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2024-05-02 07:15:53

Gene list

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COG category: Amino acid transport and metabolism
Organism: Treponema denticola ATCC 35405, ATCC 35405

Number of genes found: 160

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Treponema denticola ATCC 35405, ATCC 35405
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA TDE2091 amino acid ABC transporter, amino acid-binding protein, putativechromosome CDS2118853 834 + 0.346523
NA TDE2314 hypothetical proteinchromosome CDS2352194 246 + 0.357724
NA TDE1273 oligopeptide/dipeptide ABC transporter, peptide-binding proteinchromosome CDS1307119 1596 - 0.344612
NA TDE1067 oligopeptide/dipeptide ABC transporter, ATP-binding proteinchromosome CDS1094634 1158 - 0.42487
NA TDE2756 bacterial extracellular solute-binding protein, family 5chromosome CDS2811988 1620 - 0.377778
NA TDE1075 oligopeptide/dipeptide ABC transporter, ATP-binding proteinchromosome CDS1106102 978 + 0.44274
NA TDE1074 oligopeptide/dipeptide ABC transporter, permease proteinchromosome CDS1104695 1395 + 0.392832
NA TDE1614 conserved hypothetical proteinchromosome CDS1662385 993 - 0.359517
NA TDE2128 membrane protein, putativechromosome CDS2160329 1290 + 0.331783
NA TDE1668 amino acid permease family proteinchromosome CDS1721358 1377 + 0.341322
NA TDE0075 sorbitol dehydrogenase, putativechromosome CDS85617 1047 - 0.418338
NA TDE1076 oligopeptide/dipeptide ABC transporter, ATP-binding proteinchromosome CDS1107076 1041 + 0.449568
NA TDE0202 conserved domain proteinchromosome CDS235960 1023 - 0.371457
NA TDE2584 dipeptidasechromosome CDS2616553 1452 + 0.395317
NA TDE1737 hypothetical proteinchromosome CDS1790273 417 + 0.369305
NA TDE0395 oligopeptide/dipeptide ABC transporter, permease proteinchromosome CDS445095 855 + 0.381287
NA TDE0829 aspartyl aminopeptidase, putativechromosome CDS850275 1293 - 0.428461
NA TDE0673 membrane protein, putativechromosome CDS712130 1044 + 0.314176
NA TDE0046 formiminotransferase-cyclodeaminase family proteinchromosome CDS55298 642 - 0.462617
NA TDE2139 hypothetical proteinchromosome CDS2172172 786 + 0.351145
NA TDE0100 conserved hypothetical proteinchromosome CDS117064 1971 - 0.412988
NA TDE0074 amino acid permease family proteinchromosome CDS84246 1344 - 0.365327
NA TDE2366 high-affinity branched-chain amino acid ABC transporter, permease proteinchromosome CDS2400049 900 - 0.353333
NA TDE2337 aminopeptidasechromosome CDS2373435 1230 + 0.429268
NA TDE2738 oligoendopeptidase F, putativechromosome CDS2792903 1731 + 0.440208
NA TDE1271 oligopeptide/dipeptide ABC transporter, ATP-binding proteinchromosome CDS1305119 972 - 0.346708
NA TDE0296 formiminotransferase, putativechromosome CDS326932 900 - 0.434444
NA TDE1113 hypothetical proteinchromosome CDS1147819 522 - 0.454023
NA TDE2460 aminotransferase, class Vchromosome CDS2486123 1167 + 0.449871
NA TDE1688 membrane protein, putativechromosome CDS1744181 1701 - 0.335685
NA TDE1669 hemolysinchromosome CDS1722745 1194 + 0.346734
NA TDE1716 glyoxalase family proteinchromosome CDS1770941 378 - 0.391534
NA TDE0190 membrane protein, putativechromosome CDS226569 888 - 0.386261
NA TDE1069 oligopeptide/dipeptide ABC transporter, permease proteinchromosome CDS1096773 1017 - 0.412979
NA TDE2192 threonine synthase, putativechromosome CDS2227901 1419 + 0.399577
NA TDE2092 amino acid ABC transporter, amino acid-binding protein, putativechromosome CDS2119703 840 + 0.336905
NA TDE1247 hypothetical proteinchromosome CDS1281763 723 + 0.528354
NA TDE0637 oligopeptide/dipeptide ABC transporter, ATP-binding proteinchromosome CDS671583 999 - 0.396396
NA TDE1883 membrane protein, putativechromosome CDS1905000 933 - 0.404073
NA TDE2001 oligoendopeptidase F, putativechromosome CDS2019865 1794 - 0.403567
NA TDE0796 histidinol phosphate phosphatase HisJ family proteinchromosome CDS820197 810 + 0.420988
NA TDE0986 oligopeptide/dipeptide ABC transporter, ATP-binding proteinchromosome CDS1013201 981 + 0.420999
NA TDE2235 methylaspartate ammonia-lyasechromosome CDS2273440 1239 - 0.444713
NA TDE0152 amino acid permease family proteinchromosome CDS173212 1356 - 0.370944
NA TDE2361 high-affinity branched chain amino acid ABC transporter, amino acid-binding proteinchromosome CDS2395899 1158 - 0.350605
NA TDE0398 oligopeptide/dipeptide ABC transporter, periplasmic peptide-binding proteinchromosome CDS447913 1584 + 0.374369
NA TDE0069 conserved hypothetical protein TIGR00238chromosome CDS76691 1017 + 0.424779
NA TDE2687 L-threonine-O-3-phosphate decarboxylase, putativechromosome CDS2727286 1059 - 0.370161
NA TDE0257 membrane protein, putativechromosome CDS291586 603 - 0.396352
NA TDE1073 oligopeptide/dipeptide ABC transporter, permease proteinchromosome CDS1103655 1041 + 0.400576
NA TDE1367 glyoxalase family proteinchromosome CDS1409117 384 + 0.346354
NA TDE0394 oligopeptide/dipeptide ABC transporter, permease proteinchromosome CDS444121 963 + 0.327103
NA TDE0361 transporter, putativechromosome CDS406129 1374 + 0.42067
NA TDE0679 aminotransferase, class Vchromosome CDS716485 1149 + 0.434291
NA TDE1921 membrane protein, putativechromosome CDS1940409 411 - 0.343066
NA TDE0581 transglutaminase-like domain proteinchromosome CDS616760 3717 + 0.309389
NA TDE0198 conserved hypothetical proteinchromosome CDS233295 990 + 0.410101
NA TDE0068 peptidase, M20/M25/M40 familychromosome CDS75437 1236 + 0.42233
NA TDE2676 threonine synthase, putativechromosome CDS2714425 1314 + 0.406393
NA TDE2365 high-affinity branched-chain amino acid ABC transporter, permease proteinchromosome CDS2399020 1020 - 0.34902
NA TDE1528 hypothetical proteinchromosome CDS1571865 1137 + 0.255057
NA TDE0988 oligopeptide/dipeptide ABC transporter, peptide-binding proteinchromosome CDS1015222 1944 + 0.389918
NA TDE2349 conserved hypothetical proteinchromosome CDS2385326 705 - 0.38156
NA TDE1275 oligopeptide/dipeptide ABC transporter, permease proteinchromosome CDS1309660 954 - 0.340671
NA TDE1068 oligopeptide/dipeptide ABC transporter, ATP-binding proteinchromosome CDS1095784 993 - 0.41994
NA TDE0586 membrane protein, putativechromosome CDS625386 315 + 0.336508
NA TDE1539 hypothetical proteinchromosome CDS1583648 603 + 0.306799
NA TDE0638 oligopeptide/dipeptide ABC transporter, permease proteinchromosome CDS672578 963 - 0.376947
NA TDE2410 hemolysinchromosome CDS2436123 1215 - 0.360494
NA TDE0145 thiamine ABC transporter, ATP-binding proteinchromosome CDS166840 633 + 0.467615
NA TDE1993 aspartate ammonia-lyase, putativechromosome CDS2011007 1392 - 0.428161
NA TDE2364 high-affinity branched-chain amino acid ABC transporter, ATP-binding proteinchromosome CDS2398269 771 - 0.333333
NA TDE0396 oligopeptide/dipeptide ABC transporter, ATP-binding proteinchromosome CDS445952 969 + 0.374613
NA TDE2363 high-affinity branched chain amino acid ABC transporter, ATP-binding proteinchromosome CDS2397562 708 - 0.353107
NA TDE0397 oligopeptide/dipeptide ABC transporter, ATP-binding proteinchromosome CDS446917 978 + 0.344581
NA TDE2052 aminotransferase, class Vchromosome CDS2080542 1203 + 0.401496
NA TDE1195 prolyl endopeptidasechromosome CDS1227724 2058 - 0.405734
NA TDE1977 conserved hypothetical proteinchromosome CDS1990218 1191 + 0.392947
NA TDE1774 conserved hypothetical proteinchromosome CDS1817590 390 - 0.312821
NA TDE2202 membrane proteinchromosome CDS2238774 891 + 0.35578
NA TDE0389 (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putativechromosome CDS440148 1239 + 0.396287
NA TDE2629 peptide ABC transporter, periplasmic peptide-binding protein, putativechromosome CDS2669469 1554 + 0.472329
NA TDE0375 ABC transporter, ATP-binding proteinchromosome CDS429287 951 - 0.318612
NA TDE2589 aminopeptidase, putativechromosome CDS2625090 1407 - 0.393035
NA TDE1259 amino acid carrier family proteinchromosome CDS1292336 1425 - 0.441404
NA TDE0392 (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putativechromosome CDS441936 1179 - 0.402884
NA TDE2037 ATP:guanido phosphotransferase domain proteinchromosome CDS2066737 1074 - 0.361266
NA TDE1482 peptidase, M24 family proteinchromosome CDS1527036 1758 + 0.389078
NA TDE0103 aminotransferase, class-Vchromosome CDS122634 1143 - 0.403325
NA TDE1109 decarboxylase, pyridoxal-dependent familychromosome CDS1143220 1170 + 0.422222
NA TDE0300 cytosol aminopeptidase family proteinchromosome CDS330983 1431 + 0.419986
NA TDE1731 hypothetical proteinchromosome CDS1785622 1404 - 0.420228
NA TDE0519 hypothetical proteinchromosome CDS565528 552 - 0.362319
NA TDE0381 hypothetical proteinchromosome CDS434072 450 + 0.315556
NA TDE2630 peptide ABC transporter, permease protein, putativechromosome CDS2671019 954 + 0.443396
NA TDE1077 membrane protein, putativechromosome CDS1108535 1206 + 0.329187
NA TDE2188 hypothetical proteinchromosome CDS2221664 1548 - 0.331395
NA TDE1194 hypothetical proteinchromosome CDS1225113 2571 + 0.332944
NA TDE0639 oligopeptide/dipeptide ABC transporter, permease proteinchromosome CDS673543 942 - 0.359873
NA TDE2167 pyridine nucleotide-disulphide oxidoreductase family proteinchromosome CDS2198193 2745 - 0.442259
NA TDE2631 peptide ABC transporter, permease protein, putativechromosome CDS2671969 825 + 0.481212
NA TDE1826 hypothetical proteinchromosome CDS1858651 1221 - 0.353808
NA TDE0104 3-dehydroquinate synthasechromosome CDS123773 1032 - 0.396318
NA TDE0166 hypothetical proteinchromosome CDS195140 822 - 0.355231
NA TDE1274 oligopeptide/dipeptide ABC transporter, permease proteinchromosome CDS1308733 918 - 0.336601
NA TDE1640 3-dehydroquinate dehydratase, type 1, putative/shikimate 5-dehydrogenase, putativechromosome CDS1690536 1482 + 0.375843
NA TDE0450 peptidase, M20/M25/M40 familychromosome CDS507186 1434 - 0.423292
NA TDE2471 membrane protein, putativechromosome CDS2493954 1083 - 0.365651
NA TDE2456 conserved hypothetical proteinchromosome CDS2484226 438 - 0.388128
NA TDE1070 oligopeptide/dipeptide ABC transporter, permease proteinchromosome CDS1097790 1026 - 0.371345
NA TDE2654 macrolide efflux protein, putativechromosome CDS2691815 1245 + 0.366265
NA TDE2049 bacterial extracellular solute-binding proteins, family 5chromosome CDS2078005 1593 + 0.38167
NA TDE0636 oligopeptide/dipeptide ABC transporter, ATP-binding proteinchromosome CDS670622 969 - 0.401445
NA TDE0985 oligopeptide/dipeptide ABC transporter, periplasmic peptide-binding protein, putativechromosome CDS1011177 1938 + 0.420021
NA TDE2017 membrane protein, putativechromosome CDS2039113 375 - 0.232
NA TDE2242 antigen, putativechromosome CDS2279659 2466 - 0.409165
NA TDE0371 hypothetical proteinchromosome CDS422827 1848 + 0.293831
NA TDE0987 oligopeptide/dipeptide ABC transporter, ATP-binding proteinchromosome CDS1014181 957 + 0.438871
NA TDE1272 oligopeptide/dipeptide ABC transporter, ATP-binding proteinchromosome CDS1306080 987 - 0.377913
NA TDE0207 permease, GntP familychromosome CDS241742 1356 + 0.427729
NA TDE1594 pyridine nucleotide-disulphide oxidoreductase family proteinchromosome CDS1643083 1830 - 0.43388
NA TDE0089 transglutaminase-like domain proteinchromosome CDS106965 1680 - 0.379762
NA TDE0388 hypothetical proteinchromosome CDS439313 798 + 0.310777
NA TDE0798 transporter, putativechromosome CDS821319 1329 - 0.41535
NA TDE0322 regulatory protein, P-II familychromosome CDS355196 300 - 0.373333
NA TDE0445 amino acid permeasechromosome CDS499884 1281 + 0.398126
NA TDE2228 aminoacyl-histidine dipeptidase, putativechromosome CDS2267377 1446 - 0.401798
arcA TDE0451 arginine deiminasechromosome CDS508793 1233 + 0.414436
arcB TDE2754 ornithine cyclodeaminasechromosome CDS2810851 1020 - 0.404902
arcC TDE2476 carbamate kinasechromosome CDS2498611 930 - 0.447312
argF TDE0929 ornithine carbamoyltransferasechromosome CDS951809 1017 - 0.430678
aroA TDE1686 3-phosphoshikimate 1-carboxyvinyltransferasechromosome CDS1740504 1350 - 0.377778
aroC TDE1132 chorismate synthasechromosome CDS1163555 1086 + 0.440147
aroF TDE2569 phospho-2-dehydro-3-deoxyheptonate aldolasechromosome CDS2596448 1071 + 0.429505
aroH TDE1502 chorismate mutasechromosome CDS1551060 378 + 0.380952
aroK TDE2447 shikimate kinasechromosome CDS2476410 609 - 0.369458
brnQ TDE1889 branched-chain amino acid transport system II carrier proteinchromosome CDS1909590 1389 - 0.383009
gcvH TDE1626 glycine cleavage system H proteinchromosome CDS1675001 369 - 0.395664
gcvP1 TDE1625 glycine cleavage system P protein, subunit 1chromosome CDS1673609 1305 - 0.424521
gcvP2 TDE1624 glycine cleavage system P protein, subunit 2chromosome CDS1672161 1449 - 0.445135
gcvT TDE1627 glycine cleavage system T proteinchromosome CDS1675428 1074 - 0.424581
gdhA TDE0997 glutamate dehydrogenasechromosome CDS1024132 1242 - 0.413043
glmE TDE2236 methylaspartate mutase, E subunitchromosome CDS2274750 1458 - 0.467764
gltA TDE0407 glutamate synthase (NADPH), homotetramericchromosome CDS459101 1512 - 0.466931
glyA TDE2668 serine hydroxymethyltransferasechromosome CDS2704636 1521 - 0.435897
hutH TDE0588 histidine ammonia-lyasechromosome CDS626590 1524 + 0.458661
hutU TDE2606 urocanate hydratasechromosome CDS2646587 2025 + 0.470617
ltaE TDE0005 L-threonine aldolase, low-specificitychromosome CDS5075 1056 - 0.408144
megL TDE2200 methionine gamma-lyasechromosome CDS2237340 1206 - 0.425373
oppA TDE1071 peptide ABC transporter, peptide-binding protein OppAchromosome CDS1098903 1776 - 0.415541
pepF TDE2639 oligoendopeptidase Fchromosome CDS2678260 1890 + 0.424868
pepT TDE0925 peptidase Tchromosome CDS947987 1206 + 0.415423
prs TDE2723 phosphoribosyl pyrophosphate synthetasechromosome CDS2780961 1257 - 0.407319
ptrB TDE2140 protease IIchromosome CDS2173173 2058 - 0.40622
sdhA TDE1506 L-serine dehydratase, iron-sulfur-dependent, alpha subunitchromosome CDS1554242 891 - 0.45679
sdhB TDE1507 L-serine dehydratase, iron-sulfur-dependent, beta subunitchromosome CDS1555152 663 - 0.441931
selA TDE2477 L-seryl-tRNA selenium transferasechromosome CDS2499663 1347 + 0.446177
selD TDE2461 selenide, water dikinase (selenocysteine-containing)chromosome CDS2487286 1065 - 0.416901
tnaA TDE0251 tryptophanasechromosome CDS284807 1380 - 0.405797
tpl TDE1118 tyrosine phenol-lyasechromosome CDS1149972 1380 - 0.436232