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2024-05-19 07:52:54

Gene list

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COG category: Amino acid transport and metabolism
Genomic element: chromosome

Number of genes found: 165

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Lactobacillus acidophilus NCFM, NCFM
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LBA1674 amino acid ABC transporter permease proteinchromosome CDS1694491 648 - 0.327161
NA LBA0911 aminopeptidasechromosome CDS888539 1314 + 0.328767
NA LBA1294 dipeptidasechromosome CDS1271184 1422 - 0.363572
NA LBA0404 hypothetical proteinchromosome CDS378472 759 + 0.320158
NA LBA0164 multidrug resistance proteinchromosome CDS157716 1218 + 0.357964
NA LBA0236 dipeptidasechromosome CDS233171 843 - 0.428232
NA LBA1345 putative oligopeptide ABC transporter substrate bindingproteinchromosome CDS1319728 270 - 0.325926
NA LBA0552 multidrug transporterchromosome CDS539332 1467 + 0.365371
NA LBA0396 oxalyl-CoA decarboxylasechromosome CDS367973 1710 - 0.40117
NA LBA1572 arginasechromosome CDS1565620 873 - 0.309278
NA LBA1115 amino acid permeasechromosome CDS1091689 1371 + 0.334063
NA LBA1089 cystathionine beta-lyasechromosome CDS1067895 258 + 0.352713
NA LBA0943 cationic amino acid transporterchromosome CDS917693 1197 - 0.332498
NA LBA0460 amino acid permeasechromosome CDS444247 1374 - 0.336245
NA LBA1216 pheromone-peptide binding proteinchromosome CDS1191343 1626 - 0.342558
NA LBA1222 branched-chain amino acid permeasechromosome CDS1200259 438 + 0.344749
NA LBA1044 ABC transporterchromosome CDS1030912 675 + 0.328889
NA LBA1135 putative macrolide efflux proteinchromosome CDS1112209 1218 + 0.320197
NA LBA0567 multidrug resistance efflux pumpchromosome CDS552413 1206 - 0.378939
NA LBA1053 membrane proteinchromosome CDS1038262 1194 - 0.378559
NA LBA1424 amino acid permeasechromosome CDS1410894 1497 - 0.366733
NA LBA0253 putative multidrug resistance proteinchromosome CDS247165 261 + 0.37931
NA LBA0753 multi-drug-type permeasechromosome CDS740476 1389 + 0.327574
NA LBA0899 putative transporter proteinchromosome CDS874233 1392 + 0.356322
NA LBA0857 aspartate-semialdehyde dehydrogenasechromosome CDS841052 1059 + 0.356941
NA LBA1087 cysteine synthasechromosome CDS1066782 588 + 0.345238
NA LBA0878 hypothetical proteinchromosome CDS856155 507 + 0.252465
NA LBA0924 putative transporter proteinchromosome CDS900867 333 - 0.333333
NA LBA1446 multidrug resistance proteinchromosome CDS1432036 1473 + 0.39036
NA LBA1003 homocysteine S-methyltransferasechromosome CDS981040 933 + 0.334405
NA LBA0252 multidrug resistance proteinchromosome CDS246763 354 + 0.350282
NA LBA1810 hypothetical proteinchromosome CDS1824509 1197 - 0.345865
NA LBA0262 aa transporterchromosome CDS251738 1593 + 0.349027
NA LBA1429 putative transporter-membrane proteinchromosome CDS1415546 1179 - 0.35369
NA LBA1884 predicted permeasechromosome CDS1896640 921 - 0.368078
NA LBA0045 sugar transporterchromosome CDS40163 1353 + 0.351072
NA LBA0044 putative esterasechromosome CDS39161 573 + 0.314136
NA LBA0111 putative glutamate ATP binding proteinchromosome CDS107525 756 - 0.376984
NA LBA1786 hypothetical proteinchromosome CDS1810966 423 - 0.373522
NA LBA0430 xaa-pro dipeptidasechromosome CDS404158 1107 - 0.376694
NA LBA0131 ribose-p pyrokinasechromosome CDS124218 987 + 0.378926
NA LBA0696 amino acid permeasechromosome CDS689816 1437 - 0.361865
NA LBA0112 putative glutamine ABC transporterchromosome CDS108280 1614 - 0.363073
NA LBA1281 putative acyl-CoA thioesterasechromosome CDS1260047 759 - 0.309618
NA LBA1887 predicted permeasechromosome CDS1898549 903 - 0.3732
NA LBA1150 carbamoyl-phosphate synthase small subunitchromosome CDS1126126 1056 - 0.325758
NA LBA1695 aspartate aminotransferasechromosome CDS1715789 1599 + 0.332083
NA LBA1837 cytosol non-specific dipeptidasechromosome CDS1849264 1413 + 0.372258
NA LBA1292 aa transporterchromosome CDS1269220 1428 + 0.392857
NA LBA0543 hypothetical proteinchromosome CDS532593 543 + 0.355433
NA LBA0173 putative membrane proteinchromosome CDS168378 1122 - 0.28164
NA LBA1902 amino acid permeasechromosome CDS1910476 1392 - 0.371408
NA LBA1042 glutamine ABC transporter membrane spanning permeasechromosome CDS1030272 660 + 0.35303
NA LBA0039 hypothetical proteinchromosome CDS34699 525 - 0.318095
NA LBA0566 multidrug transporterchromosome CDS550975 1416 + 0.385593
NA LBA1116 pyrroline-5-carboxylate reductasechromosome CDS1093464 276 - 0.391304
NA LBA1853 multidrug resistance efflux pumpchromosome CDS1864533 570 + 0.391228
NA LBA1621 multidrug transporterchromosome CDS1623774 1458 - 0.341564
NA LBA1062 putative multidrug efflux permeasechromosome CDS1044707 522 + 0.254789
NA LBA0743 plp-dependent aminotransferasechromosome CDS730077 906 + 0.345475
NA LBA1765 hypothetical proteinchromosome CDS1796197 282 + 0.351064
NA LBA0850 aspartokinase-homoserinedehydrogenasechromosome CDS833122 1356 - 0.324484
NA LBA1061 putative phosphate transporter related proteinchromosome CDS1044028 597 + 0.313233
NA LBA1672 amino acid ABC transporterchromosome CDS1693035 819 - 0.324786
NA LBA1698 putative prophage related proteinchromosome CDS1720222 1065 - 0.338028
NA LBA0856 aspartate aminotransferasechromosome CDS839877 1176 + 0.348639
NA LBA1212 homoserine dehydrogenase Hdhchromosome CDS1186755 1233 - 0.334955
NA LBA0251 multidrug resistance proteinchromosome CDS246043 561 + 0.392157
NA LBA0615 amino acid permeasechromosome CDS601984 1305 - 0.338697
NA LBA0343 aminopeptidase Cchromosome CDS324213 1350 - 0.375556
NA LBA0744 plp-dependent aminotransferasechromosome CDS730955 204 + 0.29902
NA LBA0996 ornithine decarboxylase chain Achromosome CDS970080 2094 + 0.37106
NA LBA1854 multidrug resistance efflux pumpchromosome CDS1865102 675 + 0.38963
NA LBA0937 aromatic amino acid transferasechromosome CDS912082 1185 - 0.345992
NA LBA0854 dihydrodipicolinate synthasechromosome CDS838154 936 + 0.353632
NA LBA0471 hypothetical proteinchromosome CDS460761 405 + 0.316049
NA LBA1045 glutamine ABC transporter ATP-binding proteinchromosome CDS1031595 741 + 0.364372
NA LBA0035 cytosol non-specific dipeptidasechromosome CDS30348 1401 + 0.390435
NA LBA1046 glutamine ABC transporter substrate-binding proteinchromosome CDS1032349 861 + 0.343786
NA LBA1567 aminopeptidasechromosome CDS1559971 1518 + 0.346509
NA LBA0242 hypothetical proteinchromosome CDS237782 771 - 0.380026
NA LBA1809 hypothetical proteinchromosome CDS1823731 792 - 0.333333
NA LBA0235 dipeptidasechromosome CDS232590 585 - 0.415385
NA LBA1646 dipeptidasechromosome CDS1666543 1428 - 0.379552
NA LBA1036 putative branched-chain amino acid transporterchromosome CDS1025439 1371 + 0.388038
NA LBA1022 arginasechromosome CDS1014419 864 + 0.31713
NA LBA1790 hypothetical proteinchromosome CDS1812517 183 - 0.360656
NA LBA1086 amino acid permeasechromosome CDS1064917 1326 - 0.344646
NA LBA1215 aspartokinasechromosome CDS1189610 1362 + 0.34141
NA LBA1471 putative multidrug efflux permeasechromosome CDS1455574 1224 - 0.321895
NA LBA1177 iron-sulfur cofactor synthesis proteinchromosome CDS1157836 1152 - 0.362847
NA LBA1114 alcohol dehydrogenasechromosome CDS1090777 450 + 0.404444
NA LBA1088 cysteine synthasechromosome CDS1067603 111 + 0.351351
NA LBA0995 amino acid permeasechromosome CDS968370 1473 - 0.367278
NA LBA1670 arylesterasechromosome CDS1692023 561 + 0.340463
NA LBA1238 cysteine synthasechromosome CDS1213642 930 + 0.37957
NA LBA1885 predicted permeasechromosome CDS1897541 930 - 0.368817
NA LBA1224 branched-chain amino acid ABC transporterchromosome CDS1200741 879 + 0.332196
NA LBA1149 carbamoyl-phosphate synthase large subunitchromosome CDS1122937 3186 - 0.318267
NA LBA0729 amino acid permeasechromosome CDS718756 1626 - 0.370234
aapA LBA1905 amino acid permeasechromosome CDS1914245 1350 - 0.345185
ansA LBA1687 l-asparaginasechromosome CDS1708202 993 - 0.376636
asnA LBA1896 aspartate-ammonia ligasechromosome CDS1906426 1011 + 0.373887
asnH LBA0158 asn synthetasechromosome CDS149468 1950 + 0.371795
carA LBA1380 carbamoyl-phosphate synthase, small subunitchromosome CDS1359389 1086 - 0.38582
carB LBA1379 carbamoyl-phosphate synthase, large subunit (glutamine-hydrolyzing)chromosome CDS1356208 3189 - 0.389777
dapB LBA0855 dihydrodipicolinate reductasechromosome CDS839076 786 + 0.352417
dapD LBA0852 tetrahydrodipicolinate succinylasechromosome CDS836284 711 + 0.345992
dapF LBA0849 diaminopimelate epimerasechromosome CDS832106 1005 - 0.333333
dtpT LBA1848 di-tripeptide transporterchromosome CDS1858544 1494 - 0.388889
gadC LBA0057 glutamategamma-aminobutyrate antiporterchromosome CDS52583 1443 + 0.359667
glnA LBA1501 glutamine synthetasechromosome CDS1491502 1338 - 0.390882
glnH LBA0572 glutamine ABC transporterchromosome CDS558435 819 - 0.351648
glnH LBA0579 glutamine-binding protein precursorchromosome CDS566232 819 + 0.357753
glnM LBA0581 glutamine ABC transporter permeasechromosome CDS567050 642 + 0.366044
glnP LBA0582 glutamine ABC transporter (membrane protein)chromosome CDS567706 657 + 0.366819
glnP LBA0134 glutamine ABC transporter permease proteinchromosome CDS127010 1476 + 0.349593
glnQ LBA0578 glutamine ABC transporter ATP-binding proteinchromosome CDS565478 741 + 0.34278
glnQ LBA1673 glutamine ABC transporterchromosome CDS1693857 621 - 0.347826
glnQ LBA0135 glutamine ABC transporter ATP-binding proteinchromosome CDS128478 738 + 0.367209
glyA LBA0261 serine hydroxymethyltransferasechromosome CDS250411 1236 + 0.381877
ilvE LBA1341 branched-chain amino acid aminotransferasechromosome CDS1317137 1026 + 0.358674
lmrB LBA1494 lincomycin-resistance proteinchromosome CDS1482356 1410 - 0.370213
lysA LBA0851 diaminopimelate decarboxylasechromosome CDS834956 1308 + 0.357034
metA LBA1237 homoserine O-succinyltransferasechromosome CDS1212841 789 + 0.325729
metC LBA1090 cystathionine beta-lyasechromosome CDS1068234 807 + 0.33829
metK LBA1080 putative methionine synthasechromosome CDS1060640 1119 + 0.380697
nifS LBA0789 aminotransferasechromosome CDS771825 1161 + 0.36348
oppA LBA1400 oligopeptide ABC trasporter substrate binding proteinchromosome CDS1390333 1746 - 0.363688
oppA LBA0198 peptide binding proteinchromosome CDS192993 1629 + 0.356661
oppA LBA1665 oligopeptide ABC transporter substrate binding proteinchromosome CDS1687265 1641 - 0.361974
oppA LBA1301 oligopeptide ABC trasporter substrate binding proteinchromosome CDS1281751 1770 - 0.378531
oppA LBA1300 oligopeptide ABC trasporter substrate binding proteinchromosome CDS1279792 1758 - 0.359499
oppA LBA1961 oligopeptide ABC transporter substrate binding proteinchromosome CDS1974133 1629 + 0.367096
oppA LBA0197 oligopeptide binding proteinchromosome CDS191288 1626 + 0.376384
oppA LBA1958 oligopeptide ABC transporter substrate binding proteinchromosome CDS1970272 1626 + 0.357319
oppA LBA1347 peptide binding proteinchromosome CDS1320687 555 - 0.353153
oppA LBA1346 oligopeptide ABC transporter substrate binding proteinchromosome CDS1319991 372 - 0.319892
oppB LBA0200 permease proteinchromosome CDS196073 930 + 0.387097
oppB LBA1303 oligopeptide transport proteinchromosome CDS1284676 960 - 0.360417
oppC LBA0201 permease protein ( oligopeptide ABC transporter)chromosome CDS197010 1032 + 0.381783
oppC LBA1302 oligopeptide ABC transporter permease proteinchromosome CDS1283732 930 - 0.35914
oppD LBA1306 oligopeptide ABC transporter ATP-binding proteinchromosome CDS1286628 1032 - 0.379845
oppD LBA0202 ATP binding proteinchromosome CDS198057 1059 + 0.375826
oppF LBA0203 ATP binding protein ( oligopeptide ABC transporter )chromosome CDS199136 945 + 0.378836
oppF LBA1305 oligopeptide ABC transporter (ATP-binding protein)chromosome CDS1285638 987 - 0.368794
pepD LBA0994 aminoacyl-histidine dipeptidasechromosome CDS966847 1404 - 0.367521
pepE LBA0204 aminopeptidase Echromosome CDS200133 1317 - 0.389522
pepF LBA1763 oligopeptidasechromosome CDS1794324 1797 + 0.378408
pepG LBA0195 aminopeptidase Gchromosome CDS189152 1314 + 0.355403
pepN LBA1849 aminopeptidase Nchromosome CDS1860149 2535 - 0.386193
pepP LBA1336 X-Pro dipeptidasechromosome CDS1312689 1110 - 0.357658
pepT LBA1190 amino tripeptidase Tchromosome CDS1167016 1248 - 0.357372
pepT LBA1515 peptidase Tchromosome CDS1509398 1284 - 0.352025
potA LBA0709 spermidine and putrescine ABC transporter ATP-binding proteinchromosome CDS701708 1098 + 0.342441
potB LBA0711 spermidine-putrescine ABC transporter permease proteinchromosome CDS702795 813 + 0.305043
potC LBA0712 spermidine and putrescine ABC transporter permease proteinchromosome CDS703604 816 + 0.324755
potD LBA0713 spermidine and putrescine periplasmatic ABC transporterchromosome CDS704416 1074 + 0.309125
poxB LBA1974 pyruvate oxidasechromosome CDS1986109 1806 - 0.400886
prsA LBA0224 ribose-p-pyrophosphokinasechromosome CDS220709 975 + 0.388718
sdhA LBA1398 L-serine dehydratase, alpha subunitchromosome CDS1388814 882 + 0.441043
sdhB LBA1397 L-serine dehydratase, beta subunitchromosome CDS1388138 663 + 0.377074
thrB LBA1211 homoserine kinasechromosome CDS1185867 864 - 0.387731
thrC LBA1214 threonine synthasechromosome CDS1188103 1491 + 0.337357
yifK LBA1904 amino acid permeasechromosome CDS1912828 1374 - 0.355167