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2024-05-19 00:29:11

Gene list

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COG category: Nucleotide transport and metabolism
Organism: Ralstonia solanacearum GMI1000, GMI1000

Number of genes found: 84

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Ralstonia solanacearum GMI1000, GMI1000
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
RSc0195 CONSERVED HYPOTHETICAL PROTEINRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS216164 1854 + 0.634844
RSc0202 PROBABLE RIBOSE-PHOSPHATE PYROPHOSPHOKINASE PROTEINSubName: Full=Probable ribose-phosphate pyrophosphokinase protein; EC=2.7.6.1; chromosome CDS224606 963 + 0.626168
RSc0213 PUTATIVE GLUTAMINE AMIDOTRANSFERASE PROTEINSubName: Full=Putative glutamine amidotransferase protein; EC=6.3.-.-; chromosome CDS235682 717 - 0.627615
RSc0245 HYPOTHETICAL/UNKNOWN PROTEIN chromosome CDS269437 1479 - 0.69236
RSc0455 HYPOTHETICAL PROTEINSubName: Full=Putative nucleotide-binding protein; chromosome CDS486293 444 + 0.740991
RSc0744 PUTATIVE DNA/RNA NON-SPECIFIC ENDONUCLEASE PROTEINSubName: Full=Putative dna/rna non-specific endonuclease protein; EC=3.1.30.-; chromosome CDS790072 828 - 0.676328
RSc0745 CONSERVED HYPOTHETICAL PROTEINSubName: Full=Putative cog3613, nucleoside 2-deoxyribosyltransferase protein; chromosome CDS790953 486 + 0.6893
RSc0798 PUTATIVE PURINE NUCLEOSIDE PERMEASE PROTEINSubName: Full=Putative purine nucleoside permease protein; chromosome CDS844216 1146 + 0.69808
RSc0799 PUTATIVE PURINE NUCLEOSIDE PERMEASE PROTEINSubName: Full=Putative purine nucleoside permease protein; chromosome CDS845358 1041 + 0.689721
RSc0801 PUTATIVE LIPOPROTEIN TRANSMEMBRANESubName: Full=Putative lipoprotein transmembrane; chromosome CDS848744 738 + 0.684282
RSc0809 HYPOTHETICAL PROTEINSubName: Full=Putative hydrolase protein; chromosome CDS856154 582 + 0.695876
RSc1158 CONSERVED HYPOTHETICAL PROTEINSubName: Full=Putative glutamine amidotransferase, classI active site protein; chromosome CDS1217630 729 - 0.740741
RSc1233 PROBABLE TRANSPORTER TRANSMEMBRANE PROTEINSubName: Full=Probable permease transmembrane protein; chromosome CDS1304554 1509 + 0.675282
RSc1385 PROBABLE LIPOPROTEIN TRANSMEMBRANESubName: Full=Probable lipoprotein transmembrane; chromosome CDS1476846 375 + 0.698667
RSc1389 CONSERVED HYPOTHETICAL PROTEINSubName: Full=Putative adenylate cyclase protein; chromosome CDS1481857 519 - 0.703276
RSc1451 PUTATIVE HYDROLASE PROTEINRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS1552553 552 + 0.722826
RSc1618 HYPOTHETICAL PROTEINSubName: Full=Probable hydrolase protein; chromosome CDS1736706 588 - 0.647959
RSc2118 PUTATIVE XANTHINE PERMEASE TRANSMEMBRANE PROTEINSubName: Full=Putative xanthine permease transmembrane protein; chromosome CDS2294273 1407 + 0.694385
RSc2160 CONSERVED HYPOTHETICAL PROTEINRecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; chromosome CDS2342984 606 + 0.717822
RSc2548 PUTATIVE INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE TRANSMEMBRANE PROTEINSubName: Full=Putative inosine-uridine preferring nucleoside hydrolase transmembrane protein; EC=3.2.2.1; chromosome CDS2756991 1056 - 0.692235
RSc2629 PUTATIVE DEOXYGUANOSINE KINASE (DGUO KINASE) (DGK) PROTEINSubName: Full=Putative deoxyguanosine kinase (Dguo kinase) (Dgk) protein; EC=2.7.1.113; chromosome CDS2831919 645 + 0.68062
RSc2703 HYPOTHETICAL PROTEINSubName: Full=Uncharacterized protein; chromosome CDS2909829 399 + 0.614035
RSc2766 PROBABLE GUANYL-SPECIFIC RIBONUCLEASE PRECURSOR SIGNAL PEPTIDE PROTEINSubName: Full=Probable guanyl-specific ribonuclease signal peptide protein; EC=3.1.27.3; chromosome CDS2976770 432 - 0.641204
RSc3253 PROBABLE SULFUR OXIDATION SIGNAL PEPTIDE PROTEINSubName: Full=Probable sulfur oxidation signal peptide protein; chromosome CDS3508552 1719 - 0.712624
RSc3274 PUTATIVE ALLANTOICASE (ALLANTOINE AMIDINOHYDROLASE) PROTEINRecName: Full=Probable allantoicase; EC=3.5.3.4; AltName: Full=Allantoate amidinohydrolase; chromosome CDS3524919 1011 - 0.684471
RSp0207 HYPOTHETICAL SIGNAL PEPTIDE PROTEIN megaplasmid CDS255713 489 - 0.574642
RSp0551 PROBABLE HYDROLASE TRANSMEMBRANE PROTEINSubName: Full=Putative deaminase transmembrane protein; EC=3.-.-.-; megaplasmid CDS693223 1431 + 0.682739
RSp1072 CONSERVED HYPOTHETICAL PROTEINSubName: Full=Uncharacterized protein; megaplasmid CDS1354324 402 - 0.420398
add PROBABLE ADENOSINE DEAMINASE PROTEINRecName: Full=Adenine deaminase; Short=ADE; EC=3.5.4.2; AltName: Full=Adenine aminohydrolase; Short=AAH; chromosome CDS2272333 1038 + 0.681118
adk PROBABLE ADENYLATE KINASE (ATP-AMP TRANSPHOSPHORYLASE) PROTEINRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS2740594 669 + 0.651719
amn PROBABLE AMP NUCLEOSIDASE PROTEINSubName: Full=Probable amp nucleosidase protein; EC=3.2.2.4; megaplasmid CDS263088 1482 - 0.693657
apt PROBABLE ADENINE PHOSPHORIBOSYLTRANSFERASE (APRT) PROTEINRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome CDS444221 696 + 0.678161
atzB PROBABLE HYDROXY-ATRAZINE ETHYL AMINO HYDROLASE PROTEINSubName: Full=Probable chlorohydrolase protein; chromosome CDS2295684 1425 + 0.725614
carA PROBABLE CARBAMOYL-PHOSPHATE SYNTHASE (SMALL CHAIN) PROTEINRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS1621137 1137 + 0.658751
carB PROBABLE CARBAMOYL-PHOSPHATE SYNTHASE (LARGE CHAIN) PROTEINRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome CDS1622987 3246 + 0.660505
cmk PROBABLE CYTIDYLATE KINASE PROTEINRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; chromosome CDS959775 693 + 0.636364
codA PROBABLE CYTOSINE DEAMINASE (CYTOSINE AMINOHYDROLASE) PROTEINSubName: Full=Probable cytosine deaminase (Cytosine aminohydrolase) protein; EC=3.5.4.1; chromosome CDS1709193 1272 + 0.705975
cpdB PROBABLE 2',3'-CYCLIC-NUCLEOTIDE 2'-PHOSPHODIESTERASE PRECURSOR TRANSMEMBRANE PROTEINSubName: Full=Probable 2,3-cyclic-nucleotide 2-phosphodiesterase transmembrane protein; EC=3.1.4.16; chromosome CDS3621887 2046 - 0.676442
dcd PROBABLE DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE PROTEINRecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase; EC=3.5.4.13; chromosome CDS2570580 567 - 0.626102
deoA PUTATIVE THYMIDINE/PYRIMIDINE-NUCLEOSIDE PHOSPHORYLASE PROTEINRecName: Full=Putative thymidine phosphorylase; EC=2.4.2.4; AltName: Full=TdRPase; chromosome CDS225922 1524 + 0.631234
dgt PROBABLE DEOXYGUANOSINE TRIPHOSPHATE TRIPHOSPHOHYDROLASE PROTEINRecName: Full=Deoxyguanosinetriphosphate triphosphohydrolase-like protein; chromosome CDS3200115 1164 - 0.658935
dut DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE DUTPASE PROTEINRecName: Full=Deoxyuridine 5-triphosphate nucleotidohydrolase; Short=dUTPase; EC=3.6.1.23; AltName: Full=dUTP pyrophosphatase; chromosome CDS2671731 447 + 0.697987
gmk PROBABLE GUANYLATE KINASE (GMP KINASE) PROTEINRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome CDS2338353 666 - 0.677177
guaA PROBABLE GMP SYNTHASE GLUTAMINE-HYDROLYZING (GLUTAMINE AMIDOTRANSFERASE) PROTEINRecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome CDS1530159 1644 + 0.656934
guaB PROBABLE INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE OXIDOREDUCTASE PROTEINRecName: Full=Inosine-5-monophosphate dehydrogenase; Short=IMP dehydrogenase; Short=IMPD; Short=IMPDH; EC=1.1.1.205; chromosome CDS1528044 1464 + 0.669399
guaD PROBABLE GUANINE DEAMINASE (GUANINE AMINOHYDROLASE) (GAH) PROTEINSubName: Full=Probable guanine deaminase (Guanine aminohydrolase) (Gah) protein; EC=3.5.4.3; chromosome CDS2273388 1338 + 0.704036
hit PUTATIVE HIT-LIKE PROTEINSubName: Full=Putative hit-like protein; megaplasmid CDS618178 435 - 0.701149
hprT PROBABLE HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE TRANSMEMBRANE PROTEINSubName: Full=Probable hypoxanthine phosphoribosyltransferase transmembrane protein; EC=2.4.2.8; chromosome CDS3026111 549 + 0.648452
ndk PROBABLE NUCLEOSIDE-DIPHOSPHATE KINASE PROTEINRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome CDS1280175 426 + 0.600939
nrdA PUTATIVE RIBONUCLEOSIDE REDUCTASE 1 (LARGE CHAIN) OXIDOREDUCTASE PROTEINRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS3015477 2964 - 0.663293
nrdB PUTATIVE TRANSMEMBRANE RIBONUCLEOSIDE REDUCTASE (SMALL CHAIN) OXIDOREDUCTASE PROTEINRecName: Full=Ribonucleoside-diphosphate reductase subunit beta; EC=1.17.4.1; chromosome CDS3014124 1203 - 0.635079
nrdD PUTATIVE RIBONUCLEOTIDE REDUCTASE OXIDOREDUCTASE PROTEINSubName: Full=Putative ribonucleotide reductase oxidoreductase protein; EC=1.17.4.2; megaplasmid CDS1215605 2052 + 0.676413
pcaB PROBABLE 3-CARBOXY-CIS,CIS-MUCONATE CYCLOISOMERASE PROTEINSubName: Full=Probable 3-carboxy-cis,cis-muconate cycloisomerase protein; EC=5.5.1.2; chromosome CDS2443255 1362 - 0.749633
pfs PROBABLE BIFUNCTIONAL PROTEIN (MTA/SAH NUCLEOSIDASE) (P46): 5'-METHYLTHIOADENOSINE NUCLEOSIDASE AND S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASESubName: Full=Probable bifunctional protein (Mta/sah nucleosidase) (P46): 5-methylthioadenosine nucleosidase and s-adenosylhomocysteine nucleosidase; EC=3.2.2.16; EC=3.2.2.9; chromosome CDS3635277 786 + 0.703562
ppx PROBABLE EXOPOLYPHOSPHATASE PROTEINSubName: Full=Probable exopolyphosphatase protein; EC=3.6.1.11; chromosome CDS1642415 1584 + 0.669823
prsA PROBABLE RIBOSE-PHOSPHATE PYROPHOSPHOKINASE PROTEINRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; Short=P-Rib-PP synthase; Short=PRPP synthase; chromosome CDS422019 951 - 0.640379
purA PROBABLE ADENYLOSUCCINATE SYNTHETASE PROTEINRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome CDS1295663 1341 + 0.65921
purB PROBABLE ADENYLOSUCCINATE LYASE PROTEINSubName: Full=Probable adenylosuccinate lyase protein; EC=4.3.2.2; chromosome CDS2925755 1374 - 0.667394
purC PROBABLE PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYNTHASE PROTEINRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome CDS618408 909 + 0.682068
purD PROBABLE PHOSPHORIBOSYLAMINE--GLYCINE LIGASE PROTEINRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome CDS2373410 1269 + 0.686367
purE PROBABLE PHOSPHORIBOSYLAMINOIMIDAZOLE CARBOXYLASE CATALYTIC SUBUNIT PROTEINRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; chromosome CDS619330 510 + 0.698039
purF PROBABLE AMIDOPHOSPHORIBOSYLTRANSFERASE PROTEINRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome CDS2150306 1536 - 0.667969
purH PROBABLE BIFUNCTIONAL : PHOSPHORIBOSYLAMINOIMIDAZOLECARBOXAMIDE FORMYLTRANSFERASE AND IMP CYCLOHYDROLASE TRANSMEMBRANE PROTEINRecName: Full=Bifunctional purine biosynthesis protein PurH; Includes: RecName: Full=Phosphoribosylaminoimidazolecarboxamide formyltransferase; EC=2.1.2.3; AltName: Full=AICAR transformylase; Includes: RecName: Full=IMP cyclohydrolase; EC=3.5.4.10; AltName: Full=ATIC; AltName: Full=IMP synthase; AltName: Full=Inosinicase; chromosome CDS537887 1575 - 0.669841
purK PROBABLE PHOSPHORIBOSYLAMINOIMIDAZOLE CARBOXYLASE ATPASE SUBUNIT PROTEINSubName: Full=Probable phosphoribosylaminoimidazole carboxylase atpase subunit protein; EC=4.1.1.21; chromosome CDS619859 1242 + 0.702093
purL PROBABLE PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE PROTEINRecName: Full=Phosphoribosylformylglycinamidine synthase; Short=FGAM synthase; Short=FGAMS; EC=6.3.5.3; AltName: Full=Formylglycinamide ribotide amidotransferase; Short=FGARAT; AltName: Full=Formylglycinamide ribotide synthetase; chromosome CDS1842044 4110 + 0.696107
purM PROBABLE PHOSPHORIBOSYLFORMYLGLYCINAMIDINE CYCLO-LIGASE (AIRS) PROTEINRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; chromosome CDS2826032 1062 - 0.681733
purN PROBABLE PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE PROTEINSubName: Full=Probable phosphoribosylglycinamide formyltransferase protein; EC=2.1.2.2; chromosome CDS2660390 651 - 0.683564
purU1 PROBABLE FORMYLTETRAHYDROFOLATE DEFORMYLASE PROTEINSubName: Full=Probable formyltetrahydrofolate deformylase protein; EC=3.5.1.10; chromosome CDS2057091 867 - 0.649366
purU2 PROBABLE FORMYLTETRAHYDROFOLATE DEFORMYLASE PROTEINSubName: Full=Probable formyltetrahydrofolate deformylase protein; EC=3.5.1.10; megaplasmid CDS74491 873 - 0.609393
purU3 PROBABLE FORMYLTETRAHYDROFOLATE DEFORMYLASE PROTEINSubName: Full=Probable formyltetrahydrofolate deformylase protein; EC=3.5.1.10; chromosome CDS1163543 873 - 0.632302
pyrB PROBABLE ASPARTATE CARBAMOYLTRANSFERASE (CATALYTIC CHAIN) PROTEINRecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome CDS726017 972 + 0.646091
pyrC PROBABLE DIHYDROOROTASE PROTEINRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS524086 1035 + 0.690821
pyrD PROBABLE DIHYDROOROTATE DEHYDROGENASE OXIDOREDUCTASE PROTEINRecName: Full=Dihydroorotate dehydrogenase (quinone); EC=1.3.5.2; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase; chromosome CDS1737914 1035 + 0.699517
pyrE OROTATE PHOSPHORIBOSYLTRANSFERASE PROTEINRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome CDS161518 714 - 0.64986
pyrF PROBABLE OROTIDINE 5'-PHOSPHATE DECARBOXYLASE PROTEINRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome CDS2983646 867 - 0.682814
pyrG PROBABLE CTP SYNTHASE PROTEINRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome CDS1184558 1665 + 0.652853
pyrH PROBABLE URIDYLATE KINASE PROTEINRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome CDS1505835 711 + 0.646976
pyrR PUTATIVE PYRIMIDINE OPERON REGULATORY PROTEIN PYRRRecName: Full=Bifunctional protein PyrR; Includes: RecName: Full=Pyrimidine operon regulatory protein; Includes: RecName: Full=Uracil phosphoribosyltransferase; Short=UPRTase; EC=2.4.2.9; chromosome CDS725416 525 + 0.691429
pyrX PROBABLE DIHYDROOROTASE-LIKE PROTEINRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS726997 1278 + 0.697183
thyA PROBABLE THYMIDYLATE SYNTHASE (TRANSLATION REGULATION REPRESSOR RNA-BINDING) PROTEINRecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome CDS994874 795 - 0.637736
tmk PROBABLE THYMIDYLATE KINASE (DTMP KINASE) PROTEINRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome CDS1919866 618 + 0.702265
upp PROBABLE URACIL PHOSPHORIBOSYLTRANSFERASE PROTEINRecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; chromosome CDS2370069 651 + 0.680492
xdhA PUTATIVE XANTHINE DEHYDROGENASE (SUBUNIT A) OXIDOREDUCTASE PROTEINSubName: Full=Putative xanthine dehydrogenase (Subunit a) oxidoreductase protein; EC=1.17.1.4; chromosome CDS2267318 1551 + 0.700193
xdhB PROBABLE XANTHINE DEHYDROGENASE (SUBUNIT B) OXIDOREDUCTASE PROTEINSubName: Full=Probable xanthine dehydrogenase (Subunit b) oxidoreductase protein; EC=1.17.1.4; chromosome CDS2268893 2379 + 0.702816