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2024-05-18 20:10:47

Gene list

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COG category: Amino acid transport and metabolism
Genomic element: chromosome

Number of genes found: 225

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Geobacter sulfurreducens PCA, PCA
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA GSU0574 membrane protein, putativechromosome CDS602546 927 + 0.702265
NA GSU1239 glutamate synthase-related proteinchromosome CDS1341008 1530 - 0.634641
NA GSU2491 major facilitator family transporterchromosome CDS2737208 1263 + 0.670626
NA GSU2011 cysteine desulfurasechromosome CDS2203783 1176 - 0.604592
NA GSU0119 glyoxalase family proteinchromosome CDS133877 339 - 0.60767
NA GSU2944 (R)-2-hydroxyglutaryl-CoA dehydratase alpha-subunit, putativechromosome CDS3241463 1296 + 0.616512
NA GSU1236 conserved hypothetical proteinchromosome CDS1338075 1020 - 0.607843
NA GSU1707 group II decarboxylasechromosome CDS1870600 1659 + 0.594937
NA GSU1734 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putativechromosome CDS1899003 1143 - 0.59755
NA GSU0117 aminotransferase, classes I and IIchromosome CDS131671 1305 - 0.574713
NA GSU3303 methylmalonyl-CoA epimerasechromosome CDS3626626 405 + 0.562963
NA GSU3392 branched-chain amino acid ABC transporter, ATP-binding proteinchromosome CDS3729621 771 - 0.629053
NA GSU0042 hypothetical proteinchromosome CDS51755 249 + 0.650602
NA GSU0939 nitrogen regulatory protein P-II, putativechromosome CDS1009395 339 + 0.566372
NA GSU1828 chorismate mutase domain proteinchromosome CDS1996181 312 + 0.570513
NA GSU2007 branched-chain amino acid ABC transporter, permease proteinchromosome CDS2200668 1074 + 0.588454
NA GSU3401 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putativechromosome CDS3743342 1191 - 0.611251
NA GSU0768 AzlC family proteinchromosome CDS823876 705 + 0.696454
NA GSU2677 membrane protein, putativechromosome CDS2956339 909 - 0.689769
NA GSU2649 amino acid ABC transporter, amino acid-binding proteinchromosome CDS2919433 810 + 0.608642
NA GSU1579 LAO/AO transport system ATPasechromosome CDS1730261 960 + 0.628125
NA GSU1152 conserved hypothetical proteinchromosome CDS1244688 381 + 0.577428
NA GSU1868 aminotransferase, class Vchromosome CDS2044085 1143 - 0.647419
NA GSU1697 membrane protein, putativechromosome CDS1856595 1935 + 0.608786
NA GSU0018 transcriptional regulator, GntR family/aminotransferase class-Ichromosome CDS28904 1437 - 0.656228
NA GSU1732 branched-chain amino acid ABC transporter, permease proteinchromosome CDS1897031 981 - 0.585117
NA GSU1061 aspartate aminotransferasechromosome CDS1147172 1197 - 0.637427
NA GSU2623 peptide ABC transporter, ATP-binding proteinchromosome CDS2895130 963 + 0.66459
NA GSU1028 peptidylarginine deiminase-related proteinchromosome CDS1106605 1035 - 0.670531
NA GSU2925 conserved hypothetical proteinchromosome CDS3224422 975 + 0.625641
NA GSU2951 ABC transporter, ATP-binding proteinchromosome CDS3250442 1308 + 0.667431
NA GSU3315 major facilitator family transporterchromosome CDS3640042 1245 - 0.645783
NA GSU0162 aromatic aminotransferase, putativechromosome CDS179342 1233 + 0.627737
NA GSU3140 peptidase, M1 family proteinchromosome CDS3446890 2073 - 0.664255
NA GSU2462 homoserine O-acetyltransferasechromosome CDS2700316 1107 + 0.657633
NA GSU1429 membrane protein, putativechromosome CDS1564814 2733 - 0.58873
NA GSU2878 aspartate-semialdehyde dehydrogenase, putativechromosome CDS3153358 1104 - 0.63587
NA GSU1433 peptide ABC transporter, periplasmic peptide-binding proteinchromosome CDS1571369 1617 + 0.621521
NA GSU0084 aminotransferase, classes I and IIchromosome CDS95499 1176 + 0.67432
NA GSU3260 phosphoserine aminotransferase, putativechromosome CDS3575462 1074 + 0.621043
NA GSU3243 hypothetical proteinchromosome CDS3556304 372 - 0.645161
NA GSU1183 O-acetyl-L-homoserine sulfhydrylasechromosome CDS1290337 1287 + 0.606061
NA GSU2974 methylenetetrahydrofolate reductase family proteinchromosome CDS3265450 1818 - 0.663916
NA GSU0860 methylenetetrahydrofolate reductase family proteinchromosome CDS919385 906 - 0.662252
NA GSU0800 amino acid ABC transporter, periplasmic amino acid-binding proteinchromosome CDS857663 792 - 0.60101
NA GSU1564 Glu/Leu/Phe/Val dehydrogenase family proteinchromosome CDS1717831 2061 + 0.635129
NA GSU1323 conserved hypothetical proteinchromosome CDS1448729 444 + 0.644144
NA GSU0378 glycine cleavage system P protein, subunit 2chromosome CDS412325 1446 + 0.64177
NA GSU0790 hypothetical proteinchromosome CDS849136 921 - 0.647123
NA GSU3407 membrane protein, putativechromosome CDS3748930 879 + 0.620023
NA GSU1327 homocysteine S-methyltransferase domain proteinchromosome CDS1452599 957 + 0.705329
NA GSU2651 amino acid ABC transporter, ATP-binding proteinchromosome CDS2921027 732 + 0.665301
NA GSU3162 L-allo-threonine aldolasechromosome CDS3468247 1047 + 0.678128
NA GSU2415 lipase/acylhydrolase, putativechromosome CDS2649504 660 + 0.678788
NA GSU1829 hypothetical proteinchromosome CDS1996477 210 + 0.547619
NA GSU2676 membrane protein, putativechromosome CDS2955391 900 - 0.697778
NA GSU0511 conserved domain proteinchromosome CDS544177 1431 + 0.584207
NA GSU3388 membrane protein, putativechromosome CDS3726258 966 + 0.635611
NA GSU3404 amino acid ABC transporter, ATP-binding proteinchromosome CDS3746456 723 - 0.603043
NA GSU2650 amino acid ABC transporter, permease protein, putativechromosome CDS2920249 789 + 0.638783
NA GSU2006 branched-chain amino acid ABC transporter, permease proteinchromosome CDS2199786 867 + 0.581315
NA GSU2570 cysteine desulfurasechromosome CDS2832260 1185 - 0.680169
NA GSU1305 Glu/Leu/Phe/Val dehydrogenase family proteinchromosome CDS1430144 1353 - 0.616408
NA GSU0568 hypothetical proteinchromosome CDS597932 402 + 0.669154
NA GSU2755 periplasmic substrate-binding protein/sensor histidine kinasechromosome CDS3029367 1773 - 0.679075
NA GSU1770 hypothetical proteinchromosome CDS1933128 1359 - 0.580574
NA GSU1799 aspartate kinase, monofunctional classchromosome CDS1965367 1218 - 0.530378
NA GSU0799 amino acid ABC transporter, permease proteinchromosome CDS856504 801 - 0.619226
NA GSU1902 3-isopropylmalate dehydratase, small subunit, putativechromosome CDS2080212 528 - 0.560606
NA GSU0545 membrane protein, putativechromosome CDS577781 927 + 0.667745
NA GSU1194 transporter, LysE familychromosome CDS1298743 621 + 0.639291
NA GSU3094 phosphoribosyl-ATP pyrophosphohydrolasechromosome CDS3399456 327 - 0.550459
NA GSU3361 transglutaminase domain proteinchromosome CDS3692660 1548 - 0.643411
NA GSU3333 phospho-2-dehydro-3-deoxyheptonate aldolasechromosome CDS3662036 942 - 0.649682
NA GSU2425 O-acetyl-L-homoserine sulfhydrylasechromosome CDS2657210 1284 + 0.654984
NA GSU1435 peptide ABC transporter, permease proteinchromosome CDS1573971 849 + 0.630153
NA GSU0918 S-adenosylmethionine synthetase family proteinchromosome CDS983875 1203 - 0.660017
NA GSU2786 cysteine desulfurasechromosome CDS3064891 1137 - 0.703606
NA GSU1960 hexapeptide transferase family proteinchromosome CDS2149295 588 - 0.595238
NA GSU3142 phospho-2-dehydro-3-deoxyheptonate aldolasechromosome CDS3449646 1020 - 0.623529
NA GSU3457 glycine cleavage system transcriptional repressor, putativechromosome CDS3803900 558 - 0.602151
NA GSU1176 fumarate reductase, cytochrome b subunit, putativechromosome CDS1281852 663 + 0.552036
NA GSU3405 amino acid ABC transporter, permease proteinchromosome CDS3747189 792 - 0.589646
NA GSU1006 hypothetical proteinchromosome CDS1086563 249 + 0.62249
NA GSU2387 B12-binding domainchromosome CDS2616355 681 - 0.671072
NA GSU1716 phosphoadenosine phosphosulfate reductase, putativechromosome CDS1880436 708 + 0.624294
NA GSU2546 hypothetical proteinchromosome CDS2808175 282 - 0.546099
NA GSU2490 oxalate/formate antiporter, putativechromosome CDS2735710 1368 + 0.662281
NA GSU3394 branched-chain amino acid ABC transporter, permease proteinchromosome CDS3731341 876 - 0.616438
NA GSU2291 phospho-2-dehydro-3-deoxyheptonate aldolasechromosome CDS2509036 1068 + 0.598315
NA GSU2009 branched-chain amino acid ABC transporter, ATP-binding proteinchromosome CDS2202499 705 + 0.588652
NA GSU0752 transporter, putativechromosome CDS796200 1341 - 0.666667
NA GSU1735 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putativechromosome CDS1900164 1137 - 0.566403
NA GSU1903 3-isopropylmalate dehydratase, large subunit, putativechromosome CDS2080770 1284 - 0.591121
NA GSU2624 peptide ABC transporter, ATP-binding proteinchromosome CDS2896089 996 + 0.62249
NA GSU3406 amino acid ABC transporter, periplasmic amino acid-binding proteinchromosome CDS3747981 756 - 0.585979
NA GSU0798 amino acid ABC transporter, ATP-binding proteinchromosome CDS855744 774 - 0.630491
NA GSU3408 L-threonine aldolase, low-specificitychromosome CDS3749852 1056 + 0.613636
NA GSU1434 peptide ABC transporter, permease proteinchromosome CDS1572987 981 + 0.610601
NA GSU1025 conserved domain proteinchromosome CDS1104518 603 - 0.587065
NA GSU2005 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putativechromosome CDS2198517 1158 + 0.601036
NA GSU2444 sensor histidine kinasechromosome CDS2678697 1833 - 0.638843
NA GSU2084 hydrolase, HAD-superfamilychromosome CDS2290096 576 - 0.635417
NA GSU0377 glycine cleavage system P protein, subunit 1chromosome CDS410988 1347 + 0.675575
NA GSU3391 branched-chain amino acid ABC transporter, ATP-binding proteinchromosome CDS3728872 705 - 0.6
NA GSU1397 cytochrome c family protein, putativechromosome CDS1535639 1704 - 0.634977
NA GSU0188 conserved domain proteinchromosome CDS201297 345 - 0.602899
NA GSU0264 drug resistance transporter, Bcr/CflA familychromosome CDS270803 1236 - 0.675566
NA GSU3393 branched-chain amino acid ABC transporter, permease proteinchromosome CDS3730410 924 - 0.600649
NA GSU0250 conserved hypothetical proteinchromosome CDS257966 441 + 0.609977
NA GSU0967 membrane protein, putativechromosome CDS1040661 1053 + 0.610636
NA GSU2502 spermine/spermidine synthase family proteinchromosome CDS2754063 3054 - 0.669941
NA GSU2989 L-threonine-O-3-phosphate decarboxylase, putativechromosome CDS3280633 1086 - 0.694291
NA GSU2780 hypothetical proteinchromosome CDS3058694 507 - 0.591716
NA GSU1545 transporter, LysE familychromosome CDS1697747 615 + 0.622764
NA GSU1257 ABC transporter, periplasmic-substrate binding protein, putativechromosome CDS1369743 1626 + 0.627306
NA GSU0773 multidrug resistance protein, putativechromosome CDS829120 1200 + 0.686667
NA GSU1480 drug resistance transporter, EmrB/QacA familychromosome CDS1619796 1554 - 0.599743
NA GSU2921 5-methyltetrahydrofolate-homocysteine methyltransferase, truncationchromosome CDS3219940 2415 - 0.663768
NA GSU2607 prephenate dehydrogenasechromosome CDS2874994 873 - 0.688431
NA GSU1528 ABC transporter, periplasmic substrate-binding proteinchromosome CDS1674735 897 + 0.58194
NA GSU1242 aspartate aminotransferasechromosome CDS1344212 1200 - 0.6025
NA GSU0185 membrane protein, putativechromosome CDS198989 1221 - 0.656839
NA GSU1082 conserved hypothetical proteinchromosome CDS1168532 213 + 0.56338
NA GSU0706 major facilitator family transporterchromosome CDS753762 1287 - 0.684538
NA GSU1473 membrane protein, putativechromosome CDS1615103 738 + 0.51897
NA GSU2134 nitrogen regulatory protein P-II, putativechromosome CDS2349833 342 - 0.479532
NA GSU0831 nitrogen regulatory protein P-II, putativechromosome CDS893375 342 + 0.535088
NA GSU2526 membrane protein, putativechromosome CDS2783754 735 - 0.571429
NA GSU3450 glutamate synthase-related proteinchromosome CDS3794113 4533 - 0.661152
NA GSU2389 ABC transporter, periplasmic substrate-binding protein, putativechromosome CDS2619301 1149 - 0.653612
NA GSU2061 acetyltransferase, GNAT familychromosome CDS2261110 450 - 0.584444
NA GSU1235 conserved hypothetical proteinchromosome CDS1337263 747 - 0.606426
NA GSU1747 hypothetical proteinchromosome CDS1911684 507 + 0.550296
NA GSU1798 2-isopropylmalate synthase/homocitrate synthase family proteinchromosome CDS1963664 1587 - 0.546314
NA GSU2519 (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit, putativechromosome CDS2777649 1164 - 0.628866
NA GSU3390 membrane protein, putativechromosome CDS3727955 909 - 0.620462
NA GSU2008 branched-chain amino acid ABC transporter, ATP-binding proteinchromosome CDS2201752 720 + 0.604167
NA GSU2744 major facilitator family transporterchromosome CDS3019720 1182 - 0.684433
NA GSU1836 nitrogen regulatory protein P-IIchromosome CDS2002270 339 - 0.539823
NA GSU1549 lipoprotein, putativechromosome CDS1701521 609 + 0.663383
LYS1 GSU2539 saccharopine dehydrogenasechromosome CDS2802886 1197 - 0.627402
ald GSU2292 alanine dehydrogenasechromosome CDS2510112 1098 - 0.651184
arcC GSU2487 carbamate kinasechromosome CDS2731633 945 - 0.706878
argB GSU0150 acetylglutamate kinasechromosome CDS167708 879 + 0.634812
argC GSU2874 N-acetyl-gamma-glutamyl-phosphate reductasechromosome CDS3150441 1041 - 0.632085
argD GSU0151 acetylornithine aminotransferasechromosome CDS168667 1200 + 0.643333
argF GSU0152 ornithine carbamoyltransferasechromosome CDS169863 912 + 0.640351
argG GSU0153 argininosuccinate synthasechromosome CDS170807 1221 + 0.628174
argH GSU0156 argininosuccinate lyasechromosome CDS173833 1377 + 0.636166
argJ GSU2049 glutamate N-acetyltransferase/amino-acid acetyltransferasechromosome CDS2248053 1182 - 0.630288
aroA GSU2606 3-phosphoshikimate 1-carboxyvinyltransferasechromosome CDS2873688 1290 - 0.697674
aroB GSU2025 3-dehydroquinate synthasechromosome CDS2217113 1089 - 0.607897
aroC GSU2027 chorismate synthasechromosome CDS2218709 1182 - 0.612521
aroE GSU1490 shikimate 5-dehydrogenasechromosome CDS1633917 861 + 0.614402
aroK GSU2026 shikimate kinasechromosome CDS2218198 528 - 0.607955
aroQ GSU2022 3-dehydroquinate dehydratase, type IIchromosome CDS2215167 453 - 0.589404
asnB GSU1953 asparagine synthase, glutamine-hydrolyzingchromosome CDS2140879 1836 - 0.505991
aspA GSU0479 aspartate ammonia-lyasechromosome CDS510727 1392 + 0.665948
carA GSU1273 carbamoyl-phosphate synthase, small subunitchromosome CDS1387991 1125 + 0.625778
carB GSU1276 carbamoyl-phosphate synthase, large subunitchromosome CDS1390449 3246 + 0.616143
cysD GSU1717 sulfate adenylyltransferase, subunit 2chromosome CDS1881178 804 + 0.613184
cysE GSU2572 serine acetyltransferasechromosome CDS2833882 678 - 0.646018
cysK GSU0535 cysteine synthase Achromosome CDS567299 924 + 0.650433
cysM GSU3158 cysteine synthase Bchromosome CDS3465190 927 - 0.660194
dapA GSU0159 dihydrodipicolinate synthasechromosome CDS177446 873 + 0.636884
dapB GSU0160 dihydrodipicolinate reductasechromosome CDS178340 801 + 0.654182
dapF GSU0531 diaminopimelate epimerasechromosome CDS564955 849 - 0.624264
gcvH-1 GSU0376 glycine cleavage system H proteinchromosome CDS410614 375 + 0.608
gcvH-2 GSU2018 glycine cleavage system H proteinchromosome CDS2211797 399 - 0.566416
gcvT GSU0375 glycine cleavage system T proteinchromosome CDS409470 1089 + 0.653811
glnA GSU1835 glutamine synthetase, type Ichromosome CDS2000819 1413 - 0.592357
gltA GSU3057 glutamate synthase (NADPH), homotetramericchromosome CDS3360147 1413 - 0.660297
glyA GSU1607 serine hydroxymethyltransferasechromosome CDS1757872 1248 + 0.580128
hisA GSU3096 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerasechromosome CDS3400542 735 - 0.644898
hisB GSU3098 imidazoleglycerol-phosphate dehydratasechromosome CDS3401904 588 - 0.596939
hisC GSU3099 histidinol-phosphate aminotransferasechromosome CDS3402517 1053 - 0.624881
hisD GSU3100 histidinol dehydrogenasechromosome CDS3403592 1290 - 0.651938
hisF GSU3095 imidazoleglycerol phosphate synthase, cyclase subunitchromosome CDS3399779 762 - 0.649606
hisG-1 GSU1530 ATP phosphoribosyltransferasechromosome CDS1678319 876 - 0.626712
hisG-2 GSU3101 ATP phosphoribosyltransferasechromosome CDS3404878 639 - 0.593114
hisH GSU3097 imidazole glycerol phosphate synthase, glutamine amidotransferase subunitchromosome CDS3401273 630 - 0.611111
hisI GSU1531 phosphoribosyl-AMP cyclohydrolasechromosome CDS1679191 378 - 0.592593
hom GSU1693 homoserine dehydrogenasechromosome CDS1851187 1311 + 0.58505
ilvA GSU0486 threonine dehydratasechromosome CDS516396 1209 - 0.622002
ilvB GSU1911 acetolactate synthase, large subunit, biosynthetic typechromosome CDS2089050 1701 - 0.586126
ilvC GSU1909 ketol-acid reductoisomerasechromosome CDS2087411 1017 - 0.59587
ilvD GSU1912 dihydroxy-acid dehydratasechromosome CDS2090783 1662 - 0.615523
ilvE GSU0656 branched-chain amino acid aminotransferasechromosome CDS691898 1074 + 0.577281
ilvN GSU1910 acetolactate synthase, small subunitchromosome CDS2088488 492 - 0.579268
kamA GSU1754 L-lysine 2,3-aminomutasechromosome CDS1916898 1062 - 0.621469
leuA GSU1906 2-isopropylmalate synthasechromosome CDS2083813 1539 - 0.540611
leuB GSU2879 3-isopropylmalate dehydrogenasechromosome CDS3154503 1089 - 0.645546
livF GSU1730 branched-chain amino acid ABC transporter, ATP-binding proteinchromosome CDS1895526 744 - 0.569892
livG GSU1731 branched-chain amino acid ABC transporter, ATP-binding proteinchromosome CDS1896286 753 - 0.605578
livH GSU1733 branched-chain amino acid ABC transporter, permease proteinchromosome CDS1898032 885 - 0.567232
lysA GSU0158 diaminopimelate decarboxylasechromosome CDS176159 1254 + 0.637161
metC-1 GSU0944 cystathionine beta-lyasechromosome CDS1014277 1134 + 0.653439
metC-2 GSU0945 cystathionine beta-lyasechromosome CDS1015426 1137 + 0.657872
nifV GSU0937 homocitrate synthasechromosome CDS1007092 1152 + 0.643229
nspC GSU2538 carboxynorspermidine decarboxylasechromosome CDS2801539 1203 - 0.628429
pabB GSU0523 para-aminobenzoate synthase, component Ichromosome CDS557100 1791 - 0.676717
pepA GSU0332 aminopeptidase A/Ichromosome CDS362976 1491 + 0.598256
pepF GSU1873 oligoendopeptidase Fchromosome CDS2050853 1791 + 0.615299
pepN GSU0304 aminopeptidase Nchromosome CDS334411 2634 - 0.629461
pepQ-1 GSU1105 xaa-pro dipeptidasechromosome CDS1190621 1194 + 0.579565
pepQ-2 GSU2021 xaa-pro dipeptidasechromosome CDS2214096 1068 - 0.60206
pheA GSU2608 chorismate mutase/prephenate dehydratasechromosome CDS2875863 1077 - 0.632312
proA GSU3211 gamma-glutamyl phosphate reductasechromosome CDS3516342 1257 - 0.62848
proB GSU3212 glutamate 5-kinasechromosome CDS3517870 1122 - 0.657754
proC GSU2541 pyrroline-5-carboxylate reductasechromosome CDS2804942 813 + 0.685117
prsA GSU0661 ribose-phosphate pyrophosphokinasechromosome CDS698000 945 + 0.591534
selA GSU3369 L-seryl-tRNA selenium transferasechromosome CDS3702160 1389 - 0.661627
selD GSU0607 selenide, water dikinase, selenocysteine-containingchromosome CDS642216 1038 + 0.691715
serA GSU1198 D-3-phosphoglycerate dehydrogenasechromosome CDS1301218 1629 + 0.61326
sfrB GSU0510 Fe(III) reductase, beta subunitchromosome CDS542195 2019 - 0.606241
speA GSU2537 biosynthetic arginine decarboxylasechromosome CDS2799433 1908 - 0.593816
thrC GSU1695 threonine synthasechromosome CDS1853254 1386 - 0.603175
trpA GSU2371 tryptophan synthase, alpha subunitchromosome CDS2598080 795 - 0.656604
trpB GSU2375 tryptophan synthase, beta subunitchromosome CDS2602792 1191 - 0.65827
trpC GSU2380 Indole-3-glycerol phosphate synthasechromosome CDS2608851 801 - 0.666667
trpD GSU2381 anthranilate phosphoribosyltransferasechromosome CDS2609656 1053 - 0.674264
trpE GSU2383 anthranilate synthase component Ichromosome CDS2611347 1476 - 0.669377
trpF GSU2378 N-(5'phosphoribosyl)anthranilate isomerasechromosome CDS2606832 612 - 0.686275
trpG GSU2382 anthranilate synthase component IIchromosome CDS2610773 573 - 0.638743