Gene list
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COG category: Amino acid transport and metabolism
Genomic element: chromosome 2
Number of genes found: 120
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Rhodobacter sphaeroides 2.4.1, 2.4.1; ATCC BAA-808 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | RSP_3563 | putative FAD-dependent glycerol-3-phosphate dehydrogenase protein | chromosome 2 | CDS | 658350 | 1107 | + | 0.736224 |
NA | RSP_3336 | ABC spermidine/putrescine transporter, inner membrane subunit | chromosome 2 | CDS | 399548 | 864 | - | 0.621528 |
NA | RSP_3059 | ABC proline/glycine betaine transporter, periplasmic substrate-binding protein | chromosome 2 | CDS | 99471 | 1002 | - | 0.688623 |
NA | RSP_3516 | ABC polyamine/opine transporter, ATPase subunit | chromosome 2 | CDS | 595543 | 990 | + | 0.69596 |
NA | RSP_3297 | ABC branched-chain amino acid transporter, periplasmic binding protein | chromosome 2 | CDS | 355940 | 1203 | - | 0.653367 |
NA | RSP_6211 | hypothetical protein | chromosome 2 | CDS | 31225 | 297 | + | 0.737374 |
NA | RSP_3334 | HyuE hydantoin racemase | chromosome 2 | CDS | 398053 | 618 | - | 0.775081 |
NA | RSP_3457 | ABC polar amino acid transporter, periplasmic binding protein | chromosome 2 | CDS | 527231 | 864 | + | 0.677083 |
NA | RSP_3231 | ABC peptide transporter, periplasmic binding protein | chromosome 2 | CDS | 289521 | 1599 | + | 0.637899 |
NA | RSP_3517 | ABC polyamine/opine transporter, inner membrane subunit | chromosome 2 | CDS | 596537 | 849 | + | 0.677267 |
NA | RSP_3035 | Putative transporter, major facilitator superfamily (MFS) | chromosome 2 | CDS | 68309 | 1278 | + | 0.695618 |
NA | RSP_3034 | ABC peptide/opine transporter, periplasmic substrate-binding protein | chromosome 2 | CDS | 66628 | 1560 | + | 0.672436 |
NA | RSP_3032 | ABC peptide/opine transporter, ATPase subunit | chromosome 2 | CDS | 64621 | 972 | + | 0.712963 |
NA | RSP_3248 | ABC peptide transporter, periplasmic binding protein | chromosome 2 | CDS | 304951 | 1512 | - | 0.62963 |
NA | RSP_3745 | ABC amino acid transporter, ATPase subunit | chromosome 2 | CDS | 870342 | 801 | - | 0.670412 |
NA | RSP_3522 | ABC peptide transporter, inner membrane subunit | chromosome 2 | CDS | 601149 | 879 | - | 0.662116 |
NA | RSP_3257 | ABC peptide transporter, inner membrane subunit | chromosome 2 | CDS | 314543 | 921 | - | 0.666667 |
NA | RSP_6180 | conserved hypothetical membrane protein | chromosome 2 | CDS | 464855 | 1200 | + | 0.688333 |
NA | RSP_3456 | Putative dihydrodipicolinate synthase | chromosome 2 | CDS | 525796 | 927 | + | 0.695793 |
NA | RSP_3655 | Dihydrodipicolinate synthase/N-acetylneuraminate lyase | chromosome 2 | CDS | 763763 | 906 | - | 0.68543 |
NA | RSP_3030 | ABC peptide/opine transporter, inner membrane subunit | chromosome 2 | CDS | 62785 | 945 | + | 0.684656 |
NA | RSP_3395 | ABC opine/polyamine transporter, inner membrane subunit | chromosome 2 | CDS | 459079 | 873 | - | 0.679267 |
NA | RSP_3235 | ABC peptide transporter, ATPase subunit | chromosome 2 | CDS | 293109 | 849 | + | 0.677267 |
NA | RSP_3767 | conserved hypothetical protein | chromosome 2 | CDS | 891012 | 318 | - | 0.710692 |
NA | RSP_3587 | N-(5'-phosphoribosyl)anthranilate isomerase | chromosome 2 | CDS | 680191 | 639 | - | 0.713615 |
NA | RSP_3057 | ABC proline/glycine betaine transporter, ATPase subunit | chromosome 2 | CDS | 97408 | 1092 | - | 0.696886 |
NA | RSP_3566 | dimethylglycine dehydrogenase | chromosome 2 | CDS | 661269 | 2496 | - | 0.667067 |
NA | RSP_3255 | ABC peptide transporter, periplasmic binding protein | chromosome 2 | CDS | 312899 | 1623 | - | 0.658041 |
NA | RSP_3021 | putative catechol 2,3-dioxygenase | chromosome 2 | CDS | 51852 | 915 | - | 0.66776 |
NA | RSP_3550 | Aminoacyl-transfer RNA synthetase, class II | chromosome 2 | CDS | 639999 | 1098 | - | 0.74408 |
NA | RSP_3250 | ABC peptide transporter, inner membrane subunit | chromosome 2 | CDS | 308129 | 828 | - | 0.682367 |
NA | RSP_3308 | possible transporter, DME family, DMT superfamily | chromosome 2 | CDS | 368835 | 924 | - | 0.741342 |
NA | RSP_3039 | ABC permidine/putrescine transporter, inner membrane subunit | chromosome 2 | CDS | 73363 | 852 | - | 0.66784 |
NA | RSP_3346 | 5-methyltetrahydrofolate--homocysteinemethyltran sferase | chromosome 2 | CDS | 411146 | 2727 | - | 0.685735 |
NA | RSP_3518 | ABC polyamine/opine transporter, inner membrane subunit | chromosome 2 | CDS | 597387 | 786 | + | 0.673028 |
NA | RSP_3155 | Thiamine pyrophosphate-requiring enzyme | chromosome 2 | CDS | 203970 | 1653 | - | 0.735632 |
NA | RSP_3293 | ABC branched-chain amino acid transporter, inner membrane subunit | chromosome 2 | CDS | 352580 | 999 | - | 0.665666 |
NA | RSP_3525 | ABC peptide transporter, periplasmic binding protein | chromosome 2 | CDS | 604763 | 1608 | - | 0.66107 |
NA | RSP_3449 | Putative allophanate hydrolase subunit 2 | chromosome 2 | CDS | 519194 | 1065 | - | 0.737089 |
NA | RSP_3335 | ABC spermidine/putrescine transporter, inner membrane subunit | chromosome 2 | CDS | 398710 | 837 | - | 0.676225 |
NA | RSP_3718 | conserved hypothetical protein | chromosome 2 | CDS | 840434 | 1452 | - | 0.685262 |
NA | RSP_3460 | ABC polar amino acid transporter, inner membrane subunit | chromosome 2 | CDS | 529593 | 666 | + | 0.686186 |
NA | RSP_6195 | Hypothetical protein | chromosome 2 | CDS | 743670 | 222 | - | 0.644144 |
NA | RSP_3459 | ABC polar amino acid transporter, inner membrane subunit | chromosome 2 | CDS | 528909 | 681 | + | 0.694567 |
NA | RSP_3742 | ABC amino acid transporter, periplasmic binding protein | chromosome 2 | CDS | 867901 | 792 | - | 0.666667 |
NA | RSP_3038 | ABC permidine/putrescine transporter, inner membrane subunit | chromosome 2 | CDS | 72551 | 804 | - | 0.66791 |
NA | RSP_3396 | ABC opine/polyamine transporter, ATPase subunit | chromosome 2 | CDS | 459948 | 1119 | - | 0.709562 |
NA | RSP_3227 | Lysine 2,3-aminomutase | chromosome 2 | CDS | 285991 | 1023 | + | 0.699902 |
NA | RSP_3471 | hypothetical protein | chromosome 2 | CDS | 540413 | 687 | + | 0.727802 |
NA | RSP_3393 | ABC opine/polyamine transporter, inner membrane subunit | chromosome 2 | CDS | 458274 | 795 | - | 0.666667 |
NA | RSP_3347 | methionine synthase, 5-methyltetrahydrofolate--homocysteine methyltransferase | chromosome 2 | CDS | 413869 | 1080 | - | 0.696296 |
NA | RSP_3245 | Possible transporter, Major facilitator superfamily (MFS) | chromosome 2 | CDS | 301985 | 1236 | + | 0.73301 |
NA | RSP_3233 | ABC peptide transporter, inner membrane subunit | chromosome 2 | CDS | 292202 | 903 | + | 0.682171 |
NA | RSP_3744 | ABC amino acid transporter, inner membrane subunit | chromosome 2 | CDS | 869686 | 660 | - | 0.659091 |
NA | RSP_3442 | 2-hydroxyacid dehydrogenase | chromosome 2 | CDS | 512299 | 942 | + | 0.71656 |
NA | RSP_3437 | Putative amino acid aminotransferase | chromosome 2 | CDS | 507715 | 1221 | + | 0.699427 |
NA | RSP_3515 | ABC polyamine/opine transporter, periplasmic binding protein | chromosome 2 | CDS | 594499 | 1038 | + | 0.688825 |
NA | RSP_3524 | ABC peptide transporter, periplasmic binding protein | chromosome 2 | CDS | 603069 | 1605 | - | 0.683489 |
NA | RSP_3747 | putative dipeptidase | chromosome 2 | CDS | 872050 | 1179 | + | 0.684478 |
NA | RSP_3033 | ABC peptide/opine transporter, ATPase subunit | chromosome 2 | CDS | 65589 | 1002 | + | 0.715569 |
NA | RSP_3806 | hypothetical protein | chromosome 2 | CDS | 5736 | 1089 | - | 0.652893 |
NA | RSP_3444 | Putative Xaa-Pro aminopeptidase | chromosome 2 | CDS | 514445 | 1185 | - | 0.731646 |
NA | RSP_3003 | hypothetical protein | chromosome 2 | CDS | 39397 | 297 | + | 0.468013 |
NA | RSP_3296 | ABC branched-chain amino acid transporter, ATPase subunit | chromosome 2 | CDS | 355164 | 774 | - | 0.664083 |
NA | RSP_3523 | ABC peptide transporter, inner membrane subunit | chromosome 2 | CDS | 602038 | 966 | - | 0.654244 |
NA | RSP_3232 | ABC peptide transporter, inner membrane subunit | chromosome 2 | CDS | 291187 | 1008 | + | 0.64881 |
NA | RSP_3026 | Transcriptional regulator, MocR family | chromosome 2 | CDS | 57004 | 1371 | - | 0.719183 |
NA | RSP_3447 | Putative dehydrogenase | chromosome 2 | CDS | 517543 | 996 | - | 0.752008 |
NA | RSP_3040 | ABC permidine/putrescine transporter, periplasmic substrate-binding protein | chromosome 2 | CDS | 74227 | 1158 | - | 0.665803 |
NA | RSP_3258 | ABC peptide transporter, inner membrane subunit | chromosome 2 | CDS | 315463 | 888 | - | 0.697072 |
NA | RSP_3455 | D-alanine aminotransferase | chromosome 2 | CDS | 524927 | 858 | + | 0.698135 |
NA | RSP_3251 | ABC peptide transporter, inner membrane subunit | chromosome 2 | CDS | 308953 | 939 | - | 0.687966 |
NA | RSP_3519 | putative proline racemase | chromosome 2 | CDS | 598216 | 1014 | + | 0.66568 |
NA | RSP_6161 | hypothetical protein | chromosome 2 | CDS | 93910 | 285 | - | 0.722807 |
NA | RSP_3607 | hypothetical protein | chromosome 2 | CDS | 702698 | 2028 | + | 0.74359 |
NA | RSP_3439 | Aspartate aminotransferase | chromosome 2 | CDS | 509406 | 1209 | + | 0.693135 |
NA | RSP_3426 | conserved hypothetical protein | chromosome 2 | CDS | 493970 | 1203 | - | 0.676642 |
NA | RSP_3463 | putative hydantoin racemase | chromosome 2 | CDS | 532689 | 642 | + | 0.721184 |
NA | RSP_3446 | Putative amino acid hydrolase | chromosome 2 | CDS | 516266 | 1281 | - | 0.733802 |
NA | RSP_3295 | ABC branched-chain amino acid transporter, ATPase subunit | chromosome 2 | CDS | 354469 | 699 | - | 0.663805 |
NA | RSP_3389 | Isocitrate/isopropylmalate dehydrogenase / tartrate dehydrogenase | chromosome 2 | CDS | 453740 | 1074 | + | 0.685289 |
NA | RSP_3053 | Possible dioxygenase/glyoxalase family protein | chromosome 2 | CDS | 91912 | 930 | + | 0.722581 |
NA | RSP_3058 | ABC proline/glycine betaine transporter, inner membrane subunit | chromosome 2 | CDS | 98492 | 912 | - | 0.66886 |
NA | RSP_3180 | Transglutaminase-like enzyme | chromosome 2 | CDS | 231968 | 813 | + | 0.677737 |
NA | RSP_3031 | ABC peptide/opine transporter, inner membrane subunit | chromosome 2 | CDS | 63731 | 894 | + | 0.696868 |
NA | RSP_3292 | Glucose-methanol-choline oxidoreductase | chromosome 2 | CDS | 350977 | 1602 | - | 0.687266 |
NA | RSP_3337 | ABC spermidine/putrescine transporter, periplasmic binding protein | chromosome 2 | CDS | 400644 | 1266 | - | 0.64534 |
NA | RSP_3338 | ABC spermidine/putrescine transporter, ATPase subunit | chromosome 2 | CDS | 401935 | 978 | - | 0.691207 |
NA | RSP_3065 | Putative transporter, Major facilitator superfamily (MFS) | chromosome 2 | CDS | 105579 | 1134 | + | 0.738095 |
NA | RSP_3585 | Tryptophan synthase beta chain | chromosome 2 | CDS | 678504 | 1230 | - | 0.656911 |
NA | RSP_3041 | ABC permidine/putrescine transporter, ATPase subunit | chromosome 2 | CDS | 75444 | 1098 | - | 0.691257 |
NA | RSP_1419 | TRAP-T family transporter, small (4 TMs) inner membrane subunit | chromosome 2 | CDS | 935848 | 492 | - | 0.735772 |
NA | RSP_3450 | conserved hypothetical protein | chromosome 2 | CDS | 520255 | 738 | - | 0.710027 |
NA | RSP_3294 | ABC branched-chain amino acid transporter, inner membrane subunit | chromosome 2 | CDS | 353580 | 888 | - | 0.652027 |
NA | RSP_3397 | ABC opine/polyamine transporter, periplasmic binding protein | chromosome 2 | CDS | 461068 | 1044 | - | 0.676245 |
NA | RSP_3601 | Lipolytic enzyme, G-D-S-L family | chromosome 2 | CDS | 694440 | 627 | - | 0.708134 |
NA | RSP_3458 | ABC polar amino acid transporter, ATPase subunit | chromosome 2 | CDS | 528164 | 741 | + | 0.668016 |
NA | RSP_3236 | ABC peptide transporter, ATPase subunit | chromosome 2 | CDS | 293957 | 849 | + | 0.687868 |
NA | RSP_3388 | putative Isocitrate/isopropylmalate dehydrogenase / tartrate dehydrogenase ttuC | chromosome 2 | CDS | 452647 | 1083 | + | 0.708218 |
amiC | RSP_3260 | Putative negative amidase regulator, AmiC | chromosome 2 | CDS | 316924 | 1062 | - | 0.689266 |
argE | RSP_3695 | putative acetylornithine deacetylase (acetylornithinase) | chromosome 2 | CDS | 815720 | 1095 | - | 0.728767 |
aroA | RSP_3592 | EPSP synthase, 3-phosphoshikimate 1-carboxyvinyltransferase | chromosome 2 | CDS | 684191 | 1338 | - | 0.715994 |
aroQ | RSP_3376 | 3 dehydroquinase dehydratase, class II | chromosome 2 | CDS | 441010 | 444 | - | 0.671171 |
cxp | RSP_3832 | putative thermostable carboxypeptidase 1 | chromosome 2 | CDS | 27084 | 1482 | + | 0.692982 |
cysE | RSP_3060 | possible O-acetylserine synthase | chromosome 2 | CDS | 101473 | 534 | + | 0.696629 |
dadA | RSP_3113 | D-amino acid dehydrogenase small subunit | chromosome 2 | CDS | 157517 | 1311 | - | 0.723112 |
dapA | RSP_3408 | Dihydrodipicolinate synthetase | chromosome 2 | CDS | 474142 | 885 | - | 0.681356 |
fdh | RSP_3104 | Putative Glutathione-dependent formaldehyde dehydrogenase | chromosome 2 | CDS | 147887 | 1185 | + | 0.670042 |
ggt | RSP_3272 | Gamma-glutamyltranspeptidase | chromosome 2 | CDS | 330105 | 1788 | - | 0.721476 |
hisG | RSP_3549 | ATP phosphoribosyltransferase | chromosome 2 | CDS | 639292 | 711 | - | 0.694796 |
hutH | RSP_3574 | putative histidine ammonia-lyase | chromosome 2 | CDS | 668567 | 1572 | - | 0.688931 |
ilvD | RSP_3074 | Dihydroxy-acid and 6-phosphogluconate dehydratase | chromosome 2 | CDS | 115149 | 1839 | - | 0.694399 |
iolD | RSP_3284 | Acetolactate synthase | chromosome 2 | CDS | 340942 | 1845 | + | 0.717615 |
lguL | RSP_3237 | Lactoylglutathione lyase | chromosome 2 | CDS | 294958 | 396 | + | 0.631313 |
proA | RSP_3824 | Gamma-glutamyl phosphate reductase GPR | chromosome 2 | CDS | 20095 | 1263 | + | 0.702296 |
proB1 | RSP_3823 | glutamate 5-kinase | chromosome 2 | CDS | 18932 | 1113 | + | 0.712489 |
proC | RSP_3364 | Pyrroline-5-carboxylate reductase | chromosome 2 | CDS | 428054 | 768 | + | 0.742188 |
selD | RSP_3716 | selenide, water dikinase (selenophosphate synthetase) | chromosome 2 | CDS | 838858 | 1056 | + | 0.726326 |
serA | RSP_3407 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding subunit | chromosome 2 | CDS | 473195 | 951 | - | 0.723449 |
speB1 | RSP_3743 | putative agmatinase | chromosome 2 | CDS | 868720 | 963 | - | 0.709242 |