Gene list
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COG category: Amino acid transport and metabolism
Organism: Haemophilus ducreyi 35000HP, 35000HP
Number of genes found: 117
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Haemophilus ducreyi 35000HP, 35000HP | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | HD1141 | conserved hypothetical protein | chromosome | CDS | 906346 | 2004 | + | 0.404192 |
NA | HD1671 | ABC transporter, ATP-binding protein and permease protein | chromosome | CDS | 1393511 | 1956 | + | 0.419223 |
NA | HD1713 | hypothetical protein | chromosome | CDS | 1428552 | 747 | - | 0.331995 |
NA | HD0146 | hypothetical protein | chromosome | CDS | 99312 | 966 | + | 0.464803 |
NA | HD0835 | putative transport protein | chromosome | CDS | 665230 | 1326 | - | 0.381599 |
NA | HD1254 | putative Na/dicarboxylate symporter | chromosome | CDS | 1018150 | 1212 | + | 0.383663 |
NA | HD1109 | putative oxalate/formate antiporter | chromosome | CDS | 884370 | 1542 | + | 0.399481 |
NA | HD1678 | putative integral membrane protein | chromosome | CDS | 1398421 | 867 | - | 0.342561 |
NA | HD0206 | conserved hypothetical protein | chromosome | CDS | 149085 | 933 | + | 0.34298 |
NA | HD0148 | conserved hypothetical protein | chromosome | CDS | 100604 | 1371 | + | 0.525164 |
NA | HD0409 | conserved hypothetical protein | chromosome | CDS | 325035 | 600 | + | 0.35 |
NA | HD2035 | amino acid ABC transporter, periplasmic amino acid-binding protein | chromosome | CDS | 1696897 | 783 | - | 0.394636 |
NA | HD0106 | hypothetical protein | chromosome | CDS | 79968 | 276 | + | 0.416667 |
NA | HD1013 | hypothetical protein | chromosome | CDS | 805434 | 231 | - | 0.359307 |
NA | HD1639 | hypothetical protein | chromosome | CDS | 1359265 | 1209 | + | 0.399504 |
NA | HD0363 | putative aspartate-semialdehyde dehydrogenase | chromosome | CDS | 282448 | 987 | - | 0.389058 |
NA | HD1410 | conserved hypothetical protein | chromosome | CDS | 1153915 | 993 | + | 0.363545 |
NA | HD2032 | amino acid ABC transporter, ATP-binding protein | chromosome | CDS | 1695251 | 759 | - | 0.403162 |
NA | HD0461 | putative amino-acid transporter, sodium-dependent | chromosome | CDS | 363278 | 1368 | + | 0.421053 |
NA | HD0023 | possible transport system permease protein | chromosome | CDS | 23295 | 1065 | + | 0.367136 |
NA | HD1619 | putative sodium/alanine symporter | chromosome | CDS | 1336482 | 1449 | - | 0.386473 |
NA | HD1320 | Putative integral membrane protein | chromosome | CDS | 1075866 | 825 | - | 0.380606 |
NA | HD1595 | transcription regulator, GntR family | chromosome | CDS | 1315981 | 1302 | + | 0.341014 |
NA | HD1670 | ABC transporter, permease protein | chromosome | CDS | 1392558 | 954 | + | 0.400419 |
NA | HD1560 | hypothetical protein | chromosome | CDS | 1282671 | 369 | + | 0.409214 |
NA | HD0947 | hypothetical protein | chromosome | CDS | 752505 | 282 | - | 0.450355 |
NA | HD1666 | probable phosphatase | chromosome | CDS | 1388251 | 549 | - | 0.371585 |
NA | HD1672 | ABC transporter, ATP-binding subunit | chromosome | CDS | 1395496 | 807 | + | 0.3829 |
NA | HD1437 | putative phage-related membrane protein | chromosome | CDS | 1178815 | 303 | - | 0.330033 |
NA | HD1669 | putative ABC transporter periplasmic binding protein | chromosome | CDS | 1390763 | 1578 | + | 0.39924 |
NA | HD0464 | putative aminotransferase | chromosome | CDS | 364820 | 1203 | + | 0.408146 |
NA | HD1735 | putative oligopeptide transporter, periplasmic-binding protein | chromosome | CDS | 1447073 | 1524 | - | 0.366142 |
NA | HD1095 | hypothetical protein | chromosome | CDS | 874155 | 408 | + | 0.370098 |
NA | HD1319 | putative integral membrane protein | chromosome | CDS | 1075189 | 666 | - | 0.391892 |
NA | HD2033 | amino-acid ABC transporter permease protein | chromosome | CDS | 1696043 | 717 | - | 0.403068 |
ampG | HD0827 | permease and possible signal transducer AmpG | chromosome | CDS | 657033 | 1284 | - | 0.393302 |
ansB | HD0372 | L-asparaginase II | chromosome | CDS | 290711 | 1050 | - | 0.411429 |
arcB1 | HD0232 | ornithine carbamoyltransferase | chromosome | CDS | 170989 | 1005 | - | 0.379104 |
arcD | HD0568 | putative arginine/ornithine antiporter protein | chromosome | CDS | 435736 | 1401 | - | 0.389722 |
argA | HD1384 | amino-acid acetyltransferase | chromosome | CDS | 1130797 | 1314 | + | 0.372146 |
argB | HD0891 | acetylglutamate kinase | chromosome | CDS | 714218 | 855 | + | 0.383626 |
argC | HD0890 | N-acetyl-gamma-glutamyl-phosphate reductase | chromosome | CDS | 713264 | 945 | + | 0.397884 |
argD | HD0892 | acetylornithine aminotransferase | chromosome | CDS | 715069 | 1185 | + | 0.398312 |
argE | HD0566 | acetylornithine deacetylase | chromosome | CDS | 434657 | 1023 | - | 0.410557 |
argG | HD1204 | argininosuccinate synthetase | chromosome | CDS | 979180 | 1332 | + | 0.379129 |
argH | HD1033 | argininosuccinate lyase | chromosome | CDS | 823942 | 1377 | + | 0.39724 |
aroA | HD1383 | 3-phosphoshikimate 1-carboxyvinyltransferase | chromosome | CDS | 1129395 | 1308 | + | 0.404434 |
aroB | HD0422 | 3-dehydroquinate synthase | chromosome | CDS | 334498 | 1089 | - | 0.402204 |
aroC | HD1274 | chorismate synthase | chromosome | CDS | 1036193 | 1083 | + | 0.423823 |
aroE | HD0415 | dehydroshikimate reductase | chromosome | CDS | 328786 | 831 | + | 0.392298 |
aroF | HD0444 | 3-deoxy-D-arabinoheptulosonate-7-phosphatesyntha se | chromosome | CDS | 349730 | 1080 | - | 0.387037 |
aroG | HD1475 | phospho-2-dehydro-3-deoxyheptonate aldolase | chromosome | CDS | 1209216 | 1113 | - | 0.389937 |
aroK | HD0423 | shikimate kinase I | chromosome | CDS | 335597 | 525 | - | 0.390476 |
aroQ | HD0632 | probable 3-dehydroquinate dehydratase | chromosome | CDS | 497410 | 435 | + | 0.337931 |
artI | HD0812 | arginine ABC transporter, periplasmic-binding protein | chromosome | CDS | 644257 | 720 | + | 0.35 |
artM | HD0814 | arginine transport system permease protein | chromosome | CDS | 645652 | 684 | + | 0.371345 |
artP | HD0811 | arginine ABC transporter, ATP-binding protein | chromosome | CDS | 643486 | 735 | + | 0.386395 |
artQ | HD0813 | arginine transport system permease protein | chromosome | CDS | 644981 | 666 | + | 0.396396 |
asd | HD0847 | aspartate semialdehyde dehydrogenase | chromosome | CDS | 674212 | 1119 | - | 0.404826 |
asnA | HD1913 | asparagine synthetase A | chromosome | CDS | 1608977 | 993 | + | 0.373615 |
aspA | HD0564 | aspartate ammonia-lyase | chromosome | CDS | 430360 | 1428 | + | 0.383754 |
aspC | HD1419 | aspartate aminotransferase | chromosome | CDS | 1163837 | 1191 | - | 0.393787 |
brnQ | HD0709 | branched-chain amino acid carrier protein | chromosome | CDS | 562116 | 1305 | + | 0.363985 |
carA | HD0235 | carbamoyl-phosphate synthase, small subunit | chromosome | CDS | 175357 | 1170 | - | 0.404274 |
carB | HD0233 | carbamoyl-phosphate synthase, large subunit | chromosome | CDS | 172092 | 3228 | - | 0.408302 |
cysE | HD0659 | serine acetyltransferase | chromosome | CDS | 522487 | 816 | - | 0.433824 |
cysK | HD0896 | cysteine synthase | chromosome | CDS | 717778 | 951 | - | 0.404837 |
cysZ | HD0832 | cysteine synthetase | chromosome | CDS | 662703 | 888 | + | 0.352477 |
dapA | HD1107 | dihydrodipicolinate synthase (DHDPS) | chromosome | CDS | 882025 | 894 | + | 0.395973 |
dapB | HD1398 | dihydrodipicolinate reductase | chromosome | CDS | 1145196 | 810 | + | 0.404938 |
dapD | HD0630 | 2,3,4,5-tetrahydropyridine-2-carboxylateN-succin yltransferase | chromosome | CDS | 496188 | 825 | + | 0.403636 |
dapE | HD0642 | succinyl-diaminopimelate desuccinylase | chromosome | CDS | 504718 | 1131 | - | 0.419098 |
dapF | HD0026 | diaminopimelate epimerase | chromosome | CDS | 26348 | 825 | + | 0.421818 |
dat | HD0729 | diaminobutyrate--pyruvate aminotransferase | chromosome | CDS | 574450 | 1365 | - | 0.414652 |
ddc | HD0726 | L-2,4-diaminobutyrate decarboxylase | chromosome | CDS | 572758 | 1536 | - | 0.400391 |
dppB | HD0312 | dipeptide transport system permease protein | chromosome | CDS | 246284 | 1005 | + | 0.366169 |
dppC | HD0313 | dipeptide transport system permease protein | chromosome | CDS | 247309 | 888 | + | 0.382883 |
dppD | HD0315 | dipeptide transport ATP-binding protein | chromosome | CDS | 248208 | 1005 | + | 0.408955 |
dppF | HD0316 | dipeptide transport ATP-binding protein | chromosome | CDS | 249190 | 1005 | + | 0.395025 |
glnA | HD0750 | glutamine synthetase | chromosome | CDS | 591128 | 1431 | + | 0.387142 |
glnB | HD0062 | putative nitrogen regulatory protein P-II | chromosome | CDS | 53408 | 339 | + | 0.386431 |
gloA | HD0610 | lactoylglutathione lyase | chromosome | CDS | 469916 | 408 | + | 0.384804 |
glpB | HD1158 | anaerobic glycerol-3-phosphate dehydrogenase, subunit B | chromosome | CDS | 940424 | 1281 | + | 0.389539 |
gltS | HD1707 | sodium/glutamate symporter | chromosome | CDS | 1422527 | 1221 | + | 0.406224 |
hbpA | HD0215 | heme-binding protein A | chromosome | CDS | 155855 | 1635 | - | 0.393272 |
hcat | HD0391 | probable 3-phenylpropionic acid transporter | chromosome | CDS | 309601 | 1155 | - | 0.379221 |
iscS | HD1082 | cysteine desulfurase | chromosome | CDS | 861728 | 1221 | + | 0.386568 |
lysA | HD0036 | diaminopimelate decarboxylase | chromosome | CDS | 32231 | 1254 | + | 0.423445 |
lysC | HD1375 | lysine-sensitive aspartokinase III | chromosome | CDS | 1122685 | 1356 | - | 0.394543 |
metJ | HD0675 | met repressor | chromosome | CDS | 533928 | 318 | - | 0.393082 |
nanA | HD1850 | N-acetylneuraminate lyase, truncated | chromosome | CDS | 1554010 | 810 | - | 0.371605 |
pabB | HD0408 | p-aminobenzoate synthase component I | chromosome | CDS | 324068 | 990 | + | 0.364646 |
pepA | HD0555 | aminopeptidase A/I | chromosome | CDS | 425279 | 1500 | + | 0.407333 |
pepB | HD1169 | peptidase B | chromosome | CDS | 948543 | 1311 | - | 0.431731 |
pepD | HD1832 | aminoacyl-histidine dipeptidase | chromosome | CDS | 1534457 | 1449 | + | 0.36715 |
pepN | HD0976 | aminopeptidase N protein | chromosome | CDS | 772508 | 2610 | + | 0.374713 |
pepP | HD1418 | Xaa-Pro aminopeptidase | chromosome | CDS | 1162475 | 1287 | + | 0.389277 |
pheA | HD0873 | P-protein | chromosome | CDS | 696571 | 1164 | - | 0.344502 |
potA | HD0572 | spermidine/putrescine transport ATP-binding protein | chromosome | CDS | 441823 | 1116 | + | 0.37724 |
potB | HD0573 | spermidine/putrescine transport system permease protein | chromosome | CDS | 442925 | 867 | + | 0.3391 |
potC | HD0574 | spermidine/putrescine transport system permease protein | chromosome | CDS | 443791 | 768 | + | 0.333333 |
potD1 | HD0994 | spermidine/putrescine-binding periplasmic protein (SPBP) | chromosome | CDS | 789156 | 1047 | - | 0.348615 |
potD2 | HD1074 | spermidine/putrescine-binding periplasmic protein (SPBP) | chromosome | CDS | 852497 | 1080 | + | 0.35 |
prlC | HD0988 | oligopeptidase A | chromosome | CDS | 782105 | 2031 | - | 0.408173 |
prsA | HD1627 | ribose-phosphate pyrophosphokinase | chromosome | CDS | 1347890 | 951 | - | 0.402734 |
putP | HD0999 | sodium/proline symporter, proline permease | chromosome | CDS | 793737 | 1524 | - | 0.403543 |
sapA | HD1230 | peptide transport periplasmic protein SapA | chromosome | CDS | 996781 | 1683 | + | 0.368984 |
sdaA | HD1142 | L-serine dehydratase | chromosome | CDS | 908408 | 1380 | - | 0.406522 |
sdaC | HD1143 | serine transporter | chromosome | CDS | 909898 | 1227 | - | 0.355338 |
selA | HD1994 | L-seryl-tRNA (Sec) selenium transferase | chromosome | CDS | 1660796 | 1383 | - | 0.409255 |
selD | HD0577 | selenide, water dikinase | chromosome | CDS | 445959 | 972 | + | 0.412551 |
serC | HD1382 | phosphoserine aminotransferase | chromosome | CDS | 1128236 | 1089 | + | 0.382002 |
tnaB | HD0648 | tryptophan-specific transport protein | chromosome | CDS | 511908 | 1200 | - | 0.368333 |
trpG | HD0406 | anthranilate synthase component II | chromosome | CDS | 321755 | 588 | - | 0.377551 |
tryP | HD1875 | tyrosine-specific transport protein | chromosome | CDS | 1570582 | 1227 | - | 0.368378 |
tyrP | HD1499 | tyrosine-specific transport protein | chromosome | CDS | 1230139 | 1218 | - | 0.352217 |
tyrR | HD1229 | transcriptional regulatory protein | chromosome | CDS | 995630 | 1152 | + | 0.374132 |