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2024-05-20 04:02:53

Gene list

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COG category: Amino acid transport and metabolism
Genomic element: p42f

Number of genes found: 71

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Rhizobium etli CFN 42, CFN 42
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RHE_PF00488 hypothetical conserved proteinp42f CDS551726 630 - 0.588889
NA RHE_PF00191 probable amino acid ABC transporter, permease proteinp42f CDS200846 846 - 0.596927
NA RHE_PF00164 probable amino acid ABC transporter, ATP-binding proteinp42f CDS172763 771 - 0.608301
NA RHE_PF00159 probable amino acid ABC transporter, ATP-binding proteinp42f CDS168681 756 - 0.603175
NA RHE_PF00161 probable amino acid ABC transporter, permease proteinp42f CDS170070 672 - 0.595238
NA RHE_PF00165 probable amino acid ABC transporter, permease proteinp42f CDS173545 660 - 0.610606
NA RHE_PF00393 probable glycine betaine/L-proline ABC transporter, permease proteinp42f CDS445449 849 - 0.616019
NA RHE_PF00351 probable oligopeptide ABC transporter, substrate-binding proteinp42f CDS393259 1611 + 0.590317
NA RHE_PF00192 probable amino acid ABC transporter, substrate-binding proteinp42f CDS201882 834 - 0.59952
NA RHE_PF00233 probable oligopeptide ABC transporter, permease proteinp42f CDS247383 1002 - 0.58483
NA RHE_PF00187 probable amino acid ABC transporter, ATP-binding proteinp42f CDS197043 786 - 0.618321
NA RHE_PF00245 probable multidrug ABC transporter, permease proteinp42f CDS261023 858 + 0.618881
NA RHE_PF00273 probable aspartate aminotransferase proteinp42f CDS296366 1197 + 0.614035
NA RHE_PF00336 putative D-2-hydroxyacid dehydrogenase proteinp42f CDS377157 924 + 0.646104
NA RHE_PF00186 probable amino acid ABC transporter, substrate-binding proteinp42f CDS196135 849 - 0.625442
NA RHE_PF00341 probable FAD-dependent oxidoreductase proteinp42f CDS382830 1275 - 0.622745
NA RHE_PF00234 probable oligopeptide ABC transporter, substrate-binding proteinp42f CDS248486 1938 - 0.604747
NA RHE_PF00085 hypothetical conserved proteinp42f CDS86242 822 - 0.631387
NA RHE_PF00443 putative dehydrogenase large subunit proteinp42f CDS495698 1872 + 0.60203
NA RHE_PF00185 probable amino acid ABC transporter, permease proteinp42f CDS195399 660 - 0.651515
NA RHE_PF00550 hypothetical conserved proteinp42f CDS614771 1599 - 0.60788
NA RHE_PF00232 probable oligopeptide ABC transporter, permease proteinp42f CDS246252 1122 - 0.604278
NA RHE_PF00028 putative transporter, permease proteinp42f CDS28479 888 + 0.627252
NA RHE_PF00190 probable amino acid ABC transporter, ATP-binding proteinp42f CDS200106 744 - 0.579301
NA RHE_PF00356 putative D-amino acid oxidase proteinp42f CDS399674 1323 + 0.631141
NA RHE_PF00167 probable amino acid ABC transporter, substrate-binding proteinp42f CDS175037 840 - 0.605952
NA RHE_PF00339 probable tartrate dehydrogenase proteinp42f CDS380126 1044 + 0.623563
NA RHE_PF00253 probable D-amino acid oxidase proteinp42f CDS270224 1134 - 0.632275
NA RHE_PF00369 probable proline dipeptidase protein, M24 familyp42f CDS416971 1191 - 0.61377
NA RHE_PF00430 probable pyrroline-5-carboxylate reductase proteinp42f CDS482866 783 + 0.64751
NA RHE_PF00166 probable amino acid ABC transporter, permease proteinp42f CDS174210 663 - 0.603318
NA RHE_PF00184 probable amino acid ABC transporter, permease proteinp42f CDS194735 627 - 0.606061
NA RHE_PF00160 probable amino acid ABC transporter, permease proteinp42f CDS169414 660 - 0.592424
NA RHE_PF00162 probable amino acid ABC transporter, substrate-binding proteinp42f CDS170818 786 - 0.615776
NA RHE_PF00182 probable threonine dehydratase proteinp42f CDS192948 1002 - 0.663673
NA RHE_PF00410 probable amino acid ABC transporter, substrate-binding proteinp42f CDS462800 1002 + 0.607784
NA RHE_PF00409 putative pyrroline-5-carboxylate reductase proteinp42f CDS461937 795 + 0.627673
NA RHE_PF00361 probable deaminase proteinp42f CDS406557 1326 + 0.656863
NA RHE_PF00353 probable oligopeptide ABC transporter, permease proteinp42f CDS395906 855 + 0.6
NA RHE_PF00180 probable peptidase proteinp42f CDS190745 1182 - 0.622673
NA RHE_PF00521 hypothetical conserved proteinp42f CDS586813 1350 + 0.64963
NA RHE_PF00395 probable glycine betaine/L-proline ABC transporter, substrate-binding proteinp42f CDS447496 852 - 0.583333
NA RHE_PF00394 probable glycine betaine/L-proline ABC transporter, ATP-binding proteinp42f CDS446320 1092 - 0.613553
NA RHE_PF00531 hypothetical conserved proteinp42f CDS595596 591 + 0.575296
NA RHE_PF00391 probable proline racemase proteinp42f CDS443586 999 - 0.61962
NA RHE_PF00411 probable amino acid ABC transporter, permease proteinp42f CDS463894 888 + 0.588964
NA RHE_PF00545 hypothetical conserved proteinp42f CDS609618 669 + 0.624813
NA RHE_PF00071 probable zinc-dependent alcohol dehydrogenase proteinp42f CDS71035 1035 + 0.655072
NA RHE_PF00412 probable amino acid ABC transporter, ATP-binding proteinp42f CDS464774 1080 + 0.617593
NA RHE_PF00188 putative transcriptional regulator protein, GntR familyp42f CDS197951 1386 - 0.651515
NA RHE_PF00392 probable glycine betaine/L-proline ABC transporter, permease proteinp42f CDS444601 852 - 0.647887
NA RHE_PF00396 putative oxidoreductase proteinp42f CDS448426 1347 - 0.64291
NA RHE_PF00379 putative phosphoglycerate dehydrogenase proteinp42f CDS427557 975 - 0.649231
NA RHE_PF00352 probable oligopeptide ABC transporter, permease proteinp42f CDS394959 951 + 0.573081
argE RHE_PF00335 acetylornithine deacetylase proteinp42f CDS376008 1125 + 0.652444
dadA RHE_PF00436 D-amino-acid dehydrogenase, small subunit proteinp42f CDS488844 1269 - 0.62963
dapAf1 RHE_PF00094 dihydrodipicolinate synthase proteinp42f CDS95643 891 + 0.619529
dapAf2 RHE_PF00238 dihydrodipicolinate synthase proteinp42f CDS253248 951 + 0.661409
dapAf3 RHE_PF00398 dihydrodipicolinate synthase proteinp42f CDS451279 912 - 0.616228
dppAf RHE_PF00239 dipeptide ABC transporter, substrate-binding proteinp42f CDS254262 1587 + 0.614997
dppBf RHE_PF00240 dipeptide ABC transporter, permease proteinp42f CDS255854 1080 + 0.62963
dppCf RHE_PF00241 dipeptide ABC transporter, permease proteinp42f CDS256938 936 + 0.642094
dppDf RHE_PF00242 dipeptide ABC transporter, ATP-binding proteinp42f CDS257870 858 + 0.622378
dppFf RHE_PF00243 dipeptide ABC transporter, ATP-binding proteinp42f CDS258724 744 + 0.657258
glnH RHE_PF00255 glutamine ABC transporter, substrate binding proteinp42f CDS273042 828 - 0.597826
glnP/glnQ RHE_PF00254 glutamine ABC transporter, ATP-binding proteinp42f CDS271422 1542 - 0.629702
ilvB RHE_PF00274 acetolactate synthase, large subunit protein (thiamine pyrophosphate-dependent enzyme)p42f CDS297588 1626 + 0.615621
mdeAf RHE_PF00019 cystathionine gamma-synthase proteinp42f CDS18139 1284 - 0.636293
ocdf RHE_PF00181 ornithine cyclodeaminase proteinp42f CDS191959 993 - 0.650554
ooxB RHE_PF00357 D-Octopine oxidase, subunit B proteinp42f CDS400914 1263 + 0.634204
vbsL RHE_PF00461 cystathionine gamma-synthase proteinp42f CDS520689 1188 + 0.646465