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2024-05-03 14:55:20

Gene list

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COG category: Amino acid transport and metabolism
Organism: Leifsonia xyli subsp. xyli str. CTCB07, CTCB07

Number of genes found: 185

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Leifsonia xyli subsp. xyli str. CTCB07, CTCB07
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Lxx19584 conserved hypothetical proteinchromosome CDS2016133 474 - 0.510549
NA Lxx12080 conserved hypothetical proteinchromosome CDS1254887 2313 + 0.707739
NA Lxx14457 conserved hypothetical proteinchromosome CDS1498435 393 - 0.648855
NA Lxx21330 acetyltransferasechromosome CDS2194242 498 - 0.660643
NA Lxx08620 Integral membrane proteinchromosome CDS872403 936 + 0.663462
NA Lxx18820 ABC transporter, ATP-binding proteinchromosome CDS1942683 522 + 0.704981
NA Lxx17780 ABC transporter, permease proteinchromosome CDS1845103 1212 + 0.69802
NA Lxx14870 sugar transporterchromosome CDS1544707 1173 - 0.717818
NA Lxx21280 conserved hypothetical proteinchromosome CDS2189770 828 + 0.695652
NA Lxx16840 conserved hypothetical proteinchromosome CDS1749676 1035 - 0.717874
NA Lxx12110 conserved hypothetical proteinchromosome CDS1259209 1053 - 0.712251
NA Lxx08160 transmembrane efflux pumpchromosome CDS823465 1374 + 0.684134
NA Lxx18720 transcriptional regulator, LuxR familychromosome CDS1928580 2520 + 0.70873
NA Lxx14520 ABC transporter, permease proteinchromosome CDS1507499 1269 - 0.707644
NA Lxx05120 conserved hypothetical proteinchromosome CDS513804 369 - 0.653117
NA Lxx07740 secreted proteinchromosome CDS775252 1026 + 0.60039
NA Lxx02220 hypothetical proteinchromosome CDS224122 912 - 0.671053
NA Lxx19760 hypothetical proteinchromosome CDS2038901 519 + 0.680154
NA Lxx02570 peptide transporter, PTR familychromosome CDS261436 1494 + 0.674029
NA Lxx14160 conserved hypothetical proteinchromosome CDS1463400 924 - 0.715368
NA Lxx13240 secreted hydrolasechromosome CDS1377455 687 - 0.688501
NA Lxx11940 conserved hypothetical proteinchromosome CDS1230536 786 - 0.689567
NA Lxx17840 conserved hypothetical proteinchromosome CDS1850868 435 - 0.712644
NA Lxx16650 sugar transporterchromosome CDS1730824 1413 + 0.701345
NA Lxx12350 conserved hypothetical proteinchromosome CDS1285824 777 - 0.756757
NA Lxx02340 ABC transporter, permease proteinchromosome CDS232592 1245 - 0.711647
NA Lxx13440 amino acid permeasechromosome CDS1395457 1446 + 0.64592
NA Lxx21090 hypothetical proteinchromosome CDS2165057 555 - 0.702703
NA Lxx07400 conserved hypothetical proteinchromosome CDS738831 615 + 0.704065
NA Lxx14920 conserved hypothetical proteinchromosome CDS1549477 573 + 0.691099
NA Lxx12380 conserved hypothetical proteinchromosome CDS1291172 432 + 0.655093
NA Lxx24640 arginine/ornithine antiporterchromosome CDS2521119 1422 + 0.69128
NA Lxx06690 oxidoreductasechromosome CDS666340 318 - 0.685535
NA Lxx02050 hypothetical proteinchromosome CDS200073 1986 - 0.690332
NA Lxx15010 ABC transporter, ATP-binding proteinchromosome CDS1562043 276 - 0.663043
NA Lxx16230 aminotransferasechromosome CDS1688459 1119 - 0.727435
NA Lxx15080 peptidasechromosome CDS1568421 1356 - 0.720501
NA Lxx00370 DNA-binding helix-turn-helix proteinchromosome CDS37296 1155 + 0.586147
NA Lxx19570 conserved hypothetical proteinchromosome CDS2013818 306 - 0.660131
NA Lxx06835 H+ antiporter-3 of the major facilitator superfamily (MFS)chromosome CDS680157 1224 - 0.595588
NA Lxx06980 membrane proteinchromosome CDS699528 507 + 0.682446
NA Lxx02495 conserved hypothetical proteinchromosome CDS248725 477 + 0.570231
NA Lxx14750 sugar transporterchromosome CDS1533301 1503 - 0.655356
NA Lxx10180 major facilitator superfamily permeasechromosome CDS1042057 1251 + 0.696243
NA Lxx14980 threonine synthasechromosome CDS1560255 1410 + 0.686525
NA Lxx20440 hypothetical proteinchromosome CDS2094531 1092 - 0.728938
NA Lxx15560 lyasechromosome CDS1621506 381 + 0.687664
NA Lxx09350 conserved hypothetical proteinchromosome CDS958934 744 + 0.702957
NA Lxx10730 transcriptional regulator, GntR familychromosome CDS1094906 1350 - 0.721482
NA Lxx07270 integral membrane proteinchromosome CDS729374 483 + 0.716356
NA Lxx23150 integral membrane proteinchromosome CDS2384253 909 - 0.686469
NA Lxx18620 conserved hypothetical proteinchromosome CDS1918419 438 - 0.6621
NA Lxx04050 hypothetical proteinchromosome CDS406514 252 - 0.65873
NA Lxx20650 conserved hypothetical proteinchromosome CDS2119833 867 + 0.704729
NA Lxx19280 hypothetical proteinchromosome CDS1988750 414 - 0.690821
NA Lxx21960 conserved hypothetical proteinchromosome CDS2263733 1035 + 0.72657
adh2 Lxx23600 alcohol dehydrogenasechromosome CDS2422886 1050 - 0.698095
albF Lxx22810 albicidin efflux pumpchromosome CDS2355304 1539 - 0.690058
ald Lxx12100 alanine dehydrogenasechromosome CDS1257829 1116 - 0.689068
ansP Lxx21840 L-asparagine permeasechromosome CDS2249180 1548 + 0.677003
arg1 Lxx06520 arginasechromosome CDS651556 945 - 0.712169
argB Lxx06050 acetylglutamate kinasechromosome CDS617094 909 + 0.683168
argC Lxx06030 N-acetyl-gamma-glutamyl-phosphate reductasechromosome CDS614898 1044 + 0.710728
argD Lxx06060 acetylornithine aminotransferasechromosome CDS617999 1212 + 0.718647
argF Lxx06070 ornithine carbamoyltransferasechromosome CDS619232 939 + 0.696486
argG Lxx21970 argininosuccinate synthetasechromosome CDS2266569 1437 + 0.688239
argH Lxx06080 argininosuccinate lyasechromosome CDS620203 1428 + 0.707283
argJ Lxx06040 glutamate N-acetyltransferasechromosome CDS615938 1155 + 0.715151
aro Lxx15410 2-dehydro-3-deoxyphosphoheptonate aldolasechromosome CDS1604818 1329 - 0.667419
aroA Lxx19180 3-phosphoshikimate 1-carboxyvinyltransferasechromosome CDS1980042 1311 + 0.726926
aroB Lxx10970 3-dehydroquinate synthasechromosome CDS1120707 1080 + 0.690741
aroC Lxx10950 chorismate synthasechromosome CDS1118961 1209 + 0.72622
aroD Lxx10990 3-dehydroquinate dehydratasechromosome CDS1122121 447 + 0.686801
aroE Lxx00310 shikimate 5-dehydrogenasechromosome CDS30026 720 - 0.675
aroE Lxx10940 shikimate 5-dehydrogenasechromosome CDS1117834 1086 + 0.713628
aroK Lxx10960 shikimate kinase Ichromosome CDS1120210 501 + 0.698603
asd Lxx03460 aspartate-semialdehyde dehydrogenasechromosome CDS343125 1071 + 0.696545
asn Lxx21710 asparagine synthasechromosome CDS2235523 1839 + 0.657966
aspA Lxx08930 aspartate ammonia-lyasechromosome CDS909996 1425 + 0.668772
aspC Lxx09910 aspartate transaminasechromosome CDS1012977 1290 - 0.703101
avtA Lxx25240 valine-pyruvate aminotransferasechromosome CDS2576529 1323 + 0.639456
carA Lxx11090 carbamoyl-phosphate synthase, small chainchromosome CDS1134195 1164 + 0.688144
carB Lxx11100 carbamoylphosphate synthase, large chainchromosome CDS1135358 3282 + 0.678245
csd Lxx09470 cysteine desulfurasechromosome CDS971729 1281 + 0.712724
cysD Lxx18930 O-acetylhomoserine (thiol)-lyasechromosome CDS1951252 1323 - 0.671202
cysE Lxx06920 serine O-acetyltransferasechromosome CDS694435 564 - 0.725177
cysM2 Lxx17700 cystathionine beta-synthasechromosome CDS1835765 984 - 0.726626
dapA Lxx10270 dihydrodipicolinate synthasechromosome CDS1049885 933 - 0.703108
dapB Lxx16160 dihydrodipicolinate reductasechromosome CDS1678785 768 - 0.699219
dapD Lxx09040 2,3,4,5-tetrahydropyridine-2-carboxylateN-succin yltransferasechromosome CDS921552 999 - 0.724725
dapE Lxx09050 succinyl-diaminopimelate desuccinylasechromosome CDS922568 1083 + 0.688827
dapF Lxx15970 diaminopimelate epimerasechromosome CDS1662267 879 - 0.707622
dbdD Lxx22060 L-2,4-diaminobutyrate decarboxylasechromosome CDS2275269 1410 - 0.721277
dcsA Lxx22470 conserved hypothetical proteinchromosome CDS2318650 921 + 0.679696
ddaH Lxx19630 dimethylarginine dimethylaminohydrolasechromosome CDS2022535 789 - 0.69962
dppA Lxx16350 ABC transporter, solute-binding proteinchromosome CDS1699560 1554 - 0.643501
dppA Lxx23050 ABC transporter, substrate binding proteinchromosome CDS2375128 1677 + 0.654144
dppB Lxx16340 ABC transporter, permease proteinchromosome CDS1698567 930 - 0.68172
dppB Lxx08540 ABC transporter, permease proteinchromosome CDS864732 1098 + 0.664845
dppB Lxx19250 ABC transporter, permease proteinchromosome CDS1985348 963 - 0.688474
dppC Lxx23070 ABC transporter, permease proteinchromosome CDS2377682 927 + 0.690399
dppC Lxx08550 ABC transporter, permease proteinchromosome CDS865912 975 + 0.675897
frp Lxx01840 ferredoxin/ferredoxin-NADP reductasechromosome CDS178455 1371 + 0.649161
fsr Lxx15890 membrane efflux protein (fosmidomycin resistance)chromosome CDS1653730 1272 + 0.653302
gabT Lxx12170 4-aminobutyrate aminotransferasechromosome CDS1263794 1338 - 0.693573
gdhA Lxx11950 NADP-specific glutamate dehydrogenasechromosome CDS1233261 1353 - 0.685883
glnA Lxx10080 glutamine synthetasechromosome CDS1029620 1425 - 0.634386
glnA Lxx10010 glutamine synthetasechromosome CDS1022030 1338 + 0.665172
gltB Lxx11320 glutamate synthase, alpha subunitchromosome CDS1157498 4578 + 0.68851
gltD Lxx11330 glutamate synthase, beta subunitchromosome CDS1162118 1458 + 0.697531
glyA Lxx18640 serine hydroxymethyltransferasechromosome CDS1919872 1293 - 0.695282
goaG Lxx12130 4-aminobutyrate aminotransferasechromosome CDS1260258 1323 - 0.693878
hisA Lxx15830 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerasechromosome CDS1647535 747 - 0.702811
hisB Lxx15850 imidazoleglycerol-phosphate dehydratasechromosome CDS1648954 603 - 0.681592
hisC1 Lxx15860 histidinol-phosphate aminotransferase 1chromosome CDS1649553 1116 - 0.702509
hisC2 Lxx25080 histidinol-phosphate aminotransferase 2chromosome CDS2560021 1086 - 0.689687
hisD Lxx15120 histidinol dehydrogenasechromosome CDS1572987 1311 - 0.727689
hisE Lxx11210 phosphoribosyl-ATP pyrophosphatasechromosome CDS1148562 264 + 0.636364
hisF Lxx11230 imidazoleglycerol-phosphate synthasechromosome CDS1149713 765 + 0.691503
hisG Lxx11220 ATP phosphoribosyltransferasechromosome CDS1148874 840 + 0.696429
hisH Lxx15840 amidotransferasechromosome CDS1648328 630 - 0.711111
hisI Lxx11240 phosphoribosyl-AMP cyclohydrolasechromosome CDS1150474 378 + 0.65873
hutH Lxx22140 histidine ammonia-lyasechromosome CDS2288272 1317 + 0.728929
ilvA Lxx16900 threonine dehydratasechromosome CDS1754148 1251 - 0.69944
ilvB Lxx13200 acetolactate synthase, large subunitchromosome CDS1370997 1821 - 0.671609
ilvC Lxx13170 ketol-acid reductoisomerasechromosome CDS1369392 1029 - 0.66861
ilvD Lxx13210 dihydroxy-acid dehydratase proteinchromosome CDS1372875 1695 - 0.669027
ilvE Lxx13120 branched-chain amino acid aminotransferasechromosome CDS1364222 1134 - 0.669312
ilvN Lxx13180 acetolactate synthase, small subunitchromosome CDS1370484 510 - 0.637255
iscS Lxx16520 cysteine desulfurasechromosome CDS1721061 1146 + 0.745201
leuA Lxx14490 2-isopropylmalate synthasechromosome CDS1501628 1773 - 0.65877
leuB Lxx13130 3-isopropylmalate dehydrogenasechromosome CDS1365378 1074 - 0.68622
leuC Lxx09660 3-isopropylmalate dehydratase (large subunit)chromosome CDS988485 1461 + 0.684463
leuD Lxx09680 3-isopropylmalate dehydratase (small subunit)chromosome CDS989945 600 + 0.656667
livF Lxx15000 ABC transporter, ATP-binding proteinchromosome CDS1561680 360 - 0.647222
lysA Lxx06860 diaminopimelate decarboxylasechromosome CDS685906 1416 + 0.717514
lysC Lxx03450 aspartate kinasechromosome CDS341764 1287 + 0.67366
lysL Lxx24220 phage-related lysozymechromosome CDS2477533 945 + 0.640212
lysL Lxx03750 phage-related lysozymechromosome CDS380600 948 - 0.64135
metA Lxx18950 homoserine o-acetyltransferase proteinchromosome CDS1953565 1209 + 0.698925
metB Lxx03230 cystathionine gamma-synthasechromosome CDS320962 1155 + 0.702165
moaD Lxx19230 ABC transporter, ATP-binding proteinchromosome CDS1983682 1089 - 0.71809
nifS Lxx14420 cysteine desulfurasechromosome CDS1487453 1179 - 0.743003
oppA Lxx16400 dipeptide porterchromosome CDS1706791 1788 - 0.64094
oppA Lxx08530 ABC transporter, solute-binding proteinchromosome CDS863022 1617 + 0.636364
oppB Lxx16390 ABC transporter, permease proteinchromosome CDS1705066 1467 - 0.657123
oppC Lxx16380 ABC transporter, permease proteinchromosome CDS1704056 1011 - 0.649852
oppF Lxx08570 oligopeptide porterchromosome CDS868581 846 + 0.70922
opuAB Lxx09520 ABC-type glycine betaine transport, permease proteinchromosome CDS976139 1716 + 0.678904
pabC Lxx17640 branched-chain amino acid aminotransferasechromosome CDS1832039 891 + 0.680135
pep Lxx10160 aminopeptidasechromosome CDS1039497 1491 - 0.732394
pepN Lxx08760 aminopeptidase Nchromosome CDS885760 2544 - 0.670991
pepP Lxx09170 aminopeptidase Pchromosome CDS931980 1617 - 0.706865
pepQ Lxx17820 dipeptidasechromosome CDS1849458 1119 + 0.711349
pheA Lxx02400 prephenate dehydratasechromosome CDS237687 984 - 0.712398
pimH Lxx12880 integral membrane efflux proteinchromosome CDS1339381 1347 + 0.698589
pimH Lxx02700 integral membrane efflux proteinchromosome CDS273655 1308 - 0.693425
poaA Lxx02530 proline dehydrogenasechromosome CDS255026 3708 + 0.68932
proA Lxx08080 gamma-glutamylphosphate reductasechromosome CDS817414 1266 + 0.693523
proB Lxx08070 gamma-glutamate kinasechromosome CDS816591 813 + 0.688807
proC Lxx01720 pyrroline-5-carboxylate reductasechromosome CDS167459 810 + 0.724691
proP Lxx08800 proline/betaine transporterchromosome CDS890802 1545 + 0.673786
proV Lxx12250 ABC-type glycine betaine transport, ATP-binding proteinchromosome CDS1275185 894 + 0.683445
proW Lxx12260 ABC-type glycine betaine transport, permease proteinchromosome CDS1276075 690 + 0.676812
proY Lxx23660 amino acid permeasechromosome CDS2429357 1359 - 0.676968
proZ Lxx12270 ABC-type glycine betaine transport, permease proteinchromosome CDS1276761 744 + 0.701613
psrA Lxx17420 ribose-phosphate pyrophosphokinasechromosome CDS1808413 978 - 0.677914
ptrB Lxx02110 protease IIchromosome CDS207416 2157 + 0.68382
serA Lxx08580 phosphoglycerate dehydrogenasechromosome CDS869554 909 + 0.716172
serA Lxx13140 D-3-phosphoglycerate dehydrogenasechromosome CDS1366824 1593 - 0.673572
serB Lxx11750 phosphoserine phosphatasechromosome CDS1211006 699 - 0.712446
serC Lxx17890 phosphoserine aminotransferasechromosome CDS1854439 1116 + 0.691756
thrA Lxx06870 homoserine dehydrogenasechromosome CDS687318 1356 + 0.70649
thrB Lxx06890 homoserine kinasechromosome CDS689787 972 + 0.705761
thrC Lxx06880 threonine synthasechromosome CDS688675 1113 + 0.691824
trpA Lxx11300 tryptophan synthase alpha subunitchromosome CDS1155471 786 + 0.717557
trpB Lxx11290 tryptophan synthase beta subunitchromosome CDS1154263 1212 + 0.694719
trpC Lxx11280 indole-3-glycerol phosphate synthasechromosome CDS1153481 783 + 0.719029
trpD Lxx09860 anthranilate phosphoribosyltransferasechromosome CDS1009360 1050 + 0.707619
trpE Lxx12360 anthranilate synthase component Ichromosome CDS1286636 1458 + 0.727709
trpE Lxx11250 anthranilate synthase component Ichromosome CDS1150899 1560 + 0.702564
trpG Lxx00200 anthranilate synthase component IIchromosome CDS18828 639 + 0.649452
tyrA Lxx05720 prephenate dehydrogenasechromosome CDS581839 1089 + 0.724518
tyrA Lxx23250 chorismate mutasechromosome CDS2391784 315 - 0.650794
yuxL Lxx08400 acylaminoacyl-peptidasechromosome CDS846150 2028 + 0.717456