Gene list
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COG category: Nucleotide transport and metabolism
Organism: Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18
Number of genes found: 84
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| Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| HCM2.0119c | putative thymidylate synthase | RecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; | pHCM2 | CDS | 91600 | 1116 | - | 0.540323 | |
| HCM2.0121c | putative ribonucleoside-diphosphate reductase beta subunit | SubName: Full=Putative ribonucleoside-diphosphate reductase beta subunit; EC=1.17.4.1; | pHCM2 | CDS | 93843 | 1143 | - | 0.527559 | |
| HCM2.0122c | putative ribonucleoside-diphosphate reductase alpha subunit | RecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; | pHCM2 | CDS | 95093 | 2316 | - | 0.547496 | |
| STY0040 | putative secreted 5'-nucleotidase | SubName: Full=Putative secreted 5-nucleotidase; | chromosome | CDS | 37103 | 1572 | - | 0.466921 | |
| STY0060 | putative nucleoside hydrolase (IUNH family) | RecName: Full=Non-specific ribonucleoside hydrolase RihC; EC=3.2.-.-; AltName: Full=Purine/pyrimidine ribonucleoside hydrolase; | chromosome | CDS | 60161 | 921 | + | 0.563518 | |
| STY0076 | carbamoyl-phosphate synthase small chain | RecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; | chromosome | CDS | 75696 | 1149 | + | 0.555265 | |
| STY0077 | carbamoyl-phosphate synthase large chain | RecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; | chromosome | CDS | 76860 | 3228 | + | 0.589529 | |
| STY0163 | GMP reductase | RecName: Full=GMP reductase; EC=1.7.1.7; AltName: Full=Guanosine 5-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase; | chromosome | CDS | 167200 | 1044 | + | 0.534483 | |
| STY0192 | hypoxanthine phosphoribosyltransferase | SubName: Full=Hypoxanthine phosphoribosyltransferase; | chromosome | CDS | 203004 | 537 | + | 0.504655 | |
| STY0230 | deoxyguanosinetriphosphate triphosphohydrolase | RecName: Full=Deoxyguanosinetriphosphate triphosphohydrolase; Short=dGTP triphosphohydrolase; Short=dGTPase; EC=3.1.5.1; | chromosome | CDS | 239853 | 1518 | + | 0.485507 | |
| STY0241 | uridine 5'-monophosphate kinase | RecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; | chromosome | CDS | 253160 | 726 | + | 0.535813 | |
| STY0362 | xanthine-guanine phosphoribosyltransferase | RecName: Full=Xanthine phosphoribosyltransferase; EC=2.4.2.22; AltName: Full=Xanthine-guanine phosphoribosyltransferase; Short=XGPRT; | chromosome | CDS | 371982 | 459 | + | 0.529412 | |
| STY0527 | adenine phosphoribosyltransferase | RecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; | chromosome | CDS | 533092 | 552 | + | 0.538043 | |
| STY0532 | adenylate kinase | RecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; | chromosome | CDS | 539066 | 645 | + | 0.545736 | |
| STY0572 | putative permease protein | SubName: Full=Putative permease protein; | chromosome | CDS | 578601 | 1299 | + | 0.515012 | |
| STY0581 | phosphoribosylaminoimidazole carboxylase ATPase subunit | SubName: Full=Phosphoribosylaminoimidazole carboxylase ATPase subunit; | chromosome | CDS | 589259 | 1068 | - | 0.59176 | |
| STY0582 | phosphoribosylaminoimidazole carboxylase catalytic subunit | RecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; | chromosome | CDS | 590323 | 510 | - | 0.601961 | |
| STY0980 | cytidylate kinase | RecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; | chromosome | CDS | 975505 | 684 | + | 0.555556 | |
| STY1079 | dihydroorotate dehydrogenase | RecName: Full=Dihydroorotate dehydrogenase (quinone); EC=1.3.5.2; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase; | chromosome | CDS | 1056001 | 1011 | + | 0.474777 | |
| STY1201 | dihydroorotase | RecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; | chromosome | CDS | 1158791 | 1047 | - | 0.543458 | |
| STY1239 | thymidylate kinase | RecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; | chromosome | CDS | 1193288 | 642 | + | 0.580997 | |
| STY1245 | putative protein kinase C inhibitor | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1200068 | 360 | + | 0.502778 | |
| STY1272 | adenylosuccinate lyase | SubName: Full=Adenylosuccinate lyase; | chromosome | CDS | 1228972 | 1371 | - | 0.516411 | |
| STY1294 | formyltetrahydrofolate deformylase | SubName: Full=Formyltetrahydrofolate deformylase; | chromosome | CDS | 1253291 | 843 | - | 0.507711 | |
| STY1301 | thymidine kinase | RecName: Full=Thymidine kinase; EC=2.7.1.21; | chromosome | CDS | 1259079 | 618 | + | 0.490291 | |
| STY1344 | orotidine-5'-P decarboxylase | RecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; | chromosome | CDS | 1304384 | 738 | + | 0.563686 | |
| STY1612 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome | CDS | 1549208 | 327 | + | 0.498471 | |
| STY1658 | adenosine deaminase | RecName: Full=Adenosine deaminase; EC=3.5.4.4; AltName: Full=Adenosine aminohydrolase; | chromosome | CDS | 1588650 | 1002 | + | 0.547904 | |
| STY1906 | ribose-phosphate pyrophosphokinase | RecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; Short=P-Rib-PP synthase; Short=PRPP synthase; | chromosome | CDS | 1799363 | 948 | + | 0.543249 | |
| STY2089 | phosphoribosylglycinamide formyltransferase 2 | RecName: Full=Phosphoribosylglycinamide formyltransferase 2; Short=GART 2; EC=2.1.2.-; AltName: Full=5-phosphoribosylglycinamide transformylase 2; AltName: Full=Formate-dependent GAR transformylase; AltName: Full=GAR transformylase 2; | chromosome | CDS | 1941304 | 1179 | + | 0.568278 | |
| STY2211 | AMP nucleosidase | SubName: Full=AMP nucleosidase; EC=3.2.2.4; | chromosome | CDS | 2048039 | 1455 | - | 0.540893 | |
| STY2334 | deoxycytidine triphosphate deaminase | RecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase; EC=3.5.4.13; | chromosome | CDS | 2164849 | 582 | - | 0.591065 | |
| STY2335 | uridine kinase | RecName: Full=Uridine kinase; EC=2.7.1.48; AltName: Full=Cytidine monophosphokinase; AltName: Full=Uridine monophosphokinase; | chromosome | CDS | 2165521 | 642 | - | 0.468847 | |
| STY2413 | cytidine deaminase | RecName: Full=Cytidine deaminase; EC=3.5.4.5; AltName: Full=Cytidine aminohydrolase; Short=CDA; | chromosome | CDS | 2244749 | 885 | + | 0.563842 | |
| STY2506 | ribonucleoside-diphosphate reductase 1 alpha chain | RecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; | chromosome | CDS | 2339060 | 2286 | + | 0.534996 | |
| STY2507 | ribonucleoside-diphosphate reductase 1 beta chain | SubName: Full=Ribonucleoside-diphosphate reductase 1 beta chain; EC=1.17.4.1; | chromosome | CDS | 2341458 | 1131 | + | 0.516357 | |
| STY2592 | amidophosphoribosyltransferase | RecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; | chromosome | CDS | 2429356 | 1518 | - | 0.534256 | |
| STY2650 | nucleoside permease NupC | SubName: Full=Nucleoside permease NupC; | chromosome | CDS | 2485913 | 1203 | + | 0.504572 | |
| STY2658 | xanthosine phosphorylase | RecName: Full=Purine nucleoside phosphorylase; EC=2.4.2.1; AltName: Full=Inosine-guanosine phosphorylase; | chromosome | CDS | 2495466 | 834 | - | 0.532374 | |
| STY2675 | putative amidotransferase | SubName: Full=Putative amidotransferase; | chromosome | CDS | 2510629 | 720 | + | 0.541667 | |
| STY2725 | phosphoribosylaminoimidazole-succinocarboxamidesynthase | RecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; | chromosome | CDS | 2562415 | 714 | - | 0.519608 | |
| STY2738 | uracil permease (uracil transporter) | SubName: Full=Uracil permease; SubName: Full=Uracil permease (Uracil transporter); | chromosome | CDS | 2574372 | 1290 | - | 0.55969 | |
| STY2739 | uracil phosphoribosyltransferase | RecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; | chromosome | CDS | 2575749 | 627 | - | 0.53748 | |
| STY2740 | phosphoribosylformylglycinamidine cyclo-ligase | RecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; | chromosome | CDS | 2576788 | 1038 | + | 0.552987 | |
| STY2741 | phosphoribosylglycinamidine myltransferase | SubName: Full=Phosphoribosylglycinamidine myltransferase; EC=2.1.2.2; | chromosome | CDS | 2577825 | 639 | + | 0.56338 | |
| STY2743 | exopolyphosphatase | RecName: Full=Exopolyphosphatase; Short=ExopolyPase; EC=3.6.1.11; AltName: Full=Metaphosphatase; | chromosome | CDS | 2580723 | 1542 | + | 0.538911 | |
| STY2751 | GMP synthase (glutamine-hydrolyzing) | RecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; | chromosome | CDS | 2587671 | 1578 | - | 0.562738 | |
| STY2771 | nucleoside diphosphate kinase (ndk) | RecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; | chromosome | CDS | 2624292 | 432 | - | 0.553241 | |
| STY2812 | phosphoribosylformylglycineamide synthetase | RecName: Full=Phosphoribosylformylglycinamidine synthase; Short=FGAM synthase; Short=FGAMS; EC=6.3.5.3; AltName: Full=Formylglycinamide ribotide amidotransferase; Short=FGARAT; AltName: Full=Formylglycinamide ribotide synthetase; | chromosome | CDS | 2672341 | 3888 | - | 0.588992 | |
| STY2814 | conserved hypothetical protein | RecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; | chromosome | CDS | 2678079 | 552 | - | 0.565217 | |
| STY2932 | ribonucleoside-diphosphate reductase 2 alpha chain | RecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; | chromosome | CDS | 2805378 | 2145 | + | 0.537995 | |
| STY2933 | ribonucleoside-diphosphate reductase 2 beta chain | RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; EC=1.17.4.1; | chromosome | CDS | 2807533 | 960 | + | 0.496875 | |
| STY3082 | CTP synthetase | RecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; | chromosome | CDS | 2945697 | 1638 | - | 0.52442 | |
| STY3142 | thymidylate synthetase | RecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; | chromosome | CDS | 3014265 | 795 | - | 0.518239 | |
| STY3256 | conserved hypothetical protein | RecName: Full=dITP/XTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-canonical purine NTP pyrophosphatase; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; | chromosome | CDS | 3118212 | 594 | + | 0.545455 | |
| STY3341 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3183611 | 456 | + | 0.484649 | |
| STY3513 | cytosine permease | SubName: Full=Cytosine permease; | chromosome | CDS | 3356360 | 1254 | + | 0.555821 | |
| STY3514 | cytosine deaminase | SubName: Full=Cytosine deaminase; | chromosome | CDS | 3357600 | 1281 | + | 0.552693 | |
| STY3620 | adenylate cyclase | RecName: Full=Adenylate cyclase; EC=4.6.1.1; AltName: Full=ATP pyrophosphate-lyase; AltName: Full=Adenylyl cyclase; | chromosome | CDS | 3472059 | 2547 | - | 0.543777 | |
| STY3641 | guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (guanosine pentaphosphatase) | RecName: Full=Guanosine-5-triphosphate,3-diphosphate pyrophosphatase; EC=3.6.1.40; AltName: Full=Guanosine pentaphosphate phosphohydrolase; AltName: Full=pppGpp-5-phosphohydrolase; | chromosome | CDS | 3498321 | 1482 | + | 0.555331 | |
| STY3644 | probable uridine phosphorylase | SubName: Full=Probable uridine phosphorylase; | chromosome | CDS | 3502694 | 744 | - | 0.580645 | |
| STY3709 | phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase (bifunctional enzyme) | RecName: Full=Bifunctional purine biosynthesis protein PurH; Includes: RecName: Full=Phosphoribosylaminoimidazolecarboxamide formyltransferase; EC=2.1.2.3; AltName: Full=AICAR transformylase; Includes: RecName: Full=IMP cyclohydrolase; EC=3.5.4.10; AltName: Full=ATIC; AltName: Full=IMP synthase; AltName: Full=Inosinicase; | chromosome | CDS | 3558479 | 1590 | + | 0.566667 | |
| STY3710 | phosphoribosylglycineamide synthetase | RecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; | chromosome | CDS | 3560084 | 1290 | + | 0.607752 | |
| STY3765 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3628564 | 1557 | - | 0.519589 | |
| STY4046 | putative purine permease | SubName: Full=Putative purine permease; | chromosome | CDS | 3906477 | 1392 | - | 0.572557 | |
| STY4052 | 5'guanylate kinase | RecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; | chromosome | CDS | 3914577 | 624 | - | 0.496795 | |
| STY4061 | orotate phosphoribosyltransferase | RecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; | chromosome | CDS | 3921697 | 642 | + | 0.538941 | |
| STY4063 | deoxyuridine 5'-triphosphate nucleotidohydrolase | RecName: Full=Deoxyuridine 5-triphosphate nucleotidohydrolase; Short=dUTPase; EC=3.6.1.23; AltName: Full=dUTP pyrophosphatase; | chromosome | CDS | 3923120 | 456 | - | 0.554825 | |
| STY4675 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4537926 | 327 | - | 0.559633 | |
| allB | putative allantoinase | RecName: Full=Allantoinase; EC=3.5.2.5; AltName: Full=Allantoin-utilizing enzyme; | chromosome | CDS | 577181 | 1362 | + | 0.516153 | |
| cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | SubName: Full=2,3-cyclic-nucleotide 2-phosphodiesterase; EC=3.1.4.16; | chromosome | CDS | 4617932 | 1944 | - | 0.518519 | |
| deoA | thymidine phosphorylase | RecName: Full=Thymidine phosphorylase; EC=2.4.2.4; AltName: Full=TdRPase; | chromosome | CDS | 4778898 | 1323 | + | 0.557823 | |
| deoC | deoxyribose-phosphate aldolase | RecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase; | chromosome | CDS | 4777978 | 798 | + | 0.54386 | |
| deoD | purine nucleoside phosphorylase | RecName: Full=Purine nucleoside phosphorylase DeoD-type; Short=PNP; EC=2.4.2.1; | chromosome | CDS | 4781705 | 720 | + | 0.552778 | |
| htdA | transfer repressor | SubName: Full=HtdA; SubName: Full=Putative transfer repressor; SubName: Full=Transfer repressor; | pHCM1 | CDS | 64566 | 453 | + | 0.445916 | |
| miaE | tRNA hydroxylase | SubName: Full=tRNA hydroxylase; | chromosome | CDS | 4669470 | 765 | + | 0.550327 | |
| mtn | MTA/SAH nucleosidase | RecName: Full=5-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Short=MTA/SAH nucleosidase; Short=MTAN; EC=3.2.2.9; AltName: Full=5-methylthioadenosine nucleosidase; Short=MTA nucleosidase; AltName: Full=S-adenosylhomocysteine nucleosidase; Short=AdoHcy nucleosidase; Short=SAH nucleosidase; Short=SRH nucleosidase; | chromosome | CDS | 239070 | 699 | - | 0.570815 | |
| nrdD | anaerobic ribonucleoside-triphosphate reductase | SubName: Full=Anaerobic ribonucleoside-triphosphate reductase; EC=1.17.4.2; | chromosome | CDS | 4648630 | 2139 | - | 0.551192 | |
| nrdI | NrdI protein | RecName: Full=Protein NrdI; | chromosome | CDS | 2804995 | 411 | + | 0.574209 | |
| purA | adenylosuccinate synthetase | RecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; | chromosome | CDS | 4585444 | 1299 | + | 0.540416 | |
| pyrB | aspartate carbamoyltransferase catalytic subunit | RecName: Full=Aspartate carbamoyltransferase catalytic chain; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; | chromosome | CDS | 4660048 | 936 | - | 0.549145 | |
| pyrI | aspartate carbamoyltransferase regulatory subunit | RecName: Full=Aspartate carbamoyltransferase regulatory chain; | chromosome | CDS | 4659574 | 462 | - | 0.497835 | |
| udp | uridine phosphorylase | RecName: Full=Uridine phosphorylase; Short=UPase; Short=UrdPase; EC=2.4.2.3; | chromosome | CDS | 3443878 | 762 | - | 0.559055 | |
| ybeK | probable nucleoside hydrolase | RecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA; EC=3.2.-.-; AltName: Full=Cytidine/uridine-specific hydrolase; | chromosome | CDS | 702239 | 936 | - | 0.573718 | |
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