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2024-05-03 10:32:10

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Vibrio parahaemolyticus RIMD 2210633, O3:K6

Number of genes found: 90

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Vibrio parahaemolyticus RIMD 2210633, O3:K6
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VP0066 xanthosine phosphorylasechromosome 1 CDS74536 858 - 0.504662
VP0116 adenosine deaminasechromosome 1 CDS122259 1005 - 0.491542
VP0156 xanthine/uracil permease family proteinchromosome 1 CDS166911 1413 - 0.491154
VP0161 guanylate kinasechromosome 1 CDS174090 624 - 0.440705
VP0178 orotate phosphoribosyltransferasechromosome 1 CDS191665 642 + 0.482866
VP0232 putative carbamoylphosphate synthase large subunit, short formchromosome 1 CDS244604 966 + 0.400621
VP0290 2',3'-cyclic-nucleotide 2'-phosphodiesterasechromosome 1 CDS286106 1956 - 0.46728
VP0470 carbamoyl-phosphate synthase, small subunitchromosome 1 CDS474811 1140 + 0.47807
VP0471 carbamoyl-phosphate synthase, large subunitchromosome 1 CDS475967 3234 + 0.479283
VP0479 MTA/SAH nucleosidasechromosome 1 CDS485380 696 - 0.445402
VP0524 thymidylate synthasechromosome 1 CDS540798 852 + 0.455399
VP0572 exopolyphosphatasechromosome 1 CDS595216 1506 - 0.47344
VP0604 nucleoside diphosphate kinasechromosome 1 CDS629017 426 + 0.464789
VP0617 GMP synthasechromosome 1 CDS642937 1554 + 0.466538
VP0663 YfhC proteinchromosome 1 CDS692635 486 + 0.485597
VP0666 phosphoribosylformylglycinamidine synthasechromosome 1 CDS695498 3909 + 0.490918
VP0673 xanthine-guanine phosphoribosyltransferasechromosome 1 CDS706791 465 + 0.458065
VP0696 minor nuclease C1B isoform precursorchromosome 1 CDS728464 753 - 0.468792
VP0702 Syd proteinchromosome 1 CDS736980 546 + 0.457875
VP0739 ribose-phosphate pyrophosphokinasechromosome 1 CDS776646 945 - 0.467725
VP0748 5'-nucleotidase precursorchromosome 1 CDS784866 1683 + 0.45514
VP0822 adenylate kinasechromosome 1 CDS851266 645 + 0.448062
VP0860 histidine triad family proteinchromosome 1 CDS893838 447 - 0.458613
VP0864 formyltetrahydrofolate deformylasechromosome 1 CDS897019 834 - 0.438849
VP0878 NupC family proteinchromosome 1 CDS910217 1200 + 0.46
VP0925 deoxyguanosinetriphosphate triphosphohydrolasechromosome 1 CDS961908 1323 - 0.470144
VP0960 uridine phosphorylasechromosome 1 CDS1002472 759 + 0.469038
VP0964 Hit family proteinchromosome 1 CDS1006963 351 + 0.45584
VP1002 hypothetical proteinchromosome 1 CDS1047439 2721 + 0.458287
VP1099 tRNA-(MS[2]IO[6]A)-hydroxylasechromosome 1 CDS1156396 771 - 0.439689
VP1128 adenylosuccinate lyasechromosome 1 CDS1184447 1371 - 0.469001
VP1151 thymidine kinasechromosome 1 CDS1208873 579 + 0.454231
VP1207 UDP-sugar hydrolasechromosome 1 CDS1267185 1695 - 0.440708
VP1261 hypothetical proteinchromosome 1 CDS1335073 378 + 0.425926
VP1263 putative phosphoribosylaminoimidazole-succinocarboxamide synthasechromosome 1 CDS1337584 1104 - 0.435688
VP1297 phosphoribosylglycinamide formyltransferase 2chromosome 1 CDS1376818 1176 - 0.468537
VP1298 cytidine deaminasechromosome 1 CDS1378141 888 - 0.46509
VP1561 bacteriophage f237 ORF8chromosome 1 CDS1665561 1494 + 0.369478
VP1601 dihydroorotate dehydrogenasechromosome 1 CDS1691830 1011 - 0.443126
VP1760 putative adenylate cyclasechromosome 1 CDS1876206 546 - 0.443223
VP1816 putative Hit protein involved in cell-cycle regulationchromosome 1 CDS1920735 417 - 0.388489
VP1912 hypothetical proteinchromosome 1 CDS1997772 390 - 0.438462
VP1934 ribonucleoside-diphosphate reductase, alpha subunitchromosome 1 CDS2021077 2283 + 0.465177
VP1935 ribonucleoside-diphosphate reductase, beta subunitchromosome 1 CDS2023441 1134 + 0.443563
VP2026 orotidine 5'-phosphate decarboxylasechromosome 1 CDS2124152 702 - 0.451567
VP2031 cytidylate kinasechromosome 1 CDS2128950 681 - 0.487518
VP2049 thymidylate kinasechromosome 1 CDS2150113 633 - 0.480253
VP2067 uridine kinasechromosome 1 CDS2169970 642 - 0.46729
VP2180 adenine phosphoribosyltransferasechromosome 1 CDS2290620 546 - 0.452381
VP2185 amidophosphoribosyltransferasechromosome 1 CDS2294451 1515 - 0.473267
VP2283 uracil permeasechromosome 1 CDS2391242 1254 + 0.49362
VP2284 uracil phosphoribosyltransferasechromosome 1 CDS2392600 627 - 0.437002
VP2285 phosphoribosylformylglycinamidine cyclo-ligasechromosome 1 CDS2393407 1041 + 0.477426
VP2286 phosphoribosylglycinamide formyltransferasechromosome 1 CDS2394577 648 + 0.462963
VP2316 uridylate kinasechromosome 1 CDS2428330 732 - 0.474044
VP2430 hypothetical proteinchromosome 1 CDS2549778 2349 + 0.458919
VP2433 purine nucleoside phosphorylasechromosome 1 CDS2553935 720 - 0.463889
VP2435 thymidine phosphorylasechromosome 1 CDS2556083 1329 - 0.492099
VP2436 deoxyribose-phosphate aldolasechromosome 1 CDS2557509 777 - 0.455598
VP2437 NupC family proteinchromosome 1 CDS2558867 1284 - 0.468847
VP2515 hypoxanthine ribosyl transferasechromosome 1 CDS2652366 531 - 0.421846
VP2562 CTP synthasechromosome 1 CDS2705768 1641 - 0.466789
VP2621 Ham1 proteinchromosome 1 CDS2762552 603 + 0.482587
VP2654 aspartate carbamoyltransferase, catalytic subunitchromosome 1 CDS2807192 930 + 0.48172
VP2655 aspartate carbamoyltransferase, regulatory subunitchromosome 1 CDS2808137 462 + 0.417749
VP2728 hypothetical proteinchromosome 1 CDS2894681 141 - 0.468085
VP2812 adenylosuccinate synthetasechromosome 1 CDS2975587 1317 - 0.458618
VP2896 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolasechromosome 1 CDS3080614 1593 + 0.500942
VP2898 phosphoribosylamine-glycine ligasechromosome 1 CDS3082360 1290 + 0.504651
VP2987 adenylate cyclasechromosome 1 CDS3185161 2529 - 0.478845
VP3003 guanosine-5'-triphosphate,3'-diphosphatepyrophos phatasechromosome 1 CDS3206155 1494 + 0.487282
VP3036 phosphoribosylaminoimidazole carboxylase, catalytic subunitchromosome 1 CDS3243729 486 + 0.512346
VP3037 phosphoribosylaminoimidazole carboxylase, ATPase subunitchromosome 1 CDS3244219 1134 + 0.504409
VPA0195 NupC family proteinchromosome 2 CDS193626 1209 + 0.468156
VPA0295 hypothetical proteinchromosome 2 CDS294404 1566 - 0.480204
VPA0308 conserved hypothetical proteinchromosome 2 CDS307784 726 - 0.490358
VPA0375 putative adenylosuccinate synthasechromosome 2 CDS372186 1257 - 0.487669
VPA0408 dihydroorotasechromosome 2 CDS403875 1029 - 0.487852
VPA0834 formate-tetrahydrofolate ligasechromosome 2 CDS870481 1749 - 0.460263
VPA0855 putative 5'-nucleotidasechromosome 2 CDS891297 1743 + 0.449225
VPA0941 anaerobic ribonucleoside-triphosphate reductasechromosome 2 CDS972685 2121 - 0.461103
VPA1020 hypothetical proteinchromosome 2 CDS1072830 525 - 0.422857
VPA1079 uridine phosphorylasechromosome 2 CDS1139090 732 - 0.472678
VPA1089 putative 5'-methylthioadenosine/S-adenosylhomocysteine nuclosidasechromosome 2 CDS1150171 759 - 0.444005
VPA1159 GMP reductasechromosome 2 CDS1224168 1047 - 0.481375
VPA1192 putative deoxycytidylate deaminasechromosome 2 CDS1264867 465 + 0.464516
VPA1242 cytosine permease/transportchromosome 2 CDS1316197 1239 + 0.486683
VPA1243 putative cytosine deaminasechromosome 2 CDS1317445 1278 + 0.468701
VPA1292 adenosine deaminasechromosome 2 CDS1369910 1014 + 0.446746
VPA1475 purine nucleoside phosphorylasechromosome 2 CDS1574192 711 + 0.468354