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2024-05-25 11:11:17

Gene list

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COG category: Amino acid transport and metabolism
Genomic element: chromosome 2

Number of genes found: 138

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PBPRB1015 hypothetical proteinchromosome 2 CDS1156868 276 - 0.380435
NA PBPRB0490 hypothetical proteinchromosome 2 CDS571369 1560 - 0.492308
NA PBPRB1949 hypothetical proteinchromosome 2 CDS2142594 1302 + 0.447005
NA PBPRB0708 hypothetical proteinchromosome 2 CDS829373 2667 - 0.425197
NA PBPRB0711 hypothetical carboxypeptidase G2chromosome 2 CDS834757 1104 + 0.433877
NA PBPRB1477 hypothetical proteinchromosome 2 CDS1633072 345 + 0.385507
NA PBPRB0322 hypothetical proteinchromosome 2 CDS367104 1374 - 0.438865
NA PBPRB0336 hypothetical proteinchromosome 2 CDS385003 903 + 0.389812
NA PBPRB1324 putative glycine cleavage system P proteinchromosome 2 CDS1467669 2880 + 0.461458
NA PBPRB0624 hypothetical proteinchromosome 2 CDS746350 633 + 0.350711
NA PBPRB0935 hypothetical proteichromosome 2 CDS1075339 693 + 0.405483
NA PBPRB1925 hypothetical proteinchromosome 2 CDS2118893 705 + 0.44539
NA PBPRB1268 conserved hypothetical proteinchromosome 2 CDS1414191 507 - 0.357002
NA PBPRB0992 hypothetical proteinchromosome 2 CDS1134046 336 - 0.327381
NA PBPRB0889 hypothetical proteinchromosome 2 CDS1026914 1119 - 0.38874
NA PBPRB0339 hypothetical proteinchromosome 2 CDS387793 735 + 0.390476
NA PBPRB1706 hypothetical proteinchromosome 2 CDS1855126 387 - 0.403101
NA PBPRB1421 hypothetical arginase family proteinchromosome 2 CDS1578641 987 - 0.383992
NA PBPRB0497 hypothetical proteinchromosome 2 CDS578772 447 - 0.357942
NA PBPRB0129 hypothetical proteinchromosome 2 CDS152308 399 + 0.363409
NA PBPRB0382 putative tryptophanasechromosome 2 CDS436848 1401 - 0.4404
NA PBPRB1341 conserved hypothetical proteinchromosome 2 CDS1495159 1086 + 0.406077
NA PBPRB1647 hypothetical threonine efflux proteinchromosome 2 CDS1794886 621 - 0.405797
NA PBPRB1416 hypothetical proteinchromosome 2 CDS1573586 1179 - 0.431722
NA PBPRB0395 hypothetical proteinchromosome 2 CDS450900 426 + 0.387324
AGR_C_41 PBPRB1744 putative glycine betaine-binding ABC transporterchromosome 2 CDS1896925 951 - 0.436383
AGR_L_71 PBPRB0476 putative acetolactate synthasechromosome 2 CDS557695 1854 + 0.469256
ALR3187 PBPRB1264 putative amino acid ABC transporter, permease proteinchromosome 2 CDS1408586 831 + 0.412756
ARCB PBPRB1924 putative ornithine carbamoyltransferasechromosome 2 CDS2117137 1002 + 0.43014
ASPC-1 PBPRB0692 putative amino acid biosynthesisaminotransferasechromosome 2 CDS811601 1182 + 0.433164
ATU2280 PBPRB1743 putative permease of ABC transporterchromosome 2 CDS1895932 849 - 0.466431
ATU4267 PBPRB0453 hypothetical proteinchromosome 2 CDS526897 381 - 0.446194
ATU4267 PBPRB0249 hypothetical proteinchromosome 2 CDS283965 375 + 0.578667
ATU4786 PBPRB0373 putative iron(III) ABC transporter, ATP-binding proteinchromosome 2 CDS423947 1071 - 0.416433
ATU5339 PBPRB0012 putative membrane proteinchromosome 2 CDS17264 888 + 0.426802
BA4368 PBPRB0777 putative peptidase, M20A familychromosome 2 CDS909385 1107 - 0.419151
BH0660 PBPRB1997 putative sodium/proline symporterchromosome 2 CDS2198590 1497 - 0.434202
BP3797 PBPRB0519 hypothetical proteinchromosome 2 CDS606208 636 + 0.402516
BPP3767 PBPRB1180 putative 4-hydroxyphenylpyruvate dioxygenasechromosome 2 CDS1330816 1098 - 0.412568
BRNQ PBPRB1464 hypothetical branched chain amino acid transporterchromosome 2 CDS1619589 1308 + 0.414373
BRNQ PBPRB1463 hypothetical branched chain amino acid transporterchromosome 2 CDS1617848 1296 + 0.411265
C1296 PBPRB2022 conserved hypothetical proteinchromosome 2 CDS2231869 741 - 0.422402
CBU0520 PBPRB1119 putative hydroxymethylglutaryl-CoA lyasechromosome 2 CDS1264571 903 + 0.409745
CJ0087 PBPRB0046 hypothetical aspartate ammonia-lyasechromosome 2 CDS57895 1488 + 0.468414
CJ0731 PBPRB0178 putative permease of ABC transporterchromosome 2 CDS199161 792 + 0.435606
CPE0447 PBPRB0895 hypothetical proteinchromosome 2 CDS1034438 396 + 0.388889
CV0173 PBPRB1813 hypothetical 3-deoxy-D-arabino-heptulosonate 7-phosphate synthasechromosome 2 CDS1978686 1083 + 0.480148
CV0315 PBPRB0702 putative oligoendopeptidase Fchromosome 2 CDS821117 1848 - 0.424242
CV1409 PBPRB0447 putative serine transporterchromosome 2 CDS520531 1395 + 0.42724
CV1934 PBPRB1415 putative homocysteine synthasechromosome 2 CDS1572173 1269 + 0.44602
CV3780 PBPRB1918 putative carbamate kinasechromosome 2 CDS2112280 915 + 0.456831
EBIG1973 PBPRB0078 hypothetical efflux proteinchromosome 2 CDS100104 606 - 0.415842
ECS2451 PBPRB0591 hypothetical succinylarginine dihydrolasechromosome 2 CDS708774 1335 + 0.42397
EF2567 PBPRB1545 Hypothetical selenophosphate synthasechromosome 2 CDS1695833 972 - 0.445473
GLTS PBPRB1242 putative glutamate permeasechromosome 2 CDS1390241 918 + 0.40305
GNTP-2 PBPRB1409 putative DsdX permeasechromosome 2 CDS1566270 648 - 0.415123
HCBP1 PBPRB0781 hypothetical proteinchromosome 2 CDS912337 885 + 0.385311
HISC PBPRB1129 putative histidinol phosphate aminotransferasechromosome 2 CDS1275667 1089 - 0.424242
HISW PBPRB1789 putative permeasechromosome 2 CDS1954670 891 - 0.450056
JHP0012 PBPRB0876 hypothetical proteinchromosome 2 CDS1012228 825 + 0.407273
LL2032 PBPRB0031 hypothetical aminotransferasechromosome 2 CDS42164 1125 + 0.432
LTAA PBPRB0795 putative threonine aldolasechromosome 2 CDS927198 1008 - 0.415675
MLL2742 PBPRB1742 putative ATP-binding component of ABC transporterchromosome 2 CDS1894727 1203 - 0.45054
MM0040 PBPRB1788 putative glycine betaine ABC transporter ATP-binding proteinchromosome 2 CDS1953385 1284 - 0.436137
PA2923 PBPRB1128 hypothetical amino acid ABC transporter, periplasmic amino acid-binding proteinchromosome 2 CDS1274874 816 - 0.401961
PA3862 PBPRB0030 hypothetical proteinchromosome 2 CDS41148 969 + 0.449948
PA4804 PBPRB1917 hypothetical amino acid permeasechromosome 2 CDS2110572 1392 - 0.416667
PLU0248 PBPRB1241 hypothetical proteinchromosome 2 CDS1389931 288 + 0.392361
PLU3991 PBPRB1848 putative sodium/dicarboxylate symporterchromosome 2 CDS2025969 1236 + 0.440129
PM0014 PBPRB0596 putative glyoxylase I family proteinchromosome 2 CDS714586 384 - 0.393229
PP0266 PBPRB1916 hypothetical proteinchromosome 2 CDS2109446 765 - 0.435294
PP3405 PBPRB0323 hypothetical transporter, LysE familychromosome 2 CDS368636 615 + 0.452033
PP3997 PBPRB0206 hypothetical glycosyl transferasechromosome 2 CDS228198 990 - 0.472727
PP4490 PBPRB1164 putative phenylalanine-4-hydroxylasechromosome 2 CDS1312542 813 - 0.414514
PRO0756 PBPRB1060 conserved hypothetical proteinchromosome 2 CDS1205119 909 - 0.40484
PSPTO114 PBPRB1890 conserved hypothetical proteinchromosome 2 CDS2074108 609 - 0.413793
R01549 PBPRB1319 putative glycine cleavage system T proteinchromosome 2 CDS1461481 996 - 0.468875
RA0042 PBPRB1263 putative amino acid ABC transporterchromosome 2 CDS1407788 762 + 0.413386
RA0384 PBPRB0782 hypothetical glyoxalase/Bleomycin resistanceprotein/Dioxygenase family proteinchromosome 2 CDS913549 435 + 0.432184
RA0951 PBPRB1790 hypothetical ABC transporter, substrate binding proteinchromosome 2 CDS1955621 999 - 0.456456
RB13062 PBPRB0613 hypothetical proteinchromosome 2 CDS731734 498 - 0.363454
RS00779 PBPRB0112 putative histidine ammonia-lyase proteinchromosome 2 CDS135959 1557 - 0.464355
RS01739 PBPRB0783 conserved hypothetical proteinchromosome 2 CDS913977 888 + 0.425676
RS02747 PBPRB0462 hypothetical acetolactate synthase, iolDchromosome 2 CDS539421 1875 + 0.445333
RSC0073 PBPRB1092 conserved hypothetical proteinchromosome 2 CDS1236623 645 + 0.413953
RSC2008 PBPRB1073 conserved hypothetical proteinchromosome 2 CDS1220888 1155 + 0.431169
S1885 PBPRB0366 conserved hypothetical proteinchromosome 2 CDS414998 888 - 0.422297
S2570 PBPRB1408 putative D-serine dehydratasechromosome 2 CDS1564923 1332 - 0.416667
S3256 PBPRB0454 putative cystathionine beta-lyasechromosome 2 CDS527490 1188 + 0.436869
SAV1788 PBPRB1102 hypothetical saccharopine dehydrogenasechromosome 2 CDS1248745 1062 - 0.435028
SCI35.35 PBPRB0862 hypothetical proteinchromosome 2 CDS994113 1368 - 0.42617
SCM1.35C PBPRB0253 Conserved hypothetical proteinchromosome 2 CDS286538 378 - 0.338624
SCO1054 PBPRB1853 putative NifS-related proteinchromosome 2 CDS2032741 1242 - 0.4219
SCO6483 PBPRB0767 putative multidrug transporterchromosome 2 CDS898404 1410 + 0.431206
SCRA PBPRB0227 putative ScrAchromosome 2 CDS255806 1404 + 0.401709
SELA PBPRB1540 Hypothetical L-seryl-tRNA(ser) selenium transferasechromosome 2 CDS1690447 1416 - 0.423729
SMB21414 PBPRB0277 hypothetical amino acid decarboxylasechromosome 2 CDS318056 1470 - 0.456463
SO0122 PBPRB1131 putative transporter proteinchromosome 2 CDS1277846 615 - 0.421138
SO0450 PBPRB1150 putative transport proteinchromosome 2 CDS1296741 1161 + 0.393626
SOA0102 PBPRB0069 hypothetical transposasechromosome 2 CDS86671 1209 - 0.406948
SOA0102 PBPRB0099 hypothetical ISSod3, transposasechromosome 2 CDS120024 1209 + 0.402812
SPYM3_09 PBPRB1320 putative sodium/alanine symporterchromosome 2 CDS1462678 1362 - 0.441997
STM1598 PBPRB1592 Hypothetical transcriptional regulatorchromosome 2 CDS1740887 1419 - 0.427061
STM3625 PBPRB0242 putative transport system permease proteinchromosome 2 CDS275295 1332 + 0.382132
STY2588 PBPRB0280 hypothetical proteinchromosome 2 CDS322678 1095 - 0.43653
STY4732 PBPRB0040 conserved hypothetical proteinchromosome 2 CDS52150 1164 - 0.438144
T0506 PBPRB1850 hypothetical amino acid racemasechromosome 2 CDS2028839 1086 + 0.517495
T1016 PBPRB0172 putative membrane proteinchromosome 2 CDS193212 915 - 0.419672
T2118 PBPRB1262 putative 3-deoxy-D-arabinoheptulosonate-7-phosphate synthasechromosome 2 CDS1406286 1053 - 0.422602
T4500 PBPRB1784 hypothetical carbamate kinasechromosome 2 CDS1949259 930 - 0.410753
TTE1680 PBPRB1552 Hypothetical aminopeptidasechromosome 2 CDS1703460 1413 + 0.408351
VC2566 PBPRB1803 conserved hypothetical proteinchromosome 2 CDS1968909 876 + 0.428082
VCA1040 PBPRB1266 putative amino acid ABC transporter, permease proteinchromosome 2 CDS1410280 948 + 0.425105
VP0623 PBPRB1593 hypothetical glycine/D-amino acid oxidasechromosome 2 CDS1742586 1230 - 0.443902
VP1719 PBPRB1487 putative aspartokinasechromosome 2 CDS1642657 630 + 0.430159
VP1719 PBPRB1489 hypothetical proteinchromosome 2 CDS1644300 372 + 0.384409
VPA1112 PBPRB1745 putative choline dehydrogenasechromosome 2 CDS1898022 1707 - 0.469244
VPA1215 PBPRB1911 hypothetical proteinchromosome 2 CDS2104574 879 + 0.450512
VPA1512 PBPRB0228 putative ScrBchromosome 2 CDS257264 933 + 0.38478
VPA1529 PBPRB1902 hypothetical proteinchromosome 2 CDS2092891 924 + 0.365801
VV12260 PBPRB0319 putative L-serine dehydratase 1chromosome 2 CDS361683 1371 - 0.416484
VV20937 PBPRB1506 hypothetical proteinchromosome 2 CDS1657592 1200 + 0.386667
VV21456 PBPRB0127 putative permeasechromosome 2 CDS149916 897 + 0.424749
VV21676 PBPRB1865 hypothetical transport proteinchromosome 2 CDS2045104 1503 - 0.413839
VVA0007 PBPRB0536 hypothetical amino acid ABC transporterchromosome 2 CDS624874 759 - 0.375494
VVA0361 PBPRB0979 hypothetical protease IIchromosome 2 CDS1115762 2010 - 0.405473
VVA0530 PBPRB1179 conserved hypothetical proteinchromosome 2 CDS1329588 1071 + 0.399627
VVA0692 PBPRB1323 putative glycine cleavage system H proteinchromosome 2 CDS1467091 378 + 0.428571
VVA0693 PBPRB1322 putative glycine/serine hydroxymethyltransferasechromosome 2 CDS1465604 1296 + 0.443673
VVA1382 PBPRB1723 putative transporterchromosome 2 CDS1873455 1713 - 0.450088
WS0279 PBPRB1265 putative amino acid ABC transporterchromosome 2 CDS1409468 810 + 0.432099
WS1753 PBPRB1921 hypothetical ornithine carbamoyltransferasechromosome 2 CDS2114326 1047 + 0.407832
XYLE PBPRB0460 hyopthetical permeasechromosome 2 CDS536404 1443 - 0.419958
Y2787 PBPRB1174 putative periplasmic L-asparaginase IIchromosome 2 CDS1325579 1065 - 0.414084
YHJX PBPRB1915 putative resistance protein, yhjXchromosome 2 CDS2108142 1215 + 0.444444
YPO1315 PBPRB0401 hypothetical hydrolasechromosome 2 CDS457200 705 - 0.41844
YPO3268 PBPRB1863 hypothetical multidrug transport proteinchromosome 2 CDS2042512 1539 + 0.434698
Z0458 PBPRB0179 putative ATP-binding component of ABC transporterchromosome 2 CDS199973 1050 + 0.421905