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2024-05-14 02:19:49

Gene list

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COG category: Amino acid transport and metabolism
Genomic element: chromosome

Number of genes found: 223

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Saccharophagus degradans 2-40, 2-40
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Sde_2971 branched-chain amino acid ABC transporter, ATP-binding proteinchromosome CDS3775218 690 - 0.446377
NA Sde_3746 peptidase-likechromosome CDS4745544 978 - 0.521472
NA Sde_2647 dehydrogenasechromosome CDS3348164 1017 - 0.496559
NA Sde_3483 conserved hypothetical proteinchromosome CDS4437018 624 - 0.448718
NA Sde_0544 putative allophanate hydrolasechromosome CDS663933 1650 - 0.50303
NA Sde_3834 sugar efflux transporterchromosome CDS4833852 1116 + 0.508961
NA Sde_1222 spermidine synthasechromosome CDS1569048 1533 - 0.439008
NA Sde_2686 Dihydropteroate synthasechromosome CDS3410678 510 - 0.490196
NA Sde_3490 drug resistance transporter, EmrB/QacA familychromosome CDS4444620 1566 - 0.476373
NA Sde_1031 putative metabolite transport protein CsbCchromosome CDS1319480 756 - 0.431217
NA Sde_0754 Indole-3-glycerol-phosphate synthasechromosome CDS973746 798 + 0.513784
NA Sde_0490 response regulator receiver domain protein (CheY-like)chromosome CDS601553 774 + 0.510336
NA Sde_2496 glyoxylase I family proteinchromosome CDS3155015 384 - 0.429688
NA Sde_0358 methyl-accepting chemotaxis sensory transducerchromosome CDS442112 1845 - 0.511111
NA Sde_1043 conserved hypothetical proteinchromosome CDS1331783 279 + 0.580645
NA Sde_2544 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)chromosome CDS3225562 1767 - 0.478778
NA Sde_1596 3-oxoacyl-(acyl-carrier-protein) reductasechromosome CDS2051202 1164 - 0.484536
NA Sde_1664 Seryl-tRNA synthetase, class IIachromosome CDS2131733 1359 + 0.50699
NA Sde_0728 membrane protein, putativechromosome CDS941175 921 + 0.453855
NA Sde_3388 D-3-phosphoglycerate dehydrogenasechromosome CDS4322422 1236 + 0.48301
NA Sde_3155 Ribonuclease E and Gchromosome CDS4031832 1770 - 0.470057
NA Sde_2026 Tetraacyldisaccharide-1-P 4'-kinasechromosome CDS2551852 2094 + 0.450812
NA Sde_2662 ATP phosphoribosyltransferase regulatory subunit, putativechromosome CDS3378060 1185 - 0.502954
NA Sde_1710 conserved hypothetical proteinchromosome CDS2185402 1113 + 0.485175
NA Sde_2952 Parallel beta-helix repeatchromosome CDS3752548 678 - 0.498525
NA Sde_2067 conserved hypothetical proteinchromosome CDS2645269 2052 - 0.445419
NA Sde_2909 ABC-type amino acid transport/signal transduction systems periplasmic component/domain-likechromosome CDS3688214 1032 - 0.445736
NA Sde_2901 Glycoside hydrolase, familychromosome CDS3679140 954 + 0.491614
NA Sde_0221 Ureasechromosome CDS280866 1707 + 0.468658
NA Sde_0760 aminopeptidase Nchromosome CDS979583 2721 - 0.484381
NA Sde_2773 membrane protein, putativechromosome CDS3505203 951 - 0.537329
NA Sde_1011 Glutamate 5-kinasechromosome CDS1292448 1122 + 0.52139
NA Sde_1417 putative aminotransferasechromosome CDS1836068 1254 + 0.478469
NA Sde_2339 hypothetical proteinchromosome CDS2963258 345 - 0.426087
NA Sde_0488 imidazole glycerol phosphate synthase, glutamine amidotransferase subunitchromosome CDS600021 678 + 0.504425
NA Sde_1190 diaminobutyrate--pyruvate aminotransferasechromosome CDS1535350 1275 + 0.436078
NA Sde_3642 Acetylglutamate kinasechromosome CDS4619235 858 + 0.541958
NA Sde_2967 response regulator receiver domain protein (CheY-like)chromosome CDS3769240 2274 - 0.474494
NA Sde_2084 GDP-mannose 4,6-dehydratasechromosome CDS2667749 1074 - 0.479516
NA Sde_2080 dTDP-glucose 4,6-dehydratasechromosome CDS2660521 621 - 0.481481
NA Sde_3644 DNA/pantothenate metabolism flavoproteinchromosome CDS4620725 1146 + 0.528796
NA Sde_0360 N-acetylglutamate synthasechromosome CDS445952 1320 - 0.500758
NA Sde_1424 Potassium efflux system proteinchromosome CDS1842827 1116 - 0.448925
NA Sde_1075 methyl-accepting chemotaxis sensory transducerchromosome CDS1376328 1218 + 0.48358
NA Sde_3503 hypothetical proteinchromosome CDS4458598 924 + 0.457792
NA Sde_2730 Dihydrodipicolinate reductasechromosome CDS3459300 807 - 0.530359
NA Sde_2539 Dihydrolipoamide acetyltransferasechromosome CDS3216567 1017 - 0.451327
NA Sde_1194 Cytochrome bd ubiquinol oxidase, subunit IIchromosome CDS1539499 1431 + 0.490566
NA Sde_0502 Glutamate--ammonia ligasechromosome CDS614299 1407 - 0.479744
NA Sde_1367 Transcription factor jumonji, jmjCchromosome CDS1768212 1098 - 0.480874
NA Sde_2523 2-isopropylmalate synthasechromosome CDS3194891 1548 - 0.483204
NA Sde_2424 hypothetical proteinchromosome CDS3068031 2262 + 0.487179
NA Sde_3976 ParB-like partition proteinchromosome CDS5007720 753 - 0.432935
NA Sde_1381 FeS assembly protein SufBchromosome CDS1785704 1830 + 0.487432
NA Sde_1303 conserved hypothetical proteinchromosome CDS1693265 1764 + 0.504535
NA Sde_0228 ABC-type branched-chain amino acid transport system permease component-likechromosome CDS288742 1299 + 0.430331
NA Sde_3394 GGDEFchromosome CDS4325861 1266 - 0.472354
NA Sde_2685 Phosphoglucosamine mutasechromosome CDS3409428 1089 - 0.470156
NA Sde_1737 Phosphoesterase, PA-phosphatase relatedchromosome CDS2211549 2673 + 0.451927
NA Sde_0903 valine-pyruvate aminotransferasechromosome CDS1165507 1266 + 0.520537
NA Sde_3099 transglutaminase-like superfamily domain proteinchromosome CDS3957034 3351 - 0.517457
NA Sde_3256 Ribose-phosphate diphosphokinasechromosome CDS4154782 942 + 0.502123
NA Sde_0752 anthranilate synthase component IIchromosome CDS972011 579 + 0.474957
NA Sde_2146 response regulator receiver domain protein (CheY-like)chromosome CDS2736228 2238 - 0.489723
NA Sde_0813 UDP-N-acetylmuramoylalanine-D-glutamate ligasechromosome CDS1059286 441 - 0.494331
NA Sde_2974 putative branched-chain amino acid transport system permease proteinchromosome CDS3777931 924 - 0.468615
NA Sde_0237 Diaminopimelate epimerasechromosome CDS296305 834 - 0.538369
NA Sde_2413 response regulator receiver domain protein (CheY-like)chromosome CDS3056606 384 - 0.445312
NA Sde_2300 Dipeptidylaminopeptidases/acylaminoacyl-peptidas es-likechromosome CDS2925549 984 + 0.444106
NA Sde_3070 hypothetical proteinchromosome CDS3922332 372 - 0.422043
NA Sde_1983 transglutaminase-like domainchromosome CDS2493181 795 - 0.462893
NA Sde_1333 Spermidine/putrescine ABC transporter ATP-binding subunitchromosome CDS1728038 1173 + 0.463768
NA Sde_2007 transcriptional regulator, XRE familychromosome CDS2527773 1062 + 0.467985
NA Sde_3097 conserved hypothetical proteinchromosome CDS3953442 879 - 0.513083
NA Sde_0879 hypothetical proteinchromosome CDS1137764 1587 - 0.504096
NA Sde_0227 putative transcriptional regulator, Fis familychromosome CDS287126 1614 + 0.45601
NA Sde_2728 carbamoyl-phosphate synthase, large subunitchromosome CDS3454391 3234 - 0.465059
NA Sde_2083 Aspartate-semialdehyde dehydrogenasechromosome CDS2666567 1107 - 0.479675
NA Sde_0226 urea/short-chain amide ABC transporter, periplasmic urea/short-chain amide-binding proteinchromosome CDS285661 1311 + 0.42868
NA Sde_1210 CTP synthasechromosome CDS1554008 1398 + 0.449213
NA Sde_1471 conserved hypothetical proteinchromosome CDS1893950 2124 - 0.507533
NA Sde_2079 Tryptophan synthasechromosome CDS2659213 1212 - 0.462871
NA Sde_2912 signal peptide predictionchromosome CDS3694520 1272 - 0.485063
NA Sde_0061 prolyl oligopeptidase family proteinchromosome CDS73913 1962 + 0.410805
NA Sde_1730 1-aminocyclopropane-1-carboxylate deaminasechromosome CDS2204972 978 + 0.496933
NA Sde_2634 Host factor Hfqchromosome CDS3332885 1413 + 0.476999
NA Sde_2683 Preprotein translocase SecG subunitchromosome CDS3403101 4446 - 0.478632
NA Sde_2543 acetolactate synthase, small subunitchromosome CDS3225071 492 - 0.47561
NA Sde_2091 Chorismate synthasechromosome CDS2675313 1116 - 0.485663
NA Sde_1084 Serine O-acetyltransferasechromosome CDS1386596 834 - 0.51199
NA Sde_0388 branched-chain amino acid transferasechromosome CDS479069 930 - 0.488172
NA Sde_0120 transporter, MFS superfamilychromosome CDS150915 1194 + 0.463149
NA Sde_3290 transcriptional regulatorchromosome CDS4201633 1350 + 0.482222
NA Sde_1032 putative transmembrane sugar transporterchromosome CDS1320352 678 - 0.467552
NA Sde_2086 3-isopropylmalate dehydratase, large subunitchromosome CDS2669539 1419 - 0.503171
NA Sde_0234 nitrogen regulatory protein P-II (GlnB, GlnK)chromosome CDS294612 339 + 0.477876
NA Sde_0995 DNA polymerase III, alpha subunitchromosome CDS1276856 1416 + 0.507768
NA Sde_0408 conserved hypothetical proteinchromosome CDS504210 363 - 0.526171
NA Sde_1632 4-amino-4-deoxychorismate lyasechromosome CDS2095722 870 + 0.45977
NA Sde_1598 arginine decarboxylasechromosome CDS2053622 1920 - 0.460938
NA Sde_1456 ATP-dependent DNA helicase RecQchromosome CDS1878275 1185 - 0.506329
NA Sde_3345 Glutamate-5-semialdehyde dehydrogenasechromosome CDS4272678 1308 - 0.506881
NA Sde_2876 extracellular solute-binding protein, family 3chromosome CDS3643480 570 + 0.450877
NA Sde_2622 Cellulose binding, type IVchromosome CDS3318321 876 - 0.512557
NA Sde_0747 Anthranilate synthasechromosome CDS962931 1482 + 0.491228
NA Sde_0031 Oligopeptidase Achromosome CDS34108 2058 + 0.459184
NA Sde_1850 sensor protein GLPSchromosome CDS2340399 909 + 0.487349
NA Sde_3444 Arylesterasechromosome CDS4382355 645 - 0.466667
NA Sde_3197 putative sulfate uptake proteinchromosome CDS4074208 807 + 0.467162
NA Sde_2441 Ornithine carbamoyltransferasechromosome CDS3086110 912 + 0.458333
NA Sde_2030 oligopeptide ABC transporter permease proteinchromosome CDS2558209 882 + 0.452381
NA Sde_1644 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS2109063 1236 - 0.478155
NA Sde_2682 glutamate synthase small chainchromosome CDS3401633 1452 - 0.456612
NA Sde_0026 Shikimate 5-dehydrogenasechromosome CDS29694 837 + 0.51135
NA Sde_3169 ATP phosphoribosyltransferasechromosome CDS4046087 642 - 0.476636
NA Sde_2867 Glutaminasechromosome CDS3627530 924 - 0.441558
NA Sde_1892 high-affinity H+/gluconate symporterchromosome CDS2387582 1314 - 0.460426
NA Sde_3295 putative carboxypeptidasechromosome CDS4206722 1098 + 0.501822
NA Sde_0338 glycine-cleavage system protein T1chromosome CDS422315 1092 + 0.521062
NA Sde_0049 hypothetical proteinchromosome CDS53230 495 + 0.389899
NA Sde_2973 branched-chain amino acid ABC transporter, permease proteinchromosome CDS3776733 1152 - 0.436632
NA Sde_2476 Glycine dehydrogenase (decarboxylating)chromosome CDS3126768 2895 + 0.512263
NA Sde_2607 succinyl-diaminopimelate desuccinylasechromosome CDS3305833 1149 + 0.506527
NA Sde_0931 Ribosomal protein S19chromosome CDS1203474 1224 + 0.473856
NA Sde_1643 Xaa-Pro dipeptidasechromosome CDS2107762 1305 - 0.479693
NA Sde_1372 Queuosine biosynthesis proteinchromosome CDS1774935 1503 - 0.492349
NA Sde_1364 TonB-dependent receptorchromosome CDS1765301 813 - 0.474785
NA Sde_1221 Phosphoglucomutase, alpha-D-glucose phosphate-specificchromosome CDS1568637 408 + 0.482843
NA Sde_0929 elongation factor EF-Tuchromosome CDS1199589 1224 + 0.474673
NA Sde_2078 Citrate synthase Ichromosome CDS2658314 813 - 0.461255
NA Sde_0417 Glycine hydroxymethyltransferasechromosome CDS515130 1263 + 0.470309
NA Sde_0599 transporter, putativechromosome CDS749375 1506 - 0.468792
NA Sde_3675 Acetylglutamate kinasechromosome CDS4657645 903 - 0.425249
NA Sde_1365 putative putrescine transport system permease proteinchromosome CDS1766113 909 - 0.433443
NA Sde_1706 conserved hypothetical protein-signal peptide and transmembrane predictionchromosome CDS2180262 1203 - 0.448878
NA Sde_2675 Initiation factor 2chromosome CDS3393854 1236 - 0.472492
NA Sde_2972 response regulator receiver domain protein (CheY-like)chromosome CDS3775949 747 - 0.443106
NA Sde_1516 response regulator receiver domain protein (CheY-like)chromosome CDS1955429 906 - 0.398455
NA Sde_0230 response regulator receiver domain protein (CheY-like)chromosome CDS290825 696 + 0.468391
NA Sde_1150 Cellulose-binding, family IIchromosome CDS1488001 537 - 0.465549
NA Sde_3223 Ribose-phosphate pyrophosphokinasechromosome CDS4099163 348 + 0.485632
NA Sde_2649 Glutamate synthase, NADH/NADPH, small subunit 2chromosome CDS3350602 1611 - 0.47424
NA Sde_1024 Ribosomal protein S6chromosome CDS1307097 882 - 0.481859
NA Sde_0229 histidine kinasechromosome CDS290040 762 + 0.442257
NA Sde_2606 tetrahydrodipicolinate succinylase, putativechromosome CDS3304640 1035 + 0.499517
NA Sde_3057 Branched-chain amino acid transaminasechromosome CDS3909428 849 - 0.481743
NA Sde_3386 threonine dehydratase, biosyntheticchromosome CDS4320030 1512 - 0.498016
NA Sde_3496 hypothetical proteinchromosome CDS4451978 921 + 0.436482
NA Sde_2729 carbamoyl-phosphate synthase, small subunitchromosome CDS3457693 1164 - 0.481959
NA Sde_3282 putative hexuronate transporterchromosome CDS4191571 1275 - 0.465098
NA Sde_1984 transglutaminase-likechromosome CDS2493975 876 - 0.44863
NA Sde_1192 Aspartate kinasechromosome CDS1537125 1434 + 0.446304
NA Sde_1159 erythronate-4-phosphate dehydrogenasechromosome CDS1494222 1122 + 0.523173
NA Sde_0468 5,10-methylenetetrahydrofolate reductase (FADH)chromosome CDS570731 894 - 0.473154
NA Sde_2452 conserved hypothetical ebiP983chromosome CDS3099529 1227 - 0.447433
NA Sde_2010 Peptidase S26A, signal peptidase Ichromosome CDS2530548 3702 + 0.467585
NA Sde_0692 hypothetical proteinchromosome CDS894577 1200 + 0.4325
NA Sde_3222 4-diphosphocytidyl-2C-methyl-D-erythritol kinasechromosome CDS4098777 387 + 0.475452
NA Sde_2028 oligopeptide ABC transporter periplasmic oligopeptide-binding proteinchromosome CDS2555634 1635 + 0.442202
NA Sde_2147 chorismate mutase/prephenate dehydratasechromosome CDS2738462 1122 - 0.469697
NA Sde_2239 Cysteine synthasechromosome CDS2844672 891 - 0.47587
NA Sde_0363 acetylornithine deacetylasechromosome CDS448904 1164 - 0.520619
NA Sde_0219 Ureasechromosome CDS280240 303 + 0.458746
NA Sde_0204 Diaminopimelate epimerasechromosome CDS263064 741 - 0.418354
NA Sde_0146 Asparagine synthase (glutamine-hydrolyzing)chromosome CDS179644 1959 + 0.433895
NA Sde_1748 conserved hypothetical proteinchromosome CDS2227421 4884 + 0.449631
NA Sde_1209 Homoserine dehydrogenasechromosome CDS1552608 1353 + 0.474501
NA Sde_2603 Cellulose-binding, family IIchromosome CDS3302193 1224 + 0.486111
NA Sde_1413 cysteine desulfurasechromosome CDS1831195 1224 + 0.486111
NA Sde_1546 Ribosomal protein L35chromosome CDS1991873 903 - 0.429679
NA Sde_0238 conserved hypothetical proteinchromosome CDS297194 1245 - 0.509237
NA Sde_1911 glutamate synthase, putativechromosome CDS2412382 1536 - 0.472656
NA Sde_1081 conserved hypothetical proteinchromosome CDS1383701 1041 - 0.472622
NA Sde_2231 Aspartyl aminopeptidasechromosome CDS2835184 1299 - 0.454196
NA Sde_3059 transcriptional regulator, GntR family/aminotransferase, class Ichromosome CDS3911426 1422 + 0.522503
NA Sde_1670 Ricin B lectinchromosome CDS2137453 618 + 0.449838
NA Sde_1236 conserved hypothetical proteinchromosome CDS1584811 1998 - 0.492492
NA Sde_3481 conserved hypothetical drug transport transmembrane proteinchromosome CDS4435150 1182 + 0.481387
NA Sde_0346 transcriptional regulator, XRE familychromosome CDS430468 657 - 0.474886
NA Sde_3670 response regulator receiver domain protein (CheY-like)chromosome CDS4652638 1410 + 0.495035
NA Sde_1932 amino acid transporterchromosome CDS2436870 1314 + 0.460426
NA Sde_0753 anthranilate phosphoribosyltransferasechromosome CDS972632 1026 + 0.523392
NA Sde_1669 DNA internalization-related competence protein ComEC/Rec2chromosome CDS2136466 726 - 0.483471
NA Sde_0232 nitrogen regulatory protein P-II (GlnB, GlnK)chromosome CDS292701 339 + 0.433628
NA Sde_1889 putative transmembrane proteinchromosome CDS2384794 867 + 0.472895
NA Sde_3727 Cold shock proteinchromosome CDS4724878 1242 + 0.443639
NA Sde_1232 Aspartate transaminasechromosome CDS1580306 1194 + 0.501675
NA Sde_1366 putative putrescine transport ATP-binding proteinchromosome CDS1767018 1122 - 0.469697
NA Sde_2090 transporter, putativechromosome CDS2674116 1143 - 0.452318
NA Sde_3713 lipoprotein, putativechromosome CDS4700384 645 + 0.508527
NA Sde_3513 aminopeptidase P IIchromosome CDS4468390 1320 - 0.493939
NA Sde_1873 GGDEFchromosome CDS2363543 1020 + 0.484314
NA Sde_2440 acetylornithine aminotransferasechromosome CDS3084937 1167 + 0.473008
NA Sde_2423 Argininosuccinate synthasechromosome CDS3066398 1230 - 0.465854
NA Sde_2641 conserved hypothetical proteinchromosome CDS3341379 618 - 0.478964
NA Sde_0833 N-acetyl-gamma-glutamyl-phosphate reductasechromosome CDS1085136 1041 + 0.503362
NA Sde_1090 sodium/glucose cotransport proteinchromosome CDS1394429 1563 + 0.452335
NA Sde_2874 hypothetical proteinchromosome CDS3642198 186 - 0.403226
NA Sde_1230 TonB-dependent receptorchromosome CDS1577655 516 + 0.46124
NA Sde_2071 Dihydrolipoamide dehydrogenasechromosome CDS2650350 1194 - 0.495812
NA Sde_1332 Phosphoserine transaminasechromosome CDS1726547 1116 + 0.488351
NA Sde_2085 3-isopropylmalate dehydratasechromosome CDS2668876 648 - 0.458333
NA Sde_0936 Ribosomal protein L14chromosome CDS1209468 384 + 0.440104
NA Sde_0339 glycine cleavage system protein H1chromosome CDS423617 393 + 0.458015
NA Sde_1012 aminotransferases class-Ichromosome CDS1293591 1071 + 0.492063
NA Sde_3168 Histidinol dehydrogenasechromosome CDS4044739 1308 - 0.514526
NA Sde_1663 1-aminocyclopropane-1-carboxylate deaminasechromosome CDS2130657 1011 + 0.489614
NA Sde_1300 Aspartate kinasechromosome CDS1690011 1227 + 0.461288
NA Sde_2372 Electron transport complex, RnfABCDGE type, E subunitchromosome CDS3003134 1140 - 0.411404
NA Sde_0220 Ureasechromosome CDS280559 306 + 0.447712
NA Sde_1164 aminotransferase, class Ichromosome CDS1499898 1272 - 0.494497
NA Sde_2027 periplasmic oligopeptide-binding protein precursorchromosome CDS2553958 1668 + 0.446643
NA Sde_0638 methyl-accepting chemotaxis sensory transducerchromosome CDS806475 2298 + 0.478242
NA Sde_3537 putative acetyltransferasechromosome CDS4493145 1242 + 0.470209
NA Sde_0487 methyl-accepting chemotaxis sensory transducerchromosome CDS599325 594 + 0.491582
NA Sde_2975 branched-chain amino acid ABC transporter, periplasmic amino acid-binding proteinchromosome CDS3778928 1251 - 0.449241
NA Sde_3374 Nicotinamide mononucleotide transporter PnuCchromosome CDS4300485 3003 + 0.51715
NA Sde_2029 Phosphoglycerate mutase 1chromosome CDS2557274 936 + 0.475427
NA Sde_1597 Acyl carrier protein (ACP)chromosome CDS2052365 1200 - 0.453333
NA Sde_2298 2-isopropylmalate synthasechromosome CDS2922812 1662 - 0.470517
NA Sde_2145 sulfate adenylyltransferase, subunit 2chromosome CDS2735246 912 - 0.48136
NA Sde_0489 response regulator receiver domain protein (CheY-like)chromosome CDS600760 732 + 0.505464
NA Sde_1671 Carbohydrate-binding familychromosome CDS2138123 1335 - 0.453184