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2024-05-15 02:34:39

Gene list

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COG category: Amino acid transport and metabolism
Genomic element: chromosome II

Number of genes found: 144

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Vibrio vulnificus YJ016, YJ016
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VVA0003 ABC-type oligopeptide transport system, ATPase componentchromosome II CDS2983 933 - 0.489818
VVA0004 peptide ABC transporter, ATP-binding proteinchromosome II CDS3918 846 - 0.497636
VVA0007 hypothetical proteinchromosome II CDS6605 756 - 0.449735
VVA0011 hypothetical proteinchromosome II CDS10627 246 - 0.487805
VVA0024 sodium/glutamate symporterchromosome II CDS22128 1227 + 0.479218
VVA0026 sodium/glutamate symporterchromosome II CDS23815 1227 + 0.471068
VVA0063 ornithine decarboxylase, induciblechromosome II CDS67248 2181 + 0.480055
VVA0064 amino acid transporterchromosome II CDS69494 1311 + 0.506484
VVA0066 sodium/dicarboxylate symporterchromosome II CDS72095 1221 - 0.502047
VVA0082 putative threonine efflux proteinchromosome II CDS93596 588 - 0.503401
VVA0090 phosphoserine phosphatasechromosome II CDS102278 678 - 0.514749
VVA0102 conserved hypothetical proteinchromosome II CDS118164 1296 - 0.482253
VVA0103 conserved hypothetical proteinchromosome II CDS119798 1542 + 0.455253
VVA0104 L-serine deaminasechromosome II CDS121351 1371 + 0.4814
VVA0105 hypothetical proteinchromosome II CDS122815 612 - 0.45915
VVA0111 hypothetical proteinchromosome II CDS127795 813 + 0.506765
VVA0131 conserved hypothetical proteinchromosome II CDS146852 900 - 0.512222
VVA0132 ABC-type dipeptide transport system, periplasmic componentchromosome II CDS148106 1641 + 0.486289
VVA0133 peptide ABC transporter, permease proteinchromosome II CDS149814 975 + 0.521026
VVA0134 peptide ABC transporter, permease proteinchromosome II CDS150797 993 + 0.526687
VVA0135 peptide ABC transporter, ATP-binding proteinchromosome II CDS151786 954 + 0.527254
VVA0136 ABC-type oligopeptide transport system, ATPase componentchromosome II CDS152724 1014 + 0.535503
VVA0149 hypothetical proteinchromosome II CDS171279 1092 + 0.510073
VVA0193 conserved hypothetical proteinchromosome II CDS221504 339 + 0.501475
VVA0194 putative transcriptional regulatorchromosome II CDS221201 384 - 0.515625
VVA0198 phosphoserine phosphatasechromosome II CDS224152 720 - 0.494444
VVA0208 conserved hypothetical proteinchromosome II CDS238726 1317 - 0.480638
VVA0216 conserved hypothetical proteinchromosome II CDS249575 1107 - 0.495935
VVA0218 argininosuccinate synthasechromosome II CDS251246 1215 - 0.482305
VVA0236 putative peptidasechromosome II CDS272295 1848 - 0.492424
VVA0237 putative transcriptional regulatorchromosome II CDS274274 1434 - 0.509763
VVA0238 conserved hypothetical proteinchromosome II CDS275795 906 + 0.523179
VVA0241 conserved hypothetical proteinchromosome II CDS278337 786 + 0.479644
VVA0255 hypothetical proteinchromosome II CDS294105 351 - 0.45584
VVA0273 permeasechromosome II CDS312928 1206 + 0.464345
VVA0275 putative permeasechromosome II CDS314938 888 + 0.477477
VVA0277 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding proteinchromosome II CDS317126 1083 + 0.44506
VVA0285 conserved hypothetical proteinchromosome II CDS326116 939 + 0.470714
VVA0289 histidinol phosphatasechromosome II CDS330652 750 + 0.509333
VVA0297 lactoylglutathione lyasechromosome II CDS337075 387 - 0.503876
VVA0300 permeasechromosome II CDS338690 1242 + 0.500805
VVA0305 threonine dehydrogenasechromosome II CDS345659 1032 + 0.500969
VVA0310 hypothetical proteinchromosome II CDS348674 411 - 0.418491
VVA0345 hypothetical proteinchromosome II CDS402431 1182 + 0.483926
VVA0361 protease IIchromosome II CDS420924 2055 + 0.498783
VVA0402 putative membrane proteinchromosome II CDS472473 909 - 0.492849
VVA0446 spermidine synthasechromosome II CDS511893 903 - 0.460687
VVA0472 putative transcriptional regulatorchromosome II CDS536418 1251 - 0.498002
VVA0475 4-aminobutyrate aminotransferasechromosome II CDS539534 1380 - 0.507971
VVA0476 2-aminoethylphosphonate:pyruvateaminotransferasechromosome II CDS540940 1116 - 0.476703
VVA0478 ABC-type spermidine/putrescine transport system, ATPase componentchromosome II CDS544265 1116 + 0.5
VVA0481 conserved hypothetical proteinchromosome II CDS547947 903 + 0.492802
VVA0482 conserved hypothetical proteinchromosome II CDS548967 1473 + 0.506449
VVA0489 permeasechromosome II CDS555506 1644 - 0.479927
VVA0490 permeasechromosome II CDS557224 1623 - 0.505853
VVA0494 putative transport proteinchromosome II CDS561477 1485 - 0.480808
VVA0496 L-serine deaminasechromosome II CDS563330 1371 - 0.488694
VVA0508 choline dehydrogenasechromosome II CDS576182 1683 + 0.503268
VVA0509 ABC-type proline/glycine betaine transport system, periplasmic componentchromosome II CDS577921 939 + 0.485623
VVA0510 ABC-type proline/glycine betaine transport system, permease componentchromosome II CDS578915 843 + 0.479241
VVA0511 ABC-type proline/glycine betaine transport system, ATPase componentchromosome II CDS579760 1194 + 0.478224
VVA0520 anaerobic glycerol-3-phosphate dehydrogenasechromosome II CDS591254 1317 + 0.501898
VVA0523 threonine aldolasechromosome II CDS594612 1077 + 0.502321
VVA0537 Zinc metalloproteasechromosome II CDS610978 1827 - 0.497537
VVA0544 amino acid permeasechromosome II CDS615796 1254 - 0.478469
VVA0550 glutamate decarboxylasechromosome II CDS621119 1680 + 0.472024
VVA0561 threonine aldolasechromosome II CDS632688 1008 - 0.491071
VVA0567 putative threonine efflux proteinchromosome II CDS638604 639 - 0.475743
VVA0675 permeasechromosome II CDS764712 1266 - 0.487362
VVA0679 permeasechromosome II CDS767746 1488 - 0.495968
VVA0691 glycine cleavage system protein Pchromosome II CDS781730 2865 - 0.518325
VVA0692 glycine cleavage system H proteinchromosome II CDS784699 381 - 0.467192
VVA0693 serine hydroxymethyltransferasechromosome II CDS785122 1317 - 0.494305
VVA0696 glycine cleavage system T proteinchromosome II CDS787703 1146 + 0.50349
VVA0710 conserved hypothetical proteinchromosome II CDS803444 813 - 0.472325
VVA0746 conserved hypothetical proteinchromosome II CDS845967 897 + 0.473802
VVA0748 hypothetical proteinchromosome II CDS848115 144 + 0.458333
VVA0773 lysophospholipase L1chromosome II CDS869673 696 - 0.439655
VVA0776 allophanate hydrolase subunit 2chromosome II CDS875173 936 - 0.463675
VVA0777 allophanate hydrolase subunit 1chromosome II CDS876105 684 - 0.422515
VVA0820 putative transmembrane proteinchromosome II CDS912682 915 + 0.44918
VVA0852 hypothetical proteinchromosome II CDS952434 321 - 0.46729
VVA0882 predicted phosphohydrolasechromosome II CDS972320 576 + 0.486111
VVA0892 amino acid biosynthesis aminotransferasechromosome II CDS977797 1197 - 0.461988
VVA0908 permeasechromosome II CDS998620 1155 + 0.475325
VVA0938 conserved hypothetical proteinchromosome II CDS1032332 885 + 0.445198
VVA0954 anthranilate phosphoribosyltransferasechromosome II CDS1053502 966 - 0.517598
VVA1005 phenylalanine-4-hydroxylasechromosome II CDS1117522 795 - 0.447799
VVA1010 putative permeasechromosome II CDS1123356 897 - 0.474916
VVA1038 3-hydroxyisobutyrate dehydrogenasechromosome II CDS1166498 1071 - 0.529412
VVA1049 putative hydroxymethylglutaryl-CoA lyasechromosome II CDS1177796 918 + 0.504357
VVA1065 GGDEF family proteinchromosome II CDS1193650 1374 - 0.455604
VVA1081 di-and tripeptidasechromosome II CDS1209052 1254 - 0.471292
VVA1106 3-deoxy-D-arabino-heptulosonate 7-phosphate synthasechromosome II CDS1235701 1053 - 0.473884
VVA1119 putative threonine efflux proteinchromosome II CDS1248795 633 - 0.454976
VVA1121 predicted branched-chain amino acid permeasechromosome II CDS1250546 726 + 0.517906
VVA1132 putative transporter, DME familychromosome II CDS1259068 879 + 0.505119
VVA1136 permeasechromosome II CDS1261409 1194 - 0.485762
VVA1143 putative Na+/proline symporterchromosome II CDS1269824 1518 - 0.509881
VVA1146 predicted amino acid aldolase or racemasechromosome II CDS1273615 1266 + 0.526066
VVA1157 lactoylglutathione lyasechromosome II CDS1283433 420 - 0.492857
VVA1199 putative N-acetylneuraminate lyasechromosome II CDS1319662 900 - 0.494444
VVA1218 hypothetical proteinchromosome II CDS1339292 975 + 0.478974
VVA1237 putative threonine efflux proteinchromosome II CDS1359119 648 - 0.492284
VVA1242 amino acid transporterchromosome II CDS1361440 1254 + 0.501595
VVA1245 putative transcriptional regulatorchromosome II CDS1363481 1476 - 0.523713
VVA1250 hypothetical proteinchromosome II CDS1370180 336 + 0.5
VVA1259 serine proteasechromosome II CDS1382782 2037 - 0.490918
VVA1279 ABC-type arginine transport system, ATPase componentchromosome II CDS1410061 744 + 0.473118
VVA1280 arginine ABC transporter, periplasmic arginine-binding proteinchromosome II CDS1410928 732 + 0.461749
VVA1282 ABC-type arginine transport system, permease componentchromosome II CDS1411661 690 + 0.505797
VVA1283 arginine ABC transporter, permease proteinchromosome II CDS1412347 669 + 0.499253
VVA1289 conserved hypothetical proteinchromosome II CDS1421670 768 - 0.447917
VVA1291 putative amino acid ABC transporter, periplasmic amino acid-binding proteinchromosome II CDS1424439 729 + 0.443073
VVA1298 3-deoxy-D-arabino-heptulosonate 7-phosphate synthasechromosome II CDS1436570 1071 + 0.497666
VVA1305 chorismate mutasechromosome II CDS1443982 330 - 0.478788
VVA1325 tryptophanasechromosome II CDS1468817 1422 + 0.500703
VVA1326 amino acid permeasechromosome II CDS1470336 1215 + 0.490535
VVA1365 conserved hypothetical proteinchromosome II CDS1511601 786 + 0.478372
VVA1372 putative carboxypeptidase G2chromosome II CDS1517504 1125 - 0.542222
VVA1379 putative transporter proteinchromosome II CDS1524286 1773 - 0.500282
VVA1382 hypothetical proteinchromosome II CDS1529450 1731 + 0.51762
VVA1389 conserved hypothetical proteinchromosome II CDS1539125 915 + 0.515847
VVA1400 putative membrane proteinchromosome II CDS1552124 513 - 0.461988
VVA1426 conserved hypothetical proteinchromosome II CDS1580722 1224 + 0.504085
VVA1428 ABC-type branched-chain amino acid transport system, periplasmic componentchromosome II CDS1582485 1164 + 0.492268
VVA1442 multidrug resistance protein Dchromosome II CDS1593140 1158 + 0.507772
VVA1443 hypothetical proteinchromosome II CDS1594503 1053 + 0.333333
VVA1444 conserved hypothetical proteinchromosome II CDS1595712 897 + 0.500557
VVA1448 putative transmembrane proteinchromosome II CDS1598289 864 + 0.496528
VVA1463 hypothetical proteinchromosome II CDS1608229 903 - 0.500554
VVA1465 Zinc metalloprotease, vibriolysinchromosome II CDS1609889 1911 - 0.499215
VVA1466 phosphoglycerate dehydrogenasechromosome II CDS1612067 987 + 0.52077
VVA1489 conserved hypothetical proteinchromosome II CDS1638527 1008 + 0.507937
VVA1491 methionine synthase IIchromosome II CDS1639659 1035 - 0.531401
VVA1521 conserved hypothetical proteinchromosome II CDS1669875 1029 - 0.503401
VVA1524 diaminopimelate decarboxylasechromosome II CDS1671803 1236 - 0.485437
VVA1581 putative dihydroxy-acid dehydratasechromosome II CDS1725037 1689 + 0.487271
VVA1582 putative dihydrodipicolinate synthasechromosome II CDS1726722 906 + 0.427152
VVA1586 hypothetical proteinchromosome II CDS1729685 111 + 0.459459
VVA1627 oligopeptide ABC transporter, permease proteinchromosome II CDS1774214 1161 - 0.507321
VVA1628 oligopeptide ABC transporter, permease proteinchromosome II CDS1775377 1008 - 0.49504
VVA1630 ABC-type dipeptide transport system, periplasmic componentchromosome II CDS1777338 1920 - 0.495833
VVA1642 sodium/proline symporterchromosome II CDS1792448 1494 - 0.508032