydroorotate dehydrogenase (quinone); EC=1.3.5.2; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase; chromosome CDS1252349 1098 + 0.689435
pyrE Orotate phosphoribosyltransferaseRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome CDS8929564 672 + 0.662202
pyrF orotidine 5'-monophosphateRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome CDS729677 714 + 0.676471
pyrG CTP synthaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome CDS5324048 1632 - 0.636642
pyrH uridylate kinaseRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome CDS5383539 756 - 0.669312
soxB sulfur oxidation proteinSubName: Full=Sulfur oxidation protein; chromosome CDS1115453 1773 - 0.65595
soxB SubName: Full=SoxB protein; chromosome CDS3882099 1692 + 0.643617
thyA thymidylate synthaseRecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome CDS7169333 795 - 0.626415
tmk thymydilate kinaseRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome CDS5005842 687 - 0.6754
upp SubName: Full=Upp protein; chromosome CDS7484838 447 + 0.680089
upp uracil phosphoribosyltransferaseRecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; chromosome CDS7961305 630 + 0.657143
uraA uracil transport proteinSubName: Full=Uracil transport protein; chromosome CDS7908408 1320 - 0.655303