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2024-05-19 17:47:57

Gene list

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COG category: Amino acid transport and metabolism
Genomic element: chromosome

Number of genes found: 200

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Idiomarina loihiensis L2TR, L2TR
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA IL1358 Histidinol-phosphate/aromatic aminotransferasechromosome CDS1457668 1104 - 0.450181
NA IL2152 Multidomain protein, contains Na+/proline symporter PutP-like domain, sensory histidine kinase and receiver domainchromosome CDS2288668 3348 + 0.448925
NA IL1416 Predicted carboxypeptidase, Zn-dependentchromosome CDS1523274 1170 + 0.440171
NA IL1268 Na(+)-linked D-alanine and glycine permeasechromosome CDS1358438 1677 + 0.44842
NA IL2578 Glutamate synthase, putativechromosome CDS2769367 1512 - 0.503307
NA IL0052 Predicted permeasechromosome CDS54263 849 - 0.429918
NA IL1230 Amino acid transporterchromosome CDS1325569 1311 - 0.46148
NA IL2157 Homoserine acetyltransferasechromosome CDS2298102 1179 + 0.477523
NA IL2317 Arginine N-succinyltransferasechromosome CDS2481897 1023 - 0.467253
NA IL2539 Threonine aldolase putativechromosome CDS2721966 1107 + 0.495935
NA IL2013 Homoserine acetyltransferasechromosome CDS2156762 909 + 0.504951
NA IL1761 Predicted amino acid aldolase or racemasechromosome CDS1895094 1128 + 0.474291
NA IL2155 GntP family permeasechromosome CDS2295161 1293 + 0.506574
NA IL0940 Predicted permease, DMT superfamilychromosome CDS994404 870 + 0.474713
NA IL1591 Glyoxalase/dioxygenase superfamily proteinchromosome CDS1704481 381 + 0.48294
NA IL1528 Na+/proline symporterchromosome CDS1642913 1437 - 0.481559
NA IL2127 Permease of the major facilitator superfamilychromosome CDS2265101 1212 + 0.50165
NA IL1022 Protein containing C-terminal DadA-like amino acid oxidase domain fused to N-terminal uncharacterized conserved domainchromosome CDS1093286 1821 + 0.495332
NA IL2480 Transporter, LysE familychromosome CDS2656548 585 - 0.45812
NA IL1999 Carboxynorspermidine dehydrogenasechromosome CDS2136901 1200 + 0.484167
NA IL0722 4-hydroxyphenylpyruvate dioxygenasechromosome CDS779709 1074 - 0.44879
NA IL0718 Dipeptidyl peptidase IVchromosome CDS774402 2484 - 0.471417
NA IL0276 Acylaminoacyl-peptidasechromosome CDS290217 2019 - 0.508668
NA IL0355 Permease of the major facilitator superfamilychromosome CDS371777 1377 + 0.486565
NA IL2239 Xaa-Pro aminopeptidasechromosome CDS2395135 1317 - 0.468489
NA IL0099 Uncharacterized conserved domain often associated with AraC-type DNA-binding domainchromosome CDS102352 399 - 0.47619
NA IL1368 Asparaginase family proteinchromosome CDS1472457 1038 - 0.485549
NA IL2633 Lactoylglutathione lyasechromosome CDS2832838 555 - 0.459459
NA IL0726 Methionine gamma-lyasechromosome CDS783894 1227 - 0.507742
NA IL1404 Predicted membrane proteinchromosome CDS1505855 264 - 0.443182
NA IL0757 Uncharacterized conserved protein containing predicted Zn-ribbon like domainchromosome CDS816043 303 + 0.429043
NA IL0352 Glutaminasechromosome CDS367469 957 - 0.486938
NA IL1750 Carboxypeptidase-related proteinchromosome CDS1883508 1536 + 0.485026
NA IL1480 Allophanate hydrolase subunit 1chromosome CDS1589405 714 - 0.494398
NA IL1676 Predicted permease, DMT superfamilychromosome CDS1794786 801 + 0.460674
NA IL1998 Prolyl endopeptidasechromosome CDS2134672 2157 + 0.460362
NA IL0878 Hydroxymethylglutaryl-CoA lyasechromosome CDS936584 900 + 0.502222
NA IL1314 Leucine dehydrogenasechromosome CDS1411444 1038 + 0.473025
NA IL1412 Predicted permease, DMT superfamilychromosome CDS1515478 873 + 0.482245
NA IL1742 Peptidyl-arginine deiminase related enzymechromosome CDS1875820 1050 - 0.477143
NA IL0599 Cystathionine gamma-synthasechromosome CDS644953 1152 - 0.513021
NA IL2196 Predicted metal-dependent peptidasechromosome CDS2345820 903 - 0.354374
NA IL0039 Acylaminoacyl-peptidasechromosome CDS41079 2040 - 0.496569
NA IL0688 Uncharacterized periplasmic substrate-binding proteinchromosome CDS743401 843 + 0.45433
NA IL2454 Arginase family proteinchromosome CDS2626301 1050 - 0.517143
NA IL0359 Uncharacterized conserved membrane proteinchromosome CDS375489 1029 + 0.490768
NA IL1430 Dipeptide/tripeptide permeasechromosome CDS1540650 1563 + 0.450416
NA IL2408 Permease of the major facilitator superfamilychromosome CDS2583290 1179 + 0.47922
NA IL1431 Xaa-Pro aminopeptidase family enzymechromosome CDS1542279 1317 + 0.453303
NA IL1752 Anthranilate synthase component IIchromosome CDS1886914 636 + 0.511006
NA IL1674 Glyoxalase I family proteinchromosome CDS1793768 414 - 0.490338
NA IL0517 Acylaminoacyl-peptidasechromosome CDS542305 2016 + 0.516369
NA IL2574 N-carbamyl-L-amino acid amidohydrolasechromosome CDS2765783 1233 - 0.484996
NA IL1172 Secreted dipeptidyl aminopeptidasechromosome CDS1249182 1950 - 0.428205
NA IL1470 Permease of the major facilitator superfamilychromosome CDS1579980 1287 + 0.485625
NA IL2014 O-acetylhomoserine sulfhydrylasechromosome CDS2157667 1269 + 0.493302
NA IL1482 Predicted membrane proteinchromosome CDS1590917 405 - 0.48642
NA IL2429 Uncharacterized protein, containing periplasmic binding domainchromosome CDS2602284 1287 + 0.469308
NA IL1509 Lysine 2,3-aminomutase related protein enzymechromosome CDS1618885 1347 + 0.480327
NA IL0725 Phenylalanine-4-hydroxylasechromosome CDS783030 795 - 0.451572
NA IL1926 Zn-dependent dipeptidasechromosome CDS2053244 1221 - 0.452907
NA IL1221 Nitrogen regulatory protein PIIchromosome CDS1312066 339 - 0.448378
NA IL0861 Isocitrate dehydrogenase, NAD-dependentchromosome CDS918675 1005 + 0.468657
NA IL1027 Dipeptidyl peptidase IVchromosome CDS1098854 2232 - 0.451165
NA IL1034 Leucyl aminopeptidasechromosome CDS1109749 1545 + 0.506796
NA IL2328 Dipeptidyl aminopeptidasechromosome CDS2493685 2310 + 0.509957
NA IL1791 Aspartate aminotransferasechromosome CDS1926110 1188 + 0.462121
NA IL2395 Amino acid transporterchromosome CDS2568901 1221 - 0.5086
NA IL0217 L-allo-threonine aldolasechromosome CDS237991 1023 - 0.525904
NA IL0630 Xaa-Pro aminopeptidasechromosome CDS686838 1212 + 0.49505
NA IL2005 Multidomain protein contains Na+/proline symporter PutP-like domain, sensory histidine kinase and receiver domainchromosome CDS2142731 3474 - 0.496834
NA IL0318 Signaling protein with a periplasmic amino acid-binding domain, GGDEF and EAL domainschromosome CDS326293 2553 + 0.446534
NA IL2596 Probable phosphoserine phosphatase, HAD-superfamily hydrolasechromosome CDS2793572 669 + 0.412556
NA IL2179 Kynureninasechromosome CDS2326511 1248 + 0.487179
NA IL0145 Prolyl endopeptidasechromosome CDS153791 2139 + 0.480131
NA IL0776 Predicted membrane proteinchromosome CDS832655 237 - 0.396624
NA IL0802 Uncharacterized conserved membrane proteinchromosome CDS859520 492 + 0.455285
NA IL1267 Predicted carboxypeptidase, Zn dependentchromosome CDS1357264 1128 + 0.450355
NA IL1255 Transporter, LysE familychromosome CDS1345202 645 + 0.423256
NA IL1935 Uncharacterized conserved proteinchromosome CDS2062475 516 - 0.414729
NA IL2534 Transporter, LysE familychromosome CDS2717052 615 + 0.476423
NA IL1479 Allophanate hydrolase subunit 2chromosome CDS1588455 954 - 0.512579
NA IL1681 Succinylglutamate desuccinylasechromosome CDS1800918 1032 - 0.465116
NA IL2191 Predicted permease, DMT superfamilychromosome CDS2341011 927 + 0.498382
NA IL0026 Predicted permeasechromosome CDS30480 834 - 0.483213
NA IL2284 Probably 3-dehydroquinate dehydratase IIchromosome CDS2447925 459 + 0.459695
NA IL2040 Cysteine sulfinate desulfinasechromosome CDS2182320 1158 - 0.488774
NA IL2337 Aminopeptidase M1 family proteinchromosome CDS2504697 1689 - 0.439905
NA IL1279 NAD-specific glutamate dehydrogenasechromosome CDS1370388 4848 + 0.457302
NA IL2000 Carboxynorspermidine decarboxylasechromosome CDS2138116 1134 + 0.505291
NA IL1400 Predicted permease, DMT superfamilychromosome CDS1503042 894 + 0.483221
NA IL2277 Probable lysine 2,3-aminomutasechromosome CDS2441623 1047 + 0.487106
ampG IL1867 MFS family muropeptide transporterchromosome CDS1995493 1344 + 0.462054
ansA IL1330 L-asparaginase Ichromosome CDS1431543 1014 + 0.45858
argB IL0613 Acetylglutamate kinasechromosome CDS666039 732 + 0.513661
argC IL0612 Acetylglutamate semialdehyde dehydrogenasechromosome CDS665017 1026 + 0.502924
argD IL2318 Ornithine/acetylornithine aminotransferasechromosome CDS2482933 1218 - 0.486864
argE IL0611 Acetylornithine deacetylasechromosome CDS663757 1161 - 0.489233
argF IL0614 Ornithine carbamoyltransferasechromosome CDS666773 951 + 0.516299
argG IL0615 Argininosuccinate synthasechromosome CDS667720 1212 + 0.520627
argH IL0616 Argininosuccinate lyasechromosome CDS668935 1863 + 0.531938
aroA IL1357 5-enolpyruvylshikimate-3-phosphate synthasechromosome CDS1456386 1290 - 0.496124
aroB IL2473 3-dehydroquinate synthetasechromosome CDS2649797 1074 + 0.49162
aroC IL0892 Chorismate synthasechromosome CDS950790 1089 - 0.517906
aroE IL0024 Shikimate 5-dehydrogenasechromosome CDS26348 840 + 0.5
aroG IL1319 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthasechromosome CDS1419692 1359 - 0.482708
aroK IL2472 Shikimate kinasechromosome CDS2649245 534 + 0.492509
asd IL1019 Aspartate-semialdehyde dehydrogenasechromosome CDS1089745 1017 - 0.469027
asnA IL0693 Asparagine synthetase Achromosome CDS747103 981 - 0.492355
asnB IL1526 Asparagine synthase (glutamine-hydrolyzing)chromosome CDS1639698 2016 - 0.494544
astB IL1011 Succinylarginine dihydrolasechromosome CDS1080209 1350 + 0.485185
bcr IL1667 Sugar permease, MFS-likechromosome CDS1786028 1203 - 0.498753
betA IL1371 Choline dehydrogenase and related flavoproteinschromosome CDS1475414 1527 + 0.468238
capC IL2401 Capsular polyglutamate biosynthesis membrane protein CapCchromosome CDS2575000 576 + 0.449653
carA IL0981 Carbamoylphosphate synthase small subunitchromosome CDS1037189 1146 - 0.480803
carB IL0980 Carbamoylphosphate synthase large subunitchromosome CDS1033906 3225 - 0.470388
csdA IL0151 Selenocysteine lyase/Cysteine desulfurasechromosome CDS159539 1218 - 0.497537
cysE IL0031 Serine acetyltransferasechromosome CDS34313 828 + 0.495169
cysK IL2163 Cysteine synthasechromosome CDS2304598 1053 - 0.51377
cysM IL0218 Cysteine synthase Bchromosome CDS239142 966 + 0.482402
cysZ IL1703 Uncharacterized protein involved in cysteine biosynthesischromosome CDS1833704 741 + 0.450742
dapA IL1460 Dihydrodipicolinate synthasechromosome CDS1571980 891 - 0.450056
dapB IL0982 Dihydrodipicolinate reductasechromosome CDS1038493 807 - 0.49938
dapD IL0848 Tetrahydrodipicolinate N-succinyltransferasechromosome CDS906202 825 + 0.490909
dapE IL1455 N-succinyl-diaminopimelate deacylasechromosome CDS1568190 1131 + 0.495137
dapF IL2555 Diaminopimelate epimerasechromosome CDS2739467 828 - 0.48913
dcp IL1691 Zn-dependent oligopeptidasechromosome CDS1817618 2190 - 0.454795
dppA IL0733 ABC-type dipeptide transport system, periplasmic componentchromosome CDS790156 1626 + 0.467405
dppB IL0734 ABC-type dipeptide transport systems, permease componentchromosome CDS791778 1029 + 0.457726
fbpC IL1061 ABC-type Fe3+ transport system, ATPase componentchromosome CDS1141128 1059 + 0.484419
gadB IL2256 Glutamate decarboxylase putativechromosome CDS2414194 1650 - 0.489697
gcvH IL2093 Glycine cleavage system H protein (lipoate-binding)chromosome CDS2228411 390 - 0.494872
gcvP_1_2 IL2092 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domainchromosome CDS2225397 2889 - 0.51748
gcvT IL2094 Glycine cleavage system T proteinchromosome CDS2228851 1080 - 0.489815
gdhA IL2338 Glutamate dehydrogenasechromosome CDS2506515 1353 - 0.484109
ggt_1 IL0716 Gamma-glutamyltranspeptidasechromosome CDS772007 1740 - 0.488506
ggt_2 IL0739 Gamma-glutamyltranspeptidasechromosome CDS797149 1710 + 0.482456
glnA IL2437 Glutamine synthetasechromosome CDS2610649 1410 - 0.488652
glnB IL1185 Nitrogen regulatory protein PIIchromosome CDS1274734 339 - 0.442478
glnK IL2164 Nitrogen regulatory protein PIIchromosome CDS2305872 339 + 0.519174
gloA IL1434 Lactoylglutathione lyasechromosome CDS1546505 441 - 0.462585
gltB IL1075 Glutamate synthase, large subunitchromosome CDS1156753 4467 - 0.507499
gltD IL1074 Glutamate synthase, small subunitchromosome CDS1155332 1422 - 0.516878
glyA IL1872 Glycine/serine hydroxymethyltransferasechromosome CDS2000475 1257 - 0.490056
hisA IL1839 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerasechromosome CDS1971576 738 + 0.509485
hisB IL1837 Imidazoleglycerol-phosphate dehydratasechromosome CDS1969919 1077 + 0.52182
hisC IL1836 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylasechromosome CDS1968849 1074 + 0.492551
hisD IL1835 Histidinol dehydrogenasechromosome CDS1967524 1329 + 0.543266
hisF IL1840 Imidazoleglycerol-phosphate synthasechromosome CDS1972295 798 + 0.502506
hisG IL1834 ATP phosphoribosyltransferasechromosome CDS1966628 894 + 0.504474
hisH IL1838 Glutamine amidotransferasechromosome CDS1970992 591 + 0.514382
hisI IL1841 Phosphoribosyl-AMP cyclohydrolasechromosome CDS1973089 609 + 0.486043
hutH_1 IL0134 Histidine ammonia-lyasechromosome CDS143176 1548 + 0.51615
hutH_2 IL2450 Histidine ammonia-lyasechromosome CDS2621074 1536 - 0.516276
hutU IL2451 Urocanate hydratasechromosome CDS2622619 1677 - 0.528324
ilvB IL2585 Acetolactate synthase, catabolic, putativechromosome CDS2778427 1659 + 0.500904
ilvE IL1556 Branched-chain amino-acid aminotransferasechromosome CDS1672201 996 + 0.476908
lysA IL2556 Diaminopimelate decarboxylasechromosome CDS2740297 1263 - 0.488519
lysC IL1439 Aspartokinase III, lysine sensitivechromosome CDS1549904 1341 - 0.472782
madN IL0871 Malonate decarboxylase Na+ pumpchromosome CDS928409 879 + 0.468714
metB IL0219 Cystathionine gamma-synthasechromosome CDS240136 1173 + 0.513214
metJ IL2465 Transcriptional regulator of met regulon (repressor)chromosome CDS2640034 324 - 0.472222
metL IL2466 Aspartokinase IIchromosome CDS2640532 2442 + 0.515561
ordL IL0483 D-amino acid oxidase family protein (deaminating)chromosome CDS508260 1320 - 0.525
pabA IL2321 P-aminobenzoate synthetase, component IIchromosome CDS2486430 582 - 0.429553
pabB IL1706 P-aminobenzoate synthetase, component Ichromosome CDS1837474 1383 + 0.501085
pabC IL1338 4-amino-4-deoxychorismate lyasechromosome CDS1439477 672 - 0.433036
pdxB IL1020 Erythronate-4-phosphate dehyrogenasechromosome CDS1090771 1146 - 0.488656
pepA IL1948 Leucyl aminopeptidasechromosome CDS2073059 1506 + 0.492032
pepB IL2248 Leucyl aminopeptidasechromosome CDS2407065 1299 - 0.511932
pepN_1 IL1277 Aminopeptidase Nchromosome CDS1367349 2592 + 0.455247
pepN_2 IL1930 Zn-dependent aminopeptidasechromosome CDS2056702 2331 + 0.447876
pepP IL2098 Xaa-Pro aminopeptidasechromosome CDS2233412 1323 - 0.518519
pepQ IL0013 Proline aminopeptidase P IIchromosome CDS16630 1359 + 0.458425
pheA IL0038 Prephenate dehydratasechromosome CDS40261 822 - 0.5
pntA IL0669 Alanine dehydrogenasechromosome CDS724303 1128 + 0.473404
prlC IL2327 Oligopeptidase Achromosome CDS2491511 2040 - 0.488725
proA IL1986 Gamma-glutamyl phosphate reductasechromosome CDS2117699 1254 + 0.476077
proB IL1985 Glutamate 5-kinasechromosome CDS2116587 1116 + 0.47491
proC IL1975 Pyrroline-5-carboxylate reductasechromosome CDS2107630 825 + 0.464242
prsA IL0929 Phosphoribosylpyrophosphate synthetasechromosome CDS982455 939 + 0.479233
ptrB IL0074 Protease IIchromosome CDS77423 2163 - 0.459547
putP IL0738 Na+/proline symporterchromosome CDS795511 1533 + 0.474886
sdaA IL1708 L-serine deaminasechromosome CDS1839564 1374 + 0.486172
serA IL2104 D-3-phosphoglycerate dehydrogenasechromosome CDS2238948 1227 + 0.495518
serB_1 IL0785 Phosphoserine phosphatasechromosome CDS842798 621 - 0.426731
serB_2 IL1876 Phosphoserine phosphatasechromosome CDS2007515 663 - 0.470588
serC IL1359 Phosphoserine aminotransferasechromosome CDS1458803 1086 - 0.455801
speA IL1213 Arginine decarboxylasechromosome CDS1302292 1911 + 0.477237
speB IL1212 Agmatinasechromosome CDS1301376 915 + 0.480874
tdcB IL0222 Threonine dehydratasechromosome CDS242233 960 - 0.5
tdh IL0269 Threonine 3-dehydrogenasechromosome CDS281862 1026 - 0.494152
tesA IL1768 Acyl-CoA thioesterase Ichromosome CDS1902485 618 + 0.456311
trpA IL1756 Tryptophan synthase alpha chainchromosome CDS1891223 810 + 0.479012
trpB IL1755 Tryptophan synthase beta chainchromosome CDS1890003 1224 + 0.501634
trpC IL1754 Anthranilate isomerasechromosome CDS1888552 1455 + 0.4811
trpD IL1753 Anthranilate phosphoribosyltransferasechromosome CDS1887546 1014 + 0.52071
trpE IL1751 Anthranilate synthase component Ichromosome CDS1885316 1599 + 0.500938
tyrA IL1721 Chorismate mutase-Tchromosome CDS1852920 1143 - 0.460192
tyrR IL0723 Transcriptional regulator of aromatic amino acids metabolismchromosome CDS780973 1581 - 0.480708