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2024-05-18 06:07:04

Gene list

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COG category: Amino acid transport and metabolism
Genomic element: chromosome II

Number of genes found: 58

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudoalteromonas haloplanktis TAC125, TAC125
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PSHAb0190 conserved protein of unknown functionchromosome II CDS228130 624 + 0.371795
NA PSHAb0428 putative acetylornithine transaminasechromosome II CDS487681 1206 - 0.42869
NA PSHAb0239 putative orphan proteinchromosome II CDS284490 219 + 0.452055
NA PSHAb0317 putative manganese binding agmatinase (SpeB)chromosome II CDS367765 1110 + 0.434234
NA PSHAb0390 putative dihydrodipicolinate synthase (dapA-like)chromosome II CDS450141 918 + 0.422658
NA PSHAb0401 Histidine ammonia-lyase (hutT-like)chromosome II CDS457180 1545 + 0.43754
NA PSHAb0238 conserved protein of unknown functionchromosome II CDS281958 2469 + 0.432159
NA PSHAb0129 putative dihydroxyacid dehydratase (ilvD-like)chromosome II CDS159570 1680 + 0.435714
NA PSHAb0246 putative orphan proteinchromosome II CDS290503 183 + 0.344262
NA PSHAb0029 putative enzyme proteinchromosome II CDS35740 501 + 0.397206
NA PSHAb0042 putative membrane proteinchromosome II CDS49385 354 + 0.358757
NA PSHAb0465 probable isopropylmalate dehydrogenasechromosome II CDS523204 1008 - 0.418651
NA PSHAb0214 putative transport proteinchromosome II CDS251834 876 + 0.389269
NA PSHAb0240 putative efflux proteinchromosome II CDS285152 618 + 0.435275
NA PSHAb0005 Dipeptidyl-peptidase IVchromosome II CDS8452 2334 + 0.421165
NA PSHAb0171 putative hydrolasechromosome II CDS211643 1314 - 0.425419
NA PSHAb0302 putative aminopeptidasechromosome II CDS353174 1362 + 0.435389
NA PSHAb0427 putative arginine succinyltransferasechromosome II CDS486597 1035 - 0.427053
NA PSHAb0097 putative enzyme proteinchromosome II CDS115021 1668 - 0.394484
NA PSHAb0063 putative peptidasechromosome II CDS73931 2019 - 0.423972
NA PSHAb0479 putative idonate or gluconate permeasechromosome II CDS540778 1344 - 0.425595
NA PSHAb0477 putative cystathionine gamma-synthase or beta-lyase, PLP-dependentchromosome II CDS538083 1272 + 0.430818
NA PSHAb0057 putative Zn-dependent aminopeptidasechromosome II CDS63742 2451 + 0.414117
NA PSHAb0183 putative transporterchromosome II CDS221736 1227 + 0.405868
NA PSHAb0051 putative amino acid efflux proteinchromosome II CDS56000 645 - 0.384496
NA PSHAb0033 putative membrane proteinchromosome II CDS38578 621 + 0.407407
NA PSHAb0023 putative membrane proteinchromosome II CDS29277 1518 - 0.453228
NA PSHAb0543 putative ornithine cyclodeaminasechromosome II CDS607365 1071 + 0.434174
NA PSHAb0215 putative metal-dependent dipeptidasechromosome II CDS252792 1221 - 0.428337
NA PSHAb0235 putative enzymechromosome II CDS276521 2049 - 0.41386
NA PSHAb0360 putative permeasechromosome II CDS419366 282 + 0.312057
NA PSHAb0303 putative S-C lyasechromosome II CDS354560 387 - 0.390181
NA PSHAb0160 conserved protein of unknown function ; putative integral inner membrane sodium-dependent carbohydrate transporter proteinchromosome II CDS197519 2604 - 0.43126
NA PSHAb0034 putative spermine/spermidine synthase proteinchromosome II CDS39191 909 + 0.360836
NA PSHAb0151 putative sodium-dependent carbohydrate permeasechromosome II CDS185547 2439 - 0.374334
NA PSHAb0115 putative enzyme proteinchromosome II CDS140003 384 - 0.455729
aroH PSHAb0559 Phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphatechromosome II CDS630071 1356 - 0.433628
asd PSHAb0528 putative aspartate-semialdehyde dehydrogenasechromosome II CDS597051 1116 + 0.446237
astB PSHAb0177 putative succinylarginine dihydrolasechromosome II CDS217306 1347 - 0.434298
betA PSHAb0418 putative choline dehydrogenase (flavoprotein)chromosome II CDS477680 1668 - 0.434053
betC PSHAb0261 putative choline dehydrogenasechromosome II CDS307281 1602 + 0.425718
gltB PSHAb0127 glutamate synthase, large subunit, GOGATchromosome II CDS153304 4608 + 0.446398
gltD PSHAb0128 glutamate synthase, small subunit, nucleotide-binding, 4Fe-4S protein, GOGATchromosome II CDS157932 1491 + 0.463447
hisA PSHAb0489 N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'- phosphoribosyl)-4-imidazolecarboxamide isomerasechromosome II CDS553374 729 - 0.438957
hisB PSHAb0491 modular bifunctional: histidinol-phosphatase (N-terminal); imidazoleglycerol-phosphate dehydratase (C-terminal)chromosome II CDS554723 1062 - 0.42467
hisC PSHAb0492 histidinol phosphate aminotransferasechromosome II CDS555781 1110 - 0.422523
hisD PSHAb0493 bifunctional HisD: L-histidinal:NAD+ dehydrogenase ; L-histidinol:NAD+ dehydrogenasechromosome II CDS556880 1302 - 0.447005
hisF PSHAb0483 imidazole glycerol phosphate synthase, subunit with HisH; may channel ammoniumchromosome II CDS544408 774 - 0.416021
hisG PSHAb0494 ATP phosphoribosyltransferasechromosome II CDS558187 900 - 0.43
hisH PSHAb0490 Imidazole glycerol phosphate synthase subunit hisH (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunichromosome II CDS554136 549 - 0.471767
hisI PSHAb0482 bifunctional: phosphoribosyl-AMP cyclohydrolase (N-terminal); phosphoribosyl-ATP pyrophosphatase (C-terminal)chromosome II CDS543797 615 - 0.413008
ilvH PSHAb0463 acetolactate synthase isozyme III small subunitchromosome II CDS520541 501 - 0.413174
ilvI PSHAb0464 acetolactate synthase isozyme III large subunitchromosome II CDS521041 1725 - 0.428406
iscS PSHAb0099 Cysteine desulfurase (ThiI) (transpersulfidase) (NifS protein homolog)chromosome II CDS117905 1128 + 0.376773
ltaE PSHAb0295 Low-specificity L-threonine aldolase (Low-specificity L-TA)chromosome II CDS344984 1005 - 0.433831
nanA PSHAb0156 N-acetylneuraminate lyase (aldolase)chromosome II CDS190981 906 - 0.43819
smvA PSHAb0203 putative SmvA (YddG) efflux proteinchromosome II CDS239070 921 + 0.388708
yaaJ PSHAb0545 putative amino acid permeasechromosome II CDS609456 1407 + 0.427861