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# Rhodoferax ferrireducens DSM 15236, DSM 15236

>Rfer_1921 dihydroxy-acid dehydratase
MDIKPVILNPRSKNITEGKSRAPNRSMYYAMGYEADDFKKPMIGVANGHS
TITPCNSGLQKLADAAIAAIEEAGGNAQVFGTPTISDGMSMGTEGMKYSL
VSREVISDCIETCVQGQWMDGVLVIGGCDKNMPGGLMGMLRANVPAIYVY
GGTILPGHYKGQDLNIVSVFEAVGENAAGRMSDEDLLEIERRAIPGPGSC
GGMYTANTMSSAFEALGISLVYSSTMANPHDEKLNSAQESAKVLIEAIKN
DLKPRDIVTRKSIENAIAVVMAIGGSTNAVLHFLAIAHAAGVEWTIDDFE
RVRQKTPVLCDLKPSGKYLAVDLHRAGGIPQVMKMLLSAGLLHGDCITIT
GQTVAEVLKDVPDAPRADQNVIRPMNKPMYAQGHLAILKGNLAPEGCVAK
ITGLKNPVMTGPARVFEDEQSALAAILANKIVAGDVMVLRYLGPKGGPGM
PEMLAPTGALVGQGLGESVGLITDGRFSGGTWGMVVGHVAPEAAAGGLIA
LIEEGDSITIDAHQLLLQLNVSDDIIAKRRSVWTAPQPRYTRGVQAKFAF
NASTASKGAVLDNY
>Rfer_4053 FAD dependent oxidoreductase
MSHQADFIIIGGGIAAASVAYWLAPHGRVIVLERESQPGYHATGRSAAIF
MESYGTAQVRALTMASRAFLQAPPEGFSEHPLLSPRGALLVAAPGQEALL
AEKWDTMHTLIPNTQLLDRAATCALVPALRPELVAGAVYEPDAADMDVDA
LLQGYLRGLRRAGGSLICDAEVTALEHAGGRWRVQAGGVSYEAPVVLNAA
GAWADEVAGMAGVQPIGLEPRRRSAFIFAPPAEFTTAQWPMAIGMSEDWY
FKPEAGLLLGSSANADPTLPQDVQAEEMDVALGMYRIEEVTTLSIRRPTR
TWAGLRSFVADGDLVGGFATEPSGFFWVAAQGGYGIQTSAAMGEACAALV
RGLPLPEHIAAHGLSPEMLAPQRLLAQQAKALEVEAVSA
>Rfer_2916 diaminopimelate decarboxylase
MTLQNPPGQPHFAYRGNELFCEEIRLSDLVRAHGTPLFVYSKSAMLAALA
AYQRGFAGRNVQICYAMKANPALGVIQVFAEAGCGFDIVSGGDMDRVLAA
GGRAEKIIFSGVGKTRAEMRRALRAGIGCFNVESEAELEVLSEVALSMGV
AAPVSIRVNPNVDPKTHPYISTGLKDSKFGVAHERVLPTYQRAVKLAGVR
VVGIDCHIGSQITQEGPYLDAVDRMLDLVEAIEAAGIPLHHIDFGGGLGI
DYHGETPPDAGLLWQKLLARLDARGFGQRHLMIEPGRSLVGNAGVCLSEV
LYLKPGEQKNFCIIDAAMNDLPRPAMYQAFHQIVPLNRRPGAPDTYDVVG
PICESGDWIGHDRSLAVQPGDLLAVLSAGAYCMSMASNYNSRGRAAEILV
DGAQAYVIRQRETIADQMQGESLVGQMPTTLFI
>Rfer_3208 oxidoreductase FAD/NAD(P)-binding
MSTESLSPASGDELGRYVSASRTLDATRSQIDALEQTEAVETFHRQLALL
RRRLLSEPQAFRDIFIADGTEAMVWEFQQDELGPDFIRTLWALMLRDDDT
SKVLMRFVWNVPLKLKRKFVRAIDTHLSERYPMFKGLSQNWPAENFIPPS
MRDPLERSQDFGLVNQGYLGYMSQGYSAREVEMFVWLEALRDKQCEDKPC
ELGLRVAGQAEPKGGCPVKIHIPEMLELLGTGRFREAMELIENCNPLPNV
TGRVCPQELQCQGVCTHQKRPIEIGQIEWYLPQREKLVNAEGIAARFANI
PDPWAKADKPPVAVVGSGPAGLINAYLLASEGFPVTVFEAFHALGGVLRY
GIPEFRLPNDLIDDVVGKIKLLGGKFVANFVVGKTATLEDLKQAGFWKIF
VGTGAGLPRFMNVPGEHLLNVMSANEFLTRVNLMQGLHADYETPLPETRG
KRIMVIGGGNTAMDAARTARRLGGLVTIVYRRTQAEMPVRVEELHHAFEE
GIELKELRAPREFIGDDKTHFVTHSLLDVIALGAPDASGRRSPVSTGETE
SMTVDLVIMALGNTPNPIIKDSEPSLKTTKWGTIDVAPGSQQTSLPGVYS
GGDAARGGSTAIRAAGDGQAAAREIVGDINLTAHEITAMVRNAAHYTEMG
AAPQTILQKIHLADGIVEFIVHSPLVAKAAQAGQFVRVLPWEKGELIPLT
LADWDAKAGTICLVVQAMGASSIAINAMLVGDAFTGIAGPLGLPSELHRF
EGQQTVVFTAGGLGLPPVYPIMRAHLRLGNHVTLIAGFRNADLLFWVKAG
ERVSQLQAEFPDLLDVIYTSNDGSFCQKGFVTTPLEAMLKDGQTSQGRKI
AEVVTIGPPLMMRAVSDLTKPYGVKTVASLNSIMVDATGMCGACMVPVTI
DGKMVRKHACVDGPELDSHIIDWDKFLPRFNQFKPQEQASRVTHGFA
>Rfer_2380 Isocitrate dehydrogenase (NAD+)
MSNTIPATLIPGDGIGPEIVDATLAALDALHAPFDWDRQIAGLGGIQAAG
DPLPAATLDSIRRTRLALKGPLETPSGGGYRSSNVRLREEFQLYANLRPA
RTIIPGGRFDKIDLVVVRENLEGLYIGHEYYIPIDDDPRAVAMATGINTR
AGSRRLLEFAFEHAVATGRKKVSIVHKANIMKALTGIFLETGIDLYERKY
KGRFELETVIIDACAMKLVINPWQFDMLVTTNLFGDILSDLVAGLVGGLG
MTPGANIGADAAIFEAVHGSAPDIAGKGIANPIALMLAAAMMLDHCKLPE
LAARLRKAIDETLNLDKVRTGDLGGTASTAAFTKALVSRIGGGN
>Rfer_0733 threonine dehydratase, biosynthetic
MTTEHLKPADYLKKILTARVYDVAVESALEPAHALSQRLHNTVLLKREDQ
QSVHSFKLRGAYNKMAHLTPEQLKKGVICASAGNHAQGVALSAKRLGTRA
VIVMPTTTPRLKIDAVRGLGGEVVLFGDSYSDAHAHSVELQEQQGLTFVH
PFDDPDVIAGQGTIAMEILRQHQGRLDAVFVAIGGGGLISGVANYIKAVR
PEVKVIGVQMNDSDAMMQSIAAKKRVTLPDVGLFSDGTAVKLVGEETFRI
SRKLVDEFVTVDTDAVCAAIKDVFVDTRSIVEPAGALAVAAIKQYVAAHK
TKGETYAAILCGANMNFDRLRFVAERAEVGEEREALFAVTIPEERGSFRR
FCELIGNLPGGPRNVTEFNYRISEAAQAHVFVGLTTHGKGESIKIAANFS
RHGFAALDLTHDELAKEHIRHMVGGHSKLAQDERLLRFVFPERPGALLKF
LSLMRPGWNISLFHYRNQGADYGRILVGLQVPQADTADFDEFLDTLAYPY
VEETANPVYRMFLQS
>Rfer_1023 major facilitator superfamily MFS_1
MSRRSVRRLFAHRQFMRFWFARLAGVSANQMLMVGVAWHMYDITSSAWDL
GLVGLFQFVPALVLMLPAGHTADRFHRGRIFAACMGIQAVVALVLIFATQ
FHFASRELILGISVLLGVARAFQMPAQQALTPQLVPQDMLQSAVALSSSG
MQVAIIGGPALGGMLYTTGATTVYVTCALLLLVSAMLALLVRYQHQQAHL
AATWQTVLAGFTFVWHRKVLLGATSLDLFAVLLGGATALLPIYARDILHT
GPIGLGVLRSAPAVGALMMSLAIMRWPLTRHVGRRLLAAVAIFGVATIVF
GLSSHFGLSLVALAIAGAADSISVVTRSTLVQLETPNEMRGRVSAVNSMF
IGASNQLGEFESGATAALFGAVGSVVIGGVGTVLIAAGWFRLFPALARRD
RMGPTVAA
>Rfer_0266 ABC transporter related
MKPPVLTVKGLRAGYGRAEVLHGIDLQAFQGSVITVIGPNGAGKSTFLNA
LMGVLPAQGQIEFEGQPINTLSLEERVMLGIALVPEKRELFGSMSVEDNL
VLGAFRQVRLRNPKWREQMDVVFDLFPRLKERRTQAAGTLSGGERQMLAV
GRAMMSRPTLLMLDEPSLGLAPLVVKEIFRTIDTLRKTGVTTLLVEQNAR
AALEAADDGYVLEMGEIALHGPAQDLATDPRVIDTYLGAARKKDTATRP
>Rfer_2128 extracellular solute-binding protein, family 5
MQNCRMRRLFFLCLSVVCNPLWAAHGYALWGDLKYGANFSHFNYVNPNAP
KGGELRLVSNLRVSTFDKYNPFTIKGSAPAYLADLMFDSLLTGALDETGA
GYGLLARDVDVAPDGLSATFRLAPEARFHNGDPVLAQDVKYSFDTLMGPY
TSPAYKSLLEDVAGLEVLDERTVRYRFKKPNRELPLTVGGLPVFSRAWGR
VNGKLKSFDQIVTDIPIGSGPYKIGPVRFGKDITYVRDPNYWARDLNVKR
GSNNFDRITVKIYKDGTARLEALKAGEFDLMRFFSAGDWARRVNGKRFDT
GELVKAEFKHRLPTGFQSYVLNTRRDKLKDIRVRQALGLALDFEWMNRQM
FYNAYQRVNGLFGNTDCQASGMPSVQELALMTPWRQDIPPAAFGLMAVAP
RTDGDSSLRANLRQAQSLLKAAGWEVRDGALRNAQGQAFEIEYLDSNESG
ARMASPWARNLEKIGISLSFRPVDFALYQQRLQKFEFDITSIAYGGTHNP
GQEYADMFGSKAADQEDSGNFAGVKNPAVDALISAMTSARSKAELLPACR
ALDRVISHSHFLIPQWSAGTHRMVYNSWRLAKPESMPPYAAGEGWAIDTW
WAK
>Rfer_1016 ABC transporter related
MSELLLSASHLAVNIQLMPALRDLNVQIREGEMVGLMGRNGAGKTTFMRT
VMGHLPPTSGRIEFRGESLDQHARHERAALGIGYMPEDRGLVPQLTVEEN
ILLPIWVSKTLNREDRLAFVYGLMPEVADMRARRALQLSGGQQKLVALCR
ALAVGTRLLLLDEPFEGVAPALSMRLADVIHQLKGSKLAVLISQSDVNHS
GNLFDHSFVIERGANSVVEAQEVA
>Rfer_3797 translation elongation factor Tu
MGKEKFSRSKPHVNVGTIGHVDHGKTTLTAAITSVLAAKFGGTAKAYDQI
DAAPEEKARGITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMD
GAILVVSAADGPMPQTREHILLARQVGVPYIIVFLNKCDMVDDAELLELV
EMEVRELLDKYEFPGDTTPIIHGSAKLAMEGDKGPMGEQAIMKLADALDS
YIPLPERAIDGAFLMPVEDVFSISGRGTVVTGRVERGIIKVGEEIEIVGI
HDTQKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREDVQRGQVLCKPGS
IKPHTHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGAIELPEGK
EMVMPGDNVSIIVKLINPIAMEEGLRFAIREGGKTVGAGVVAKVIA
>Rfer_0454 pyruvate carboxyltransferase
MTVKGKRITVHDMTLRDGMHPKRHQMTLDQMKAVATGLDAAGVPLIEVTH
GDGLGGASVNYGFPAHTDEEYLGTVIPLLKLAKVSALLIPGIGTVDHLRM
AKDLGVHTIRVATHCTEADVSEQHISLARQLEMDTVGFLMMAHKADSQRL
ISQARLMESYGANCIYITDSAGYMLPAEVKEKTSAVRAALRPETELGFHG
HHNLAMGVANSVVAVESGATRIDAAAAGLGAGAGNTPMEVFIAVCNRMGI
ATGVDLFKMQDVAEDIVVPMMDHPIRIDRDALILGYAGVYSSFLLFAKRA
EKKYGVSAREILIELGRRGMVGGQEDMIEDAAMTMAKARGPI
>Rfer_4063 inner-membrane translocator
MDWAYLFEISLTGIASGGLYALAALAFVMVYKATRVVNIAIGEMLMVGAY
LFFTFAVTFALPIWLAIPAAVLGAGLLGAVIERTMIRPLLGEPPISVFMV
TVGLASVLVGLVEIIWTADQRRLPDFLPNTPVMVGDAFLAPKVFYGALIA
VVLIAVVLLVFRFWRGGVALRATASDPAAAYSMGINVPRVFSLAWVVSAM
LAAVSGIIVGSIGGISSSMGVFGLSVLVVVIVGGLDSVLGALVGGLLIGL
VEALAGTYLGGEYKLLVTFIVLVIVLMIQPYGLFGTHEIERL
>Rfer_1950 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like
MSPSETPVVVARDLRQVYKISRGFLHAADQLQAVSGVSFTLHAGKTLAVV
GESGCGKSTLARMVSLIETPTAGELRLNGVDVVKASTTERHALRRAVQLV
FQNPYGSLNPRKKIGAILEAPLEINTELTAAQRAEQARAMLALVGLRPEH
YDRYPHMFSGGQRQRVAIARALMLRPAVIVADEPVSALDVSIQAQVLNLL
ADLQQELGLAYLFISHDLGVVRYIAHDLLVMYLGHAVEQGEKKTIFAQPL
HPYTQALLASTPGIIGSGTAHKRIVLTGELPSPLNPPSGCVFSTRCPNVV
ARCHTERPVLRELAGRQVACHEAEQFIQPAAEQH
>Rfer_0785 putative spermidine synthase
MNTTTVPLSREPASSASVPNRQVRVLCVLFFFSGFPALIYQLVWQRALFR
IFGVNIESVTIVVTAFMLGLGLGGLAGGWLSKRRGIPLLLLLATIETLTG
VFGLFSLSIFERVGDIVLGAPLPLTALVTLALVIVPTLLMGATLPLLVGH
LVRRSGNVGASVGQLYYVNTLGAGAACLACAVLLFPLLGMQGSVLVAVAF
NAAVALGAVAAHTADRRNMPHTLTDSNPTRSTAASRTSLPFAVVLAMSCV
GGLVSLSYEIFFFRAMSYASGSSSFAFATTLGAFLVGLASGARLGGEACN
DVDGDVLLHRMLRSLLAASLIGFAFLPVLGHLAWLDRAILGVGLLFVYLL
ARQWGLVLPCLAHLGVAADAQAGMRTGLLYLANILGAATGSVLTGFILMD
HLSLVQVGQLLVAAAFGCALILGLAITASRGIKFRRSSAIAVVAGLAVLA
LPAASEKVLESLQWKGAPESKTPFAAVVENRSGIVTVDRTGTVFGNGAYD
GHFNVELTYDVNGIVRPYALSLFHAAPRDVLMIGLASGSWAQVLTNNPEV
DSLTIVEINPGYVGLIAANPSVRSVLTHPKVTLVTDDGRRWLRMNAHRHF
DAIVANTTYHFRSNATNLLSVDFLTLVKAHLNPGGILFYNTTDSSRVQRT
GCTSFAHGARFTNHLVLSMTPIDWNFARWRRTLEAYRIDGRPMLNPARAE
HAQGLARLMALESQTHPDGAHAAGEWIEHCAQVLARTAGQDLVTDDNMGT
EWRHVWEKQ
>Rfer_0597 agmatinase, putative
MAPKNQPLSGNAMPRFGGIASMLRLPVSSSPEGLDAAFIGVPLDIGTSHR
PGARFGPRQIRAESALIRPYNMATGAAPFDTLQVADLGDVPINTYSLTKS
LPIITNFYRTVLEAGCTPLTLGGDHTIALPILRAMAAKHGPVALVHVDAH
ADVNEEMFGEPVAHGTPFRRAVEEGLLDCHKVFQIGLRGSGYASDDFDWP
RQQGFTLVMAHEVWYQSLAPLMANIRAHIGQTPCYLSFDIDGIDPAYAGG
TGTPEIGGLTVPQALEIVRGCSGLNLIGCDLVEVSPAYDVSGNTALLGAN
LLFEMLCVLPGVLRR
>Rfer_1536 Drug resistance transporter Bcr/CflA subfamily
MPARPATPVAAAMPPGLVILLLSLLLGLQPITTDLYLPALPALTAGFGAP
MAQAQLTLSALLLAFGLSQLVWGSLSDRFGRRPILLWGMAGYVLASIAST
LAPSMVMLIVWRTVQGAAMGAGVMCARAIVRDLYTPLQGARVMSKGLSGL
GVIACLSAPLGGLLAGWFNWRVALLALAVFGAVCLALIAWRFSETLAQKN
RQALHAAILARTWMTIVRNPTFVAFSALSAASYGGLFTFLAASSFVFIQV
LGWRTSTYGLLMFSNALAYLLGTFLCRYWLARFGVRRSVALAGALSLSGG
TLMGVMALTGLHNGWALMLPQYLFMLGHGVHQPCSQSGAVGPFPQAAGAA
SALNGFLMMITAFAMGGWLGTHMDGTVRPLALGVWFWSVLIALAAWTLVQ
RQGQHDEH
>Rfer_1636 dihydrodipicolinate synthetase
MNKLSASAKGAYLIAITPFTENGALDLASTDRMVDFYLAKGASGLTILGI
LGEATKLTAEESKLFTKQVLQRVNGRVPVVVGASSAGFAPMRELTQSVMA
LGASGVMIAPPASVRTDDQIVAYFDMVNETLGSDVPWVLQDHPVSTGVQM
STGVILRIVKNSSTCVMLKHEDCPGLAKLSAIRAASDRGDARRVAILTGN
GGGLFLPEELTRGADGAMTGFAYPEMMVDVITAHAAGEIEKAHDIFDAYL
PLARYEQQAGIGLAVRKHIMAQRGVIACATLRKPGLRLSNSDMADVARLT
ERQTRRLQELQ
>Rfer_1857 binding-protein-dependent transport systems inner membrane component
MSGAAPVSASGRAWARDPLPWALAALLLLVFGMAWLKPLFAALFPALERP
VYAQDSFLGLTLAHLKIVGLSSGFAVIVGVAAGIFATRASGREFRPLIET
VVAAGQTFPPVAVLAVAVPVVGFGEAPALIALALYGLLPVLQSTLAGIAS
VPPAAREAAEGLGLSPWQRLLRVELPLAAPVILAGVRTSVIINIGTAAIA
STVGAKTLGLPIIVGLSGFNTAYVLQGAVLVGLLAVVTDLGFERLVQRLG
RWQSAQ
>Rfer_1837 inner-membrane translocator
MEIFLQLIYSGIALGMIYGVIAFGYQLTFATSGTLNFGQGESLMLGALVG
LSLVGTIHGGPYLNYWLMIPLVALFGAAQGAFVEWIGVRPAIKIKSEFGW
IMSTIALAIIFKNVAENIWGKDDLKFPSPLPEAPIKFLGANVLPMEIVVV
IGALAMMAMVELFNRKSIYGKAVVATSNDRDAASLMGINTGAVITFSYAL
SSVTAAVAGVLVAPLTLTGATMGSVLGLKAFAVAIIGGLTSGVGVIVGGL
ILGIAETTTGYYISTGYKDVPGLVLLLLVLAIKPAGLFGKMAIKKV
>Rfer_3237 protein of unknown function DUF6, transmembrane
MAFWRTQQGAGIALIVLATLAFAILDTVTKYAVTLVPVLMLLWFRYAFQA
LLTFVLRFPVQKRRLFRTPNPRFQTLRGVLLLITSACSFFGLRYLPVGEF
TAMVMLSPLVATAMAAWVLKDHVSHQRWLLMAAGLVGVLLVVRPGGQVFS
WALLFPVLLVTTYGWFQVLTSRLSGEENPYTTHFYTGLVGAVVMSPIVVF
NWSTTALLTYWPWFLLVGFSGTFGHLMLIRAYTRASAPVLTPYLYTQIAF
ATVAGWLAFKHVPDALAWLGIAVIAASGVGNALLSAHEVTKLRRAVAPAA
>Rfer_3021 glycine dehydrogenase
MIEPAMPTTSTPSLSELENPSEFIARHIGIDAADEAVMLRAVAATSRGAL
IDAIVPRSIARSQPMDIPAPITEAAALAELKAMAAKNKVFKSYIGQGYYG
THTPGVILRNILENPAWYTAYTPYQAEISQGRMEALVNFQTMVMDLTGMP
MANASMLDEATAAAEAMTMAQRASKSKSTTFFVDVEVLPQTLAVIKTRAE
PLGIEVKTCKGDEALGQDSFAVLLQYPGVSGVVRDDREWIKAYKAKGGIV
IMAADLLALTLLTPPGELGADIAVGTTQRFGTPMGNGGPHAAYMACRDEY
KRTMPGRLVGVSVDVHGNPAYRLALQTREQHIRREKATSNICTAQVLPAV
VASMFAVYHGPAGLKRIAQRVAALTAVLAQGLLALGYKTANTSAFDTLTV
NTGDATNSIASNALSKGANLRFASNNSLSVSLDETSTRVDVEALWRFFAK
PGQTVPQVSDFEQAANTLLPAALLRTSSYLTHPVFNTHHSETGMLRYIRR
LSDLDLALDRSMIPLGSCTMKLNATSEMIPITWPEFADIHPFCPANQREG
YAELDEQLRAWLCQATGYAGISLQPNAGSQGEYAGMMAIRGYHAARGQSQ
RNICLIPSSAHGTNPASATMAGFKVVVTACDANGNVDMVDLKTKCEQYSA
NLGAVMITYPSTHGVFETSVKDLCALVHSHGGRVYVDGANMNALVGLAAP
GEFGGDVSHLNLHKTFCIPHGGGGPGVGPVCVVADLVPFLPAHADANGIG
PVAAAPLGNASVLPISWMYCRMMGAEGLKAATEVAILSANYISVRLKDHY
PTLYTSSPEDGKPGRVAHECILDLRPLKETSGGVHGVSAEDVTKRLMDYG
FHAPTLSFPVPGTLMVEPTESETLDELDRFINAMIAIREEIAKVEQGLWP
QGNNPLSHAPHTAAALLGEAWDRPYSRELAAFPVPSLKSSKYWVPVGRID
NVHGDRNLFCRCVPVKD
>Rfer_3322 acetolactate synthase, large subunit, biosynthetic type
MELSKARIASAAAKTAATSQTPTTPVKQLVATPDENELRGAEILIKALQA
EGVKYVWGYPGGAVLHIYDALYKQDTIQHILVRHEQAAVHAADGYARATG
EVGVALVTSGPGVTNAVTGIATAYMDSIPMVIVSGQVPTSAIGMDAFQEC
DAVGITRPVVKHNFLVKDAHQLAETMKKAFHIARSGRPGPVLVDIPKDVS
FKKVHYAGYPATLEMRSYNPVRKGHGGQIRKALQLLLAAKRPYIYTGGGV
LLSNASAELRTLVDMLGYPCTNTLMGLGAYPASDKKFLGMLGMHGTVEAN
NAMQHCDVLLAIGARFDDRVIGNPKHFAQNERKIIHIDIDPSSISKRVKV
DIPIVGDVKEVLSEMIAMIKEGAVKPDADALGAWWDTIEGWRKRDCLKYD
HGKNDVIKPQFVIETLWKMTKDADTYITSDVGQHQMWAAQYYRFDEPRRW
INSGGLGTMGVGIPYAMGIKLAKPDSEVYCITGDGSVQMCIQELSTCLQY
NTPIKILSLNNRYLGMVRQWQEVEYEGRYSHSYMDALPNFVKLAEAYGHV
GMLVERAQDVEPALREARKLKDRTVFMDIRTDPTENVFPMVKAGKGITEM
LLGSEDL
>Rfer_0213 inner-membrane translocator
MDLTTFLIQCLNALQYGLLLFLVASGLTLIFGIMGVINLAHGSFYMIGAY
MAYALAPIVGGTFSGGFFATLAVGLVLAVLLGYVLEWAFFSFLYERDHLQ
QVLMTYGLILVFEELRSLLVGDDVHGVQAPDFLAGTLPLGELMTYPVYRL
FISGVCLVLALAMYFVFTRTRLGMMIRAGSANREMVQSLGIDIKFLYRVV
FAAGVAIAVFAGMIAAPVSSVYPGMGNTVLIICFVVVVIGGIGSIRGALL
AALLIGVVDTFGKVLLPQASGVLVYVLMALILLVKPDGLFKAG
>Rfer_2443 major facilitator superfamily MFS_1
MNSLEPTSPARPASESHRQNGTNQAAVLTIIVTSYLMLVVDISIVLTGLP
NIQAELGFSHAELSWVQNAYTLAFGGFLLLGARAGDILGRQRMFIAGLTL
FTAASMAIGLAPSPTWLLLGRAIQGVGAAILAPSTLALLSIHFAQGHERT
RALALYAAAAGVGASLGLVLGGLVAQVISWRVGFFINLPIGIALILGAKR
YLVETPLKSGQLDLAGAVSSTLGMSVLVFGIVRSAELGWGDSVTTAALVA
GLTLLTFFVIHESGASEPILPLHLFANRERSAAYAARMLFLGGMVGFWFF
TTQFLQGVLMYKPLHAGLAFLPTTIPNFVAAVLVPRLTRKFGNARLLAVG
LVFAIVGMAWIAQISEHSPYITGIALPMILIGMGQGFALAPLTVAALTDV
ASEDAGAASGLVNVAHQLGGSLGLSVLVVVFATGGSVAMDASGQLAHHIA
NTFTASAVMLSISLVLVLSFIVRPRTQLCPQ
>Rfer_3016 putative transmembrane protein
MLKGILAGLAAGALWGLVFVVPRMTPGLSSVDLTAGRFVSYGLMSALSMA
FTWANHKLPTARQAVTALGMSVLGATGYYLLLALAIGRAGTEVPTLIIGT
IPLWVMLLGKPLGLKWSSLLPGLLLTATGLLLMMNATFTAHSAGALAIEP
DGTQFWSGVALATAAMLCWTAFAILNAAWLKRHPEVSATEWTNWLGMATG
VGAALLWLLAGSESKAMLALDQPVRAAIICIVTGVGSAWAASILWNIASQ
RLSVSLCGQLIVSETLFALCYSFLWDQAWPGALQLLAAVLFTLGILASIR
AHR
>Rfer_0985 extracellular solute-binding protein, family 5
MNRKSFSLAVLAAAVAVSVTTLHAQTLGGNAIVAITQAPPTLDAQVTTIQ
SARHINLHIYETLYARDENGKPVPDLAESVAISPDGKTYTLALRKGVKFH
NGKTMGSADVVASLERYRKIGANANLLSEVETISAKGPNEVVIKLKKVQS
TLLDTLSSSTAPLAIYPAEEAAKGANKIAYIGTGPFKFVEFIPDSHVKLE
RFKDYVPNPHYTKRDGFAGKKEVYLDTVTFRFMPEAGARVAALQSGEVQL
VETVDGPTKKRLETNPAFKIYKLLPFSFQIIKLNHAVPPTDNLAFRQAVV
ATLDMEEIMSIAYPDIYQLDGGWLYPKSPAYVGVGLNTYNKPDLKKAREL
VVKSGYKGEKITFLVDNLRANTDTATVVQQRLAQIGVNVDIKVTDWPTAV
KIGWSPEGWNLFAHGFGIQPFEGPGTVMSAWAGGQLHQKPDAEIDRLYAA
YSGELDAEKGKTLFASFQQHMINDVIAIKVGNYGLFQVGTAKLRNFEPYR
IPRMWGVWLDK
>Rfer_3400 urease, beta subunit
MIPGELFTDGPEHVLNPGRRAHTLAVVNASDRPIQVGSHYHFAETNGALG
FDRAAAKGMRLNIASGSAVRLEPGQQRTVELVDYAGDRIVYGFRGLTQGA
L
>Rfer_1261 Serine acetyltransferase-like
MNDALKMNTAEDFRLLTYLAADLRRARVLLNGSADGVSGLRLWLGVLSPR
FVPVLLCRLAHSFYRLKLGLLAKAVSLLNFFLFGIEIAVRCPIGKGLFLP
HTQGTVIGAWSIGENVTIFQGVTLGAKELDFSYQESSRPTVGDGVTIGAG
AKVIGGLVLGSDSRVGANAVVLNDVAPGSLVVGIPAKVVDRSGA
>Rfer_1521 ABC transporter related
MTTSTLKLQAENIHKRFGSVEVLKGVSLTAHAGDVISIIGSSGSGKSTFL
RCINLLEKPHQGRIVVAGEELKLVPGANGELGASDPKQLQRMRTKLAMVF
QHFNLWAHMTVLQNIIEAPVHVMGVPRDQAVEIARKYLKRVDLAGMEDRY
PAHMSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVSEVLKVMKNLA
LEGRTMVVVTHEMGFARDVSNHLIFLHKGLIEEEGKPAQVLANPKSERLA
QFLSGSLK
>Rfer_1003 inner-membrane translocator
MNEFLHQLVAGLATGGIYASVALALVMIYQATHHINFAQGEMAMFSTFLA
WALMQAGLPYWGAFALTVVISFVLAAVIEFVVIRPMHEAPELSVVVVFIG
LLVIFHSLAGWLFGYTIKQFPSPFPSNAWYGSELMSAHQVGAILVALVMV
ALLFSFFSFTSIGLALRAAAQNAPSSRLVGINVGRMLMLGWGLAGAIGSV
AGMMVAPVVFLDPNMMTGVLIYAFAGALIGGIDNPVGAVLGGFIVGVLEN
LIGTYVVGTELKLSVALVLIVGVLIVRPSGLLGRKIVTRV
>Rfer_1710 argininosuccinate lyase
MSHNQFDKKSQAWSALFSEPMSDLVKRYTASVFFDKRLWQADIAGSLAHA
DMLAAQKIISSEDHNAIQSGMATISAEIESGAFDWKLELEDVHLNIEARL
TQLIGLAGKRLHTGRSRNDQVATDVRLWLRGEIDLIGALLTDLQKALLEV
AEKNVEVILPGFTHLQVAQPISFGHHMLAYVEMFSRDAERMSEVRRRTNR
LPLGAAALAGTSYPLDRERVAVSLGMVDEKGHPCVCQNSLDAVSDRDFAI
EFTAAASLCMVHISRMSEELILWMSQNFGFIKIADRFTTGSSIMPQKKNP
DVPELARGKTGRVVGHLMGLITLMKGQPLAYNKDNQEDKEPLFDTVDTLK
DTLRIFAEMIGGQLNPATGIKEGGISVNPQAMEQAALKGYATATDLADYL
VKKGLPFRDAHETVAHAVKAAITHQVDLSELPLAVLQQFNPGIEKDVYEV
LSLRGSLNARDILGGTAPNQVRAQIARHRARLG
>Rfer_3107 peptidase M55, D-aminopeptidase
MKVLISTDIEGVAGVYHPEQVRVGNPEYERARILMTHEANAAIAGAFDGG
ATKVLVNDSHGGFRNMPPDLLDPRAQAVQGKPRYLGMVAGVDEGVDAVCM
IGYHSRAKGRGILAHTINSFAFARVYVNDLELGEAGIYGALAGEYGVPVV
MASGDDVFIEEHRPVFPHATFVQTKRATGHTSGVSLSPAQACSAIRESVA
AALMRHSTARPFVLAGPIAVRIQTQTTALADLFCQWPTLRRLDGDEVGFD
APTVEAAVRMINSLSAMSTMLR
>Rfer_2946 Histidinol dehydrogenase
MPITATAVRLSTASSTFEADFKARLHWSAAADAAIEQRVADILLDVQHRG
DAAVLEYTQRFDALNAVTLAELELTQAELKAAFEAIPAVQREALQAAAAR
VRSYHEAQKKACGESWSYVDADGTLLGQKVTPLDRVGIYVPGGKAAYPSS
VLMNAIPAHVAGVGEIIMVVPTPKGEKNALVLAAAYVAGVTRAFTVGGAQ
AVAALAYGTQTIPKVDKITGPGNAYVAAAKRRVFGTVGIDMIAGPSEILV
LADGSTPPDWVAMDLFSQAEHDELAQSILLCPDLAYIELVQQSINRLLPD
MPRREIIAKSLNGRGALIHTRDMDEACAISNAIAPEHLEVSSRDPQRWEP
LLKHAGAIFLGAYTSESLGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRS
SLIEVSEAGAQTLGLIAAELAYGEGLQAHARAAELRLATVPPMRMNP
>Rfer_2390 inner-membrane translocator
MEFYTISLLNGISYGMLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFA
YTVTSLIGFWAALLVAPVLVGLVGAAFEKYFLRRVHKFGHVPELLITFGL
SYIILELVQLVWGRSSVDYRVPVALDGPLFTLFGTQFPMYRGFMMGVALL
MLMAIWLLLTRTRIGLVIQAALTHPEMVEALGHNVPRVFMLVFGGGCALA
GLAGVIGGNAYVTEPSMAFSVGGVIFVVVVVGGMGSLAGAFLASILIGVL
QTFAVAIDASLMSALQTVGVTLTPSTFGYALWKLKLSQVAPILPYLFLVL
ILIFRPKGLLGTREG
>Rfer_0371 Extracellular ligand-binding receptor
MKLAISYPMSLRLTAAAALGLTTAVAFAQDVQIVRIAHAGPTSGGIAHIG
KDTENGVRLAIDELNAQALVIGGKKIKFELAAEDDAGDPRQATTVAQKLC
DSHVAGVVGHLQSGTTIPASMVYNKCGLPHITAAATNPDVTKHGYPTTFR
LIANDNALGAALAYFAHDALKLKTVAVIDDRTAYGQGLADVFKATAQQKG
MRIVAEEFTNDKATDFMAILTAIKSKKPDAIFYGGLDAQAGPMLRQMEQL
GMSNVRYFGGDALCTEKLPELSSKAGTLKNVTCATGGASVQKMQGGAAWK
KKYDARFPGQFQIYSPYAYDATFVLADAMKRANSVDPKVYVPFIGKTHYK
GVTANIAFTSKGELTQPSVTLYTYKDDVRAALN
>Rfer_2879 putative transmembrane protein
MQALWMVWGSFFFATMAVGIKIASSEFNLFELVFYRGVVSVIFMALVLRA
RGTPLRTPVPMMHAWRTLIGVLSLGAWFYAIAHLPLATAMTLNYMSGVWV
AAFIVGGALLYGQAQRQGPLMATVLMGFAGVVMMLRPTLDQNQLFAGLIG
LLSGLGAAMAYLQVTALGKVGEPEGRTVFYFSLGSAVVGLVGIAFTGLTP
WTAVSWQTSIWLIPIGVLGALGQWCMTRAYSRGSTLLVANLQYSGIVFGA
FYSLVLFGDQIPLLGWAGMGVIVASGLLATVLRTRALPDTPAEVH
>Rfer_3575 peptidase M14, carboxypeptidase A
MTPLHISTQFDAGAIEVLSLADPQDIQLNIRRDNASDFAQWFHFSLQGAA
GVALSVRFLNAGQSAYPKGWAGYRAVASYDRQRWFRIDTQFDGQVLSFDF
TPETQCIYFAYFEPYSYERHLDLIASVARCGHVTQERLGGTLDGRDMTLL
RITDATAATSLAQKKKVWLIARQHPGEAMAEWFIEGFLQRLLDPADPVAR
VLLDKCVFHVVPNMNPDGAVRGNLRTNAAGANLNREWAAPSLEKSPEVFL
VRQKMQQVGVDLCLDAHGDEALPYNFVAGCEGNPGYTPRLEALENSFKAA
WLATCPDFQTAQGYGQTPLGQANPTLATNWVGQNFDCLALTIEMPFKDNA
NLPDVRVGWNGERSKKLGASVLLPLLAVVDQLR
>Rfer_2004 carbamoyl-phosphate synthase, small subunit
MQAKSSILSGRGRTRKPLPENPVLLSLQGNVPPAILALADGTVYVGHSIG
AAGSTVGEVVFNTAMTGYQEILTDPSYCQQIVTLTYPHIGNYGVNFDDVE
ADKVHVAGLVIKDLPLLASNFRQTMSLGDYLVREGTVAIANIDTRKLTRQ
LRSQGAQNGCIMALAQGEAVTQSLIDKAIALAQAAPAMAGLDLARVVTVK
EPYAWTQTEWRLSQPVLGGKPGYGELTKPKFHVVAYDFGIKKNILRMLAE
RGCRVTVVPAQTPAFDALKYQPDGIFLSNGPGDPQPCDYAIAAVAELIES
GIPTFGICLGHQIMALASGARTFKMKFGHHGANHPVKDLDSGRVSITSQN
HGFAVDENMLPTHLRATHISLFDGTLQGLERTDKPAFCFQGHPEASPGPH
DIGYLFDRFLLAMEHRA
>Rfer_3161 Chorismate synthase
MSGNTFGKLFAVTNFGESHGPAIGCVIDGCPPGMTLSVTDIQPDLDRRRP
GTSKFVTQRNEPDAVEILSGVYEGKTTGTPICLLIKNTDQRSKDYGNIVQ
TFRPGHADYTYYQKYGIRDPRGGGRSSARLTAPMVAAGAVAKKWLFEHYG
TVFRGCMTQIGELPITFESWDFVPDNPFFAPIADVSALASYMEVLRKAGD
SCGARIRVSASNVPVGLGEPLFDKLDADIAYAMMGINAVKGVEIGAGFAS
VAQHGSSHGDSLSPKGFKSNNAGGVLGGISSGQDLELSIAIKPTSSILTP
RESIDMAGQSTEVITKGRHDPCVGIRATPIAEAMLALVVMDHALRQRAQC
GDVTVNLKPIKASI
>Rfer_3887 cobalamin B12-binding
MLETKRPEQWVKPYGDTLGDGRVQLSFTLPVALDETSKEGAKRLAAMMGL
SDPAVVHCEDMGQGFSFYVVYGQCRHQVDLSSFQVVKPDYEVMDKEAINA
LIAEKMGRRMVVVGATIETDAHTVGIDAIMNMKGFNGHKGLESYHEIRAI
NLGAQVDSEVLVARAIEEKADVILVSQVVTQKNIHLDNLTKLSDLLEAEG
LRDKVILVVGGPRISHELAKELGYDAGFGSKSYAEDVASFAIHEWIHRKA
A
>Rfer_0960 major facilitator superfamily MFS_1
MRPLPLIIVLLVLDHVAFNGSRIAVSLFAIQQHSSALTVGSLIALYALLP
ALLSVAAGRWIDRIGINRPMLVGSIGICLGTLAPAVLPQLAALYITAVLV
GVSFMLINLAAYHAVGEMSRPADRTINFSYVAMGFSTSAFVGPMLTGVCI
DNLGYRSTFLVLALFTVLPIIALSAKLLPNAAPRAAQDRGVNGQVFDLLK
NPALRRLFFAMAVLTVGWDVYNFAIPVYGTYIGLSASQIGIVMGAFAAAT
FTVRLAMPLIMQRMHPWGLLSASLLMAGLAYLAMPFTHSVGLLMVITFVL
GLGLGAPQPMVLTLLHQFAPRGRAGEVLGLRTTLINTSQTVMPLLFGAVG
ATFGMPPLFWAMSAALLGSCEFARRAGKRRP
>Rfer_3324 ketol-acid reductoisomerase
MKVFYDKDCDLSLIKGKTVAIIGYGSQGHAHAQNLNDSGVKVVVGLRKGG
ASWTKVEKAGLKVAEVADAVKAADVVMILLPDEHIAAVYTEDIEPNIKQG
ASLVFAHGFNVHYGLVTPRADLDVWMVAPKAPGHTVRGTYVQGGGVPQLI
AIHQDKSGRTRDLALSYAMANGGGKAGIIETTFREETETDLFGEQAVLCG
GTVELIKAGFETLVEAGYAPEMAYFECLHELKLIVDMIYEGGIANMNYSI
SNNAEYGEYVTGPKIITSASKDAMRQCLKDIQTGEYAKSFILENKAGAPT
LLSRRRLTSEHQIEQVGEKLRAMMPWIKKNKLVDQTRN
>Rfer_3381 twin-arginine translocation pathway signal
MQRRFTLKALTAAVALTTLSSLPAFAADTIKVGVLHSLSGTMAISETVLK
DTVLMAIDEINAKGGVLGKKLEPVVVDPASNWPLFAEKTKQLLGQDKVAV
IFGCWTSVSRKSVLPVLEEMNGLLFYPVQYEGEELSKNVFYTGAAPNQQA
IPAVDYLMSKDGGAAKRWVLLGTDYVYPRTTNKILRAYLKSKGVKDTDID
EKYTPFGHSDYQTIVADIKKFSAGGKTAVVSTINGDSNVPFYKELGNAGL
KAKDVPVVAFSVGEEELRGVDTKPLVGHLAAWNYFMSIKNPTNTEFIKKW
TAYAKAKNLPGADKPLTNDPMEATYIGINMWKQAVEKAKSTDVDKVIAAM
AGQTFKAPSGIVSKMDEKNHHLHKSVFIGEVKADGQFNVVWKTPGPVKAK
PWSPYIEGNAGKPDEPVKK
>Rfer_0482 phospho-2-dehydro-3-deoxyheptonate aldolase
MTFPSAFENLNVLSQHTLLSPAQLHDDVPASVRATQTVTTARQAVASILS
GRDPRLLVVVGPCSIHDIAAAKDYAQRLKALADELADQLFIVMRVYFEKP
RTTVGWKGLINDPHMDDSFDIEEGLHIARRLLVELNDMGLPCGTEALDPI
TPQYLGDLIAWSAIGARTTESQTHREMASGLSSPVGFKNGTDGDLDVALN
GMLSAAQPHAFLGINGDGQVALTQTRGNAFGHLILRGGAVPNYDSVAVAQ
AEAALRAAKLPVNIVVDCSHANSRKNHALQTLVLKDVVGQILDGNRSIKG
VMLESNLFEGNQKLARPQDLRYGVSITDACLGWDSTAASLREAAERLRTM
PR
>Rfer_1613 selenide, water dikinase
MQAPEQPILRDIVLVGGGHSHVGVLKSFGMQPVPGVRLTVICTDMHTPYS
GMLPGYVAGHYDYDEVHIDLSRLAVFAGARLYRDEVIGLDRVNRKVLCRN
RPPVPYDVLSINIGSTPQLHGVPGALENAIAVKPITRFNERWLALLERVQ
RHPGTTTVAVVGAGAGGVELLLAMQWRLRHALRALGRNPDELVFHLFSSD
ANILPTHNLGVRRRFDAVLAERQVRVHRNAAVTQVTPGRLQTAAGEVIDT
DEIVWVTRAGGAAWLRDTGLALDADGFIQVTDTLQTVTDPAVFAAGDIAS
MVNHPLEKAGVFAVRQGPPLAANLRLSVQGGTLKPYHPQRSWLALISTGD
RYAVASRGWLGFAGAWVWRWKDWIDRRFMAKFQDLTPMDTHGTRAQPTSA
GVAGTVQLTPEESLQAISAIAMRCGGCGAKVGATVLSRALSQLHPVQRED
VIIGLSDPDDAAVVRVPAGKAMVHSVDFFRSFIDDPYLFGKVAANHALGD
IWAMGAQAQSATAIATVPSGLESKVEDVLFQMMTGALEVLNEANCALVGG
HTGEGKELALGFAINGLIDDDPAQILRKNGMCPGDVLILTKPIGTGTLFA
AHARLSAKGRWIDAALQSMVVSNQKGAQCLREFGATACTDLTGFGLLGHL
VEMTRPSGVDAELDLGALPLLDGAQECVAAGIVSSLQSANVRLRRALRNQ
EAMVNHPRYPLIFDPQTAGGLLASVPADKAQACIAALRELGYSHTVAIGR
VLPQGEALEPISLCA
>Rfer_2882 glycosyl transferase, family 3
MGIGNYIKIIGRGKDGARALTREQAADLFGQVLDGTVTDLEIGAFCLAMR
IKGETPQEMAGFLDATAARLRPIPSHGRTVVVLPSYNGARKLPVLTPLLA
LLLAREGLPVVMHGASTENARVSAQNILAALAVPSQDAIYSIAEGELQFV
PTALLCPGLQRLLEVRRVVGLRNPAHSLVKLLNPCDSPALIVSSYTHPEY
AAAMTATFQLMQGQALLLRGTEGEPVADPRRTPAMDAIAHGQVTRVQEAQ
GGTLASVPGLPTPDVASTAAWIQAVLNGEQPVPAPIALQVAHIVHLAKPT
RTTA
>Rfer_3502 ABC transporter related
MSDTPPPISDQPVLKLLNVESAYGPIKAIRGVSLQVRRGEIATVLGSNGA
GKTTILKTISGIIDPRKGSIEFKGSDITAQDPAYIVQQGLSHVPEGREVF
PLLSVHDNLLMGAYTRKDSDGVAKDMEGVYNYFPILRERANQNAGLLSGG
QQQMLSISRALMANPDLILLDEPSLGLSPKLTKEIFEIVVRINRERGTTI
LLVEQNANMALNASDYGYVLENGRIVMEDTCARLREKDDIKEFYLGLKED
GVRGERRWKKKKTWR
>Rfer_0982 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like
MTQPVLDIRGLTTALGHKGQTTILEDVTLEVAAGEVLGVVGESGSGKSML
ALAVMGLLPSGIQCTAGSIRLLGDELTAGSASAWRARRGPDMAMVFQEPM
SSLNPVMRIGAQIEEVLRRRLRMKGDAATRRALDLLERVEIPSAKSRLAV
YPHEMSGGMRQRVMIAMALACDPKLLIADEPTTALDVSIQAQILDLLRAI
QRETGMALMLITHDLGVIAEMADRVMVLYAGRVAETAPVQVLFDTPAHPY
SRALLDSVPTVATRVERLTTIEGSVPAVGAMPPGCRFAPRCAHRTNACDM
EPPASRLLMSGHSVACLHLGAVTPAAPIAMETNS
>Rfer_2800 4Fe-4S ferredoxin, iron-sulfur binding
MQATNLGNPAYFHKVVDCQWACPAHTPVPEYIRLIGQGRYTDAYMINWVS
NVFPGILGRTCDRPCEPACRRGRVEENNGEKPEPVAICRLKRVAADNKDS
VLARMPQVAPSNGKRIACVGAGPASLTVARDLVPLGYEVTVFEGEAKAGG
FMRTQIPHFRLPESVIDEETGYILDLGVKFKNNQRVDSMKELMTQGYDAV
FVGCGAPRGRVLDLPGHKQAEAGIHIGIDWLASVSFGHVTSVGPRVIVLG
GGNTAMDCCRSARRLGGSDVKVIVRSGFEEMKASPWEKEDAQHEGIPIIN
FHVPKSFNHKDGKLTGMTFEVVSAVYDDKGRRTLVPTGEPDVVFECDTVL
VAVGQENAFPWIERDTGIEFDKWGLPVLGKDTFQSSVPRVFFGGDAAYGP
KNIITAVAHGHEAAVSIDRFLNGEAVEVRPAPRTNLMSQKMGIHEWSYHN
DVSVDKRFVVPWAKAEVALASIRVEVELGFDAATAFKEASRCLNCDVQTV
FNRDTCIECDACVDICPMDCITFTSNGEEADLRTRLKAPAHHTAQDLYVS
SELKTGRVMVKDEDVCLHCGLCAERCPTGAWDMQKFLLNTTQAGPGCRDS
RKVQTEAA
>Rfer_2633 Spermidine synthase-like
MADTPVDASAFDSPFVFSADGHKSLYFTLDQLQSRMCSAHPDQLEVDYTR
TMMGFLLFDSRPARIAMIGLGGGSLLKFCYRHLPNSLLTMVEINPKVIAL
RHEFEVPEDAQRIELVCADGADFVRDAAANNPIGYDVLLVDGFDSEGLAP
SLCSQRFYNDCYQALSQQGVMVANLHHDDPQHALFTARIRLAFDGNLLEV
ASQEKSNSILFARKGSPISMDDIRQSNPLKNFDPEVRSQLQREFARISWA
ATQVA
>Rfer_2111 aminotransferase, class I and II
MGITKTPSLQTKLPNVGTTIFTVMSALAAEKNAVNLGQGFPDFNCDPKLV
DVVTDAMKQGLNQYPPMTGVPVLRDAIAAKIKALHGRDYSAASEITVTAG
ATQAIITIILAVVHAGDEVIVLEPCYDSYVPNIDLAGGVPVRVPLTPGTF
RPDFDKIAAAITPKTRAIIINSPHNPSGTVWTADEMLRLQEILAPTNVLL
ISDEVYEHMVFDGQQHQSASRFPGLAARAFIVSSFGKTYHVTGWKVGYVA
APATLTAEFRKVHQFNVFTVNTPVQYGLATYMADPKPYLELPAFYQHKRD
LFRKGLERTKFKLLPCEGTYFQSVDISDVSDLGETDFCKWLTSEIGVAAI
PLSAFYGNGFDQRVVRFCFAKKDETLNAALQRLQTL
>Rfer_0700 Orn/DAP/Arg decarboxylase 2
MTLTERQLPVHAPMNQFSVREGELTVGGERLSLLAARVGQTPFYAYDRLL
LRARVAALRGVLPRTVKLHYAMKANPMPAVVGLMVGLVDGIDVASAGELK
VALDAGANPLEISFAGPGKRDAELRQAVASRVLINLESFREVAALEAICG
ELGLSARVAVRVNPDFELKGSGMKMGGGPKQFGVDVEQIPELLGCIGRAG
LSFEGFHLFAGSQNLRSESICEAQQKSYELALRLAQHAPAPVRFLNLGGG
FGIPYFPGEQRLDLAPIGDNLAQLVQRAQTELPDAALVIELGRYLVGEAG
VYVARIVDRKVSRGQVYLVADGGLHHHLSASGNFGQVIRKNYPVTIGNKA
DSRETETVSVVGPLCTPLDLLAERMALPVAQVDDLVVVFQSGAYGASASP
QGFLGHPACLEVLV
>Rfer_2389 inner-membrane translocator
MSSKVYQFKPFNVGRVVIWTLFALVLLTAPLLFTSSLSQTMLSQMGIAII
VCLSYNILLGQGGMLSFGHAVYSGMGSFLAIHTLNQVSGGWPLPVSLVPI
AGGLASMAVAILLGWVTTKKAATPFAMITLGIGELVWAMSLMFPEFFGGE
GGVSGNRVAGAKTFGISYGPQIELYYLIAVYTFICTGLMFAFTRTPLGRM
LNAVRDNPERVEFVGYDTQKVRYIAFIIAAFFAGISGGLAALNFEIVTSE
VVSGYRSGAYLLFTFLGGATFFFGPIIGAILMVLAFVLLSEFTKAWLLYL
GLVFLFMVMYAPGGVASLLMMNLRVAKFGHLRKLWVSYLALGLTALVVLL
GAAAMIEMVYHLQLNSALGPELTFLGGTLNSKSLNSWFGSGFVMLTGLGL
FEICRRQFAREWGQIQESIEKEIKRMESL
>Rfer_0347 FAD dependent oxidoreductase
MLLASDTQLNQKSYYEASVQRAPVGPPLRGELNADVLVVGAGFAGLSAAI
ELAQRGYQVVVLEADRVCSGASGRNGGQAIVGFSGGQAPFDQQLGQAHAR
LAWDMTVEGLAMIDERVKAFQIDCDHVKGYLYLADSRRKARALEAELTTL
ERDYGFVTELVKGADVQRHIQSPRYCAAAFERQSGHLHPLKYGLGLARAA
KALGVQIFEHSAVLAIKRGSRLMARTGAGVVTAKFGVLAGNCTLAEYGPA
VAPDITPRIMPVGTYIIGTAPLAPGLCRRLIPSNASACDNNFILDYFRFS
ADHRMLFGGRVSYTTRTPAHLQDTLARRMGEVFPALRQVPIDFVWGGFVD
ISMNRAPDFGRLGDNLYYLQGFSGHGVALTGLAGRVVAQAVAGQAERFDV
FAKLQHRKFPGGPLLRRPSLVLGMLYHRLRDAL
>Rfer_1248 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
MNNTDKVAVCSRSFSKNPVLRAELLARYSQVTFNDSGQQYEGDALVAFLR
GHDKAITALEKIDHAVLSQLPDLKVIGKYGVGLDMIDMAAMRHFGKRFGW
TGGVNRRSVSELVISFAVAMLRHVPAAQKEVLAGTWRQHVGGLLSGRTVG
IVGCGFVGKDLIELLQPWGCTVLAHDILDFPEFYKRHSVVPVGLDELLQK
SDVVSLHLPLNDSTSNMLSAEKLQLLKSTSILINAARGGIVDESALKAML
IEKRLAAAAFDVFSVEPPEDRELVALPNFLVTPHIGGSAEEAIIAMGRAA
IDGLDTNDIP
>Rfer_3225 binding-protein-dependent transport systems inner membrane component
MIASLPRPLWLRASTVVYGLLFFAFLFLPLVVVAVFAFNDAAYPAPPWRG
FTLDWFLGGADTARRGLFADSAMLGSLWTSVVVACWVTVLSVLVGTANAF
LIERTQFRGKQALSLLMLAPLVIPGVILGISILAFASRIANLADDLWALE
LNFLRPGLPLVVLGQFSYIVSIATLTITARLKRFDVTLEEAAYNLGASRA
AVFTTITLPYLQPALIGAAAISFLMSFENFNTTLMLVGSDAPLTVMMYGR
MREGATPVLNAVSLFLMVASALLALTLLRGKPSAQGPAAV
>Rfer_2953 phosphoribosyl-ATP pyrophosphohydrolase
MTANTSTSDTLAHLARVIESRLPQNGGDPDTSYVARLLHKGPNAFLKKIG
EEATEVVMAAKDADNGGDKTKVVYEVADLWFHCMIALAHYGLSPADVVVE
LDRRAGTSGIEEKAMRKVTAREDEQPGAAQ
>Rfer_0237 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
MLLNLNFRVIGETLPEFWVGFVSTLSISLTAFAGAIAIGIIACAMSIQPS
RLVRAPAVAYVDVIRATPLLAQLYFLYFGLPSFGVIMPETVIGIIALSIN
SGAYVSEIIRSGIMSIPHGQVEASASSGMNYWQQMRLIILPQALRPMVSP
LIGQAIVLVKDSSLLSLISVLELTRAGQTLANDRFMPVEGLATTAVGYLI
IYFGLKLMAAAWMRINHPSERH
>Rfer_1792 aspartate-semialdehyde dehydrogenase
MMKIGNLVGMVGWRGMVGSVLMDRMQTEGDFDLIEPVFFSTSNAGGQAPA
LAKNETTLQDAFDIEALKKCDIIISAQGGDYTTEVFPKLRAAGWSGHWID
AASTLRMKDDAIIILDPVNLPVIQNALTKGGNNWIGGNCTVSCMLMGVGA
LYKAGLVEWMTSMTYQAASGGGAQHMRELLTQFGTLNAEVKDMLDDPKSA
ILEIDRRVLHKQQSLTSAETANFGVPLGGSLIPWIDKDLGNGMSREEWKG
GAETNKILGQGAAFGTAETPVDGFCVRVGAMRCHSQALTFKLKKDVPAAD
IEAMIAADNDWVKVVPNTREASVQHLTPVAVTGTLGIPVGRIRKLAMGPQ
YVGAFTIGDQLLWGAAEPLRRMLRILLAA
>Rfer_4066 ABC transporter related
MTQPGTDHVLEVNNIEVIYNKVVQALRGLSLVVPRGQIVALLGSNGAGKS
TTLKAISGLLALEDGELKSGSISFNGQSTARLAPQQLVRQGLSHVMEGRR
IFEDLTVEENLVTASYALTGRGGVKPDFDLVYSYFPRLHERCKGLAGYLS
GGEQQMLAIGRALLAQPQLILLDEPSLGLSPKLVEDIFTIIARINAERGV
SMLLVEQNATLALAVAHSGYIMENGKIVIDGSAERLAGDPDVREFYLGVG
GSGEARSFRDIKHYKRRKRWLS
>Rfer_2979 glutamine synthetase, type I
MAKTVADVMKMVKDSEVKFVDFRFTDTRGKEQHVTVPVSHFDEDKFSSGH
AFDGSSIAGWKGIEASDMQLMPDPNTANIDPFFEETTLFMSCDVVEPNDG
KAYDRDPRSVGKRAEAYLKASGMGDTAFFGPEPEFFIFDDVRWNTDMSGT
FFKIDEYEAPWNSGKKIEGGNRGHRNTVKGGYFPVPPVDSTQDMRAEMSL
ILESLGIPVEVFHHEVAGAGQNELGTKFSTLVQRADWTQVLKYVVQNVAN
AYGKTATFMPKPIVGDNGSGMHVHQSIWKDGKNLFAGDGYAGLSDFALYY
VGGIIKHARALNAITNPGTNSYKRLVPGFEAPVKLAYSAKNRSASIRIPY
VANPKGRRIEARFPDPLMNPYLGFAALMMAGLDGVENKIHPGEAATKDLY
HLPPEENAKIPTVCHSLDQALDCLDADRSFLTKGGVFTDSLLDAYIELKM
GEVTRLRMATHPIEFDMYYSL
>Rfer_1523 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
MNFAVIFEPQNLALYGTGLLTTLALLFSSLAVGAVLALLCALALTGPWAP
LRWVVGAYTYVMRGTPLLIQVYLIYYGLGQLEWIQARWDTVWPWTHFKEP
FFCALLAFSLNTAGYTAEMLAGAIRETAAGEIEAAQAYGMSRFKVMLHIV
LPSAMRRTLPAYSNEVVMMLQATSLASAVPAMLDVTAAASRIYSDYYLPF
EAYLAAAAIYLVASFCLIGFFRFSEGRLLAYLAPRKL
>Rfer_0355 binding-protein-dependent transport systems inner membrane component
MKKLLNRYFGKAWLAVTFLFLYLPLFFMLVFSFNNTRQDAVFTGFSLRWY
EALTRDTKIVDGFWLSVQVATAAGVASAVLATFAAFVLVRYRRFAGRTLF
SGMVNAPLVMPEVVIGLSLLLLMVGVQNALGWPQRGMLTIVLGHMLLGMA
YGTVVVQSRLLEMDRAIEEAAMDLGAKPFQVFFLVTLPNILQAVLAAYLL
AFTLSFDDVVIAEFLSGPGVNTLPQVIFGYARRGINPTIYAAATLLIASV
TLVVITYSVWVARQTRKREREIAAATRAELLALQAQ
>Rfer_1015 ABC transporter related
MNKPLLSARGLRKRFGAVVAADDICIDIPAGQRLSVIGSNGAGKTTFVNM
VTGYLKPDAGQILLNEHDITHLSHQSIAGMGICRSFQIPMLCLELTALEN
LLVAVAASENRQSLWQPADSPAARERAQALLEKFQLQAYASRPVMQLAGG
VRKLLDIAMALARRPKLLLLDEPTSGVSADEKFPTMERVMGAMQDEAVTI
LFVEHDMEIVANFSERVIAFYSGRVIADSSPAEVMANQDVRNYVTGGAQ
>Rfer_3444 Diaminopimelate epimerase
MRIPFTKMQGAGNDFVVLDETQGRFGLSTAHYRLLADRHFGVGADQILTV
RPSPAPGIDFEYLIHNADGAEVEQCGNGARCFARFVRDQGLTAKDAIRVQ
TRGGVIEPQLNPDGRVTVNMGAPVFELAEIPFDATGLQPQTSGLWKKWPL
ALVDSGHATTVYVAVVSMGNPHAVQVVDDVDTAPVRLQGPLIEHHASFPK
RVNAGFMQIVDRSHIRLRVYERGTGETLACGSGACAAVVAGIRLGLLDDT
VHVQTHGGTLTISWAGAAAPVLMTGPATPVFHGEINLPDNL
>Rfer_2925 Shikimate kinase
MIVSLIGLPGSGKSTVGRQLARRLQLPFFDSDHLIEQQLGCSIREYFERE
GEDRFRDVEESVIDELTQKQTGVVSTGGGVILRPANRQHLRERCRVVYLN
SSPDELFRRLRHDVNRPLLQVADPLARLRDLHTLRDPLYRETAHFIIETG
RPSVATLVNMIVMQLELAGVPLKPLNSPP
>Rfer_0453 dihydrodipicolinate synthetase
MTQTNQARFKGVFPVVPTTFFENGELDLASQKRCVDFMIDAGSNGLCLLA
NFSEQFLLSDDERDVLTRTMLEHVAGRVPVIVTTTHFSTQVCAQRSRRAE
DLGAAMVMVMPPYHGATFRVSEERIYEFYAGLSDAIDIPIMIQDAPASGT
VLSAAFLARMATEIKQVAYFKIETAGAASKLRELIRLGGAAIEGPWDGEE
AITLLPDLDAGATGAMTGGAYPDGIRLIVDAYCAGRREEAIAHYQQWLPL
INYENRQGGILSAKALMKEGGVIACEAPRHPWPSMHPAVRAGLIETAQRL
NPMVLRWGK
>Rfer_2993 Asparaginase
MAAKFIEKVLVLATGGTIAGSAASAADNIGYTAAQVGVSQLLAAVPGLDQ
VLAGRTLEAEQVAQIDSKDMSFAVWQQLAQRVSHHLAQADVTGIVITHGT
DTLEETAYFLHAVLPARQLAAKPVVLTCAMRPASSVAPDGPQNIRDAVVV
ATTTGACGVLAVCAGAVHAAADVQKVHTYRLDAFSSGDAGAVAYVEEGAV
RLVKNWPLAPVDRAHVAIEEIASVSHWPRVEIVMNYAGASGALVDALLAP
VSAAGAQGQTDAQLAQVPLRGLVVAGTGNGTIHQDLEAALRRAQALGVRV
VRSTRCATGRVLATESSEFAHSKGLSPVKARIALMLELMQA
>Rfer_1795 3-isopropylmalate dehydratase, large subunit
MDRTKIETHGRTLYDKLWDEHVVHTEEDGTAILYIDRHLVHEVTSPQAFE
GLRQAGRKVWRVSSIVATADHNTPTTGWDLGYDGITDPTSKEQVVTLDSN
MQEFGAAAYFPFMSKRQGIVHVIGPENGATLPGMTVVCGDSHTSTHGAFG
ALAHGIGTSEVEHVMATQTLLAKKAKNMLIRVDGTLQRGCSGKDIVLAII
GKIGTAGGTGYTIEFGGSAIRALSMEGRMTVCNMAIEAGARAGLVAVDEK
TIEYVKGRPLAPGHNAANDTAAAVEWDQAVAYWKTLHSDADAHFDAIVEL
DAAQIIPQVTWGTSPEMVLGIDGRVPDPDKEKDANKRGAIERALVYMGLE
PGKALDDLHVDKVFIGSCTNSRIEDIREAAALVKKLGQKVAKNVKLAMVV
PGSGLVKEQAEREGLHEIFKAAGFEWREPGCSMCLAMNADRLEPGERCAS
TSNRNFEGRQGAGGRTHLVSPAMAAAAAIHGHFVDVRKFV
>Rfer_2585 ABC transporter related
MLEVSNVRAGYGAINVLWDVSLTVARGQLTTIIGPNGAGKTTLLRAIMGL
LPVSQGEVKLNGKTLSGTPTWKMADVSLAMIPEGRMTFRDMSVEENLIMG
AFPKQHRARVQENLEKSYQMFPRLSERRRQLAGSLSGGEAQMLAMARGLM
ADPQLLIIDEPSLGLAPVLVNELFEILARLKEGGRTIVLVEQNTHRAVAV
ADHVYLMQSGKVVLSQPANEVSLDHLHDLYFAR
>Rfer_1164 conserved hypothetical protein
MNETLTLALAWVAGGVLGTIFFGGLWWTVRKGVSSKQPALWLFSSLLLRI
GIALAGFYFVSGGHWERLLACLLGFVVARLVVTWMTRSSGKNQTRPAREA
SHAP
>Rfer_0392 ribose-phosphate pyrophosphokinase
MARHELAQGMLLYSLDSDDTFAQGLAASLGVKLAPHEYRRFEDGEHKLRP
LLDPRGSDTFVVHSLHGDAQNSPHDKLCQLLMFIATLREHGAARVAAVVP
YLAYARKDRQTKPFDPVSLRYVAQLFEAVGTTQLMVLEAHNVAAFQNAFR
CPTMHLEAHQAFNAMALELAGDARLAVASPDPGGVKRAQLWRESLETTLL
RPVGFAMVDKRRSAGVVSSENLVAGEVDGMRVLLLDDLIASGETMRRAAL
ALRQSGAREVLACVAHGLFTGSAAQVLTDDSIARIIITDSVPPFRLPLAC
AARRKLSIASAVPLFAQAIKASAGAWSG
>Rfer_1946 major facilitator superfamily MFS_1
MRSARLKRFTYHRSMTSTSLHLPLAVPLKQDATIIGLVGLAHASSHFAHL
LLAPLFPVFMTEFGLSYAELGLLMTTFFVVSGLGQASAGFAVDRLGARPL
LFVALGIFVLACGAASLVTGYAGLVGVAALAGLGNAIFHPVDFTILNQRV
SAPRLGHAFSAHGLTGYLGWAAAPVFLVTLSSLYNWRTAYLAAAVMYVGI
LVWLILQRDKLSTQVAVQHADVGAEHSMAFMKLPVVWWCFAFFLFSTMTL
AVVQSFSVSILKAMHGVSFEAATLTLTAYMLCGAVGIFVGGFVAARTGHS
DRVVAMSMAVAAVLLALCGTGLLGATGTMVVLAGTGFAVGIGGPSRDMMI
KNATPQGATGRVYGLVYSGLDTGFALSPFVFGVFMDRGWYGATLFGAAAV
LLLSVVAALGVGQRTARSRR
>Rfer_2192 Na+/solute symporter
MLNPAVEVGEFKPIPGGFRLHGWLLAIWFAASFGVVFFARDLQIIVAGWP
LGYWFAAQGSVFIFIAVVAVFAWVANRRDREITTADAAYTAYKHRLHWRF
SAYVVCLLLFLLALALAERLGLKKMWVGSIFLFATVALYAVIGIYGRTSD
ASEYYVAGRSIPAVYNGMAVAADWMSAASFISMAGGLYLQGFSGTPSQPG
GLVYVLGWTGGFCLVGLLVAPYLRKLDLYTVPDYFGVRFGGRWPRMIAAF
AAVLCSFTYVVAQIYGVGLITSRLTGVQFEIGILLGLGGVLVCSFLGGMR
AVTWTQVTQYVVLILAFLIPVSWLAYKQLGNPLAPFVYGQQLQKITELER
QLIDSPAELQVINEYARRARDYERKLQHVEASLESERNTIREKIRFLNEH
RVDESIVVAARRELAALPKDTVSARERWMHAMQDNLDRAQPLGGMPAHAK
PFAGDPQGSADEKKAFDVSRRNFLALTFCLMVGTAGLPHLLTRFYTTRTV
AEARTSVVWSLFFIALLYLSAPALAVLVKFEVMSQLVGQNFDSLPVWIAQ
WAKVDPTLVSVSDVNGDHILQFSELKLGADIVMLATPELGGLPYVVSGLV
AAGGLAAALSTADGLLLTIGNALAHDLFYRGGSSQSEAVRRVMLSKFALL
LVALVAAYVAAQRPADILYLVSASFSLAGAAFVPVMVLGIFWRRTTRLAA
VVGMITGLGLTIYYMAVNSVALRSVLGLSGTGLWLDIQPVSAGVFGVLAG
FVVTVLVSLLSRSESSSPG
>Rfer_1004 inner-membrane translocator
MNQPIKTNSSPRKAGIAAGLSWRWILLLLALAVGLAFVAKGYHLFQATMV
LAYAIALLGLNILTGYNGQISLGHGAFFALGAYVAAILMEHAGAPYWATV
PAAGVFCLVVGYLFGRPALKLEGLYLALATFALGVAMPQLLKYKHLEAWT
GGVQGIVLMKPDAPFGLPLTQDQWLYLFALGVAGVMFVIAHNLLQSGSGR
AMRAIRDHAMAAEAMGVDNRHYKSMSFGVSAAYTGVGGALSAIAVQFVSP
DSFTLFLSISLLVGIVVGGVGTLWGAFFGAMFIMFVPNLAEKVSKAAPWA
VYGVVLIAIMFVMPGGVMGLLRKLNERRSHRAG
>Rfer_3113 Lysine exporter protein (LYSE/YGGA)
MEMLTTLITIWILHVAALATPGANVLLVSQLAASDRAQSAVFAALGVTLG
AFVWASSAVLGVHALFQAFPGLRLALQIAGGVYLLVVAGRLWRSGAAALI
ESRASVSRRAAFRLGFLTNITNPKSALFFGSVFAASFPAAPSPLLQMAAV
AMIVTNALSWHILLAYLFSRAQVRSGYSRVRGLANRMAAAVVGVLGLGLL
VATLRDARA
>Rfer_0291 ABC transporter related
MSDTVLSAQGLVMKFGGITATNNVTLDLKQGARHALIGPNGAGKTTLINL
LTGVLQPTSGKIVLEGQDITTLAPYQRVRRGMVRTFQINQLFDTLTPLET
LAMVVSQQQGLGNKWWQALGANQRVTERCEQLLEQFHLTAVMTQPTRVLA
YGKRRLLEIAIALACEPRVLLLDEPVAGVPAGEREELLQTVAALPADVSI
LLIEHDMDLVFSFAKRMTVLVNGTVLTEGDPDQIAHDPQVKAVYLGHGDE
INDAMGGMMASAGGTHHG
>Rfer_1546 aminotransferase, class IV
MDNSVMNTLPPLPCYLNGEFTELPNAKISVMDRGFIFGDGVYEVVPVYGG
QLFRFAQHMARLDRSLAELRIANPLTPAQWAEIAHKLIVTHADSTGASVQ
NIDQLIYIQITRGVAMRDHVMPTDITPTVFVMINAMKLPSEAMRSQGVAC
VTADDFRWEKAHIKSTSLLGSVLARQISFDAGATETIMFRDGFLSEAAAS
NVWVVKGGKVLGTPKDNLVLEGIRYRLIEDICRARGIPFELRRLSREEVR
DADELLLSSATKEVLPVTTLDGKPVGQGKPGPVYAQLYAGYSEAKAQSRQ
SPTA
>Rfer_0932 binding-protein-dependent transport systems inner membrane component
MKTPLILKKLFRRRIVLGAAICLLVVVLVALLANVITGYDPNETAVSQRL
SVPTATHLMGTDELGRDLFARIAFGGRYSLTIAALTATGAIAFGTLFGLV
AGFFRRLDAPIMRVVDAMMSFPDILLAIALVAILGPSMFNVVLALVLVYT
PRVARVVRASTLVVRELLFVEAARAVGVSTARILWRHILPNLMSPILVQA
SFIFAYAILAEAALSFLGVGVPPEIPTWGTMVAGSQQYAHDALWVVLFPG
FAIILTALSLQLLGDGVRDLLDPRLKKSM
>Rfer_2105 Amino-acid N-acetyltransferase (ArgA)
MTSVFNFTFVPWFRSVAPYIHKFRHQTFVVGIAGEAIAAGKLQHLAQDLA
MIQSMGVKIVLVHGFRPQVSEQLKAKGHAARYSHGIRITDEVSLDCAQEA
AGQLRYEIEAAFSQGLPNTPMAGATVRVISGNFLTARPVGIVDGVDFQHS
GVVRKIDTAGIMRSLDMGALVLMSPFGFSPTGEAFNLTMEEVATSVATAL
QADKLIFVTEIPGIRIHPGQPESEDNPIDTELPLVTAEKMLTELPAANQP
TDTAFYLQHCVKACKGGVERSHIIPFAVDGAILLEVYVHDGIGTMVVDEK
LESLREATVDDVGGILQLIEPFEKDGTLVKRSRTEIERDVGNYTVIEHDG
VIFACAALYPYPEARTGEMAALTVSPQVQGEGDGERVLKRIEQRARVTGL
ESIFVLTTRTTHWFLKRGFVLVDPDWLPEARKRKYNWDRKSQVLVKKLGN
A
>Rfer_1956 protein of unknown function DUF6, transmembrane
MTAVTPAPSSQPTTSRLLRGYFYLTLSMSLVGSYVALSKPLAAALPVLLL
AWLRFGIGALAMPHWLAKPATEVPMTWHTKRLLFLESFLGNFLFTLCMLY
GVSLTSAVSAGIIMATIPAMVALLSWVFLRERIGLRVWTAIGCAAFGIVL
FALSKSGQVTQTGHGLEPPSIYKDAWLGNLLVFAAVVCEASYAVIGKQLT
GVLTPKRITALINLWGFILMTPFGLYAAMKFDFLTVRPATWLLLVFYALA
ASVWTVWLWMTGLKTVPAASAGVFTVMLPISAALVGVLVLGETLSGMQVL
AFAIALAGVVLATLPAQR
>Rfer_0967 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
MDFTLGQFLHELWIARAPIVQGLGVTIVAAALAIVTGSILGVGVGLALTY
GAKPLRWMTRAYTDFIRGTPVLVLVLASYYILGAAGVQLSPFQAGVLALA
VFCSSHVGEIVRGALQAIPVGQIEAAKAIGLTFSQTFLYILLPQAIRQVL
PTWVNTAAEMVKASTLLSIIGVGDLLLASQEVISRTFMSLPFYFFAGFLY
FTANFAIEHFGRYVERKTKIPS
>Rfer_0288 Extracellular ligand-binding receptor
MNKRQFIHAIALAVSLLAASNSIAQGNTFKIGLILPMTGQQASTGRQIEA
AAKLYMAQNGDTVAGKKVGLIVKDDTSIPDVTKRLAQDLVVNDKVNVLAG
FGITPSALATAPIATQSKTPLVVMAAATSSITQASPYVVRTSFTLAQAAV
AMGDWAPKNGIKKVVTLVSDYGPGIDAEKYFKERFLFNGGQVPESLRVPL
RNPDFAPFLQKVRDLKPDALFVFVPSGAGAAVMKQFLERGMDKAGIKLIG
TGDVTDDDQLNGMGDGALGVVTSHHYSTAHPSAVNKKFVEAFGKANPGLR
PNFMAVGGYDGMRVIYEALKATKGQGGGDALLAAMKGQIFESPRGPMFID
AQTRDVVHNIYLRKVEKKDGQLYNVEFDVIKDVKDPGKAK
>Rfer_0233 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
MAAFALKDLIEFAPILAQGAVVTVEVFACGLIVATLLGLVWALMRVSGVA
ALAVFSKGLINTIRGIPILVQLFFIYFVLPDVGIQLSAFQAGFIGLGFAY
SCYMAEVFRGGIEAVDPGQVEAAKSLGMGRAMTMWRVVLPQAFKVALPPY
GNTCIMLIKDTSQASIITVTELTFQSKVIAASTFKNAEVFTLVALFYLLL
CIPLIMIVGRLEKRFGR
>Rfer_0466 5-methyltetrahydrofolate--homocysteinemethyltran sferase
MSEIIAPSMKLSGLEPLTIGLALSADAPSPSAGDRAEDLSPIASFVNIGE
RTNVTGSKAFARMILNGEFDQALSVARQQVENGAQIIDINMDEAMLDSQA
AMVKFLNLIASEPDISRVPVMIDSSKWSVIEAGLRCVQGKPVVNSISMKE
GVDAFKHQAKLLRRYGAAAVVMAFDEQGQADTYERKIGICERAYRILVDE
VGFPPEDIIFDPNIFAIATGIEEHNNYAVDFINATRWIKQHLPGAKVSGG
VSNVSFSFRGNDPVREAIHTVFLYHAIKAGMDMGIVNAGMVGVYDDLEPE
LRERVEDVVLNRRPDAGERLVEIAETAKSGAKDESKKLEWRGTPEHPVSV
EQRLSHAMVHGITDFIVPDTEEAYQAILAKGGRPLHVIEGPLMAGMSIVG
DLFGQGKMFLPQVVKSARVMKQAVAHLIPYIEEEKRLDEAAGRDVATKGK
IIIATVKGDVHDIGKNIVTVVLQCNNFDVVNMGVMVPCHEILARAKVEGA
DIIGLSGLITPSLEEMAYVAGEMQKDDYFRIKKIPLLIGGATTSRVHTAV
KVAPHYAGPVVYVPDASRSVGVVQNLLGDAASGFVAELNTDYERVRQQHA
NKKQIPLWPLAKARANKTPVDWSAYQPTTPKFIGRRVFKNFDLGELAGFI
DWGPFFQTWDLAGPFPAILDDEVVGVEAKKIYADGQAMLKKIIEGRWLTA
NGVLGLYPANTVNDDDIELYTDETRSTVAMTWYGLRQQAAKEEIDGVMRP
SRCLADFVAPKIATENIASDAMKTGATGQKGLNKPGNAETVIPAQASIRD
YIGVFAVTAGIGIEKKEAQFLAAHDDYSAILLKSLADRLAEAFAECLHKK
VRTDLWGYAPDEALPAKDLIAEKYQGIRPAPGYPACPDHSVKKDMFELLQ
CGDIGMGVTESLAMTPAASVSGFYIGHPDSTYFSVGKIGDDQLKDLAMRR
GMDEKALQRLLAPNL
>Rfer_1945 Twin-arginine translocation pathway signal
MKTHKGSSAVLAALAAAALFGASTPLAKQFVGDMSALLLAGLLYLGSGVG
LLALRVLRDHGWHSPGLARREWPWLLTAIGCGGVVGPTLLMLGLASTSAA
AASLLLNLEGVLTALLAWFVFKENANRRVVLGMALIVAGGLLLSWPGPAV
GTNHGGAGAALIVGACLCWALDNNLTRQVSNSDALFIAGLKGIVAALVNI
GLALALGQSLPPWRVVGPVLLIGFVGYGISLALFVLALRGLGAARTGAYF
GAAPFVGAGIAIGVFGESTSPLFWGAGLLMAAGLWLHLTERHEHPHWHGT
LQHSHPHFPDIHHRHDHS
>Rfer_3386 Gamma-glutamyltransferase
MKNLHFASKLQTSLLVTGILLAAHSGLQAASVAPVAAEHGMVVSAQQLAT
KVGVDVLRRGGNAVDAAVAVGYALAVVYPAAGNLGGGGFMTVQLADGRKT
FLDFREKAPLAASANMYLDKDGNVIKGLSTYGHLAVGVPGSVSGMEYART
KYGTMKRAELLKPAITLAEKGFALNQGDIDIFHTATADFSKDPASAAIFL
NKGQAFQVGQKLVQKDLAKTLKAISQRGTDGFYKGPVAAAIVKSSQSGGG
ILTQADLDQYSVREMAPIECDYRGYHVISAPPPSSGGVVICEMLNILEGY
PLKDLGFRSAQAVHYQIEAMRHAYVDRNSYLGDPDFVKNPIARLTDKAYA
AQIRAVIDPNKAGVSKDLKPGVEPHEGSNTTHYSIADQWGNAVAVTYTLN
DWFGAKMTAAGTGVLLNDEMDDFTSKLGVPNLYGLVQGEANAIAPGKRPL
SSMSPTIVSKDKQPVMVLGTPGGSRIITVVLHTILNVVDYGMNVQEAVDA
PRFHQQWLPDLTNVENFAISPDTRKLLEAAGHKLGAPQPANHMAALLIGA
PSLGGKPVGNNRFYGANDPRRNSGLAMGY
>Rfer_0236 extracellular solute-binding protein, family 3
MKMSNFLPAILLACAGFAGVAATAHASTLDDIQKRGELRIAVQTQGPPFS
MIDKNGERTGSSVELAKLMAKEMGVKAVFLDLDWDGLLPALISGKADLLA
ADMTPTLARATKVAFTKPFIYIGPVVAAKAGSKFTSTAACKAPGTKIAVL
FGSTGEKLAKTVFEKGEIKSYKGGGTLLLDAVKNGQADCLLNDSSAVAGQ
AAGYPAGTFKVMPELLAKEPLAYATRYDSLDLLTWINLFIDQTTLDGRLQ
QNLDYWVNSAKWKEAH
>Rfer_0887 binding-protein-dependent transport systems inner membrane component
MRKNGPLALLFNALVIAFMLAPLLVVCVVAFTPENTLTLPTSRFSLRWFE
AVFAHPDFMQSFWNSLWLALASATLATLLAVPAGMAITRYTFPGRGFLNG
LFLSPLIIPHLVLGVALLRLFALVGGTGSFGWLVLAHALIVTPYTLRLVV
AALVGFDRSAEQAALSLGASQTQMFTRITLPMILPGVTGGWLLAFINSFD
EVTMSIFVTSPSTVTLPVRMYMYATESIDPLMAAVSALMVAVTAFAMIIL
DRVYGLDRVLVGR
>Rfer_0818 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein
MQLVCLDLEGVLVPEIWIEFASRTGIPALSRTTRDEPDYDKLMKYRLDLL
KTHKLGLPDIQKVISDMGPMAGARDFLDALRRDYQVIILSDTFYEFAMPL
MAQLNMPVLFCHKLEADANGFLVNYHLRMPNQKKEAVQRFRELQFKVIAA
GDSYNDTAMLAAANAGILFHPPQNVIDEFPQFPVTLNYTELRSEIDKAAK
R
>Rfer_0881 aminotransferase, class I and II
MTSFQSAQRVRAISVSEILRITDHANALKRAGRPVIVLGAGEPDFNTPDN
ICQAAIRALERGETRYTVLDGSSVMKAAVQHKFQRDNGLTFALNEISVSA
GAKQVIFNALMASINPGDEVILPTPFWTSYADMVQICGGVPVLLPCSEAQ
GFRLEPAQLEAAITPRTRWVFLNSPSNPSGAAYSAAQLKLITEVLLRHPA
VWVLADDIYEHILYDGLAFATPAAVEPGLRDRTLTVNGVSKAYAMTGWRV
GYGAGPKDLIAAMAVVQSQSTSCPSSISQAAAVEALTGPQSIVAERCSSF
QARRDFVVAALNRTPGLNCRTPEGAFYTFASCSGVLGRHTPGGVQLHTDT
DFCHYLLQDFDVAVVPGTVFGLAPYFRISYATAMTQLEEACARIHAACAA
LR
>Rfer_2025 putative carboxypeptidase
MSNNDAYTDKRCTRDGFDAKLTVHDDRPSTLIPSATVTQTRLPELLALER
IIELGAAWLETRVVCSVNLPGGGSYPVHVIALGNPAPDVPAVGYFGGVHG
LERIGTGVVISYLQSLVMRLQWDSTLHRQLESVRLVFMPIVNPGGMALGT
RANPNGVDLMRNAPVEAQEPVPFLVGGQRLSAGLPWYRGLKGQAMEIENQ
AVTDVVKTELLPRSFSLSVDCHSGFGASDRIWFPYAHTRVPITHLAEMHA
LKSIFVQSNSHHRYIIEPQSLQYLAHGDLWDHLYQQSCAQAKNIFLPLTL
EMGSWLWVKKNPRQLFSRHGIFNPLIEHRQQRVLRQHQLLLDFLSRAACG
HPLWLPGHETRAQHHAQALQDWY
>Rfer_1856 ABC transporter related
MIELQHVSKGFNGVKAIEDLSLNIARGEFTVILGSSGSGKSTLIKMINRL
LEHDSGRITFAGDEIRSFRPEDLRRRMGYAIQSVGLFPHWSVEKNIATVP
TLLKWPPSRIHDRVTELMTLLQLDATLYRKRYPHQLSGGQQQRVGVARAL
AGNPEVLLMDEPFGALDPVTRAALQLEIARIHKAFDKTIVLVTHDIDEAL
SLATRIVLLDQGRIVQSGTPLQMLSSPANDFVSDFFGRSDVGIKLLGLQS
VATRLRAGEHAAGAPVLASSSLREALSMFLSRRVDRLPVVDGDGQALGVI
DFSDLLDLRP
>Rfer_0889 ABC transporter related
MDIEKRPNMSFLQLNNVTKFYGSTCAVSAMNLTVEKGEFVSLLGPSGCGK
TTTLQMVAGFESVSSGSIELDGRDITHAKANTRGLGIVFQTYALFPHMTV
ADNVSFGLEMRKMPKAERSERVKQALALVHLEALAQRYPRELSGGQRQRV
ALARALVIEPPVLLLDEPLSNLDAKLREEMQFELRKIQRKVGTTTVMVTH
DQSEAMSISDRVVVMEGGCATQIDNPHSVYEHPRTRSISTFVGKANLLTG
HVVTGGAKTRVNLGSIEVDVDDAGFHHGTLVLLSVRPEKLQLREAGQGRL
DGTVRERFFLGSQWLYTVNTALGELSVLSPNDGRPALDEGHLAGIDWPTH
CTRLLPADQAALQSVEPA
>Rfer_1026 dihydrodipicolinate synthetase
MSPLPQARFQGVFPVVPTTFTETGELDLASQRRCVDFMIDAGSNGLCLLA
NFSEQFLLSDDERDVLTRTMLEHVAGRVPVIVTTTHFSTQVCAQRSRRAE
DLGAAMVMVMPPYHGATFRVSEERIYEFYAGLSDAIDIPIMIQDAPASGT
VLSAAFLARMATEIKQVAYFKIETAGAASKLRELIRLGGAAIEGPWDGEE
AITLLPDLDAGATGAMTGGAYPDGIRLIVDAYCAGRREEAIAHYQQWLPL
INYENRQGGILSAKALMKEGGVIACEAPRHPWPSMHPAVRAGLIETAQRL
NPMVLRWGK
>Rfer_0214 Extracellular ligand-binding receptor
MSSSHKTLISRAVATLALSALSALPTLAQGLPKLKVGLMLPYTGTYAALG
NAIENGFRLHIAEQGGKLGGREIEFVKVDDESDPSKATDNVNKLIKRDNV
DVLIGSVHSGVAMAMAKVAKDTGTVLIVPNAGADAVTGPMCASNIFRSSF
SNWQPGYAMGEVVAKKGHKKVVTITWKYAAGDESIRGFKESFEKGGGKVV
KELNLPFPNVEFQALLTEIAAAKPDAVYTFFAGGGAVKFVKDYAAAGLKK
TIPLYGAGFLTDGTLDAQGADAADLLTTLHYADSLNTPRDNAFRLSYAKA
YKLQPDVYAVQGYDAAQMLAVGLAAVKGDIGKKAEFTTAIEKAKIDSPRG
PFTLSRSHNPVQDIYLRQVGGKENKLASIASKALADPGRGCRL
>Rfer_2006 carbamoyl-phosphate synthase, large subunit
MPKRTDIKSILIIGAGPIIIGQACEFDYSGVQACKALREEGFKVILINSN
PATIMTDPATADVTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCAL
DLWHHGVLEKYNVELIGAKPEAIDKAEDRLKFKDAMTKIGLGSARSGIAH
SMEEAWGVQKTVGFPTVIRPSFTLGGTGGGIAYNSEEFEVICKRGLEASP
TNELLIEESLLGWKEYEMEVVRDQADNCIIICSIENLDPMGVHTGDSITV
APAQTLSDKEYQILRNASLAVLREIGVDTGGSNVQFSINPEDGRMVVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELRNDITGGATPASFEP
SIDYVVTKIPRFAFEKFPAADSRLTTQMKSVGEVMAMGRTFQESFQKALR
GLEVGVDGMNEKTQDREVLEKELGEPGPERIWYVGDAFAAGWSVDEVFEL
TKIDRWFLVQIEQIVKIELEIERLPAPEQGSALDAMDGATLRALKQKGFS
DRRLAKQFKTTDTAVREKRHALGVRPVYKRVDTCAAEFATNTAYLYSTYE
SSSPFDTGSECEADPTDRKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRE
DGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPYGVIVQ
YGGQTPLKLALALEANGVPIIGTSPDMIDAAEDRERFQKLLHQLGLRQPA
NATARTEPEALEKAAALGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREA
VKVSHDSPVLLDRFLNDAIECDVDCVRDAQGQTFIGGVMEHIEQAGVHSG
DSACSLPPYSLCAETVTEIRRQTAAMAEALNVVGLMNVQFAIQTLEGADV
IFVLEVNPRASRTVPFVSKATGVQLAKVAARCMVGQSLASQGIGTEVTPP
YFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQIGAG
TKLPRPRTPSGEPAGKVFISVKNNDKPRVIEVARDLVELGFTLLATKGTA
LAINAAGVSCATVNKVTEGRPNIVDMIKNQEIALVINTVEERRNAIADSR
HIRTSALFGRVTTFTTIAGAEAAVQGMRYMDDLSVISIQEMHAQLAGA
>Rfer_2126 Lysine decarboxylase
MKFRFPIIIIDEDFRSENASGLGIRALAQAIESEGLEVLGVTSYGDLSQF
AQQQSRASAFIMSIDDEEFTPGPDLDPAVVNLRHFIEEVRRKNLDVPIYI
YGETKTSRHLPNDILRELHGFIHMFEDTPEFVARHIIREAKAYLESVQPP
FFKALLDYAENGSYSWHCPGHSGGVAFLKSPVGQMYHQFYGENMLRADVC
NAVEELGQLLDHDGAIGKSERNAARIFNADHCFFVTNGTSTSNKMVWHHT
VAPNDVVVVDRNCHVSILHAIIMTGAIPVFLKPTRNHFGIIGPIPKSEFE
PASIKAKIKANPLIKEHLPDVDLSRIKPRVLTLTQSTYDGVLYNTETVKN
MLDGYVENIHFDEAWLPHAAFHPFYGTYHAMGKKRSRPKHAMVYATQSIH
KLLAGISQASQVLVQDSQTVKLDKHLFNDAYLMHTSTSPQYSIIASCDVA
AAMMEPPGGTALVEESIAEALDFRRAMRKIDEEYGTDWWFKVWGPEKLVE
EGIGRADSWIIKGESAKAKAGVNWHGFGKMATGFNMLDPIKSTVVTPGMD
LNGKFAKTGIPASIVTKFLAEHGVVVEKTGLYSFFIMFTIGITKGRWNSM
LTALQQFKDDYAKNQPMWRILPEFCQKYPKYETMGLADLCQHVHQLYAKY
DIARLTTDMYLSDLAPAMKPSDAYAHIALRKTERVAIDDLEGRITVGLVT
PYPPGIPLLIPGEVFNKKIVDYLKFAREFNTQCPGFETDIHGLVEEQEAD
GQRHYYADCVKS
>Rfer_0669 Asparagine synthase, glutamine-hydrolyzing
MCGITGIFDTRGGSAISQAVLQRMNDSQLHRGPDEGSLHIEPGVGLGHRR
LSIIDIATGQQPLFNEDGSVVVVFNGEIYNYQQLIPELQALGHVFHTKSD
TEVIVHAWESWGADCVKRFRGMFAFALWDRNQQTFFMARDRLGVKPMHYA
LLDDGTLLFGSELKSILAHGGLCRDMDPLAVEEYFALGYVAEPRTIFKQS
KKLPPGHTLAIKRGQPLGEPVAYWDVQFSLDNPISEGDAQAELVQRLQES
VRLRMISEVPLGAFLSGGVDSSAVVAVMAGLSQEPVNTCSIGFDDPAFNE
SAFAQQVADRYHTNHRLEVVKSDDFDLIDTLARLYDEPYADSSAIPTYRV
CQLARKHVTVALSGDGGDESFGGYRRYRLHLMEERMRAALPLGVRRPLFG
ALGRLYPKADWAPRMFRAKTTFEGLSRSSVEAYFHSVSILRGPMREALFS
QSFKTELAGYNALEVFRRHAAQAGTDDPLALIQYLDLKTYLVGDINTKVD
RASMAHSLEVREPLMDHELVEWLATLPSSQKIRGQEGKYIFKKSMESYLP
QDVLYRPKMGFAVPLARWFRGPLKQRVRDAVLGDRLLATGWFNPVYLQHL
VEAHQSGARDYSAPLWTLLMFDAFLRQVVDGRVTEPAAVAV
>Rfer_3501 ABC transporter related
MNAAMNPTPVQPVPQPLLSARQLSVRFGGVLAVNNVSFDVQQGEVFTLIG
PNGAGKTTVFNLISRIYTPTSGEIDYLGPQGLIRLTEQAPQDVAGLGIAR
TFQNIELFEHATVLHNLLIGRHTQRKTGLWQDLLFTRTAREAELKAREKA
EEVIEFLDLQHHRDAMVAGLPYGVRKVVEVARALCTEPKLLLLDEPSSGL
NVEETEDMAFWIQDIKNDLGITVLMVEHDMTLVSKVSDRVLAMNQGEVLA
MGTPREVQSDPGVIEAYLGSVDDVSSLRRQTA
>Rfer_3462 Lysine exporter protein (LYSE/YGGA)
MELSTWLTFFAASWAISISPGPGAIASMSAGLNHGFKRGYVIIFGLVLGI
WTQLAVVGVGLGALVAASSTAFTVVKWLGVAYLVWLGIAQWRAPARPMVA
VSDSGELVSRRSMILRAWMINVVNPKGTVFLLAVVPQFMNLSQPLLPQYL
TIGATLAFTDMVVMAGYTALAAKVLGALKEPSHIRVMNRTFGSLFVLAGS
LLALFKRAV
>Rfer_0518 thiamine pyrophosphate enzyme-like TPP binding protein
MNLTESLLHALKAHGARQIFGIPGDFALPYFRIIEKSAILPLYTLSHEPG
VGFAADACGRISGGLGVAAVTYGAGAFNMVNAVASAYAEKSPLVVLSGGP
GKGESQSGLLLHHQAKTLDSQFQIYKEITCDQVRLDDAERAPADIARALA
NCLRHSQPVYIEIPRDMVAEPCLPVTAQAALAVDPDALDACVTDILQRLA
QASAPVLMAGVEVRRFGLEAKVAELSSRLALPVVTSFMGVGLLAQTEAPL
VGTYLGVAGLPEVTQLVENSDGLFLLGVIVSDTNFAVSEKKIDLRKTIRA
LAGQVTMGYHTYSHIPLAALVDHLLLRVPATDKKFSVKHQSYPHGLVADA
ASITPTDIATAVNDLMARHGKLPIASDMGDCLFTALDIEHTALIAPGYYA
TMGFGVPAGLGLQAATGERPLILVGDGAFQMTGWELGNCRRYGWDPIVLL
FNNASWEMLRTFQPESGFNDLDHWGFAEMAAGMGGDGVRVNTRAELKAAL
DKAIATRGRFQLIDITIPRGVLSETLSRFVAGVKRLSTPQ
>Rfer_3883 Ornithine cyclodeaminase
MKHPTLLQTPTQTQFFSVQDVANLVSQVGIAATLTRLADYILDDYRRWQD
FDKCARVASHSLDGVIELMPIADAKTYAFKYVNGHPKNTRLGLPTVMAFG
VLADVATGIPMVLSELTLSTALRTAAMSVVAARALARPNSKCMALIGNGA
QAEFQALAFHHLLGIEEIRLFDTDALASRKLMRNLQHTGLRLSACTSIAQ
AVRGADIVTTVTADKTNATILTPELMEPGMHINGVGGDCPGKTELHPDVL
RGSAVFVQYEPQTRIEGDLQQMPADFAVTELWRVLRGEAPGRTSDGQITL
FDSVGFALEDYSALRYLRDTAFELGLGQRLLLLPELANPKDLFSLIRPAS
RGQADAARRDAEPALASAA
>Rfer_0403 peptidase M20
MAVRRGMITGIVDKPRKEFGMNVRIPAPALNTTQALNQISRAWDDDLVAQ
LSDYIAIPAKSPMFDADWVQHGFIDTVVRNAASWVEAQKVAGLTLEIIRL
PGRTPVLFFEVAASTGSANHAVSNQTVLMYGHLDKQPEVTGWRSDLGPWT
PKYEDGKLYGRGGADDGYAIYAAITAIQALKSQHVAHPRIVGLIETCEES
GSYDLPPYIDALRARLGDVALVICLDSGAGNYDQLWLTNSLRGMASGTLK
VEVLTEGVHSGDASGLVPSSFRILRHLLDRLEDSATGRLLPAPFHCEVPF
ERLRQAQATAAILGEELYKRFPWAHADCGGASQTMLPTTTDPLQALLSRT
WTPTLSVTGAEGLPELKSAGNVLRPFTAFKLSLRLPPLVEAGQAVQQLKA
LLEDNAPYQARVSFVPDSHASGWNAPSTAPWFEQALNAASQDYFGAPCGY
IGQGGTIPLMSMLSSGFPKAQMMVCGVLGPKSNAHGPNEFLHVPYAKKLT
AAVAQVIAQVP
>Rfer_1029 extracellular solute-binding protein, family 3
MIQSKKIISALAIALVAICTSVQADTLANIKQRNKVLVGIDLTFAPFGSM
DAAMKPMGSDVSAAKMLAKDLGVELEIVQLTGPNRVPYLLTGKVDMVISS
FSITPERKKVIDFSVPYSVSESVILAPKSVQITKLQDLAGKRIGLVRGNL
QENLLKPIAPEGMIPVRFDDDASNVVALLSGQVDALGGSKELLPNIAKQS
PEKQVESKLSIGILPHGIGIRKEDTSLLNWTNQWVMANLKNGRLSNSYKE
AVGFPLPDMSQFMPK
>Rfer_0165 Amidase, hydantoinase/carbamoylase
MATPPLTLDQLNAASLDDARAMVAGLYEHSPWIARAALQQRPFRSLAQFK
YALCQVATNAGKDAQLALLRAHPELAGRALADKSLTVESTHEPNKAGLTH
CTPAEFEKIQQLNSDYNARFGFPFILALRGPRGLGLQKAEIMATFERRLQ
SHPDHEFQEGLRNVHRMAEIRLNDRFGRSIERGNLVWDWQEALAQYSDPG
YAELGQLTVTYLTDAHRACAQRISNNMREAGCDKVHIDAVGNVVGRYKGT
GASPKALMTGSHYDTVRNGGKYDGRLGIFVPLACVQGLKRANKRLPFDLE
IIAFAEEEGQRYKATFLGSGALTGDFKPDWLDQVDADGISMRQAMKQAGL
CIDDIPKLKRIASDYMGFVEVHIEQGPVLSELNLPLGIVTSINASVRHTG
EMLGMTSHAGTTPMDRRRDAAAGVAELMLYVESRAAADSDSVGTVGILNV
PGGSINVVPGRCQFSLDLRAPTDAQRDAMASDVLARIEQIAKARGLHYHL
TETLRASAAPSAPAWQQRWEAAVAALGLPLHRMPSGAGHDAMKLHDLLPQ
AMLFVRGENAGISHNPLESTSSDDMQLAVQAFEHLLNSLAQELS
>Rfer_2044 succinyl-diaminopimelate desuccinylase
MPKTLHLAEQLIARPSLTPDDAGCQQIIAERLAPLGFSCETITSGPADFR
VTNLWAKRAAAPVKSAQHTTKLVVFAGHTDIVPSGPVQQWRCHPFTPTQF
DGKLYGRGAADMKTSLAAFVVAVEEFLTAQPDTALAIGFLLTSDEEGPAL
DGTVKVCEALQARGERIDYCIVGEPTSLERTGDMIKNGRRGTLSARLTVK
GVQGHIAYPHLAKNPIHLVAPALAELVGVEWDRGNAFFPPTSWQISNIHS
GTGASNVIPGAVVIDFNFRFSTESTPESLQTRLAAVLERHELDYELAWTL
GGTPFLTEPGTLVDAVVDAIKQETGLTTVLSTTGGTSDGRFIARICPQVI
EFGPPNASIHKIDEHINVADIEPLTNIYRRVLENLSAGLSA
>Rfer_1002 ABC transporter related
MSHLLEARGLRARYGNTRVLHGIDLDVDEGKVTTLLGANGAGKTTTLRAL
CRLMVQTSGTVTLAGSKIDALSTEQIARLGVGHVPDGRGTFMGLTTEENL
RLGVSSRNNRVGADEDMARIYGYFPRLAERKRQQAGTLSGGEQQMLAIGR
ALMGRPRLLLLDEPSFGLAPLVVKDIFSIMRRINKEQGVSILLVEQNARL
ALDLADSAYLLETGRVVLSGSAAEMRNNDAVRRAYLGE
>Rfer_2324 extracellular solute-binding protein, family 3
MHLSKLQTLTAVVATVGAFMSAPAHAGKTLDGIKARGQVVCGVNTGLAGF
GAADSAGKWTGLDVDVCRAIAAATLGDAEKIKYVPLNAQQRFTALQSGEV
DVLSRNTTFTLTRDASLGLHDTAVTYYDGQGFMVPVKSKIKSAKQLKGQT
VCVQSGTTTEKNLTDYSKANGLNIKPVVFEKLEAAENAYFTGRCIAYTTD
ASGLASTRNKVAKDPKEHIILPELISKEPLGPMVRRGDDEWFAIVKWVIY
GLLEAEEYGITQANLEGLKATSKDPVVQRILGTSEDSGKLLGLSKDWMAN
AIKATGNYGEIFERNVGPNSPLGLPRGVNNQWNKGGLMYAYPVR
>Rfer_2046 2,3,4,5-tetrahydropyridine-2,6-dicarboxylateN-su ccinyltransferase
MTQQLQSIIDAAWEDRANLSSAAAPKEVLDAVEHVISDLNAGRLRVATRE
SVGQWTTHQWIKKAVLLSFRLTDNQVMKAGDLGFYDKVPTKFAHLDEEAM
KASGVRVVPPAVARRGSYLAKGVILMPSYVNIGAYVDEGTMVDTWATVGS
CAQIGKHVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEGVIVEE
NSVISMGVYLGQSTPIYDRATDTVSYGRIPSGSVVISGSLPKNEGKYSLY
AAIIVKRVDAQTRAKTSLNDLLRD
>Rfer_3242 extracellular solute-binding protein, family 1
MNLRLLLLIVLVTLSLPGQAVETLRVLTWPGYADSDLVKLFEKQHGVRVE
VSFVSSDDVLRQKISANQGGDFDVFAANTAEMQHYINERLVVPLRLANIP
NTAQQLPRFRNLQSIPGITRLGEAYAVPYTYSEMGLIYDRKQFVQAPTSL
AAMWDPKYQGRVLAFDTSSHSFSIASMVLGGNPFRIEDKDFKGVVNHLIA
LRRNVLTFYTLPEESVELFRRHSAALLFANYGHQQLKLLRDAGADVGYVI
PVEGALAWLDCWALTRGAKNKELAESWINFMLDKKVSSELTRRQGLSNTI
EVDTDAADADKIIWLEPVEDDKRRAALWGRIISGDLPGRF
>Rfer_0186 major facilitator superfamily MFS_1
MSVGSVICSSAASGLRVRACNAVKMQVSFYGSTPMNRHLWLLAICQGLFL
TNNVTFIAINGLVGLSLAPLGWMATLPVMGYVVGGALSTGLVARTQHRFG
RKVSFQMGLLVALASSLLCAYAAVSRNFWLLCSATVVAGYYNANANLYRF
AAAELTTLAWREEAVSLVMAGGLIGAVLGPNLAAQTRTLTSVPFAGAYLA
LAGVALLAMLVLAFINFPPPPVKKSTGSGRPLGEIMRQPVFIVAAAAGAL
SFGVMNLLMAATPLAMQQCSLPFSDVALVLEWHVIGMFAPGFFTGHLIKR
FGTLTIMGVGVALNALCILVALSGVDLQQFLIALFLLGVGWNFLFTGSTT
LSLQTYSPEEKDRAQGALNFFVFATLAVSSLASGVLVTTRGWQLLNVGSL
LPVACTAAALVWLWLRQVRARVA
>Rfer_2689 Argininosuccinate synthase
MSNTILQNIPVGQKVGIAFSGGLDTSAALHWMKLKGALPYAYTANLGQPD
ETNYDDIPRKAMEYGAEKARLIDCRQQLAAEGIAALQSGAFHISTAGVTY
FNTTPLGRAVTGTMLVAAMKQDDVNIWGDGSTFKGNDIERFYRYGLLTNP
ALKIYKPWLDQAFIDELGGRAEMSAFMTEHGFGYKMSAEKAYSTDSNMLG
ATHEAKDLEQLSCGIRIVNPIMGVPFWKDDCVVKAEEVSVRFEEGRPVAL
NGVQYPDLVTLMLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGLAL
LFIAYERLVTGIHNEDTIEQYRDNGRKLGRLLYQGRWFDSQAIMLRETAQ
RWVARAITGEVTLELRRGNDYSLLNTESPNLTYAPERLSMEKVEDAPFSP
LDRIGQLTMRNLDIVDTRAKLAIYAKSGLLSLGVDGDFLSLANDANK
>Rfer_0343 protein of unknown function DUF6, transmembrane
MKANFYALAAICLWASLAALGVLLKHVPPFLLTGIALGLGSILAWPFVFK
NPRQWRVAPSTLFLGVSSLFGYHFFLFIALRMAPAVEVNLINYLWPLLIV
VLAPLYVPGIRLRAVHFMAAALGFAGAALAIWGGRVSTDASANLTSSATG
WGYLLALAAAIVWANYSLQTKRVALSGKGFSTTAIGLFGLLAGLLSLACH
WVLEPPVQLTGHDWLLLLAMGLGPLGAAFFLWDKALKLGDVRHVGILSYL
TPLASTVLLMQVTGRALSWSVALAAALIIGAALLGTRKN
>Rfer_2464 FAD dependent oxidoreductase
MNIVILGAGLMGRLLACELARAGHQLELFDAGGPEALNSAARAAAAMLAP
LAESAVAEDPVVKMGVYGLGRWPALIAQLDEPVFFQQQGTMVVWHRQDVA
EATRFSRQLDATAQRLPTLPIAQPLDASGIARLEPCLAAHFSQGLYLPGE
GQLDNHQLLAATLHQLQRLQVTIHWNSPRVLSDFSPGQPGQPHWVFDCRG
LGAHPQWSALRGVRGEIITLLAPHVKLSRPTRLLHPRYPIYIAPKQDGYF
LVGATEIESDDLSPMSVRSALELLGAAYTVDSGFAEARIVELVAQCRPAL
PDNLPCIRQLGPRVMQINGLYRHGYLMAPALLDVALELFETGASPLANDF
ALSIHQLP
>Rfer_2031 Twin-arginine translocation pathway signal
MRVYPSEWTRRSLLRGAVSLAACTAASAWPQSGKSAGAPRMLVVAQVVDN
TPSQLDVSRDFLIGSRAAWQEVNKTGGVNGRSIQHLVLEVDGSSTSLRAA
LETIKKTANCVVLSGTAGDRAASQLVALLKQDQHDIAHVAPWLQNSDLDG
DNRTFPIFASRQDQIAQAIKSLSLMGVPEMGAVYASEQEYSLYRDDVERA
SAALKIKLMSFKPGAGLAQVGKSLNADTPRILLFMGGTPELMQFTQSIDQ
QARQRYLVALADVNLQTLMQMGASRHTPIMATQVVPMVNSPSPLVKSYRQ
TLARLFDEPPTPQSLAGYIAARYTSAVLGTVEGVVTRQTTLQAFQQRHAV
DLSGFRVSFNTQGRGGSYVTQSMLTPDGRLVG
>Rfer_2682 O-succinylhomoserine sulfhydrylase
MTDKKLPAQLHRDTLAVRAGVERSQYGENSEALYLTSSFVQPDAETARKR
FAMEEDGYTYTRVSNPTVSGMEQRLAALEGTEAAIATSSGMAAVLLLGMG
LLRAGDHVVCSQSVFGSTLRLFATEFAKFGVTTTFVSQTDVAQWQAALQP
NTRLLFAETPTNPLTDICDISALARVAHAGGALLAVDNCFCTPALQRPIE
YGADFVIHSGTKYLDGQGRVVAGAICCSQKYVNDVFWPINRTVGMVLSPF
NAWVVTKGMETLSLRMKAQCDSALDLANWLQDQPQVARVYYPGLASHPQH
ALAMRQQSGLGGAVVSFDVRAPDATQARSNAFHVIDSTQVCSITTNLGDT
KTTIAHPATTSHGRLTEDQRQAAGIGQGLIRMAVGLDHIDDLKADLLRGL
QTLSALK
>Rfer_3103 extracellular solute-binding protein, family 5
MTKPIKPLRAKALAGGLLTLLALASAGSALAAKDVVLAIGGQPETLDPYN
TNTTLTTAVTKSFYQGLFEFDKDLKIQPVLAESFTVSKDGLVYTFKLRQG
VKFHDGTDFNAEAVKVTLDRVLNAENKLARTNQFNRIEKVEVESPLTVRV
TLKEPFAPFINSLAHASAVMMSPAALKKYGSKDIAFNPVGTGPFTFVEWK
QTDFVKGKKFDGYWKKGYPKVDTVTWKPVLENSTRAAMLQTGETDFAFPL
PYEQAAELKKNAKLDLMTGPSIITRYISFNMLQKPFDNVKVRQAINYAIN
KEALVKVAFSGYAFPAQGIVPQGVKYAHKMAPWPYDPKKARELLKEAGYA
NGFESVLWGAYTNTTTQKTLQFVQQQLAQVGIKITVLALEPGQRTDWVQA
APDSKTAKVRMYYAGWSASTGEADWALRPLLATESWPPKLNNTAYYSNSK
VDADIANALKSVDEKEKTALYRDAQEQIMKDAPWAPLVTEQNLYATSKRL
SGVYVMPDGSIHSEEVAVK
>Rfer_2138 protein of unknown function DUF6, transmembrane
MVAVTLMWSIAGVVTRHLEQARSFEVTFWRSFFTVLSLLVILPLFLGRGV
FSRMRSGGSALWISGVCWSGMFTFFMLAITLTSVANVLITMALGPLFTAL
AARLFIGHRIALRTWVAIVVAGGGIAYMYGSQITQGGSLLGTLVALCVPI
SGAANWTVTQHSHAQGHDVDLIPAVLIGAVLSSLVTLPMALPFQASAHDL
VLLAGLGLVQLAIPCALAVLCTRVLKAPEVALLGLLEVIFGILLAWVGAG
EVPGPNVLLGGTLVIGALAVNELIGWRNRA
>Rfer_0163 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
MVQFSLWDIFTFLLGALRWTAALSLIAFIGGGLVGLGLLMLRFAKLRGAA
TAVAWYVQIFQGTPLLMQLFLVYFGLALLGMDTSPLVAAAICLTLYASAY
LTEIWRGCVNAIPKGQWEASTSLALNFTQQMRHVILPQALHVAIAPTVGF
LVQIIKGTALASVIGFVELTKAGQMISNATYQPFLAYIFVGLLYFALCYP
LSWWSQRLENRRLA
>Rfer_1913 threonine synthase
MNYISTRGDMSRKHFCEILLEGLAPDGGLYLPESYPHVDDATLTRWRAVY
HQEGYAELAFEILSLYIDDIPAPDLRSICHKTYTAEVFGTGEIVPLRHLE
NGLWLEALSNGPTLAFKDLAMQLLGNLFEYELARRGEELNILGATSGDTG
SAAEYAMRGKKGVRVFMTSPANRMSPFQQAQMFSLLDENIHNIAVDGVFD
DCQDMVKAVSNDLEFKRKYKIGTVNSINWARLLAQVVYYFAGYFQATETN
AEKVSFTVPSGNFGNVCAGHVARMMGLPIAKLVVATNENDVLDEFFKTGV
YRVRSSADTHETSSPSMDISKASNFERFVFDLLGRDGARVKALFGDALAR
TGRFDLSQHPAFNQSTLRYGFQSGQSTHADRLATIKDSFERFGMLIDTHT
ADGVKVAREHLQPGVPMIVMETALPIKFAATIVEALGREPDRPAKFVGIE
ALPKRVTRMAADVEAVKAYIAEHCA
>Rfer_2120 ornithine carbamoyltransferase
MKHYLQFSDLTALDYAYLFERAALIKKKFKAYEKHHPLADRTLAMIFEKA
STRTRVSFEAGMYQMGGSVVHLTTGDSQLGRAEPIEDSAKVISRMVDLVM
IRTFEQTKIERFAQHSRVPVINGLTNEFHPCQILADIFTYIEHRGSIAGK
TVAWVGDGNNMANTWLQASEILGFKVHVSTPGGYEVDQSIAGLRSSDSYR
VFQDPMQACAGADLVTTDVWTSMGFEAENEARKVAFADWCVDLDMMHAAK
PDALFMHCLPAHRGEEVQAEVIDGAQSVVWEEAENRMHVQKALMEYLLLG
RL
>Rfer_1271 glutamate 5-kinase
MTKNFASVVLRDARRIVVKVGSSLVTNEGRGLDETAIGEWCRQIALLVQD
KREVIMVSSGAVAEGMKRLGWATRPHLIHELQAAAAVGQMGLAQMYETKL
RENGLGSAQVLLTHADLADRERYLNARSTLLTLLKLGVVPVINENDTVVN
DEIKFGDNDTLGALVANLVEADALVILTDQKGLFTADPRKDSSATLVHEA
KSGDPALEAMAGGAGSNLGRGGMITKILAAKRAAGSGASTVIAWGREPDA
LVRLSQGDAIGTLLVAQTQKTQARKQWIADHLQLRGSVTVDAGATQKLRG
QGSSLLPIGMTTVDGDFSRGDVIAIRDLQGVEIARGLANYASVEARLICR
KPSTEFEKLLGYAAEPEMVHRDNLVLTR
>Rfer_1079 inner-membrane translocator
MSSAMNPLTDSKQMTKAAKFLRITYIALLILALVAPMIGLYPVFVMKLLC
FALFACAFNLLLGFTGLLSFGHAAFFGSAAYITGYLIKSHNFTPELGIVA
GMIGSGLIGLVVGYVAIRRQGIYFAMITLALAQMVYFVCLQAPFTGGEDG
LQGVPRGALFGLLSLQSDTAMYYLVVAVFVAGFLAVSRIVHSPFGQVLKM
IRENEPRAISLGYQVDRYKLMAFVLSAALAGLAGSLKTLIMGFATLSDVH
WTMSGEVILMTLLGGVGTFFGPVMGAGIVISLQDTLADKVGSWVNVIIGV
IFVLCVLAFRKGVVGELQAWLERRRSVAAAPKA
>Rfer_3884 arginase
MNTSAFSPDTALAPGNISLIGVPTDIGAGMLGARMGPEALRVAGLAQALT
QLGLDVKDCGNLHGPANPWLQAVNGFRHLPQVVQWNQLLHEALYCELQAR
RLPIMLGGDHCLAIGSISAVARHCRDQGKKLRVLWFDAHADFNTATLTPS
GNIHGMPVACLCGHGPQELIQIGGHVPALQPKQIRQIGIRSVDAGEKRLV
HDMGIEVFDMRYIDEMGMRHAMELALALVDANTHLHVSLDVDFLDPAIAP
GVGTTVRGGPTYREAQLCMEMIADTGRLASLDVVELNPALDVGNQTAELA
VDLIESLFGKSTLMRSSAAKR
>Rfer_3402 urease, alpha subunit
MATIGRRAYAEMFGPTVGDRVRLADTNLIIEVEDDYTLRAGGYGEEVKFG
GGKTIRDGMAQSQRSRAEGAVDTVMTNALIIDHWGIVKADIGLKDSRIVA
IGKAGNPDTQPGVDIIIGPGTEVISCEGSIVTAGGFDSHIHFICPQLIEE
ALSSGITTMTGGGTGPATGTFATTCTPGSWHIERMLQAADAFAMNLGFMG
KGNASLPAALHEQINAGALGLKLHEDWGTTPAAIDNCLNVAELTDTQVAI
HTDTLNESGFVEDTLAAFKGRSIHTFHTEGAGGGHAPDIMKLVGEPNVLP
SSTNPTRPYTVNTLDEHVDMLMVCHHLDAAIAEDLAFAESRIRKETIAAE
DILHDLGAISIMSSDSQAMGRVGEVIIRTWQTAHKMKAQRGWLAPPPERS
EPVEKLQRNDNYRVKRYLAKYTINPALTHGMAHEVGSIELGKWADLVVWR
PAFFGVKPSLIVKGGSIAMAAMGDPNASIPTPQPVHYRPMFGAFGGALAR
GSLTFVSQAGLNAGIGARYGLSKTLSAVKNIRGIRKEHMVHNHYLPKMEI
DAQTYSVRADGELLTCEPAVSLPMTQRYFLF
>Rfer_3380 inner-membrane translocator
MLGHLIRLTACAIFLIACNAHSITADEAKAIASGEADARIEVLNKAVATA
DDKTAAFLQALSDDAVKVAADAVLVIKDGKGYDPVSGAEVPVPDVFEDVM
NNNRMRGELDSALAALKLFSKDEKTRIAAIKQLQSDADESKLPLIEKAFA
AEQNAQIKEQLGLVRAAALLNSADKAKRLEAAKLLSSSTQANTKTVLLAR
LAQETEPDVKSALQSTLRQVEASLAWGDRLGAIFSGISLGSILLLVALGL
AITYGLMGVINMAHGELMMIGAYATYVVQALFQKYLPGAFDWYLLASVPV
AFLASALMGAALERSVIRFLYGRPLETLLATWGISLMLQQLVRSFFGAQN
VGVENPSWMSGGVQVLGNLSLPFNRLVIVGFAVFVLLAVAWLIGRTRLGL
FVRGVTQNRPIAACMGVNTARIDTYAFALGSGIAGLAGCALSQVGNVGPD
LGQGYIVDSFMVVVLGGVGQLAGTVYAAMGLGILNKFLEGWTGAVLAKIA
VLVFIIIFIQKRPQGIFAMKGRSAEA
>Rfer_2844 selenide, water dikinase
MKLQQEKNLTTSLTPSPATTPPKQPRLTSLSHGGGCGCKIAPGVLSEILK
GITAMPIPKELMVGIETADDAAVYRLNDEQALIATTDFFMPIVDDPFDFG
RIAATNAISDVYAMGGKPILALALVGMPINVLSTETIAKILEGGASVCRA
AGIPIAGGHTIDSVEPIYGLVALGLVHPSRVKRNADAQVGDRLILGKPLG
VGILSAALKKEKLDGPGYAQMIAVTTQLNTPGPELAALSGVHAMTDVTGF
GLAGHALELARGAHCTVQIDWARVPLLAGVRELALQGIVTGASGRNWTAY
GQEIALPTGFAEVDQALLSDPQTSGGLLVSCAPAAVDAVLAIFRQHGFDA
ACEIGEITAGAGTPKLQLR
>Rfer_1863 cysteine desulfurases, SufS subfamily
MNNTSAVTMPPAFNVARVRADFPILGLTVAGKPLVYLDNAASSQMPQPVI
DRLVRYQSTEHANIHRAVHYLSETATAAYEAARTRLQRFINAREAREVIF
TSGTTEGINLVAHGWGRQNIRAGDEIILTVLEHHSNIVPWQMLALEKGAI
LRVVPINDAGELLVDEYEALFNERTRLVSVGHVSNALGSINPVKQMIAFA
HARGVPVLVDGAQAAPHLAVDVQDLDCDFYAFSGHKMCGPTGIGVLYGRA
ALLEAMQPFKGGGDMIHTVTFEKTTYAPIPNKFEAGTPPIAAAIGLGAAV
DYLSSIGMPAIAAHEHELLRYATEHLSALPGVRLMGTAKDKAAVLSFAVQ
GIHPHDMGTLLNQEGVAVRTGHHCAQPLMVRLGVVATSRASFAFYNTLAD
VDALVAGIRSVQKVFA
>Rfer_2947 histidinol-phosphate aminotransferase
MSALDAGRRPVIRPDVQSMHAYAIQDSTGMVKLDAMENPHRLPPALQQAL
GQRLGALALNRYPDARVNNLRQALAHYATMPEGFDLMLGNGSDELISLLA
LACAVPASSANGFKKASVLAPVPGFVMYALSAQLQGLDFHGVALTEDFEL
DEGAMLAAIKEHQPTLTYLAYPNNPTANLWNDAVIESVIEAAGAQGGLVV
IDEAYQPFSSKSYIDRLARHHHVLLLRTLSKFGLAGIRLGYLMGRRELIA
EIDKVRPPYNVSVLNCECALFALEHQEVFAAQALDLRAQRALLFEELAKL
PGVHAYPSEANMLLVRVPDAQKTFEGMRLRKVLVKNVSTLHPLLANCLRL
TVGTKDENQQMLAALRNCL
>Rfer_1788 tryptophan synthase, beta subunit
MFEYQQPDPRGHFGIYGGSFVSETLTHAINELKAAYAKYQFDPAFVAEFN
YELAHFVGRPSPVYHADRMSREQGGAQIFLKREDLNHTGAHKINNTIGQA
MLARRMGKPRVIAETGAGQHGVATATICARYGLECVVYMGSEDVKRQSPN
VYRMNLLGATVVPVESGSRTLKDALNEAMRDWVANVDNTFYIIGTVAGPH
PYPMMVRDFQSVIGKECLVQMPEMLQAAGCHTTQPDAVVACVGGGSNAMG
IFHPYIAHEATRLIGVEAAGLGMDSGKHSASLQRGSPGVLHGNRTYVLQD
DNGQVTETHSISAGLDYPGVGPEHAFLKDIGRAEYVGITDQEALAAFHYL
CRTEGIIPALESSHAVAYAMKLAKTMRPDQSILVNLSGRGDKDIGTVADL
SHADFYCRPSCKGQSVKGADNAQPSANQQVVKVAQ
>Rfer_1327 O-acetylhomoserine/O-acetylserine sulfhydrylase
MKIETLAVHGGYTPEPTTKAVAVPIYQTVAFAFDDTQHGADLFDLKVAGN
IYSRIMNPTCGVLEARVAAMEGGIGALAVASGMSAIAYAIQTITEAGDNI
VSASTLYGGTYNLFAHTFPQMGIEVRFADYRDPASFAKLIDARTKAVYCE
TIGNPLGNITDLAALATVAHAHGVPLIVDNTVASPYLCRPFEIGADIVVH
SLTKYLGGHGTTIGGIIVDSGKFPWAEHKERFKRLNEPDVSYHGVVYTEA
LGAAAYIGRARVVPLRNMGAALSALAAFQILQGIETLALRMDRICDNALR
IAQHLQAHAKVGWVNYAGLPDSADHALVQKYLGGRASGIITFGLKASDSL
AAGARFQDALKLFTRLVNIGDAKSLACHPASTTHRQLNAEELAKAGVKPD
MVRLSIGIEHIDDLLDDLDQALAAV
>Rfer_0127 Allophanate hydrolase subunit 1
MSLPPARYSFGGDEHIFVELNHEMSLEAFFKGMSITNAIAQRKIAGVTEI
CPANASYQVRFDPDLMAPDKLMEILKSIEIELGDGALELNTRIIEIPVFY
NDPWTNETQQRFRERHQDPTSTDLEYGARVNGYANVDAFIAAHAASPWFV
SMVGFVAGLPFMFQMVERTKQIQVPKYLRPRTDTPKLTIGHGGCFGCIYS
VRGAGGYQMFGITPAPIFDPQQSLPYVKDFMVFFRPGDIVKFKPINRSEY
DAALTKVQDGSFDLRIREVKFSLQDFVKDPSAYNQQLTETLYGN
>Rfer_0984 binding-protein-dependent transport systems inner membrane component
MPQYLLRRFIAAIPVMFLVSLMSFAVIWLVPGDPASSFLDASATQEQIAR
IRQELGLNQPLWQQMLHWYGRVLTGDLGQSILLHRSVGEALLERLPVTLS
LAALALVLAAVLGISAGIFAAMHRGGIADRTVMTASLLGLSVPDFWLGLV
MIVVFAVGLGWLPSGGFVPITESVVGWMRTMTLPALTLALVQTGFIARMT
RSAMLDVLHQDFIRTADAKGLKHGFVVLRHGLPNAMLPILTVLGIIAGSL
LGGAVVVEQVFSLPGVGRLIIGAIMSRDFPVIQGGLLFLAAIYVVINLMV
DLLYAVVDPRVRL
>Rfer_2326 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
MTATIFQPIAARPAPVDTEGPVAWVKANLLADWKTTLATLIVGGVLLWLV
PQILNWAVFKAAWLPNYEACRAPGVGACWGVIAEKYRVIIFGRYPFEEQW
RPLIATVLLTGLLVASCVRMFWKTWLPLLWVVVLAAFFTLMYGNSLGLTQ
VDTDRWGGLPLTILLASLSLVMSFPIALLVALGRRSSLPAIRSFCTIYVE
LIRGVPLISVLFMASFMFPLFMPQGFKIDVLIRVLVGITLFAAAYSAEVI
RGGLQAIPKGQVEAAATLGLSYWQTQRKIVLPQALAMVVPGIMNNFISTF
KDTSLVTIVSLYELTGAMSLALNSDSNWRPFTIEGYIFIALIYFVFCFSM
SRYSHWVEKQVNKSKLR
>Rfer_0292 ABC transporter related
MGELLKVENLSAGYGEAVVLHGVSLSIAEGQTLALLGRNGTGKTTLINTL
AGATRQHGGSISLGTGATSVTLHKLPSHERAAAGIGWVPQERNIFKSLTV
HENLTAVARPARAGRASRPWTPERVYELFPRLAERKSNLGTQLSGGEQQM
LALGRALVLNPTLLLLDEPCEGLAPIIVQELLRAIRRITRDEGLSAIIVE
QHPQAILAISDTAAVLDRGTVVHTGTARSLQEQPALLDKLLGVAR
>Rfer_1949 extracellular solute-binding protein, family 5
MTCSKSSARRKFGLKPAVLCAIALPALLALAPAAAKTLVYCSEGSPENFY
PGVNTTGTSFDAGVQIYDTPVQFERGGTKVLPALAEKWDISKDGTEYTFH
LRQGVKWQSNKNFKPTRDFNADDFIFSIERQWKQADPYFKVTSSNHSYFD
DMGMPKLLKSVDKVDAYTVKITLNKPEAPFLANMAMPHNGVQSKEYAIAM
LKAGTPEKLDQEPVGTGPFSLVQYQKDALIRYKAFPQYWAGKAKIDDLIF
AITPDASVRWAKLQKGECHVMPYPNPADLEAMRKNTSIKVLEQPGLNVGY
LAYNTTKKPFDDVRVRKAINMAIDKKAIISAVYLSTGIPAINPIPPTMWS
YNKSVKDDAFDPAAAKKLLATAGYPDGFSTDLWAMPVQRPYNPNARRIAE
LMQADLAKVGVKAEIKSFEWGEYRKRMQAGEHQMGMLGWTGDNGDPDNFL
NTLLGCTSAKANGSNVAKFCFQPFEDLIQKAKITSNLAERTKLYEQAQVI
FKEQAPWFTIAHAVALKPVRNEVVDFKISPFGTHVFYGVDIK
>Rfer_2950 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
MLLIPAIDLKDGHCVRLKQGDMDQSTTFSEEPFVMARNWVDKGARRLHLV
DLNGAFAGHPKNELAIRKILKDVGSEVDVQLGGGIRDLDTIERYLDAGLR
YVIIGTAAVKNPGFLQDACTAFGGHIIVGLDARDGKIATDGWSKLTRHDV
VDLAKKFEDYGVESIIYTDISRDGMLSGINIEATVRLAQALTIPVIASGG
LSGMADIEALCAVENEGIEGVICGRAIYSGDLDFEAAQERANELNG
>Rfer_1855 binding-protein-dependent transport systems inner membrane component
MVKNRVVAVLVLAGLVAALGLPFLTHAPNRLAAGTGIPLAQLVSATAGRP
IGSWLAWLVLLPALLLVLAIFTRPTRSTQMIVCLAATLLLTGLAGLAADH
ATQLAGQSGAIARTSLGGAFWLLAVFSWLAAADAIQRLALKPSWRLLGAG
VVIVPLGLLLGGGAFKDLSLLKEYANRQDVFTTALWQHVQIVLASLLPAL
LIGVPLGLASNRSRALRPPLFAVLNVIQTVPSIALFGLLMAPLALLAASV
PVLAQLGIKGIGLAPAVIALTLYALLPVVRSTAAGLSQVPAPVIEAARGM
GLTARQIFWRVELPLALPIFLSGLRVATVQTIGMAVVAALIGAGGFGAIV
FQGLLSGALDLVLLGVLPVVAMAVAVDALLKALALALEPDND
>Rfer_3890 Alcohol dehydrogenase, zinc-binding
MNMKHGSPYGTHRVLEPLGVLPQGAWKIDNSMEIYDNEILIDVSALNIDS
ASFTQIKSEAHGDEAKVAEIVRGIVAQRGKQHNPVTGSGGMLIGTVAQIG
PALVGKCDLKVGDKIATLVSLSLTPLRIDEISKIHLQKDQIEINGQAILF
ETGLYAKLPDDIDEKLALAILDVAGAPAQTARLVQPGDTVVVIGGGGKSG
TLCMYEAKKRAGADGCVIGVSPFEKDCRRMKDLGWADHALQVDATNALAL
MEAVAEVTDGKMADVVINCVNIPNTEMGSILATRQQGKIYFFSMATSFTA
AALGAEGVGKDVEMIVGNGYATGHAEFALGLLRESASLRKLFEQLYV
>Rfer_2671 aminotransferase, class I and II
MRISDRAQRIEPFYVMEVAKAASALAFDVARSASPMIFLNIGEPDFTAPP
LVQEAACRCVRDGLTHYTQATGMSPLRERISDWYLSRFNVQVPASRIVIT
AGASAALQLACLALIESGDEIIMPDPSYPCNRHFVSAADGSAVLLPTTAA
ERFQLSADKVQAAWGPKTHGVLLASPSNPTGTSIAPDELRRIHQVVSNKG
GITLVDEIYLGLSFDAQYGQTALALDDNIISINSFSKYFNMTGWRLGWLV
VPEPLVPVIERLAQNLFICPSTISQYAALACFESSSLLEYERRRAEFKAR
RDYFIPELNALGLTVPVMPDGAFYAWADCSAACRAKGLKDSWDLSFDLMQ
QAHVAVTPGRDFGTADAHNFIRFSTASSMPQLHEAIQRLKAYLEPLK
>Rfer_0162 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
MIEFNFGTVLAQWPMLLRGLGLTVTLTAFSALLGTLAGTACAWARLHGGP
MLKRVVGAYVELVRNTPFIIQLFFIFFGLPSLGLRLSVEMASVLAMVLNL
GAYACEIVRAGLQTTPRGQLEAAMSLALTPWQTFSRVVLPPALARIWPAL
VSQIIIVMLGSAVCGQISAEELSQAANLISSRTFRSFESYIIVTGIYLLL
AIALRQLLYWVGPRFIFSSR
>Rfer_2005 Lysine exporter protein (LYSE/YGGA)
MSFYGVTDLWTYVVGAFGIILLPGPNSLYVLSVATVRGVRAGYQGAFGVF
VGDTILLLCTALGAASLLRTHPAVFMVVKYAGAAYLFWVGLNLLRGAIAG
LRARADVLPSTAAAPAPKPAAAAAHLQRPFRRALLISLLNPKAILFLLSF
FVQFIDPAYAQPEVPFLILSAILMSFSAAYLTALIFAGARLAQAFSQRKR
LSSGLSSLVGGLFVWFGAKLATASLN
>Rfer_1247 3-dehydroquinate synthase
MSDELIIQSHKGSYAVNFNESLLDDVTELFENTPHFLIDANVARLYKIEL
ASVINHPKVIVIEATEENKSIERVIPVIARLVANKARRGDTLVAIGGGII
QDITCFIASTLLRGMAWRFVPTTLLAQADSCIGSKSSINLGATKNILGTF
NPPEKIHLCSKFLDTLDQKDIYSGVGEILKVHAIAGKETFDLLAATYDQL
FTDRAVLRRYIGSALRIKQKYIELDEFDRGIRNIFNYGHSFGHAIESATN
FGVPHGIAVAMGMDMANAIASGRGLTSIETYQRMHGVLKKNYASYASANI
QTDALMTALMKDKKNTATQLVLILPIGNDAEIQRVEVVADEQFGDQCEVF
LKALNK
>Rfer_3314 Anthranilate synthase component I and chorismate binding protein
MRAFIDFPASLPAAPGGVQSARWSARFEAPLQVLTAWQLHEVPAVLQQVQ
QQARAGRWCVGELAYEAASAFDAALVTQQACPDWPLARFAVFDRPFPESQ
TASPPPVAPSAGAAPHPMPEWTLASDFADYATRFERARQAMADGECYQVN
LTEALRARWPAADTRDIAAWFERLRAAQPGGYQAWLDWGEQQVLSLSPEL
FFDWRPDGAEGVLTCQPMKGTAPRHADPRLDAQACSQLRESAKEQAENVM
IVDLLRNDMGRIAQPGSVQVSRLFAVQALPTVWQMTSTVCARTRPGVGLP
ELFAAMFPCGSVTGAPKARAMHWIAALERGPRGVYCGAVGVVRPGGAATF
NVPIRTVALQRGSVAPGPPAAPAWHGHFGVGSAITFYAEPLAEWRELAAK
TRFLARAAQRFELLETLRLEAGHYWLLEQHLARMAGSAAYFGFEWRPADV
QACLDQLLGGREQGVYRVRLTCSSEGQVQAQAFDLQPSPQPVFFNLSAQA
LESMGREHEFVTHKTTRRQHYETRLRSAPGVFDTLMRNERGELTEFTRGN
LALKMAGRWRTPALHCGLLAGTYRADLLARGDLTEEVLTLADLQGAEEVA
FFNSVRGWLVARLVA
>Rfer_3210 protein of unknown function DUF6, transmembrane
MAVAPVSIGQIAPKKIAFGLSLAVLGAIAFSGKAIIVKLAYRYGVDAVTL
IMYRMLFALPIFALMAWWASRGKPAPTRQDWRGILGLGVTGYYLASFLDF
AGLAYISASLERLILYLNPTLVLLLGLLLYQRHIQRAQGWGMLISYCGVL
LVFGHEIQFLGRDAALGALLVFLSAVSYALYMTFSGELVQRLGSLRLVGL
ATTVACLLCIGQFVLLRPWSAALVAPEVIWLSILNATLCTAAPVLMVMMA
IERIGPSLAAQAGMVGPMSTILMGVVILGEPFTAWVAAGTVLVVAGIFVF
SRSGRPAST
>Rfer_1568 Prephenate dehydrogenase
MFEQLGLIGCGLMGGSFALALKRAGLVKRVVGYSKSPSTTERAYQMGVID
VEAPSALLAVSGADIVLIAVPVAASEATFKSIKHLVTPQMLIMDVGSTKR
DVVDAGRRALREQIGSFVPAHPIAGKEVSGVEHADADLYSGRQVILTPIE
RTLTIQLQKAVDVWSALGCRVVQMSPESHDAAFAAVSHLPHLISFALMNA
ISGQPQGKDYLSLAGPGFRDFTRIAASDAKVWRDIMISNREELLAQTKIF
QRNLQALELMISSGNGEALEGLIEQASLTRAHWRMAQQQK
>Rfer_3160 O-acetylhomoserine/O-acetylserine sulfhydrylase
MPGYSDPGFDTLALHAGAAPDPATGARAVPIHLTTSFVFESSDHAAALFN
LERAGHVYSRISNPTNAVLEQRVAALEGGIGAITTASGQAALHLSIATLM
GAGSHIVASTALYGGSQNLLHYTLRRFGIETTFVKPGDIDGWRAAVRPNT
KLFFGETVGNPGLEVLDIATISAIAHEAGVPLLVDSTLTSPWLIKPFDHG
ADLVYHSATKFLSGHGTVIGGIVVDGGTFDWDKSGKFPELTEPYAGFHNM
VFSEESTVGAFLLRARREGLRDFGACLSPHSAWLILQGIETLSLRMERHM
SNTRKVVEFLASQPFVARVGHPLLDSHPSHALAQQLLPRGAGSVFSFDLN
GSREQGKKFVESLKVFSHLANVGDCRSLVIHPASTTHFRLSDEALAAGSI
TQGTIRLSIGLEDPDDLIDDLKRALKTAEKAGA
>Rfer_3399 urease, gamma subunit
MELTPREKDKLLLFTAGLLAERRKARGLKLNYPEAVALISAAVMEGARDG
KTVAELMSFGRTILTRFDVMDGIAEMIPDIQVEATFPDGTKLVTVHQPIV
>Rfer_3601 Indole-3-glycerol-phosphate synthase
MTDILEKIVAVKRQEIAAAIARKPLTAMRADAESRVLTRDFVAALRGKIA
AGQPAVIAEIKKSSPSKGVLREDFIPADIAQSYAEHGAACLSVLTDLQFF
RGCIDYLKQARASCPLPVLRKDFMLDAYQIYESRACGADAVLLIAAILDD
AQMKDLEAIARSLDMAVLVEVHDAPELARALQLKTPLIGINNRNLKTFEV
SLDTTLTLMRELPADRLLVCESGIHTRDDVLRMGAAGVNAFLVGEAFMRA
PDPGLALAELFATA
>Rfer_2588 inner-membrane translocator
MTELILQALYSGVLQGGSYALIALGLALVFGAMKVINLAHGELVLLSAYV
AYSVESGLGWNPIFAIPIALVVVCLASVMVYFVVGRIKKDREINSLILTY
GIGVILTNLILLIWKADVRSTGSTWLQEAIVIGPFYSMRSEVLFFIVSLV
MMGGLWWWLSRSWYGRAVRAVSSNRDAAKLMGIDPGYTELVSFVVAGILA
AVAGVALFSYGVVSPAYGSVLTVKAFIITVLAGIGSIPGVLIGAVLLGVA
EALTVTLASSALQELVGMGLFLLVLFVMPSGLFGAKGRRG
>Rfer_1897 diguanylate cyclase/phosphodiesterase
MSAWVILFSVAVYLGLLFFIAYRGDKAADAGRSLIASPYVYALSLGVYTS
AWTFYGSVGRAATSGIGFLPVYLGPTVMIALWWMVLRKIIRISKDNRITS
LADFISSRYGKSAALAGLVTVIALVGVTPYISLQLKAISTSFGILRSYPD
ILLLAPPQPPQSIWHDTAFYAALILAAFTIVFGTRKIDAAERHEGLVAAI
AFESLVKLLAFLAVGIFVTWGMYDGVRDIFARAAQVPRIAEVFTIGGSTE
AYRGWTSPADAATRLALAPGTVMDIYQSWAELFSTAFVGMLAIMFLPRQF
QIAVVENVDEAHLNKAIWLFPLYLFLFSLFVLPIAMGGLLHFGTSVNPDA
FVLTLPLAGQQKALALLVFLGGFSAATGMVIVESIALSTMVCNDLVMPIL
LRIKALRLTERADISALLLAIRRITIVLGLLLGYTYYRLAGEAYALVSIG
LISFAAVAQFAPALLGGIYWKGGTRSGALSGLGAGFLVWAYTLMLPAFAR
SGWLPMALLEHGPFAIAQLRPLALFGLDGLDEISHAMLWSMLANVGAYLT
VSIMSGQSLVEQTQAALFVDVFKHGRGAERVWRASGSLLDLHTLMVRFLG
AENARQALVAYARQRGLEWPQEIDAELSRYCEAQLAGAIGTASARVMIAS
VIEEELLRDSLTGLPNRALLLTRIDDAMKRIQIESRRGFALVFLTLDRFR
TITDSLGGAYGDQLLIAIAQRLGTGLRPGDTIARIGGESFAILLDETKDA
EVAARYAEQLQSALAVGFNLEGHELFTTASIGIVLGHSGYVDAGELLRDA
ETASHNAERRGGACYELFAADMRERVVALLEMETELRRAVAHGEEFLVYY
QPVVSLQTGRLAGFEALVRMRRPDGKLVPPSEFIPLTEETGLIVSIGRWV
LTEACRQMHSWQQRYPDHPPMQISVNLAGRQFTQPALLQQIEAALAETGL
ATSSLKLEVTETLLMAHAEEAAVALEKLSALGIKLLMDDFGTGYSSLSYL
YRFPINTLKIDASFVRRMDVDRKSADIIQSIVTLAHALNMDIIAEGVENA
AQLAQLRALQVEYGQGYHFGQPLDAAAAEAMIVARPVW
>Rfer_3824 pyruvate carboxyltransferase
MSIPTRVKLVEVGPRDGLQNEKQDVPAAVKIELVHRLQAAGLKEIEVTSF
VSPKWVPQMADNAEVMAGINRLPGVRYSVLTPNLKGFEAALLTKPDEIVV
FASASEAFSQKNINCSIAESIERFAPVVDAARAAGIYVRGAMSCSVGCPY
EGEVAPARVGYLAGLMRSIGVQHVGVADTIGVGTPLKVQRAMEATLRHFD
LDDVSGHFHDTYGQALANTLICLQMGVWQFDASVAGLGGCPYAKGATGNV
ASEDVVYLLHGMGIETGIDLDKLIDAGQFISDFLGRSTQSRAGKALFNKR
PA
>Rfer_2130 binding-protein-dependent transport systems inner membrane component
MSNLTNPPEAASGRLPPEEAPPATRQSRFRGGPASTPPKSPSPGRRAWLR
FKRNRLGYWSLLVFVTLVLLSLLAEVISNDRPLLVRYQGTTYFPIVKEYS
EKTFGGDFDTATDYLDPFIRERLSQAGNWALFAPNPYGSKTLNYFAKEPN
PSAPGRDNWLGTDDRGRDLLAQLIYGFRVSVLFALALTFTGTLLGVITGA
IQGFFGGKTDLAFQRFIEIWGSMPELYLLIIFSAVFAPSLALLLILLSLF
GWMGLSDYVRAEFLRNRQLDYVRAARALGVSNWQIITRHLLPNSMTPVVT
FLPFRMSGAILALTSLDFLGLGVPPGTPSLGELLSQGKNNIDAWWISLAT
FCVLVLTLLLLTFMGDALRDALDPRKAEK
>Rfer_3504 Extracellular ligand-binding receptor
MKIKATVVLAALTLASTLATAQQGVSPTEITLGSIQDLSGPLAGFGKQAR
LGMLLAVDEINEQGGVSGRKLKLLVEDSGYDPKKAVLAAQKLVNQDKIFM
MVGHIGTAQNMAAMPVQFDKNVINFFPITAAREMYEPFHKLKYSFAATYY
DQMRRAVPQMVKDKGIKKVCTIYQDDDFGLEVLRGGEAGLKTINMDFTEK
TSFKRGATDFSSQVAKMKAAACEMVVLGTIIRETIGTIGESRKTGFNPIF
LGSSAAYTDLIHKLGGKAMDGLYATMTVQNPYTDEQSPQIRFWANKYKTK
FNEDPSVFSVYGYLIINTFANVASKAGKNLSTDSFIKVMDTLTVPPDIFG
STTITFSPTKRLGSDASRLSQIQDSKWKVVGPYITDGGPAKK
>Rfer_3379 inner-membrane translocator
MTTTSIQLPAPLLTRTGWSAFIVALIVVCAVAPALNLLVPKDSLFHLSDY
AVALVGKIMCYAICALAMDLIWGYTGILSLGHGVFFALGGYAMGMYLMRQ
IGLEGNYKSNLPDFMVFLDWKTLPWHWTFSDSFIATLFLVLAVPGLVAFV
FGYFAFRSRIKGVYFSIITQAMTFAAMLLFFRNETGFGGNNGFTDFKRIL
GIPIATPGMRMLLFVLTGVILLGFFLLARWLVAAKFGRVLQAVRDAETRV
MFSGYSPLGYKLTIWTISAMMCGVAGALYVPQVGIINPSEMSPANSIEIA
IWAAVGGRASLIGPIVGAFIVNGAKSWLTVAYPEFWLYFLGALFIGVTLF
LPDGVVGLIRKLKGNKA
>Rfer_0232 extracellular solute-binding protein, family 3
MSRLLRLFTLCLVFIGSLASAQAPLRVGSTPSGIPFTFLDTKTNKISGVM
VDLISEIGKDQGFAVEINAMAWGSLIAALQGNKIDVIAAAMYITPPRQEV
VDFSDPIYTYGEGLFVAASDAKDYKTYEDLKGEVVGVQIGTAYVKPLQAS
GLFKEVKVYDSISDIMRDVNLGRIKAGFGDYPIVAYQLGQGAFPETRLVK
GYKSVWVGSVGIAVRKGDKATIDKINAALRKFKADGTIDRVLARWNLK
>Rfer_2325 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
MNSKNPPKKNNWSWRSQAFRGLIYQVIAILAIGGFVWFLAHNTLLNMRVR
GIQSGFDFLKQAAGFDIGESLYPFDSAQPYWQAFLVGVTNTLRVAVLGII
LATVLGTLLGVGRFSRNALVRGLCQVYVELFRNIPVLLQLLLWYVILTEV
LPAASDAWVFGSFFLSKGGLNYPIPVWSIGQLWAAYGLIPGLVLAWVYRR
WAKRQFEATGRVRSMVWMPLVIVLAASLLGWLLGGAPTALNRPFKGDFSI
ENGGALTPEFLAVLLGLTLYTASFIAEVVRGGIQSVALGQSEAAAALGLS
RQQEMRLVMLPQALRVIIPPLTNQYLNLTKNSSLAVAIGYPDVVSIANTA
LNQTGRAVECISLVMLVYLSTSLGTAVLMNWYNSRSAIKER
>Rfer_3815 Extracellular ligand-binding receptor
MKLGHSVLGAFLLAAMAVTAHAQILIGQTAGFTGSVAAGVKETAEGAKLY
LDAVNARGGVNGQKIDLISLDDKFDPKLAAENARKLIEEQNVVAMFLTRG
TPQTEAILPFLDKYGVPLIAPSTGAMVLHTPVKKHVFNVRATYQREAEKA
IAHLASIGITRIAVVYTDDSFGADGVAGAQKGLSAAKLTPTAMEKFDRSK
PDFSQLAPRIAKTDAQAVMMIASATSTADCIKALKAAGSNAQFVTLSNNA
SGGFIKGLGDNARGVIVSQVFPQSIGFGLVKEATDLARAKNLTNVSPAML
EGFASAKVLVEALRRAGAKPSREHIQSALEGLRKFDIGGLDVSYSQEDHT
GLDFADLSIISADGKFRR
>Rfer_4062 ABC transporter related
MSQPIETEPQDGPVSATPLLRIDGLTLAFRGVRALSDVSFDVVPGSITAV
IGPNGAGKTSLFNTVSGFYRPNSGQVYFKGQDITRLPTPQRAKMGLGRSF
QNIALFRGMTVLDNIKLGRHAHLKSNVLDALFYMGRARREEAALRADIEE
RIIDFLEIDHIRHAPVSALSYGLQKRVEMARALAMQPEILMLDEPVAGMN
REETEDMARFILDVREEWGITVLMVEHDMGMVMDLSDHVVVLNFGQVIAQ
GTPAMVQSDPEVIRAYLGSGDVGDLRRKLQAGAIAEGVV
>Rfer_1836 ABC transporter related
MKINSKSFLLMVLGLAALGLYPVLVPNPYYIHLVETILIYAILLFGLDIV
VGYTGQVSLGHAGLFGVGSYTAGALFFKLGAPFLLAVPAAIGVTALFGAV
LALPALRVTGPYLAMVTLAFGTIIQILINEMTFLTEGPIGIKVHKPMFFG
HKLTEVEYFYVVAVLMVLALVVVHRILKSHLGRAFEALRDSPVACDCMGV
SVYRYKVYAFVISAALAGLAGSLYAYSEEYISPNTYNFELTIMFLLAVIM
GGRKTRSGALIGAVIVVMLPSLLSDIELFRKIATVLAIAVSGMAVYNFIR
KVKTVRELAVPVLATVAMAGFSFRLENITDWRLTIFGLMTLFVVYYLQDG
VVGFARELFARFAKPAAHASGKTPSIKVRAWTTPHKAAPVSAGPLLDAQQ
VLMQFGGLRALNQVDLSIAHGSIHGLIGPNGSGKSTMMNVLTGIYQPTAG
QVVFNGQSLAGQTPSHIALSGIARTFQNVQLFGEMTATDNVLVGLHHTFK
SNTLDVMLRTPRYLREDAAAREQAASLLDFVGLTDLSEEQARNLPYGKQR
MLEIARALGLGPRLLLLDEPAAGLPPADLPELTKMIQKIRDHGITVILIE
HHMDVVMGISDTVSVLDFGQKIAEGKPADVQSNPAVVEAYLGSGEGAH
>Rfer_2121 acetylornithine and succinylornithine aminotransferases
MNASFIEAASPHVMNTYGRLPIALSHGQGCRVWDVNGKSYLDALGGIAVN
TLGHNHPKLVPALQDQIGKIIHSCNYYHVPNQEVLAKKLVELSGMSNVFF
CSTGLEANEAALKLARKFGHDKGIERPEIVVYEKAFHGRSIATLSATGNP
KVQAGFGPLVEGFIRVPINSIESLQAATEGNTNVVAVFLEAIQGEGGINP
MHMDYLKAVRQLCDERDWLLMIDEVQCGMGRTGKWFAHQWAGIVPDVMPL
AKGLGSGVPVGAVVAGPKAAAIFQPGNHGTTFGGNPLAMRAGVETIRIME
EEGLLENAAQVGKHLAAALALALSAELTSGAIKEIRGMGLMIGVELAKPC
SALVQQCADNGLLISVTADTVIRLVPPLIMSATEADEVVSILCPLIKQLL
TDAS
>Rfer_3172 inner-membrane translocator
MDTFIQQIINGLVLGSMYALVALGYTMVYGIIGLINFAHGEVLMVGALTS
WTIIGWMQEAMPGTPGWLILLISLIIACVVSATLNFVIEKVAYRPLRDSP
RLAPLITAIGMSLLLQTLAMIIWKPNYKPYPTLLPRTPFEIGGAVITPTQ
VLILGMTVVSLAVLMWLVNYTKLGRAMRATAENPRVAALMGVKPDLVISA
TFVIGAVLAAIAGVMWAANYGTVQHTMGFLPGLKAFTAAVFGGIGNLGGA
VLGGILLGLIESLGAGYIGTVTGGVLGSHYSDIFAFIVLIFVLTLRPSGL
LGERVADRA
>Rfer_2804 LAO/AO transport system ATPase
MTTMPMQTHQPQRNWALTSVSADAVVQATGAQQRRAIAKSITLLESTRAD
HRVQADELLTALLPHTGKSFRLGISGVPGVGKSTFIEVLGLYLIGQGHRV
AVLTIDPSSTVSGGSILGDKTRMEKLSVHEHAYIRPSPSSGTLGGVAEKT
REAMLVCEAASYDVVIVETVGVGQSETAVANMTDMFVLMQLPNAGDDLQA
IKKGVMELADLVVINKADIDPHAATRAQAQITSSLRLLGLHGNPEHAHHN
EAIWHPKVIQISALKGQGVETFWASVQHFKALQTQSGNFAARRQQQSLAW
MWERIDAGLKQAFRQHPQVQALLPQLTQAVLEGRMAASTAARNLLSAQIN
RA
>Rfer_0352 extracellular solute-binding protein, family 1
MMKKYLWSFALSALVLAACGKKEEPPAPVAVPATVVSAPAPVAQNSEEKV
LNIYNWPDYIPEGMMAAFEKESGIKVNYDTFETNEALHAKLVAGNTGYDI
VVPGSVFAKPQIEGGMFQPLDKAKIKNLGNLDSNIMATLAKNTDPGNKYL
VPWAWGFTTVGINKTKVAKALGKTPMPENAWDLVFKPEYTSKLKSCGIAY
LDSPTEIIPAALHYIGKDAYSNDPADYKLANEMLAKVRKDVRIFSSTMID
DIAGGKACVAIGWSGDINIAANRAKENKSKDVIESLLPSTGALIFFDTMA
ITKDAKHPNNALAFIDFYLRPENAARMANEMNYPTANKAAMDKIKPEIAG
NKTIFVESDYFAKMIAPSSFTNEAREAMATVYNSFKKGK
>Rfer_0346 agmatinase, putative
MGLGQFSYANNSNRFLAVPELAAQPFAVVGVPFDGAVTHRPGARFGPQEI
RRASLMLCDGSHPFFGVSPIGHLGDALDMRLPNASPLADVRQQIQAQAAA
LMAGHHCVFLGGDHSVTLPLLRAARAQHGELALVHFDAHCDTWTDHFGEP
SGHGTWAYEAMAEGLVSPRHTVQIGLRSSGERAAREYVQDQGGLIFTARQ
LRGLDGAGLQPVIAQIRTRLGQRPCYLTLDIDCLDPAFAPGTGTPEPGGL
SSSQVLTLLEELAPLNMIGMDCVEVAPAYDHAELTSSAAATLVWTYLCGQ
VAKVLL
>Rfer_0869 conserved hypothetical protein
MMRFLPINLNALLVELDNLEQTLALLASLKNEPIAGVEELVPAARTILIS
WRPTACSRADLVREISQRDVSARAQRGGTLIEIPVHYNGEDLADVAQLLG
ITPEEVIRRHTGSEYTVAFTGFAPGFAYLSGGHPSFNVPRRSTPRTRIPA
GAVGLAGTFSGVYPQASPGGWQIIGVTPTAMWDLARDVPALLQPGYRVRF
VNIATISIAEEAVFTGARGQKQLDTLPPQGPTPDLGSAALEIQSPGLQTL
FQDLGRSGQAGQGVSASGAMDQAALKAANRLVGNASNSACLETASGGLRL
RSRGDTVVAVTGADAPLTVTSANGTHWQAERYQPVALADGDTLAIGQPQA
GIRTYLAVRGGFAVPPVLGSCSTDTLAHVGPPPLAVGDVLPIRPVHHGAV
VGLREEPPADLPTTQEVVTLDVVLGPRTDWFTAESIERLRSQLWQVTPQS
NRVGLRLAGEVALERAVPDELPSEGTAWGAIQVPPSGQPVLFLADHPLTG
GYPVIGCVATYHLNRAGQIPVNAWVRFNPIRDFEPSTAVARDTASPTEH
>Rfer_3500 inner-membrane translocator
MRFIFKTDYGQDIRLAKHGGHLFWYGALMLVLLLAPWLVQEYWLAQLTFV
LIYAVAGLGLMLLAGFTGLFSLGHAAFLGVGAYTQAVLTNMGLPFPLALA
CAAGLSAAVGLVVGLPALRVKGIYLGIATLSFGFIVEEVLARWESVTGGN
SGIHIKKPDMFGWTLDSGEAFYFLCLLITVLATLGILNLLRSPTGRAFVA
IRDSEISAQSMGIHLAYYKTLSFALSAALAGIAGALYAHQLQFISPDQFN
ILQSIDLLLMIVIGGVGSVHGAFLGAIFLITMPQAIAMVKDYLPPTIGQA
PGLQGLVYGVVLVAFVLFEPLGLYGRWLKVRTYLQMFPFYRKGMFKRQKS
FQKSDRLK
>Rfer_1789 Phosphoribosylanthranilate isomerase
MSQTPLPKNQLAQRTRIKICGLTREQDVDAAVAAGADAVGFVLYAQSPRC
VSPVRAAELARRLPPFVTPVLLFVNESATKIAAAYASIAGATAQFHGDET
PEQCWLASQSGARPYLRAARIPLGDAAGSFDLVKFALDYSQAQAILLDAH
VEGYGGGGQTFNWSLLPPNVNAHLVLSGGLNAANVIEGILQVRPRCRSLA
VDVSSGVEVSGPGNKGIKDPEKINQFVAAVRAADQQLAEMSKHV
>Rfer_1525 extracellular solute-binding protein, family 3
MKKLLLAIAIGSLCAVSFAQGKDLKVAIDPTYEPFTFKTADGKPTGFDVD
IANALCEQVKRKCVFVEQVWDSMIPGLQAKKYDVIISSMSITADRLKVID
FTNKYYNTPSRIVVKKDVKFDGPASLKGKKLGVLKGSTQEKYAMGELKTV
GVEVVPYEAQDQVYLDIKSGRLDGTVADFVEVTGGFLSKPEGKDYNLVGP
ELYTEKYFGTGVGIGLRKGETALKNELNAAIKTIRANGTYKKINDKYFKF
DVYGK
>Rfer_0344 threonine dehydratase
MIQLNDIQTAATRLQGQLLRTPCVASRTLSDITGAQVFLKFENLQFTASF
KERGACNKLAQLSAEERQRGVIAMSAGNHAQGVAYHAQRLGLRAVIVMPR
FTPGVKVERTRGFGAEIVLHGDTLDEARAHALALAEQQQLIFVHPYDDAD
IVAGQGTVALEMLQDVPDLDALVVSVGGGGLIAGMATAAKAIKPDIEIIG
VQTVRFPAMFNAIKGTHHPQGSSSIAEGIAVGTPGQIPLAIIARLVNDLV
LVDEGDIEQAIVMLLEVEKTLVEGAGAAGLAALLKYPERFKGKKVGLVLS
GGNIDPLLLAAIIERGMVRAGRLARIRVSARDIPGTLAKITTTVAEAGAN
INEVHHQRAFTTLAAQNVEVELVIQTRGPQHIAEVLAQLHQAGLEAQLI
>Rfer_3222 extracellular solute-binding protein, family 1
MKVIHAFLATSALALGLGTTALAQEKTLRLLTWADYAPADVVAQFEKESG
YKVELTLSNNEEMISKLRATGGAGFDLAQPSQDRITGPQQEFGIYKSMDL
SKLKAELFIPSMLEATKKNTTLGGKVYGLPHIWGTDGLVVNTSLTKMADY
PDLCRGDVKGKTAVRLKRPTLLAFAFASGKDPFALYSNPKAYGALMDDVG
KTMIACKGNLKFFWDNKDQLLNGMRTGEIVGAMMWDTGGWKLNGEKAEIQ
FIAPKSGALGWIDTFAIPAKGKNDAAAYAWINFNLRPEIAARVAKSAGNF
TASQGADQLMDAKLKAQFAASFPEAALKNVKWYPAVPAGIEEIEGRVLDR
IKAAN
>Rfer_1012 Extracellular ligand-binding receptor
MISSKLIGKTRGGLVSMLAAASLLTLAGAAQAQETFKLGVVTFLSGPAAE
SFGMPAANAAKLMVEQFNKAAAPAPYNKVGFGGMKIEMVLVDENGGGAKQ
VQELRNLYQRENVDAVIGYVGSGDCLAVAPVADELKKFLVLFDCGSPRIF
EDASPKYVFRTASHAAMDNVSLVRYLKSHNVKVNTMNLINQDYAWGQDSR
GDFLASMANVYPQAKMGADLLPKFGAGQYGTEVSVLGGKQADITYSSLWG
GDLQGFLLQGAARGLFKDTTLVLSAADHVLPGLLDKMPDGSIIGARGAYG
ILSAKSPINDWFQASYQSMHKVLPVQAGYRMTQAFMGVKLAVETAMAKNG
GKKPSPEQISDALRNSTFETPGGQIRMALGDGHQAIQGTAIGRTRYDAAS
KRVLAVDVQTFGAECVNPPANMKSMDWIKAGFPGAKCN
>Rfer_0350 Glutamate--ammonia ligase
MNDKKTMNFNDLEQWLNERRVTEVECLVPDLTGVARGKILPRAKFTEDRG
MRLPQAIVAMGVTGEFPESGPYYDVIDPTDKDMQLRPDPTTVRIVPWATD
PTAQVIHDCFDHQGNLVPYAPRTVLRRVCDLFAAQGLQPIVAPELEFYLT
ARNTDPNTLLRAPVGRSGRSETSRQAYSIDAVNEFDPLFEEIYDFCDKME
LNVDTLIHEVGAGQMEINFFHAEPLGLADEVFFFKRTVRESALRHDMYAT
FMAKPIAGEPGSAMHVHQSLLDVATGKNVFSNEDGTPSETFMHYIGGLQR
YIPAAMVLVAPYVNSYRRLSRNSAAPINIEWGYDNRTVGIRSPISSPQAR
RVENRVIGADANPYVAMAMTLACGYLGIKNKIKPKPEMKGDAYLAPYSLP
RSLGEALDWLRRESDLHEVLGKEFITVYSEIKELEFDEFMKVISPWEREH
LLLHV
>Rfer_0595 binding-protein-dependent transport systems inner membrane component
MAQSMTLDPGKLVGQLRRAERRKRAFAISLTLPLLLFLLFTFLVPIGALL
VRAVENPEVANTLGHTAKALSSWSRTAAPPAVAYAALIEDLSAIKEQSDA
GALARRLNSEVSGARSLIMSTYRALPLAPGMTPEQVRTQLLALDARWGEL
SYWQAIAKNASRWTPDYLLTSLDLKRDVQGHITQVDADSAAFANILVRTF
KISAIVTLFCLLLGYPLAYWLSILSTRKANMLMILVLVPFWTSILVRVAA
WIVLLQSNGLVNRSLMGLGLTDAPLPLLFNRLGVIIAMVHILLPFMILPL
YSVMKSVPPTYLRAAVSLGSHPLAAFFRVYVPQTWPGVGAGGLLVFILSI
GYYVTPALLGGAGDQMLSYYIAQYTNVNVNWGMACALGAVLLTATLVLYA
LYRRVVKSELSLG
>Rfer_1698 major facilitator superfamily MFS_1
MSLWIFSPFAQKEASLIKRRTAGDRPFSVWLVLLAAGGTFALTMGVRQTM
GLFLSALNTSTALGIGSISLAFAFGQLWWGLTQPFAGAVADRIGTGRVIF
LGVLLVAIGTFITPLMTSTLGLIFAIGLLAAGGAGMAGPSVLMAASTRLV
PPEKRGLATGIVNAGGSFGQFAMAPIAIGLTAAVGWASAMQWLGIMLALA
LPAVFVLKGNSKALAAQAAAASGTQALNARQAIGQALTNPNYRYLSLGFL
VCGFHVAFLATHLPGVVAACGLPPEIGGWALAMIGLFNIVGSLAMGWAVG
RWRMKSLLALLYATRGVAVLVFLLSPKTPAVMLIFAAVMGVTFLSTVPPT
VGLVAKMFGTSNLAMLFGIVMLAHQIGGFFGAFLGGYVFQATGSYDWVWY
IDILLAAGAALVNLPIRERHLRRVAAH
>Rfer_2971 ABC transporter related
MTSPMIRAVDVHKRFGPVEVLKGVSLDVDKGEVLAVIGPSGSGKSTFLRC
LIHLETIHRGSIEIEGESLVATDAQGHCKYVPEADIRRVCRKMGMVFQHF
NLFPHLTVLQNLIEAPLTVKTARLDDIVPKAEALLRKVGLFDKRNSYPSR
LSGGQKQRVAIARALAMEPDIMLFDEPTSALDPELTGEVLNTMRALAEEH
MTMIVVTHEMAFAREVAGRVVFMDGGTIVEARPARELFAAPRHPRTRAFL
EKML
>Rfer_0461 aminotransferase, class IV
MPAPDLSKGVAFVRGQYVPIGEASIPITDWGFLRSDATYDVVTVWDGSFF
RLDAHLERFMRSCQRWRLDPGLTPGQITGVLSQCVRLSGLRASYVEMICT
RGQPPWGSRDPRLAVNQFYAFAVPYVWLANAQQREAGLHLMISDVQRIPA
TSVDPSAKNYHWNDLTMGLLGALDAGADSVVLVDSVGNVVEGPGFNVFCV
SHGALVTPSEGMLEGVSRRTVIEMARALGLETQLRALPADELRGAEEVFI
STSGGGVLPVSRVDKRPVGDGRPGPITQRLVQTYWAWHADPVYSQPIDYS
L
>Rfer_4158 ABC transporter related
MKMQKPIVHIRGLRKSFGDHVVLHGIDFDVQPSQVVVIIGPSGSGKSTFL
RCCNGLEQPDSGRVEICGHTLSDGGQMLADQALNHLREQVGMVFQSFNLF
PHLSVIDNITVGPRKVRGVSGPQAEAEAMVLLDKVGLVQKAHAMPASLSG
GQKQRVAIARALAMQPQVMLFDEPTSALDPELVGEVLQVMKLLASEGMTM
MVVTHEMDFAREVADVVVVMDGGALIEAGPPDIIFTNPKQARTRDFLRAI
LTRV
>Rfer_0654 5,10-methylenetetrahydrofolate reductase
MTATPQIPLSFEFFPPKTPEGVEKLRLVRQQLYALKPEFCSVTFGAGGST
QEGTFSTVRDILTEGIGAASHISCIGATHAKVREQLAILKAMGVKRLVAL
RGDLPSGFGVGGEFHYASDLVAFVRAETGDYFHIEVAAYPEVHPQARSPE
ADLQAFATKVKAGANSAITQYFYNADAYFRFVEEADALGLSLPIVPGIMP
IASSTQLMRFSDACGAEIPRWIRLRLQGFGDDAVSIKAFGLDVVTDLCEQ
LRAGGAPGLHFYSMNQSAATLEVCNRLGQGPAD
>Rfer_1408 histidinol-phosphate aminotransferase
MLFKLKQNSCPETSFYSPVVSRLVPYVPGEQPKIDKLVKLNTNENPYPPS
PRVIAAIQLAAQQGLQLYPDPESTALRQAIAAHHGLAAHQVFLGNGSDEV
LAHAFCAFFQHGCPLLMPDISYSFYKVYCGLFNIPVEMVPLTEAMCLDVS
AYARTDGTSVAGVVIANPNAPTGVGLPLQQVERLLRLHPQRVVLVDEAYV
DFGGDSAIPLIAQYPNLLVVHTLSKSRSLAGLRVGFACGQAHLIDALERV
KNSFNSYPLDRLAIAGGVAAFEDQAWFEQTRRAVMSSREGLVLALEDLGF
KVLPSQANFVFARHPHHDAAAIAGALRARGVLVRHFKLPRIEQYLRISIG
TPAHCDALVQALGSVLAALA
>Rfer_3607 anthranilate synthase component I
MISELEFKSLSAQGYNRIPLMAEAFADLETPLSLYLKLAYSKDSGKYSFL
LESVVGGERFGRYSFIGLPARTLLRSMGFGPEVCTEVVTDGVVVETSRAN
PLDFISDYQKRFKVALRPGLPRFCGGLAGYFGYDAVRYIEKKLEKSCPPD
TLGCPDILLLQCEELAVIDNLSGKLYLIVYADPARPEAYANAKKRLRELK
EQLKYSVSAPVVKPTQSHSAERDFAKADYLAAVERAKELIAGGDFMQVQV
GQRIKKRYTESPLSLYRALRALNPSPYMYYYHFGDFHVVGASPEILVRQE
QVTVDGKTEQKVTIRPLAGTRPRGASLELDKAAEVELINDPKERAEHVML
IDLARNDIGRIAKIGSVKVTEAFSVERYSHVMHIVSNVEGTLNDGMTSMD
VLKATFPAGTLTGAPKVHAMELIDQLEPTKRGVYGGACGYLSYAGDMDVA
IAIRTGIIKDQTLYVQAAAGIVADSVPELEWKETEAKARALLRAAELVEE
GLE
>Rfer_3175 Thermostable carboxypeptidase 1
MIHPLIQNLTATFTRLYRYSHLAAIAGWDQSAMMPPKGNEARAAALAELQ
VLMHQTLTSEALAGLFQAASGEALDDAEQASVREMRRQWQQAKLLPERWV
EAQSLAASRCEHAWRTQRQQNDWTGFLGNFRAVVALAREEAKRLVDAKGG
SCYDALMDKYEPGMRSNDMDRIFGDVKSWLPELIGKTLDKQSLETVIKPQ
GLFPVDQQRSLGIEIMSLLGFDFEAGRLDVSTHPFCGGVAEDVRITTRYS
EDDFMRSLMGTVHETGHARYEQNLPRERVHLPVGQARSMGIHESQSLSFE
MQLGRSPQFLALIAPLLQKHLGRQAAFEAGNLAALFTRVQPGLIRVDADE
LTYPAHVILRYEIERALIECEIEAEDIPALWDEKMMSYLGVDTRGNFQDG
CMQDIHWPGGSFGYFPSYALGSMYAAQFFATIRSGQPDLDAQVLAGNLSP
VFNWLEKHIWREASRWPTDELVKRATGETLNPAHFRRYLEQRYLAA
>Rfer_1569 chorismate mutase
MAKTLPELRTQIDALDLELLALLNQRASLAHEVGEIKRADGSAVFRPERE
TQVISSLQAANPGPLKNASLAVIWREIMSACRALEAAQRVAYLGPAGTFS
EQAALQFFGASIERVLCASIDEVFRATAAGSAEFGVVPIENSSEGVISRS
LDLLLNSPLHIIGETSFLVRHNLLRLKPTLADIEVVYAHPQALAQCQDWL
STHLPQAERRAAASNAEGARLAATNPAWAAIASERAASEFGLHVASHAIQ
DDAFNRTRFAVVCLPQTLAAPLATGNDCVSLIVSVPNRPGAVHDLLVPLK
KHGVSMTRFESRPARSGQWEYYFYIDLQGHPSQPHVAAALKELQSLCAFC
KVLGTYPVGE
>Rfer_2177 cysteine desulfurase IscS
MRIRKCKTGRSIIQPFQNSSNEPAMDTTPHFPIYMDYSATNPCDQRVVDA
MIPWLRQHFGNPASRSHAWGWEAEAAVEKARQQVADLVGADPREIVWTSG
ATESDNLALKGAAHFYQTKGKHIITVKTEHKAVLDTCRELERQGFAVTYL
DVQEDGLINLDAFKAAIRPDTILASVMFVNNEIGVIQDIAAIGALCREKG
IIFHVDAAQATGRVEFDLTQLPVDLMSLTAHKTYGPKGIGALFVRRKPRI
RIEAQMHGGGHERGMRSGTLPTHQIVGMGEAYRIAKEEMAGENIRIQALH
DRMLAGLKDVEQVFINGHLEKRVPHNLNMSFNYVEGESLMMGIKGLAVSS
GSACTSASLEPSYVLRALGRSDELAHSSLRMTIGRWTTEEEIDYAVETIK
VNVAKLRELSPLWDMYKEGIDISTIQWAAH
>Rfer_2345 2-isopropylmalate synthase
MADQLIIFDTTLRDGEQSPGASMNKDEKLRIARQLERLKVDVIEAGFAAS
SNGDFEAVQGIARAIKDSTICSLSRANDRDISRAAEALKGANRSRIHTFI
ATSALHMEKKLRMTPDQVFEQAKLAVRFARNLVADVEFSPEDAYRSDEDF
LCRVIEAAINEGATTINVPDTVGYAIPELYGTFIKTLRERVPNSDKAIWS
VHCHNDLGMAVANSLAGVKIGGARQVECTINGLGERAGNCSLEEVVMAVK
TRRDYFGLDVDIETQHILAASRMVSQITGFVVQPNKAIVGANAFAHAAGI
HQDGVLKARDTYEIMRAEDVGWSANKIVLSKVSGRNAFKQRLQDLGAQME
SESDVNAAFARFKELADRKSEIFDEDILALVGSESVAREKEQYSFVSLSQ
HSETGERPQASIVFTADGKEVKSSSDGDGPVDASLKAIEAQVKSGAEMVL
YSVNAISGSTESQGEVTVRLQHGGRVVNGVGADPDIIVASAKAYLSALSK
LHSKADRVAAQG
>Rfer_3105 binding-protein-dependent transport systems inner membrane component
MTQQPPSSADVPALPTASTAVQGAPVRTPWTEFWRKFRKQHVAVAALALV
LVLVLLAVFAPAIVPYDAENFFDYEKLNDGPSWQHWLGVDPMGRDILSRI
LVGARISLAAGFLSVAIGGAIGTALGLLAGYYEGWWDRIVMRISDVLFAF
PGILLALGVVAILGSSMVNVVIAVAVFSVPAFARLVRGNTLVLKQMTYIE
AVRSIGASDWTIIMRHILPGTISSIVVYFTMRLGTSIITAASLSFLGMGA
QPPTPEWGAMLNEARADMVNAPHVALFPSLAIFMTVLAFNLLGDGLRDAL
DPKIDRE
>Rfer_1953 binding-protein-dependent transport systems inner membrane component
MLRFLLTRFSLIIPTFIGMTLLAFFLIRLVPGDPIETLAGERGIDAVRHA
TLLKEYGLDRPVLVQYGIYIGRVLQGDLGKSIITHEPVLREFMTLFPATI
ELALCAIFFALLLGIPAGILAAVRRNTIFDHGVMGVSLTGYSMPIFWWGL
LLILLFSVQLDLTPVSGRIAVEYFIEPVTGLLLIDSWLAGDKGAFWSAFT
HLILPTIVLGTNPLAVIARMTRSAMLEVLGEDYIRTARAKGLSNLRVVGL
HALRNALIPVITVIGLQVGVLFTGAILTETIFSWPGVGKWLIEAIGRRDY
PVLQGGMLLLGMIVMTVNLLVDVTYGIINPRIRH
>Rfer_4064 inner-membrane translocator
MRIGTLKETYIADAALFDSRTQQTWLVLGAALLLLFPFMASDYWLYLACL
VSINVASATGLNILTGYTGLVSLGQAAFMGLGAYTVAILEIRVGSPFLLN
LLAGGFVAMAGGLVVGIPSLRVKGLYLAIATIAASFIAHFLFANTAFTGR
TAGLTLPPASLFGVVLDTSFRLYWIIVPVTLLMLLGAANLFRTRVGRAFI
AIRDRDISAEVLGIALLRYKLLSFGLSSFYAGVAGGLWAYFFRVVTPESF
PLSMSIFFLAAIIVGGMGSILGGILGAIFMTMVPELLKLAVGLLPGGSEL
TVFLSPVRTVVFGLLIIGFLVFEPHGLAEVWRRIRRFFHLWPFRN
>Rfer_1516 Drug resistance transporter EmrB/QacA subfamily
MSTATPFNPPPLQGSARLWGTIAVSLATFMNVLDSSIANVSLPAIAGDLG
VSANQGTWVITSFGVANAIALPLTGWLSQRFGQVRLFITSVLLFVLSSWL
CGLAPNMTMLIIFRVMQGFVAGPMIPLSQGLLLSSYPPALAGLAMGLWAI
TTLVAPVVGPLLGGWITDNINWSWIFYINIPFGLLSAFMVWSIYRKRESV
IRKLPIDSVGLGLLVIWVGALQIMLDKGKELDWFHSPEVVGLGLVALVGC
AIFLAWELTAEHPVVDLHLFKRRNFWSGTLAIAVGYGLFFGNVVLLPLWL
QQFMGYPSIDAGMLLAPVGLLAIILSPIVGKNVNRVDPRWLASFAFVVFA
VVLLMRSQFNTQADFGTMMLPTIIQGIAMAFFFIPLSVILLSGITPDKIP
AASGLSSFVRIVAGSFGTSIATTVWQDRAAMHHAQLAESIHQGSATATQV
LAGMRNAGLTPEQALAQVNRLIDQQAYMLAIDDVFFASAMIFLLLIPVVW
FARPKLAGSAGGAGGSGSNVDAAVGAH
>Rfer_0884 FAD dependent oxidoreductase
MTVKPIQTDVAIMGGGIVGSSAALALRRMGMQVVLLERDLCGSRSSGVNY
GGVRRQGRPLSQLPLAQRAHRIWAELPRLIGTDGEYQRSGHFKIARSDAD
LAALEQYRTQSQDFDLGLEILSGSRLHTHCPWLGGKAVGGSLCAEDGQAN
PRLVSPAFALAAQRAGAQIFERSPVDEVTHDGQLFTLRSGAALQVQAPML
INCAGAWAGDLAAQFGEAVPLCARHPAMAVTEPLPFFMVWSLGVEGGGIY
CRQVARGNLVLGGGSGVALDADRARSGRDAIAALSVQAVELLPALRHAHF
IRTWSGTEGYLPDRQPVLGLSQTTPGLIHGFGFSGAGFQIGPAVGEVLAE
LARDGRSSTPIEAFSIERFLPAHAGPA
>Rfer_0464 cysteine desulfurase
MNQLIYLDYNATTPVAPEVLEATLPFLRVHFGNPSSARPFGRISA
>Rfer_0472 nitrogen regulatory protein P-II
MKLVTAIIKPFKLDEVREALSAIGVQGITVTEVKGFGRQKGHTELYRGAE
YVVDFLPKVKIEAAVADELVERVIETIEGAARTGKIGDGKIFVYDVEQVV
RIRTGETGKEAL
>Rfer_3229 FAD dependent oxidoreductase
MKQVDVVIVGGAAVGSSAAYFLASQADFKGSVLVLEKDFSFEKCATTLSA
ASIRHQFSTPGNIEMSQFGTQFIQHIGEHLSVAGEAPDVGFHEEGYLFLA
SDAGRAILESNHRVQRNLNVDVTLLSPARLRERYPWMNTNDLSAGSLGLS
GEGWLDAYSLMHGFRRKAISLGVQYRQAQVLSVKRQGRRIQSVSLSDGST
VNCSVLINAAGTGARTLAQSAGITLPVESRKRCVFHFTSSAQTPRCPMVI
DPSGAYFRPEGKGYLCGISPAQEQDPECFDFEVQHTLFDEVLWPLLAARV
PGFEAVRVKNAWAGHYDMNTLDHNLILGAHPEVDNFLFANGFSGHGLQQS
PAVGRALSELVTYGDYRTLNLSAFGWQRILENRPLLEINVV
>Rfer_1912 Homoserine dehydrogenase
MNPIQVGLLGIGVVGSGTFNVLRRNQEEIKRRAGRGIEITMVADLDVARA
QSLVGPDVKVVNDARAVIANPDIDIVIELIGGYGIAKTLVLEAIAAGKHV
VTANKALLAVHGTEIFAAASKKGVMVAFEAAVAGGIPIIKALREGLTANR
IEWIAGIINGTTNFILSEMRDKGINFDVALKQAQALGYAEADPTFDIEGV
DAAHKVTIMSAIAFGIPVQFDKAYVEGITKLGAADIKYAEQLGYRIKLLG
ITKRRELDAAQHTSAGVELRVHPCLVPAKRLIANVEGAMNAVMVQADAVG
TTLYYGKGAGSEPTASAVIADLVDITRLHTADAAQRVPHLAFQPNAMSDL
PVLPMSEVVTSYYLRLRVADEAGVLAKVTGILASLSISIDAVLQREADEV
GGQGGVVQIAQTDVIILTHDCVEAKMNAAIGLMQALPTVLEPITRIRKEE
LA
>Rfer_2801 lactoylglutathione lyase
MSSGSFRPASDRPFKVLGVQQIAIGGSDKTRLQKLWIDMLGLELTGTFRS
ERENVDEDICAMGSGPFKVEVDLMQPVDPDKKPAVHSTPLNHVGLWIDDL
PLAVQWLTANGVRFAPGGIRKGAAGFDICFLHPKSNDEFPISGEGVLIEL
VQAPAEVVVAFGKLSAGAA
>Rfer_3691 aminotransferase, class V
MPGLLPHVDPDGLLEFSVVYTDRALNHMSQSFQRVMQDISGMLKEVYHAK
SAVLVPGSGTFGMEAVARQFAGGKKVLIVRNGWFSYRWTQILDMGQIAAE
STVLKARRVGADKQSPWVPAPIGEVVAAIREKKPDVVFAPHVETASGMML
PDDYLRAVADAVHAVGGLFVLDCIASGAMWVNMVDTGVDVLISAPQKGWS
SSPCCAMVMLSERARAAIESTTSSSFACDLKKWLQIMEAYENGGHAYHAT
LPTDALTHLRDTMKEAQAYGFAKVRAEQIDLGAKVRALFERRGIPSVAAD
GFKAPGVVVSYTSDPEIQSGRKFLGVGLQTAAGVPLQCDEPADFMTFRVG
LFGLEKWHNVDRTVGQLAAALDQIL
>Rfer_4191 major facilitator superfamily MFS_1
MLIQVSATGAILAPPAIAPALLNQLGVDSVGIGAYIATAYIAAALSSVYA
AAFIQRWGSIRTSQVALGFCAAGLLLIASLGPFLAALGAIALGIGYGPIT
PASSDILARTTPADRYALVFSLKQTGVPLGGAVAGLAAAPIAVHVGTSSS
LIFMAILCVLAATLGQSLRHQLDNTRAPSAPWPTRAGFMMPIHMVLSHPG
LRVLALCSLVFSAVQMCLSSYLVTYLNASLGWTLVAAGAGLAVAQSGGVV
GRILWGAVADMTGKTMATLRALAAAMAASSILMVMLQPSTSPALVLTLVC
VFGCTAIGWNGVYLAAVARQAPQGTAGTATAGCLFFTYIGVVVSAPLFGV
LSTALGNMGVGFALLAIPLGVMVFSTRTMKV
>Rfer_3215 conserved hypothetical protein
MRAQGGGLSQRFGTAFGDNRPILKKRTHTLPEVNFSDDGPVRHLHLGTEW
IQGSMYLDEPNALVHEYIQRMMAWLLFVEPDSVKDRQAVQLGLGAGSLTK
FCHKVLRMKTTAIELNPQVLVACRGWFKLPAENARLQVVLADAAQEMQNP
KWWGTVDALQVDLYDHEAAAPVLDSLPFYNQCRRMLTPQGCMTVNLFGRA
SSFARSVEKISAAFGKEAVWAFKPTREGNTVVLAQSTPSRPKREVLMARA
DIIEAQWGLPASKWVRVFKPMLT
>Rfer_0933 binding-protein-dependent transport systems inner membrane component
MTRYLLSRVMGMLVVMALVAVIVFVLTRAASGDPITVLLGDQATAEDIIR
VQKEYGLDKPLPVQFGYWLKELSHGNLGQSIFLQRPVTQALWERAEPTTL
LALMAVFIAAAIGVPCGIVSAVFRGKFIDQFLTGFAMLGASIPSFWFGLV
LMQIFAVSMGWFPVSGYGDPGASLIERIHYLVLPSVVLGVLNSALIIRFT
RASMLDVLGEDYVRTARAKGLSEKVVVLKHALRNAMVPIITVLGLTVALM
IGGAVVTETVFGLPGVGNLVVSAVLRRDYPVIQGALLVIAMIYVVINFLT
DLLYMVVDPRVKY
>Rfer_1220 Drug resistance transporter Bcr/CflA subfamily
MNPDAQQLWRAPRWALAVLLAVLGMLGPFSIDTYIPAFSGIAQSLGATPV
QMQQTLSAYLFGFAFMSLFHGAISDSVGRRPVVLWGLAAFTLASMGCALS
QSIGQLVFFRAVQGLTTGAGIVVSRAVVRDMFAPAQAQKVMSQITIYFGV
APAIAPIIGGTLFVHLGWHSVFWFLTAVGVLLWVANYKLLPETLHLTQRQ
PLKVSNLLQGYWQLGLDPRFLLLALASGVPFNGMFLYVLSAPAFLGGILG
LAPTQFFWFFVLTISGIMGGAWVSGRMAGKLAPKQQIKYGLLIMLLIASL
NLVANWLFKAHVAWSLFPIAIFAFGWAMMVPVITLLVLDLHPERRGMASS
LQAFIASSANGLVAGLIAPLVMHSAVSLAVASLSMMCVGLFAWLYLHRRW
PDIGRVVEHPAH
>Rfer_1078 inner-membrane translocator
MEIFGIPLQAFLGQLMLGLVNGAFYAMLSLGLAVIFGLLGIVNFAHGALY
MLGAFAAWIMLDKFGINYWYALVLAPLTVGALGVVIERLFLKHLYKIDPI
YGLLLTLGLALIAEGIFRELYGVSGQNYNVPELLSGATNLGFMVLPNYRA
WVVLVSLAVCVGTWYLIERTRLGAYLRAGTENAALVQAFGINVPLMVMLT
YGAGAALAALAGVLAAPIIQVNPLMGSNLIIVVFAVVVIGGMGSIMGSIL
TGLSLGVIEGLTRVFYPEASSIVVFIIMVIVLMIRPAGLFGKEA
>Rfer_2184 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate
MEKPFAITLDVGTSLANHTGSWRTERPVYLNRIPPCNSQCPAGENIQAWL
FHAESGDYEKAWRELVEQNPFPAIMGRVCYHTCEAACNRAQLDAPVGINS
VERFLGDEAIALGWKFERPSVASGKKVLVVGAGPSGLSAAYQLARLGHQV
TVFEAGPMPGGMMRFGIPQYRLPRQVLDAEVQRIVDLGVNIEYNTKVSNV
LEAKEQGGFEAVFLAVGAHIAKRAYIPAGDSAKVLDAVSVLRSMEGEDKP
MLGRRVIVYGGGNTAIDVARTAKRLGATESIIVYRRNREKMPASDLEVED
ALQEGVMIKWLSTIKQAGESSITVEKMALDDKGFPQPTGEFETLEADSLV
LALGQDVDLSLIEGVPGLVVKDGVVVVDAQMMTGHAGIFAGGDMIPAERN
VTVAIGHGKKAARNIDAWLRAEVYAAAPKSELASFDKLNTWYYSDAPKTV
RPMLDMIRRQSTFEEVQGGLDESNALFEARRCLSCGNCFECDNCYGVCPD
NAVIKHGPGKGFDFNYDYCKGCGICVSECPCGAIKMVPEDI
>Rfer_2945 ATP phosphoribosyltransferase
MITLALSKGRIFEETLPLLRAAGIEVLEDPEKSRKLILTTNQPNVRVLVV
RASDVPTYVQYGGADLGITGKDTLLEHGSDGLYQPLDLQIAKCRISVAVR
ADFDYASAVKQGSRLRVATKYVAISREFFAAKGVHVDLIKLYGSMELAPL
VGLSDAIVDLVSTGNTLKANHLVEVEHIMDISSRLVVNQAALKLKQAPIR
KIIDAFASAISQ
>Rfer_3460 cysteine synthases
MKADNILQTIGNTPHVRINRLFGNSHNVWIKSERSNPGGSIKDRIALAMV
ESAEKSGELKPGATIIEPTSGNTGVGLALVAAVKGYPLILVMPDSMSIER
RRLMLAYGASFDLTPREKGMKGAIARAQELVAATPGSWMPQQFENPANID
AHVRTTAQEILADFPDGIDVLITGVGTGGHLTGVAQVLKAKWPNLKVYAV
EPVASPVISGGAPGPHPIQGIGAGFIPKNLHTDLLDGVIQVDAEPAREYA
RRSAREEGLLVGISSGATLAAIAQKLPGLPAGATVLGFNYDTGERYLSVE
GFLPA
>Rfer_0592 4-aminobutyrate aminotransferase
MQRESNLKNASLMARRRAAVPRGVGQSHEVFIARGENAEIWDVEGKRYID
FAGGIAVLNTGHCNPTVIAAVKAQLDLYTHTCFQVLAYEPYVELAERINA
LAPGDFAKKTMFLSTGAEAVENAIKIARAYTKRTAIIAFTSGYHGRTLLT
LGLTGKVAPYKTGFGPFPAEIFHAQFPNALHGVSVDESIASIESIFKNDV
EASRVAAIIVEPVQGEGGFNVAPPEFLQRLRALCDQHGILLIADEIQTGA
GRTGTWFAVEQSDVAPDMITLAKSMAGGFPISAVVGRADVMDAPAPGGLG
GTYAGSPLSCAAALAVLEVFKQENLLDRSRQLGLRLTTSLKKMAASHRCI
ADVRGLGAMVAIELCKGGDIHQPDADMAKRLAAEATQRGLILLTCGTYGN
VVRILVPLTASDAIVDEGLAIIDACLTAIQAV
>Rfer_2949 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
MNSVVTSVSGKTVAVVDYGMGNLRSVSQAVQAAAAGTGFQVIITAHPDEV
RAAERVVLPGQGAMPDCMRELRESGLQASVLEAAAHKPLFGVCVGMQMLL
DHSAEGDTPGLGLIHGEVLKFELADRLQPDGSRYKVPQMGWNQVWRNNHG
GPPHPVWGDVPDGSYFYFVHSYYAQPSDARHSVGETDYGQRFSSAIARDN
IFATQFHPEKSAEHGLALYRNFLHWNP
>Rfer_3779 periplasmic sensor signal transduction histidine kinase
MLSPVVVGGASFAYLLLLFAVAYLGDWRAAQGRSIIANPWTYALSMAVYC
TAWTYFGSVGRAASGGVWFLPIYLGPTLGMVLGWVVLRKMIRIAHAYRLT
SIADFIGSRYGKSPLLAGLVTLIAVVGIVPYIALQLKAVSAGYALLTTPQ
GADFAAQPHWGQDSTFYMALALAGFTMVFGARHLDSTERHEGMVAAIAFE
SVVKLVAFLAVGLFVVYGLFDGLTDLFARVQAVPALAGLLRLEQGGSFAW
TQWFALTLLSMLSLMFLPRQFQVMVVENVRESHLRRAVWVFPLYMLAINL
FVLPIALGGLLYFGPGQMNAETFVLSLPLAAGQNALALFAFIGGLSAATG
MVIVETIAVSTMVCNELVMPLLLRTRHFRRDAGRDLTRILLGIRRLAILG
VLVLGYVYFHLAGEAYALVSIGLISFAAVAQFAPSVLGGMYWKGGTRRGA
VAGLLAGFLMWAYTLMLPSIAKSGWLGDEFLYKGLGGLALLLPERLMGMQ
GLDNLTHSLFWSLLVNVAAYVGLSLWRAPSGPEASQALLFVDVFRRTASS
SPVFWRGQARVPDLLRLCERFMGVQKARALFRSYAGPVEARQMDTIRADA
RLVQFVETQLAGAVGSASARVLVASVVEEEPLTPEDVLRILDEASQLRAH
SRELEEKSDSLERATAELRQANEQLKSLDRLKDDFMSSVTHELRTPLTSI
RALAELLRDDPRIALAQRRQFIEIIVSETERLSRLVNQVLDMAKIESGHA
EWHTAEVDMRALVSQAVSTTAELFRERQIAVEVALPEQVPTLMADPDRLM
QVMLNLLSNAAKFVPLPGGRVRVSLSSDDSGVTVAVSDNGPGVAAEQQAL
IFDRFRQGGDAANRPQGTGLGLPISRQIVEHFGGRLWLESGLQQGARFLF
HLPRNNTSCAPDASATGDTA
>Rfer_2294 Cys/Met metabolism pyridoxal-phosphate-dependent enzymes
MADLTTTLIHHPYVPPAGFAAPQPGVFKASTVIFPNVAAMRNFEWKDKTA
YTYGLHGTPTTYMLEERLCTLEGGLQCLLLPSGLAAIANVALSLLRTGDE
VLLPDNAYGPNKVLAEGELKAWGITHQTYDPMNPQDLAAKIGPRTRLVWL
EAAGSVTLEFPDLRELVRVCQARGVLTALDNTWGAGLAFAPFDLTPGASP
ALGVDISVHALTKYPSGGGDVLMGSVITRDASLHMKLKLTHMRLGLGVGA
NDAEAVLRALPSMALRYRAHDETARILARWCEARAEFVQVLHPALIDSPG
HGHWLTLCQTESGGAAGLFSVIFDEKFNQDQIDAFCNALKLFRLGYSWGG
PMSLVMPYELASMRSTWPVYLRQGTLVRFSVGLEAVADLQADLQQALQAS
LA
>Rfer_0354 binding-protein-dependent transport systems inner membrane component
MAKLNLTLPGRRFVIGVPAVWLVLFFMLPFLILLYISFVDMGNDISPFKP
IWDSETGLLKLKYENYYSIFQSSDGSGLFQTIYIEAYVRSIWYALCTAVL
CLVIGYPFSYFIARSAPNLRPALLMMVMLPFWTSFLLRVYAWKGILADQG
VLNQMLLALGLITEPMQMLYTDVSMLVGMTYVYLPFMVLPLYANLVKMDI
RLLEAAYDLGASPFKAFWLVTVPLSKAGIIAGFMLVFIPCVGEFVIPSLL
GGPENIMIGRVVWDEMFTSNNWPRASALAVVMIGLIVVPLAVYYHFTGDA
AEVRR
>Rfer_3540 inner-membrane translocator
MAFFLETLLGGLMAGMLYSLVALGFVLIYKASGVFNFAQGAMVLFAALAM
ARFSEWIPGWTGIDNRIAVNLAAFLLAGMVMFVVAWLIERLALRHLVNQE
GTTLLMATLGIGYFLDGIGQTLFGSNIYEINIGMPKDPMLAFESVFEGGI
LINKEDLYAALIAAVLVAMLSLFFQKTSTGRALRAVADDHQAAQSIGIPL
NRIWFIVWCVAGVVALVAGVIWGSKLGVQFSLTTVALRALPVVILGGLTS
VPGAIIGGLIIGVGEKMSEVFVGPYVGGGIEIWFAYVLALVFLLFRPQGL
FGEKIIDRV
>Rfer_1509 NAD-glutamate dehydrogenase
MTHPALTELLTYTQEHAGPDANRLADFVLAYFENADPDEIQARGPATLFA
IANAHWRLADGPCAPQSARIRVFNPTLAEDGFVSEHTAIQIVHDDMPFLV
DSVTMAVNRSGRTAHWIVHPLLSVQRDKQGHLVKTASAAHLGEQTSPMAS
FILVECDRIVSEVDRAALAGELARILGDVRATVYDWQPMLNRLRAVADAS
AQSSISSVNQQEGVEFLRWLEAKHFTFLGARDYNVVRDDDGVSLVAIPES
GLGVLRGVAHTPTSRLPADAVAFLDSDQLVLITKAMTRSTVHRPAWLDYI
GVKRFDDAGQVVGETRFLGLYTSTAYSAPVSAIPQVRLRAAEVTAAAGVV
PDSHAAKSLQSILDAYPRDELFQIDTATLIEHAIGILRLQERQRTRVFLR
SDPFGRFTSVQVFVPRDRYNTELRIKIGQELASALDGRSIEFTPMLTDSP
MARIHYLVRAKEQVPKNLDLRALEARIARLAQRWEDDCTQELLYTHGEGP
GLTLAHRFANAFPTAYREDFSAQVAAEDAQALSVLTPSSPLAVKLYRPLD
AGAGLLRFKIYNTSKVALSDSLPVLERMGARVLDEQPYHVGSGNADKGKN
EAFWIHDLGLQLPVGTELSVIKSRFEALFVQAWKGEVESDDLNKLVLNTS
LDSRAIAVLRAYTRYFKQLGFAFSQSYIETTLYKNALIAQEISALFEARF
NPAQEADRSSVQEQIGQRIEALLSAVASLDEDRILRQFYASVMATLRTNA
WQTTDLGVGKSYLSFKLNPREVPGVPEPKPLFEIWVYSPRVEALHLRLGK
VARGGLRWSDRPEDFRTEILGLVKAQHVKNTVIVPVGSKGGFVLKKAPPA
GEREAYMAEGIACYKLLLSGMLDLTDNLVQGQVVPPPKVVRHDPDDPYLV
VAADKGTASFSDIANSVSAQYGYWLGDAFASGGSVGYDHKKMGITARGAW
ESVKRHFRALSINTQTTPFTVVGIGDMSGDVFGNGMLLSEHIQLVVAFDH
RHIFIDPTPDVALTFAERQRLFALPRSSWDDFDKTLISEGGGVYSRAAKS
IKLSAQARAVIGIEAQELTPAALLHAVLQAPVDLIYNGGIGTYVKAAYES
HAQVGDKAGDAFRVNGSELRCKVLVEGGNLGCTQHGRVEFAQRGGLIYTD
AIDNSAGVDCSDHEVNIKILLDRVVEAGDLTLKQRNDLLASMTDEVGHLV
LADNYYQTQALDIACHRPLYVLDGQQRLMQWLEGAGRLNRAIEFLPSEEE
IALRRSRKQGLTAPEGAVLLAYAKMSVFDDLVASNLPDDPYFSGALRAYF
PKVLSEKFAEAIARHPLKREIISTFIANTVVNRTGATFVNFLAAEAAATA
ADVVRAYTLAREIFDLETLWDQIDALDYQVSTSLQLDLLSKLTAIAQRAS
RWMLRLRAKDTDLPTLIQRYQPGARELRGNLEHWLPAQAIANWQQATQTL
VQAGVAQALAQNLTALEFIFPALDLVDLAQGTNADLEQAARAYFGVERAL
GLSAWRAQINRLPTDSLWQTQARGSARDDVYSIASQVTRSLLSGTQSLSD
WEAQHQIAIDRLCKLLQNIGTQGPDLAPISVALRELRHLA
>Rfer_3499 inner-membrane translocator
MQLLQLVISGIAQGCIYGLIALGFVLIYKATETVSFAQGELMMLGAFGGL
AGMTLLGFPYWLSVLGAIAAMALFGMVLERVVIRPILGQPAFSIVMLTIG
IGYVARGLITMIPNIGTETHMLPVPYKDQIWHLAGLVLNVEQMVVIGVTG
VLCVLLYTLFRYSKLGIAMQAASQNQLAAYYMGIPVKRLNGIAWGLAAAV
AAIAGLLLAPITFVHANMGFIGLKAFPAAVVGGFGSLPGAIVGGLIIGIV
ESLSGFYLPDGFKDTAAYIVVLIMLVVKPNGLFGEKLSKKV
>Rfer_2587 inner-membrane translocator
MKLNKMIIAMLLAVYIAVPLAFGSDNYVMSLVVASMVIGGIALSWALLGN
LGGMVSFGHAAFFGVGAYASAILSMKFGVPVLISILLGGVGAVIASLAML
PVLRLRGPYFALAILAYAHIFRILATQWTSVTGGSGGLSNIPRLPEIFGY
DFSSKTGGYLVILTIVLAFAAVYQYIRGSHYGLALRAMHESEDATRVVGV
NSTLLKGLMLLVSAFMCGVVGAFNAHYINFLEPDYAFSGLWVTIPIVAAI
FGGYRTITGPIVGAVVVYLIDQLIFKNIIPSGHQLVLGVLLVAMIVFSPD
GLLPLLRKLTRRTHVAA
>Rfer_2327 ABC transporter related
MSESSTPQPIIIFDKVNKWYGNNFHVLRDIDLTVAKGERIVICGPSGSGK
STLIRCINRLEEHQQGRLVVDGIELADDVKAIDQVRKEVGMVFQQFNLFP
HLTVLENLTLSPMWVGKMPKKEAEEKAMHQLNRVRIAEQAEKYPLQLSGG
QQQRVAIARALCLKPKIMLFDEPTSALDPEMIKEVLDVMIAMADEGITML
CVTHEMGFAKAVADRVIFMDQGQIVEQNNPHDFFNNPQNERSKDFLSKIL
GH
>Rfer_2387 ABC transporter related
MLKIENLHAFYGKSHVLHGVHFDVSAGEIVSLLGRNGSGRSTTAKAIMGL
VDCEGSLLWRGQELLGKKTFEIAHLGLGYVPESRDIFPNLTVEQNLYLGQ
KSARKAGRWSLDDMYQMFPRLKERQSMLAGVMSGGEQQMLTLCRSLMGDP
DLIIIDEPTEGLAPKIVELVAHYLKELKKRGISVLLIEQKLTIAMDISDR
CLVMGHGSIVFSGTPDELRKDSYTRKEWLEV
>Rfer_2615 aminotransferase, class I and II
MKPLARIHGGPDAQGAPLYDFSSNSNACGPCPQALAVVQAADATRYPDAA
YADLRAALARFHGVAPWRVVLAGSASEFIFRITAWVKGQGTRQAPRTVCL
PRHGYGDYAHATQAWGLQSTAQPDAADLVWACEPSSPLGQAHTTWPAWLR
RAADGALHHSPAAPEPLCNTVVLDSAYAPLRLGGTPSLSDAQRGRVWQLF
SPNKALGLTGVRAAYAIAPFDAQPAAAQLDALVPSWVLGAHGVALLMAWT
QTDTQAWLHSSLQTLRGWKQRQVQGLQALGWTVQPSDTPFFCAQPPQGVD
AVALCAQLRTQGIKLRDATSFGLPGWVRLGVLPPQAQDALGAALQTTVNK
GQA
>Rfer_3605 glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase
MKLLMIDNYDSFTYNIVQYLGELGADVTVARNDEITLEEIEARLSAGALD
RLVISPGPCSPTEAGISVAAIQHFAGRLPILGVCLGHQAIGAAFGGKIIR
AQQLMHGKTSLITTTQEGVFAGLPAQFTVNRYHSLSIERATCPPCLKITA
WTDDGEIMGIKHTSLDIEGVQFHPESILTEHGHAMLKNFLKPRGTDRSDA
KRTSSVPN
>Rfer_3679 pyrroline-5-carboxylate reductase
MTQRIAFIGGGNMASAIIGGLIKQGLAPRQIDVVEPQAEARDKLACSYGL
QPHAEAGAFLAQADLVIWAVKPQTFKDAALAVAPHTANALHLSVAAGIPS
DSIARWLGTERVVRAMPNTPALIGKGISGLFARSAVSSADKDWISQIMAS
TGEFLWFDAEGQLDAVTALSGSGPAYVFYFMEAMTTAGCEMGLSREQAHQ
LTVATFVGASELARTSSEPPKVLRQRVTSKGGTTFAAISSMEDGDLQAEF
INAIYAARQRAQELGDELGGA
>Rfer_3745 protein of unknown function DUF6, transmembrane
MLVSYDLFALGAAACWALGSVTSVTPSRHLGAFAFTRWRMLMVALMLWAV
VLATGSWRTFSQGAWGIMAISGLIGIFVGDTALFAAMNRLGPRRAGVLFA
THAVFSALLGFWLLHERMSLQALAGGLLTLVGVMTAIVLGRHKEESHAWE
ADQGHVGAGVLLALLAALCQAVGSLIAKPVMSTDVDPVMASAVRVTVATC
AHFVLLGAGFRAARAQRPPTLRVLAQTGLNGFIAMGVGMTLILLALQKGD
VGMVAILSSVSPVLVLPLLWLHLGRAPAPGAWVGAIMTVAGTALILLR
>Rfer_1001 ABC transporter related
MANAQSDPGSGSLLKVENIIVRFGGILALNSVSFDVRPGEICALIGPNGA
GKSTLFNCLSRLYECDSGSITFNGHKLRSLRRHRIAEIGIGRTFQNLALF
RSMTVRENVLMGCHSRHHAGFLRNAFRLPGAARIEAAARARADDLIDFLQ
LAEYAERVVADLPFGTQKRVELARALASDPQLLLLDEPACGLNHEELEGL
GVLIRDIRDRLKVTVLLVEHHMGLVMSISDRVVALNFGKKIAEGTPAEVR
MHPEVIRAYLGEAEEKAT
>Rfer_2478 thiamine pyrophosphate enzyme-like TPP binding protein
MPSTSIRHGGDRVAEALQAHGVRCVFTLCGGHISPILSASKARGIRILDV
RDEATAVFAADATARLSGLPGVAAVTAGPGISNTITALKNAQLAQSPVIL
IGGAAPTALQGRGALQDIDQRPLVAPHVKRFIKIQRVSELGPAVDEAFAV
AQAGVPGPVFIECPVDLLYDEVSIRQWYADAAGKGTSVADRLLRFYLNRH
VKKMFDGSAAVSAPQVRPVLPPRAPDGRLQAALAALAKAERPLLVIGSQA
LVLSKQAEHLAEAVARLGIPVYLSGMARGLLGRDHPLQMRHQRRQALREA
DCVLLAGVPCDFRLDYGKHVRRSATLIAANRSAKDARLNRKPDIAAIGDA
GLFLQALAQAQPASTAAGSRLAAWVAQLRGRDAARELEIDQQAQASGEFV
NPIALFRTLENELGDNALLVADGGDFVATASYVLHPRTPLSWLDPGAFGT
LGVGAGFALGAALARPGGEVWIILGDGACGYGLVEFDTFVRHGIPVIALV
GNDAGWTQIAREQVKMLHDDVATVLARTDYHAVAAGFGAEGIVVKTMMEL
PAALARARALAHSGKPVLVNVWLDKTEFREGSLSM
>Rfer_3728 protein of unknown function DUF6, transmembrane
MTTQPHAIRNGLLLGTLGVVIFALTLPMTRLAVGSAAAPQMSGVFVAAGR
ATVAAILAIVFLAVTRAPSPKRGDWLPLGVVALGVVFGFPLFSSIAMRHV
EAVHASVILGVLPLATASVGAWLHRQRPSAGFWACAGLGTALVVVFAVLR
SGQSGLTLKGADLLLLLAMACAAVGYGVGALLSQRLRADHVICWALVLGL
PLNLPIALAEYPQEAIKIEAWWAFFYVAVFSQWLGFFAWYRGLALGGTVR
VSQVQLLQPFLSMVFAVPILGERLDALTVGFGLAVVTVVFVGRTMPVRNT
LSTSKPTPPLGAKSS
>Rfer_1660 ribose-phosphate pyrophosphokinase
MQAPHTPDFMVFTGNANPAMAEDIASYLNISLGAATVGRFSDGEVTVEIN
QNVRARDVFVVQSTCAPTNDNLMELLIMVDALKRASAERISAVIPYFGYA
RQDRRPRSSRVPITAKVVANMLQTVGVARVLTMDLHADQIQGFFDIPVDN
IFASPVLLGDLRQKNYEDLIVVSPDVGGVVRARALAKQLNCDLAIIDKRR
PRANVSEVMHVIGEIDGRNCVIMDDMIDTAGTLVKAAEVLKERGAKKVYA
YCTHPIFSGPAIERITNGDALDEVVVTNTIPLSQTASACGKIRQLSVAPL
IAETIQRIAKGDSVMSLFSDQENLF
>Rfer_1076 ABC transporter related
MSKELLRIEDLHAWYGESHILHGVNLTVNEGEVVTLLGRNGAGRTTTMRA
IVGLTGSRKGAIKIQGVETIKMAPHKVAHLGVGYCPEERGIFASLTAEEN
LMLPPTLAPGGMSVDEIYAMFPNLQERASSPGTRLSGGEQQMLAVARILR
TGARLLLLDEISEGLAPVIVQKLAEMILTLKAKGYTIVLVEQNFRFAAPL
ADRFYVMEHGVIVKQFAQNELAQNMGMLQDYLGV
>Rfer_2948 Imidazoleglycerol-phosphate dehydratase
MSTPIALVPARTAEVTRNTAETRITVKVNLDGSGQSHLSTGIGFFDHMLD
QIARHGLIDLDIQATGDLHIDGHHTVEDVGITLGQAVHQAVGDKKGIRRY
GHAYVPLDEALSRVVIDFSGRPGLVMDVPFKSGMIGTFDAQLAHEFFQGF
VNHAFVTLHIDNLKGENAHHQAETVFKAFARALRAALEFDPRALGQIPST
KGTL
>Rfer_2510 HAD-superfamily subfamily IB, PSPase-like
MKLTLFDLDHTLLPIDSDYAWGVFTSTIGWTDPLEFNQRNDEFFAHYQAG
TLDIHEYVRFATAALRQQGPIHAQAAHVQFMKTVVDPVIKEQAVALVRQH
QQAGDEVLIVTATNDFVTRPIAQAFGVDQLIAVELERDTAPGGSGWITGE
IVGVPSFREGKITRVTQWLASRQLDWADVETTFYSDSMNDLSLLERVTHP
VATNPEAPLRALASERGWRILDLF
>Rfer_1835 ABC transporter related
MLKIENLQAGYGKVQVLHGITIHVPKGKIVTLIGSNGAGKTTTMRAVSGM
IKPTSGQIMLSGQDITGLDSHQIARRGLAHSPEGRRVFPTLSVVDNIRLG
AFVRYTNARPKGDVEGDVDKALEMFPRLKERTHQLAGTLSGGEQQMLAMA
RAVMLNPEVILLDEPSMGLAPILVEEVFNIISRLKAQGVTMLLVEQFAAA
ALKVADYGYVLENGRISVHGPAAKLKDDPAVKAAYLGG
>Rfer_3378 ABC transporter related
MTPDLLEEGARRARAHALKTGHGKTESGGRAAGFSRLATPGEVDVTHGRI
LYLEDVSVSFDGFKAINKLSLDIAPGELRCIIGPNGAGKTTMMDIITGKT
RPDEGRVYFGSTIDLLRYTEPEIAQLGIGRKFQKPTVFEQLTVFENLELA
LKTDKAVTASLFFRLDSTQSDRLLEVLHTIHLTGNASAQAGTLSHGQKQW
LEIGMLLMQDPKLLLLDEPVAGMTDIEAERTAELFLSLKGKHSLMVVEHD
MSFINTISDIVTVLCEGAVLAQGTLAQVQADERVIEVYLGR
>Rfer_0212 inner-membrane translocator
MKSSKFFFVAAAFVLLALWPLMAGQYGVDLVTKIMVFAIFALSLELLVGS
TGLVCFGQAAFFGIGAYATVLLTPQDGAPSLLWLLPACVLAAALYALLVG
ALSLRTKGVYFIMVTLAFAQMAYYVVHDTPLGGGTDGIYLMAKPVVLGTL
LDLDKPMAFYGFTLACLTAVFGFLTLLLRSRFGRALAGIRVNEQRMRATG
FSTYPYKLAAFVISGGMAGLAGFLFAVKDGFVNPELISWHLSGEVLIMII
LGGLGHLRGALIGAFAFALLQEFFKSEAIFGEFAKHWHLGLGLSIIACVA
LLPRGLVGVPEQVITRLRGRSGRVRDDSVVEVSHESV
>Rfer_1005 Extracellular ligand-binding receptor
MVKSLDAGRRHSLKLGVGLLMVATLPLAVHAQKKYDTGASDTEIKIGNLT
PYSGPASAYGACGKAMAAYFSKLNASGGINGRKVNFMTADDAYNPAISVE
QTRKLVEQEEVLLMFASLGTSHNMAVQRYLNAKKIPQLFVNTGATRFGDP
KNFPWTMGWQPTYQTEGQLYARHILATKPNAKIAVLMQNDDFGKDYMKGL
TDGLGEKGKHLIVLHLTHEVTDPTIDSQMVSFKASGADVFVIMTTPKFAA
QAIRKSAEIGWKPTQYLVSVSQSASAVLKPAGVENAVGVISSTYLLSPTD
PAAVGNKDVAEYLATMKQYYPAGDPEDTLNSIGYAAAATMTQVLRQAGDN
LTRENIMKQAASLHFTPPMLYPGIDVRTASDDFFPIEKKVLQRFNGKAYE
VISSTGG
>Rfer_2951 imidazoleglycerol phosphate synthase, cyclase subunit
MLAKRIIPCLDVTGGRVVKGVNFVELRDAGDPVEIAARYNDQGADELTFL
DITATSDGRDLILHIIEAVASQVFIPLTVGGGVRTVDDVRRLLNAGADKT
SFNSAAIANPQVIRDASRKYGAQCIVVAIDAKRRLATDVGRLDANGQAVG
EGWDVYSHGGRKNTGLDAVIWARLMAELGAGEILLTSMDRDGTKAGFDLA
LTRAVSDAVSVPVIASGGVGTLDHLADGIQIGGADAVLAASIFHYGEFTV
AQAKAHMAARGIPVRI
>Rfer_3649 methionine gamma-lyase
MSKTTAVKGFSTRAIHFGYNPADHQGALVPPIYTSATFAFPDAAYGARCF
TGEEAGYFYTRIANPTLALLEGRLASLEQGAGAVVFGSGMGAITATLWSM
LEPGDEVLADMTLYGCTYAFLTHGLSRFGVTVRHVDMTDAANVAQAMGEK
TRVVYFESPANPNMRLVDIEAVSRVAHQGGAQVVVDNTYCTPYLQQPLLL
GADVSVHSMTKYLGGHGDLTAGAAIFADAQLAQRVRLFGLKDMTGAVMSA
QDAHLVMRGLKTLTLRMDRHCQSAQKVAELLQRHPATKMVHFPGLPTFAQ
HALAKRQMRQFGGMIAFELQGGLAAGICFMDALQLVTRAVSLGDAESLAQ
HPASMTHSTYTPEERAAHGISDGLVRLSIGLEDIEDILADIAQALDQAHA
PGHSRPAVAAAERCRELA
>Rfer_2933 Glutamate synthase (ferredoxin)
MTRAAEIKHLQEHGLYSSTQEHDACGVGFVAHIKGVKSHDIVQNALKILE
NLDHRGAVGADKLMGDGAGILIQLPDALYREEMAAQGVTLPPFGEYGVGM
IFLPKEHASRLACEEELERAIKAEGQVLLGWRDVPVNRDMPMSPTVRLKE
PVLKQLFIGRGNDVIVQDALERKLYVIRKTASAAIQNLQLKHSKEYYVPS
MSTRTVIYKGLLLADQVSTYYLDLQDERCVSALGLVHQRFSTNTFPEWPL
AHPYRYVAHNGEINTVKGNYNWMKAREGVMSSPVLGADLQKLYPISFPDQ
SDTATFDNCLELLTMAGYPLAQAVMMMIPEPWEQHATMEARRKAFYEYHA
AMMEPWDGPASIVFTDGRQIGATLDRNGLRPSRYCITDDDLVIMASESGV
LPVPENKIVRKWRLQPGKMFLIDLEQGRMIDDDELKANLVNSKPYQQWIE
NLRIRLDDVEGGSEPASASEVAVSLLDRQQAFGFTQEDIKFLIAPMATAG
EEAIGSMGNDSPLAVLSDKNKPLYNYFKQLFAQVTNPPIDPIREAIVMSL
VSFVGPKPNLLDINQVNPPMRLEVSQPVLDFADMAKLRDIEKYTRGKFRS
HTLDITYPLAWGHEGVEAQLASLCAEAVDAIKGGNNILIISDRGISATQV
AIPALLALSAVHQHLVRAGLRTTAGLVVETGTAREVHHFGVLAGYGAEAV
HPYLAMETLADICKDLPGELSAEKAIYNYVKAVGKGLSKIMSKMGVSTYM
SYCGAQLFEAIGLSTDVVAKYFTGTPSRVEGITVFDIAEEVIRMHKAAFG
LDPVLASMLDAGGEYAWRTRGEDHMWTPDAIAKLQHSTRANSWHTYKEYA
QIVNDQSKRHMTLRGLFEFKIDPAKAIPVEQVESAAEIVKRFATGAMSLG
SISTEAHATLSVAMNRLGGKSNTGEGGEDPARYRNELKGIPIKLGDTLKS
VIGADVVEVDLPLQDGDSLRSRIKQVASGRFGVTAEYLTSADQIQIKMAQ
GAKPGEGGQLPGGKVSDYIGRLRHSIPGVPLISPPPHHDIYSIEDLAQLI
HDLKNVAPHASISVKLVSEIGVGTIAAGVAKCKADHVVIAGHDGGTGASP
WSSIKHAGSPWEIGLAETQQTLVLNRLRSRIRVQTDGQIKTGRDVAIGAL
LGADEFGFATAPLVVEGCIMMRKCHLNTCPVGVATQDPALRQKFSGKPEH
VVNYFFFVAEEVRHIMAQLGIARFDDLIGRSDLLDMRQGIEHWKASGLDF
GRLFAQPNAPAEVPRYQTETQDHGLAKSLDNILIAKSRAAIDKGEKVHFM
EMARNVNRSVGAMLSGAVTQVHPEGLPDNTIRIQLEGTGGQSFGAFLARG
ITLYLIGDANDYTGKGLSGGRVVVRPSIDFRGDAVKNTIVGNTVMYGATS
GEAYFSGVAGERFAVRLSGATTVVEGTGDHGCEYMTGGTVAVLGITGRNF
AAGMSGGIAYVYDEDGKFAKRCNTAMVSLTKVLTAEEQREAIEVSLWHRG
QSDEAQLKKLLEEHNRWTGSKRARELLDNWELARLKFVKVFPNEYKRALA
TIHAQKEALALTSRAQAATKKEVVPAK
>Rfer_2378 cysteine synthase B
MKYPTIEDSIGKTPLVRLQRIGAQENAARGNVILGKLEGNNPAGSVKDRP
ALSMIQRAQERGDIKPGDTLIEATSGNTGIALAMAAAIKGYRMVLIMPED
LSIERAQTMKAFGAELILTPKSGGIEYSRDLAEQMQRDGKGRVLDQFSNA
DNPRIHFETTGPEIWADTKGQITHFVSAMGTTGTITGVSQFLKKKNQAIK
IIGVQPNEGSRIPGIRKWPQAYLPKIYDPSHVDELVYVSQEDAEDMCRRL
AREEGIFAGISAAGACWVAQEIAKRESNATVVFIVCDRGDRYLSTGVFPA
>Rfer_3106 peptidase S58, DmpA
MMHRHLLPHIGNLPQGLRNAITDVAGVTVGHHTLAAQDVQTGVTVVRPHA
GDPFRDRVPAAAAVLNGFGKSVGLLQIEELGVLETPIALTNTFSVPAVAT
AQIRQCMAANPETGRSLPTVNPLVFECNDGFLNDIQRMAITEQHYLQACA
QAGVDVEEGSVGAGRGMSSFGLKGGIGTASRRARVMANTEYTVGALVLAN
YGRLPQLVLAGHALGPQLATRLATSQKSLAAEPEKGSIILLIATDAPLDA
RQLRRLALRAGAGLARTGSVFGHGSGDIALAFSTAYTVPQQSNRPMPTTA
MLHDGLIDALFQAVSDSTEQAIIHALWGACAVTGRDGHHRIALADLLHDW
PATSHPLTPSASSS
>Rfer_2952 Phosphoribosyl-AMP cyclohydrolase
MNWLDELKWDSQGLMPAIAQEQGSNDVLMLAWMNREALQKTAELGRAVYF
SRSRNKLWFKGEESGHVQIVHEIRIDCDQDVILLKVTQTGHTPGIACHTG
RHSCFYRVYENGEWKVTDPVLKDPQTIYK
>Rfer_2381 3-dehydroquinate dehydratase, type I
MQSSKPIESHGQPIAGGKLPLICVPLVGHTLDEVMAELAIVLPKKPDVLE
WRVDFFESIGDVAAVIAAAKAIKSKAGDIPLLFTRRSVMEGGEKIALNED
QVIALYGAVCESKAIDLIDYEMANETANIAQVRAAAKSNDIKLVLSFHNF
SSTPGLEALASKFLMADQLGADIAKVAVMPRDPNDVLILLAATQQASQKL
RIPLISMSMGPYGSLTRLFGWAFGSALTFAVGARSSAPGQVPIEDLNTVL
GILRKAMGDGQTTP
>Rfer_1951 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like
MALLEIENLSVDFPSTNSVMHAVEGVSLSLDTGDVLGIVGESGSGKSVTM
MALMGLVAYPGVVTADKLRFDGHDLLKLSTKERSQLIGKDVAMIFQDPTT
SLNPCFTVGFQLAETLKLHLGLDAKAAKRRSIELLEQVGIPAPESRLKIY
PHQMSGGMNQRVMIAMAISCNPKLLIADEPTTALDVTIQAQILDLLRSLQ
KERGMALVLITHNMGVVSEMAQRVAVMYAGQIMEEQSAQTLFATPHHPYT
EALMSAMPERSDGVSRLATIPGMVPGLYDRPSGCLFAPRCAYAVDSCRAQ
RPPLRPWQDGMVRCQFPLGGKA
>Rfer_0966 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
MDYVLNFSVVWRSFDHLLGGLGLSLLLALGSILIGMAIGLVVSFALISPV
AIARNLAGAYVTVTRNTPLLVLVLFTYFALPDLGVRLGDIESFVATLAIY
SGGYLAEVFRAGMLSVPKGLSEAGQAIGLTRMQIRFSIIMPIMFRNVLPA
LGSTVISLFKDTSLAAAIAVPELTYQARKINVESFRVVETWIIASLLYVC
TCAVLAMLFRRVERHLAIPR
>Rfer_4054 alanine dehydrogenase
MLVGLPKEIKNHEYRVGLTPASVRELTTHGHQVLVQRGAGADIGLSDAQY
EAAGATLAADVATVFAQADMIVKVKEPQPQECAMLRPGQILYTYLHLAPD
PEQAAALIKSGAVCIAYETITGPGGGLPLLAPMSEVAGRMAVQAGAAHLE
KSKGGLGILLGGVPGVPAAHVVIIGAGVVGTHALQMAVGMGARVTVLDKS
VDRLRQLDLVFGNRINTVYSSAHSVEEAVLDADLVIGGVLIPGAAAPKLV
TRSMISRMKKGAVVVDVAIDQGGCFETSHATTHTEPTFMVDGVVHYCVAN
MPGAVARTSTFALNNATIAHAVALADKGWKQALRDDPHLKNGLNVANGHV
TYEAVAKALGYTYVNADTLLA
>Rfer_0456 Dihydroxy-acid dehydratase
MSTPPKRVLRSAAWFGAADKNGFMYRSWMKNQGIPDHEFQGKPIIGICNT
WSELTPCNAHFRKIAEHVKRGISEAGGFPVEFPVFSNGESNLRPTAMLTR
NLASMDVEESIRGNPMDAVVLLVGCDKTTPALLMGAASCDIPTIVVTGGP
MLNGKHEGRDIGSGTVVWQLHEAVKAGKISLNEFMSAEAGMSRSAGTCNT
MGTASTMACMAEALGTSLPHNAAIPAVDARRYVLAHMSGMRIVDMVWEDL
KLSKILTREAFENAIRVNAAVGGSTNAAIHLKAIAARIGVPLELDDWTTV
GKGTPTLVDLQPSGRFLMEDFYYAGGLPAVLRRMGEGGLLPHKDALTVNG
KSIWENVLDAPIHNPEVIRPLDKPLVADGSICVLRGNLAPRGAVLKPSAA
TPALMKHRGKAVVFEDIDHYKARIGDPDLEIDADSVMVLKNCGPKGYPGM
AEVGNMGLPPKLLAQGITDMVRISDARMSGTAYGTVVLHVAPEAAAGGPL
AIVRDGDWIALDSYAGKLDLEISEAEIAQRQAELQAKPAAPAKGGYQQLY
IDRVLQADEGCDFDFLVGCRGAEVPRHSH
>Rfer_2934 glutamate synthases, NADH/NADPH, small subunit
MGKVTGFMEFERIEEGYKPVPERLKNYKEFVLGLDDKQANKQAARCMDCG
TPFCSSGCPVNNIIPDFNDLVYRGDWKNAIEVLHSTNNFPEFTGRICPAP
CEAACVLNVNDSAVGIKSIEHAIIDRAWSEGWVTARPAQHKTGKTVAVVG
SGPAGMAAAQQLARVGHDVTLFEKNDRVGGLLRYGIPDFKMEKSHIDRRV
EQLQQEGVTIRTGVLVGAMPKGSKVTNWAKETISPAQLQQDFDAVLLTGG
AEQSRDLPVPGRDLDGIYFAMEFLPQQNKVNAGDKLKGQLRATDKHVIVI
GGGDTGSDCVGTSNRHGAASVTQFEVMPQPPAEENRPLTWPNWPMKLRTS
SSHEEGCTREFAVSTKEFIGEKGKLTGIKTVHVAFKDGQMVEIAGTEKTY
QADLVLLAMGFVHPVATVLEAFGVAKDARGNAKATTEFSGGYATNVAKVF
AAGDMRRGQSLVVWAIREGRQAARAVDEFLMGFSNLPR
>Rfer_0289 inner-membrane translocator
MLTILFDGIAYGMLLFILAVGLAVTMGLMNFINLAHGAFAMVGGYITVLL
MQKFGVPFLLCLPLAFVGSALLGALLERTLYRPLYHKPHLDQVLFSIGLT
FMAVASADYFIGSGQQIIQLPEWLKGRTEFGDGAWMLGMGHYRLFIIAVC
AALTVALQYVLTKTRFGSRLRASVDDQRVAAGMGINVNLVFLTTFAVGSG
LAGLGGALGAEVLGLDPSFPLKFMIYFLIVVAVGGTSSITGPLLAALLLG
IADVAGKYYIPKLGGFIVYSLMIAILIWRPQGLFVRKGGK
>Rfer_0930 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like
MSAPLIEVKNLHRYFGAPAKPVRAVDDVSFSIQPGETLGLVGESGSGKST
IGRTLLRLIESTSGQVLYRGEDLGSASSSRMRALRSKLQMIFQDPYASLN
PKMRVKDILGEALQVHGLAKGRKVRDARIAELLELVGLRAEHASRYPHEF
SGGQRQRIGVARALAVEPEFIVADEPLSALDVSIQAQVVNLLCDLRDRLS
LTMLFISHDLDVVEYLCDRVVVLYLGRVMEVAPTAALFARPLHPYSQALL
AASPKPDPEQKSERIALTGDIPSPVNPPSGCVFRTRCPHVIDACASIRPE
LRDMGQGRFKACIRDDIAVVTA
>Rfer_2458 Phosphoadenylyl-sulfate reductase (thioredoxin)
MSAIDLNARASGNFEAKLLETTAVLQQAARDYAPLSAGTAPRVTLACSLG
AEDMVIAHLINSLQLDIGIFVLETGMLHTETLDLLARLKASSRAPVQVFT
PATEAVVQFVAREGKEAMYKSIELRKACCNIRKMEPLNRALTGKAAWITG
LRREQSGARADVPLIDTSDATRVKLNPLANWTWGDVWHFIAINKIDYNPL
HDQFYPSIGCAPCTRAISLGEDFRAGRWWWEDETAKECGLHVKASPLPEK
APT
>Rfer_1570 phosphoserine aminotransferase
MNRPYNFSAGPAAMPQEVLTEAAAEMLDWHGSGMSVMEMSHRGREFVSIY
EQAHLDLRELLAVPDSFKILFMQGGGLAENAIVPLNLSARVSPAGAAGSA
DFVVTGGWSLKSQQEARKYCTVNIAASNESDGHTTLPGPASWQLSHGASY
VHICSNETIHGVEYHTLPDLQALGSEAALVVDCSSHVASRPIDWSRVGLA
FAGAQKNLGPAGLTLVVVREDLLGHALAVCPSAFNYKTVADNQSMFNTPP
TYAIYIAGLVFQWLKRQGGIAAMEARNQAKAALLYDAIDNSQLYYNKVAP
NCRSRMNVPFFLRDESLNDAFLAGAREHGLLQLKGHKSVGGMRASIYNAM
PMEGVQALVNYLHEFQKRRS
>Rfer_1794 3-isopropylmalate dehydratase, small subunit
MQKFTLLKGLVAPMDRENVDTDAIIPKQFLKSIRKTGFGQNLFDEWRYLD
AGFPGQDPKSRKPNPDFVLNQPRYQGASILLARKNFGCGSSREHAPWALD
QYGFRAIIAPSYADIFFNNSFKNGLLPIVLSEIQVSQLFDEAAAFPGYAL
TIDLERQVIIKPDGKELPFEVQAFRKYCLLNGFDDIGLTLRQADKIKAFE
AQRLAQKPWLARTLLA
>Rfer_3171 inner-membrane translocator
MKQQQKIVVFLLAAVGLLILPLILQSFGNAWVRIADMALLYVLLALGLNI
VVGYAGLLDLGYVAFFAIGAYMYGLLASPHLTETFAWIGAMFPDGLHAPI
WVVIPAAAGLAGFFGLLLGAPTLRLRGDYLAIVTLGFGEIIRVFLNNLDH
PVNITNGPKGMSQIDSLSFFGLNLGRTLDIGGYELNSVSLYYYLFLALVL
FSVLISHRLQLSRVGRAWMAIREDEIAAKAMGINTRNLKLLAFGMGATFG
GVSGTMFASFQGFISPESFSLMESVMIVAMVVLGGIGHLPGVILGAVLLS
ALPEVLRYVAGPLQAMTGGRLDSSILRQLLIALAMISVMLVRPRGLWPSP
EHGKSLQQKGEGA
>Rfer_0596 binding-protein-dependent transport systems inner membrane component
MRALATLAAFARLPTFPAYATPADKVGWYALRVLCLGVLLFLLLPILVIM
PLSFSSSSFLSYPMPGWSMQWYDNLFSSDEWGRATRNSFIVAPLATLLAT
VLGTLAAVGLARVQFFGKGALMSLLIAPMVVPIVVVGVSTYLFFAKIGLA
DTYLGLILVHAALGAPFVLTTVLATLQNFNNNLVRASQSLGANQTQTFFR
ITLPIIAPGVISGALFAFATSFDEVVVTLFIAGPTQVTLPRQMFTGIREN
ITPTIAAVATLLIIFTTTLMLGLEWLRGRRR
>Rfer_3101 peptidase T2, asparaginase 2
MKSSKPLPLIAIHGGAGTMSRSSISVEQTMAYNDALQSILRAAQQLLADG
ASALDAVSLAVDLLEDCPLFNAGHGAVFTHDGTHELDAAVMDGATLRAGA
VACVSRIRRPLRAARSVMEHSEHVMLVAAGAEAFAEELGLEMVLPTYFST
DARRAQLRRALDTDATLLDHDGAALAFHPTAVSMAPLDEGSKLGTVGAVA
LDAHGNLAAASSTGGMTNKRPGRVGDTPLIGAGTYADNRTAAISCTGTGE
MFIRIAAAYDICARMAYAGQSLDAAAQEVVMNVLPTLGGRGGLIAVDAQG
NLSLPFNTEGMYRGYARVGVTPWTAIFR
>Rfer_0231 FAD dependent oxidoreductase
MSQPNCSSLWASTAAPDIEASALQGTVPADVVIVGAGFTGCAAALAMAQR
GARVRLLEANVVGWGASGRTGGQVIPGLKFDPDEIEAMFGPDLGPRMVNA
VGSVGDEVFGLIEQHAISCDAQRKGWLQPAFSTRSLDLALRRCDSWQRRG
ADVAPVGRSEMARLLGTDHYLGGWEDRRAGHVQPMSYVRGLAGAAQRAGA
VIHIDSPALSLTRQGAKWRVSTPQGAVDADQVLLATNGYTDGLWPGLART
VVPMMSFQAATIPISEDLGKSILPEGHAASDTRRLLWYFRRDAHGRLTMG
GRAPYREDLGAADADYVRNAVNRLYPQFKNTPFEFHWAGRVAMTQDHIPH
LNRLDNGLWAALGYNGRGVGMATLFGRYLADLASGVPAQDIPFPVTSMRP
IQGYPFTRLVARALVSYYRIRDQLEAV
>Rfer_0981 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like
MSAAPDTDILIEARGLAKHFPVRSGVLGMGHKAVVRAVDGVDLSIRKGET
LGLVGESGCGKSTTGRLLLRLIEPSAGSIVHEGVDLTTLDRRQMRERRRH
MQIIFQDPFASLNPRMTVASIIGEAFAIHGVGTSSERQTRVAELLDLVGL
PRSAAAKYSHEFSGGQRQRIGIARALALKPAFVVCDEAVSALDVSVQAQI
INLMQDLQRELGLTYLFISHNLSVVRHISTRIAVMYLGRIVEIATADELF
ERPTHPYTRALLSAVPIAHPNDQRHRHMLGGDVPSALDIPAGCRFAPRCP
VAQDRCRSEDPLLSPLPDGRRVACHYAA
>Rfer_1048 Peptidyl-dipeptidase Dcp
MTSVTCAAPAINPLLQDWSGPYGLPPFAAVQPDHFLPAFDVALAAHLAEI
DAIAGNPEPASFTNTMQAFDESGRLRSRTELLFHNLTASETSPALQALER
EMAPRQAAHNNAVYMNATLFQRIDSLYDQRNSLALDAEQLRLVERVHLDF
VRAGAKLAPEARQRYGAVMQELAGLCAQFGQNVLADEASFVLELKDEADL
VGLPKFVLAAAESASTQRGLPVGSHVITLSPSLAEPFLTFSARRDLRELI
WRARVARGAHTGSHDNRPVAARIMALRQEQAALHGYASYADYELVDRMAG
QPSAVIELLMQAWEPAKAQANADREALVAMAKSLGEPQELTAWDWRYLAQ
KVREQRYSLDDAEVKPYFALDNMINAMFDCAHRLFGISFVEQQGHALHHP
DARLWEVRGGGDELVGLFIGDNYARPSKRSGAWMSVFRSQSGHAGGTLPI
VINNNNFAKAAPTLLSFADVRTLFHEFGHGLHGLLSKAKYERLAGTRVLR
DYVEFPSQLFENWALEDEVLTRHARHYATGESLGAALLAKLKAARHFDQA
WQTVQYVGPALIDMALHSLPNGSPVDIAQFELQQCQLLGVPPDIGLRHHL
SHFQHLFSGASYAAGYYVYMWAEVLEADGFDAFTQASNPFDPETAALLLR
HVYSAGNTQEPMAAFRAFRGRDPQVAPMLKKRGLLSA
>Rfer_2392 extracellular ligand-binding receptor
MKLVRNVVAATVAALCVGGALAQAGSTVKIAFIDPLSGPFANVGQNQLKS
WQFVAERLSGAKNPAGVKFEVTGFDNKGSPQESLNSLKAAIDQGFRYVTQ
GNGSGAGLAISDAVSKHNARNPGKEVVYLNYAAVDPAMTNEKCDYWHFRL
DADTSMKMEALTAFMKDQPSVKKVYLMNQNYSHGQQVSKYFKEDIARKRP
DVKIVGDDLTPIGQVKDFSPYVAKIKQAGADAIVTGNWGADLTLLVKALN
DAGLKIPMYTYYAQVTGTPTALAAGGDSEVYVIAYGHANEPGEIGKIAED
FKQKFNDDYYTYATYNGINLMAAAMAKAKSSDPVKVAAALEGLTVKSFAG
EVQMRKSDHQLQQSMFVTKWQKVDKKNPYSVENTGYTFAPVKQMDAFIAS
TPTSCQMKRPG
>Rfer_1353 aspartate kinase
MALIVHKYGGTSMGSTERIRNVAKRVAKWARAGHQMVVVPSAMSGETNRL
LALAKELAPAKATESYSRELDMLAATGEQASSALLAIALQAEGLESVSYA
GWQVPIRTNSAYTKARIESIEDTKVRADLDAGRVVIVTGFQGLDELGNIT
TLGRGGSDTSAVAVAAAMKADECLIYTDVDGVYTTDPRVVPEARRLQTVS
FEEMLEMASMGSKVLQIRSVEFAGKYKVKLRVLSSFTPWDIDINEEAASG
TLITFEEDEHMEQAIVSGIAFSRDEAKISVLGVPDKPGIAYQILGAVADA
NIDVDVIIQNISKDGKTDFSFTVNRGEYAKTVDLLKEKVLPKLGAQEVVG
DTKICKVSIVGIGMRSHVGVASKMFRVLSEEGINIQMISTSEIKTSVVID
EKYMELAVRALHKAFELEQAPA
>Rfer_0585 amino acid permease-associated protein
MNPLDPSHHSGTHVLKPVLSTLQLWGIAVGLVISGEYFGWSFGWASAGTL
GFTITSIFIAAMYATFIFSFTELTTSIPHAGGPFAYSKRAFGPVGGYLAG
AATLIEFVFAPPAIALAIGAYLNVQFPALDPKLAALGAYLVFMTLNIVGV
QIAATFELAVTVLAIFELLVFMGVVSPGFSMAHFTKGGWSGEDSFSLAAI
PGMFAAIPFAIWFFLAIEGVAMAAEEAKDPRRSIPVAYITGILTLVVLAI
GVMVFAGGAGDWTKLSNINDPLPQAMKMIVGENSGWLHMLVWLGLFGLVA
SFHGIILGYSRQIYALSREGYLPPFFAKLHPRFKTPHRAILAGGAIGIAA
IYSDELIKIGGQTLTANIVTMSVFGAILMYIISMLSLFQLRRAEPLMVRP
FRAPFYPLFPAFALLGAGVCMATMIYYNALIFGIFLGFLAMGYGYFLMTS
HHRTHALAMNNMAADLT
>Rfer_3020 glycine cleavage system H protein
MSIKYTPDHEWINIDGNIGTVGITAHAQDALGDVVFVDLPEVGKTYAQKD
AAAVVESVKAAADVYMPANGEVVEVNEALRADPSLANSDPLGAGWFFKVK
LANPADLDALMDETSYTSYAADAH
>Rfer_0907 Drug resistance transporter EmrB/QacA subfamily
MTQSTALEALQIQYGPRYRWLLLLTVMIGTVASIMSSTIINVAVPDMSRY
FVLGQDRMQWVSSGFMVAMTISMLTTPWLLSRFGYRKTYSGAIWLLFVGG
IAGGLSSNFDLVLVARVAEGLASGVVQPIPAIIILRAFAADEQGRASGFF
GMGVVLAPAIGPSIGGLLVDWFSWRATFFMVVPFCIASLYMARRFIPVAH
MGQESSSESKANLDWFGLLLATTATLCLLNGLVTLQNGPITKSAVLLCVS
LVSLLSFVKWQHRLSHVHRGLHQQAPLMNLALFGHRQFAMGSIVSFIYGT
ALFGSTYLLPVYLQMGLGMSASYVGTLMMPAGLVLAITIPIVGRLADKRP
THILVSIGLTMLALGFGLMVTVGLQTAVWIIALWVIVGRIGLGFILPSLN
LGSMRGLSKNLIAQGSSVISFVRMVGGAFGVSLSALVLEWRLETHGQLLS
HPNTNPDRLTAFNESFLMLAGLCALAIVAAWQLRGTSRPIKTREVD
>Rfer_0410 protein of unknown function DUF6, transmembrane
MDTRKALDGQAIALMLVLCMVWGLQQVVLKATAADIAPVFQIALRSGAAA
VLVGLLMAVRGERMALADGIWRPGLVVGLLFGLEFLLLGEGLRHTCASHM
VVFLYTAPIFAALGLHWKLPTERLGALQWLGIALAFAGIALAFLGRSRGA
VAEPAQMLWGDFLGLLAGLAWGATTVVVRCSSLAKAPATQTLLYQLLGAF
VLLMAAAYATGQAHFRPTPQVWASLVFHSLVVSFASFLAWFWLLRKYLAS
RLGVFSFMTPLFGIAFGAWLLHEPIEPGFLLGAVPVLVGIVLVSGGGWVL
QMLSGLGLRRKNV
>Rfer_2247 Tartrate dehydrogenase
MSQKRIAVIAGDGIGQEVMPEGVRVLEAVARKFDIDLRFDHFDFSSWDYF
EKHGQMLPDNWKDQIGEHDAIYFGAVGRPDKIADHVSLWGSLLLFRREFD
QYVNLRPVRLMPGIIAPVVRRDGSRREPGEIDMLIVRENTEGEYSSVGGR
MYAGTEREIVLQETVMSRVGVDRVLKFAFELAQSRPKKHLTSATKSNGIA
ITMPYWDERVVEMAKAYPEVKVDKFHIDILCAHFVQRPDFFDVVVASNLF
GDILSDLGPACTGTIGIAPSANLNPERKFPSLFEPVHGSAPDIAGKGIAN
PIGQIWSGALMLDFLGHRDAHNAVMKAIEKVLDPASGAPRTQDLGGTAST
KDVGLAIVDAL
>Rfer_0239 ABC transporter related
MIKFNELNKWYGAHHVLQNINLEVAKGEVVVVCGPSGSGKSTLIRCVNGL
EKFQSGTLIVDGLSVANEANLRQLRMELGFVFQQFNLYPHKTALENVTLA
PIHVRKLPRKEAISRGREILEKVGLGDKFDAYPQQLSGGQQQRVAIARSL
CMQPKVMLFDEPTSALDPEMINEVLDVMVSLAKDGMTMIVVTHEMGFARK
VADRVVFIDKGVIVEVAEPEAFFTAPKNERTREFLGKILQH
>Rfer_3946 N-acetyl-gamma-glutamyl-phosphate reductase
MHKIFIDGEAGTTGLQIRERLQTLPGIELISIAPEQRKDAAAKRALMAQV
DLVVLCLHDEAAIESVAMIDDMARATGQIGPKIIDASTAHRTAPGWVFGF
PELVAGQREAVSQARRVANPGCYATGAIALLRPLIDAGLIPKDFPITLPA
VSGYSGGGRPMIEAYENGSAPAFELYALGLKHKHIPEIMKYTGLLRRPLF
IPSVGNFRQGMLVQVPLHLDLLPGHVSAQDLQDALTQHYAGSEWVSVLPA
TPDNKLDPLALVDTNRMELRVFANRQVHDDFHHAVLVARLDNLGKGASGA
AVQNLQLMLGL
>Rfer_3729 aminotransferase, class I and II
MNNPPLITAPSGWQLARRAARMNPSVIREILKVTERPGIISFAGGLPSSK
TFPVAEFEAACAKVLRDDPAAALQYAASEGFGPLREMVAENLRVQAASAG
LTWQVDPAQVLITTGSQQGLDLVAKVLVDAGSRILVESPTYLGAVMAFTP
MEPEVVSVASDDDGVDMEALRQAAVAAGTGEAARFLYVLPNFQNPTGRTM
SEARRAALSTEAARLGLPLIEDNPYGDLWFDAPPPAPLTARNPDGCIYLG
SFSKVLAPGLRLGFVVAPKAVYPKLLQAKQAADLHSPGFNQRMIAEVMKD
GFLDRHVPTIRALYKSQRDAMLEALAQHFPASNSQPDQSLTWNTPAGGMF
LWARLPKDMSAVDLLPFAVDKGVAFVPGAPFYADHGDPRTLRLSFVTPSV
AEIHQGVAALAAAIKERQAA
>Rfer_0284 protein of unknown function DUF6, transmembrane
MLAWLAYLTASVVWGSTFLAIAFAIETFTPFGLSAVRFIPAGILALLIGQ
IRKERFPSWREIPHIALVGITLLGVCMGLIGWAEGRVSSGVTAALGATVP
LFLALMDPRGLDPKAWCGLGMGFLGVLVLLWPSGQGPALSGAAALVLSAS
LWAYGTLYGKRHADESGHFSQIGVEMLVAGVLSLLAASLTGGISHGTWNP
RSLLAVGYLITFGSILAYSAYIYLSKVWPCAKAGTYAYWNPIVGVLLGCW
FRGETFHARMLPGLACILLGVALVQIPWPKALRFGSANQGAKQISR
>Rfer_1894 major facilitator superfamily MFS_1
MQLFFRQAGQQASRPIVWLIGFFAFLNVYSMQAVLPMVMQDFHASPVQAG
LTVGATVLAVALVSPFMGMLSDAFGRKVIICASLFALTVPTALIPVAGSL
NALIFLRFLQGLAVPGIVVVLIAYLSEEFHSGGVARMTATYVGGTVMGGF
CGRFITGHAGHLLGWRGAFVTLALLNLFGALLVLWLLPPSRYFVANRNIR
AGFGTLWRHLHHKRLMAACAVGFCVLFSLVGTFTYVNLHLASSPFNLSSA
GLANVFSVYLVGVLATPLAGPYVVRFGFLRSLLGALALSAAGLSLTLLPS
LTAVIIGLTVCSTGVFICQSATLSAIAQNVSEGRSLATGIYYMSYYAGGA
AGSLLAGMAYEGWGWGGSVLSIALMQALAAVIAAVAWRQPAQSGG
>Rfer_0460 5-methyltetrahydrofolate--homocysteineS-methyltr ansferase
MKALHYTRGQKLPEILQHRIMVLDGAMGTMIQRFKLGEAQYRGERFKDFH
KDVKGNNELLSLTRPDVITDIHERYLAAGADMIETNTFGATRVAQADYDM
ADLAFEMNLASAKLARAACDKFSTPDKPRFVLGALGPTPKTASISPDVND
PGARNVTFEQLRAAYYEQVEALVQGGADALLVETIFDTLNAKAALFAIDE
FFEASGQQLPIIISGTVTDASGRILSGQTVTAFWHSVRHAQPLAVGLNCA
LGAALMRPYIQELAKAAPDTFISCYPNAGLPNPMSDTGFDETPADTSRLI
GEFAAEGLVNIVGGCCGTTPEHIGAIHDKVAPLAGRVLQRNVFYPEAA
>Rfer_3599 translation elongation factor Tu
MGKEKFSRSKPHVNVGTIGHVDHGKTTLTAAITSVLAAKFGGTAKAYDQI
DAAPEEKARGITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMD
GAILVVSAADGPMPQTREHILLARQVGVPYIIVFLNKCDMVDDAELLELV
EMEVRELLDKYEFPGDTTPIIHGSAKLAMEGDKGPMGEQAIMKLADALDS
YIPLPERAIDGAFLMPVEDVFSISGRGTVVTGRVERGIIKVGEEIEIVGI
HDTQKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREDVQRGQVLCKPGS
IKPHTHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGAIELPEGK
EMVMPGDNVSIIVKLINPIAMEEGLRFAIREGGKTVGAGVVAKIIA
>Rfer_0219 transcriptional regulator, XRE family with shikimate kinase activity
MSSTILHTSGFTPSISSADQDSSPTFVNPAEGGGDGEKNPFLAALGERVR
ALRARRGMTRKALAMVADVSERHLANLEYGVGNASILVLLQVAGALQCSL
GELIGDVTTSSPEWLMIRELLEQRDDATLQRVRIAIGEMLGTGGGNAGLS
PRIALIGLRGAGKSTLGQMLADDLGFPFVELSREIEKFAGCSVSEIQALY
GVSAYRRYERRALEEAIQIYPEAVIATPGGLVSDAATFNELLAHCTTVWL
QADPEDHMKRVTAQGDLRPMAASKEAMEDLKGILHGRAPFYSKAQFKLDT
SAQPLGPTFNALRDMVRKVLQLPA
>Rfer_1084 L-serine dehydratase 1
MAISVFDLFKIGIGPSSSHTVGPMRAARLFAQTLEREHWLDATQGVTCEL
YGSLGATGKGHGSDVAVMLGLMGHAPDTVDVAAVSGLIQTVRAQQTLALL
GVKPIVFKEKEHVLMYRREALAEHPNGMKFSAVDAQGQLLRQAKYLSVGG
GFVVTAGSSNEAVLSEYQKVPYPFTSGAELLATCQQQRLSIGELMWANER
TWRSDDEIRAGLLNIWRVMRECVQRGLSAQGLLPGPFKVQRRAPVLAAQL
RERAEQALADPLSVLDWVNVYAFAVNEENAAGGRVVTAPTNGAAGVIPAV
LHYCDRFVLSQHARTAQTDATGHNSADDAVINFLMSAAAIGMLYKLNASI
SGAEVGCQGEVGVACSMAAAGLTAVMGGSPEQIENAAEIGMEHNLGLTCD
PIGGLVQVPCIERNAMGAVKAVNAARMALAGNGQHVVSLDKVIKTMRETG
ADMKTKYKETSRGGLAVNIVEC
>Rfer_0940 pyridoxal phosphate-dependent enzyme, putative
MSNIPFDPRPGLGLRPIINVSGTMTELGASIVSPEVVAAVSDILPHFVEI
SHLQRLASRQIAMSTGAQAGYITASSASALTLSVAACMTGSSLSEIEQLP
DTQGMRSKVLLQMGHAIHYGASIEQTIRLSGAQVRLIGTATLASGYQLEA
AIDDDTAAAVFVVSHHVVDHGQIGLPEFVEICHARNVAVIVDAASEYDLH
GFLSAGADIVIYSAHKFLGGCTAGVVAGKLDLVRSMYLQNRGIGRGFKVG
KESIVGSIAALRAWSTRDHIAVRAREAAAMQVWMELFAPLPGVQVAIEPD
PTGNPLSRLRIQIDPASAGITAWDLADRLEQHSPPIIVRDHDVEQGFLVL
DPCNLHPGQEHIVADAVIAICRAAMRSPESSRTLVERRAANAQSLLSWPD
>Rfer_4065 extracellular ligand-binding receptor
MQTSSISQRRRALLLAAGASLVVPLAHAQAGEDIVIGGSIPMTGVFAFAG
VGINAGIADYVKIVNDGGGIKGRKLRYVPEDTGYKVDVSVAAFKKITSQN
KVNLYYGDSTAFSRTINPELERTGNILMTGASFATELNDPVKYPNQFLVG
PDYTEMFGILLRHIAKEKPGAKVAFVYSDSEFGRDPIDTSEALAKKLGLS
VPVKIMTAPGSVDVSTEVIKLRRAAPDYTIFHGYILAPIPEFITQGKQMG
MTSKWMGTFWTMDSSTVMKMGEAGDGFMGVMPYRYYYDTSAKAPMLDKIR
QLHPDYQSTAYIQGFLAAMLFTEAAKRTLDAGKELNGKNFKAALNSIKDF
DTGGLIGVPITIKGNSIPVGRVYKADMKAQKMVAASDWIAL
>Rfer_3002 protein of unknown function DUF6, transmembrane
MTSLPPTKPWRTEFVLLAAIWGSSFLFMRLGAQEFGAIPTAGLRVSIAAL
FLGPLLLWRGLWPQLARHWKKIFVVGVLNSAIPFACFSFALLSISTGLSA
ILNATVPLFGAMIAWLWLKDRPHGLRILGLLIGFAGVALLAWDKASFKPG
ASGLATGWAVLACLTACLCYGISASYTKRYLSGLPSLVTATGSQFGATLG
LALPTLWLWPTRAPGTTAWLALLAVGVLCTGVAYILYFRLIENLGPARSL
TVTFAIPVFAVIYGVIFLGEVVSLWMLLCAAIIVCGTALSAGLLQLRR
>Rfer_0234 ABC transporter related
MISIRNIRKSFGSNLVLDDISLDVSQGEVVCVIGASGSGKSTLLRCVNGL
ETYDAGDITVDGQRVDHVGRQMVAIREKVAMVFQRFNLFPHRTALENVME
GPIYVKRESRESAMRNARALLAQVGLAGKEDAYPASLSGGQQQRVAIARA
LAMQPRAILFDEPTSALDPELVGEVLSVMRALANQGMTMMVVTHEMGFAR
EVADRVIFIDRGHIVEQGPARAVLAAPQHERTQDFLRRVTHPM
>Rfer_0761 gamma-glutamyl phosphate reductase
MIPLNTTDYANALGLKAKQASALMARAPTATKNAALRKLAGLLRANVNAL
QIDNARDIERAVQSGLAAPMVDRLKLSPQVIETCAQGCEQLAGMADVIGE
IIGMKQQPSGIRVGQMRVPIGVFGMIFESRPNVTIEAASLSIKSGNACIL
RGGSEAIESNKALARLVQQALTESGLPAEAVQLVQTTDRAVVGQLITMPQ
YVDVIIPRGGKGLIERISRDAKVPVIKHLDGNCHTYVDDPCDIAMAVKVA
DNAKTNKYSPCNATESLLVARAVAAEFLPSIGRVYAAKGVEMRCDPQALA
IFKENQPVAPVNIGHDAIDSAVELKPVLVLAQESDWFEEYLAPIISIKVV
AGVDEAIAHINRYSSHHTDAILTRDHMHAQQFLREVDSASVMVNTSTRFA
DGFEYGLGAEIGISTDKFHARGPVGIEGLTSLKYVVLGDGEIRA
>Rfer_3773 major facilitator superfamily MFS_1
MSKMNASFEGKGVVATHAMTPTELRASFSLASIFALRMLGLFLILPVFAI
EAAKYPGGDDLALIGLTMGLYGLTQAMLQFLYGMASDRLGRKRVIIFGLL
LFAVGSFVAAWAPSLTWLAIGRAVQGAGAVSAAVTALLADQTRDEVRTKS
MALVGISIGLMFALSLVAAPLLVAMVGLGGLFALTGVLALLGVAVVIWWV
PAEPQQHKDMPRGGLLEVLRLPALLRLNFGVFVLHAVQLAMWMAVPAMLV
QAGLARDHHWWVYLPAVLGSFVVMGGSLFQLERRGYLRAVFLISIGLTAA
VQLGLLLLASSTPSVGVMVALLFVFFYGFNVLEASQPSMVSRMAPAHARG
AAMGVYNTLQSLGLFAGGVMGGWLVKHVGAPGLFAVCAGLMLLWLLVAWP
MSALAVQAPGLAPKAG
>Rfer_2411 Isocitrate dehydrogenase (NAD+)
MNSSNLIPVTLIPGDGIGPEIVDATLAALDALHAPFDWDRQIAGLGGIQA
AGDPLPAATLDSIRRTRLALKGPLETPSGGGYRSSNVRLREEFQLYANLR
PARTIIPGGRFDKIDLVVVRENLEGLYIGHEYYIPIDDDPRAVAMATGIN
TRAGSRRLLEFAFEHAVATGRKKVSIVHKANIMKALTGIFLETGIDLYER
KYKGRFELETVIIDACAMKLVINPWQFDMLVTTNLFGDILSDLVAGLVGG
LGMTPGANIGADAAIFEAVHGSAPDIAGKGIANPIALMLAAAMMLDHCKL
PELAARLRKAIDETLNIDKVRTGDLGGTASTAAFTKALVSRIRTG
>Rfer_0934 Twin-arginine translocation pathway signal
MSHILRKLKNTFTSKEIGMQQKFWINRRKAVALALVVGGTALLPIGAQAQ
ALSKSALNLAMIAEPQTLDPMASPTDLVATIMQHVYEPLFTFDASWKIVP
MLAEGLPKVSADGKRYSITLRKGVQLHNGRELNAEDVVASLKRWMEVSPR
GKALSKEVEDLSINAGHDIEITLKAPYAPLLSQLAMPSGMAAIMAKESIA
TPLKEFVGTGPYKFKERRPDQYVLLTRFDQYSARKEAPSGYGGKKTAIAN
ELRFIPVPNANTRVEGALAGQYHFADLLPTEALGRLEKSGGKTVPILTPS
FGFPYFVFNTKEGVMASQPLRKAVQTSFGEGEMLAAGFGDTRFFTAEPNH
FPKGTPFYSNAGAANYNERDAVKAKGQAVQAGYKGETIRILTSRQYDFHY
NMALIMAEQLKRAGFKADLNVVDWATLVQRRGDSRLWDIYITHSGQFPEP
MLSPPQLGEGAPGWWSSPAKQAALAALNHETNPAKRGALWGAVQQVIYDE
VPYVNAGKFNSLSAKSPALQGYVPSTWPFFWNTGLKN
>Rfer_1520 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit
MNWLHTAIALIEADYQRSADTHLIALPLPGFARCGIDLYLKDESTHPTGS
LKHRLARSLFLYALCNGWLHAGSTVVESSSGSTAVSEAYFARLLGLPFIA
VMPQNTSPEKIAQITFYGGRCHLVDSASAVYDEARTLAAQTGGHYMDQFT
YAERATDWRGNNNIAQSMFTQMARERHPVPRWIVVGAGTGGTSATIGRYV
RHQRHATQVCVPDPQGSVFGEFHRTGDASLTGPGSRIEGIGRPRVEASFI
RTLVDRMLEVSDVDSVAAMRVLSHLLGRKVGPSTGTNFVGMLILANEMRS
QGQQGAILSLLCDAGERYLASYFDPDWVRQHLGDCTAAATHIQSQLS
>Rfer_4159 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
MELDFSPVFSGWRNLIQGASVTVEITAMALVLGCVMGLLVGIGRLKPERR
VIYALCTSYVAVIRGTPLLVQLFLLFFGLPQFDILLPAFVCGVIGLGIYS
GAYVSEIVRGSIQSIDRGQMEAARSVGMSYGTAMRTIILPQALVRMIPPL
GNEFIALIKNSALVSLLTIHDVMHEGQKIISVTYRSLEVYLAIAAIYFVL
TGLTTLALRRIEQRLRAGGMVQ
>Rfer_3725 transcriptional regulator, GntR family
MLVKAASQSLADQLAERFAERIRTGLLAPGTRLPSVRQCAQQQGVSPSTV
VAAYDQLLAQGLVEALKNRGFYIRNRAVAPVNSSHNAINLMVFDDAPARV
KTTLEAQHVPVNATALIRGMFHGGSEQPQPGMGAFPPDWLQTTFMAAAVR
RVTSGKQLQAFSLQYGEPAGDGGLRQSLSTKLNALAIHAAPQQIITTVGA
THALDLVSRTLLRAGDYVMVEEPGWAIEFARLDALGMHILPVPRGPDGPD
LAVMARYCELHSPKLFVSVSVFHNPTGYCLTPGSAHRVLQLANQHNFYIA
EDDTYSHIAPEHATRLCALDGLQRTIYVSGFAKILAPGWRVGFMAAPTAL
VERLLDTKLLATLTTPALLEKALAWCIDQGQLRRHAERIRTRLNQARGRS
ARLALAAGCTFAAPPAGLFGWVDTGVDTELLSQRMLDAGYLLAPGALFHA
SRAPSTLMRINFCTTQDAQFWQVFQTVRAGM
>Rfer_1014 inner-membrane translocator
MSATKSFQMAVVAAVVLLLAGQLAPTWLQFLVTMSASNGLAVLGIVVLMR
GGGATFGQGMFFALGAYAAALAPTLLGVQDAVLRIFLGTLVAGLIGAICA
PLLVRYRGIFFAMLTLALSMVMFGLLSKSSALGGSDGINIVKPTVLGMAL
HSGNAEYVLYCLTVVVSVAAGWLVSVYWNSAAGLMALAVRGNPLRVEYLG
ASARRSLGTSFVICALLGGASGSITAQALGHVEPNFANWTTSGELVFVAV
LAGYRRVPAVFAASLLLEIVRSFSNLYFPNTWQLALGTFMLLVIMFRPEG
LGSLWPASGRRKAEPALAVPSVTGGQS
>Rfer_1013 inner-membrane translocator
MQIVFPIVIDAVAYASWLFIVSLGMTLVFGVLKILNMAHGSVYAIGAYAA
ATAVALAAALGLPPAFSLVAMLLSAVAVAVTVGPLLERGLLARYYGRDEV
VLLLVTYALFLMLEDVTKLIWGVNPYYVSEPAQLFGNVLFAGMRIGGYDL
FLMVLAAVCGLITWYVLNRTTSGKIVLAVIHNPEMSASMGVNIQRVYVVA
FTVGVFLAALGGAFTAPMISVQPGLSVSVIIISFAVVIIGGLGSIQGAAV
GALVVGVARSLAVHLLPEIELFSIYLVMAAVLIFRPEGLFQSVKARLI
>Rfer_2459 Sulfate adenylyltransferase
MNAPILSNLLQPMTHHPRPDHLSNAHLDALEEETIFILREVAAAFERPTL
LFSGGKDSLVMLKCAEKAFMDSKTGGHIPYPLLMIDTGHNFHEVTDFRDA
RAKELGAELIVRSVEDSMARGTVRLAHPGESRNVHQSVTLLEAIEEFRFD
ALIGGARRDEEKARAKERIFSHRDSFGQWQPKEQRPELWTLFNTRLHPGE
HFRVFPISNWTELDVWQYIARERVALPSLYYTHQRAVVERKGLLVPVTDL
TPAKPGEQVQTRNVRFRTVGDITCTCPVESRAATPDDIVIETLAADVSER
GATRMDDKTSEASMEKRKKDGYF
>Rfer_0486 protein of unknown function DUF6, transmembrane
MHATTNSRFEAIEAICRRPPLSKTALAAAALTLNAFVWGVSWWPFRSLQS
LGLHPLWTTALIYTFGLLCLALVQPRAWRGFLRHPELWWLLLAAGLTNVG
FNWAVTVGDVVRVVLLFYLMPAWVVLLAWPLLGEKPSTGSLVRLALALAG
VVIVLKTPASPWPVPESLADWLALMAGFCFALTNILLRRLNHTPGESRML
AMFVGGALLAGAAAVLGVGLDVVTPLPAPKLAWVAWALLISLAFLAGNLA
LQYGAAHLSASATSLIMLSEVIFASGSSVLLGAGTLSARTLIGGALILLA
SLLSVLSFRQPS
>Rfer_3604 Threonine aldolase
MTHKTQTIKVDLRSDTVTQPTPAMRAAMLAAPLGDDVFGDDPSVNALQDK
LAALLGFEAALFVPTGTQSNLCAILAHCQRGDEYIVGQYAHCYRWEGGGA
AVFGSVQPQPLNHQPDGTLLLADIEAAIKPDDEHFARTRLLALENTWGGK
LLPFDYVQQATELARSRGLSRHLDGARLFNAAVAQAAAHGTDALLEARRI
AQCFDSVSVCLSKGLGAPVGSVLCGRQDFIARAHRIRKMAGGGMRQSGLL
AAAGTYALDHHVARLADDHALIRRLAEGLSKLAGLVVEPAQTNILFVDLV
GEAKARAAELIPYLAARGILITGLYRLRFVAHLDVDAAGIDHTVAAMRDF
LMGRP
>Rfer_1487 putative transporter signal peptide protein
MFVYSRKALKLLALALCVPTLTFAQATQTPTSAPIKIAMIEGLSGPFANT
GEAVFRNLIWAVERVNARGGVKIAASGELAGGGRPLALERYDSKGQNEEA
LTALKSAIDDGAQFIMQGNSSATAAALIDAINKHNEREPGKRVLFLNYSA
VDPILTNEKCSFWHFRFDAHADMRITALMEVLKEDKALKSVYIIGQDYSF
GHAVAREAKRQLAASRPDVQVVGDELHPVGRVKDFLPYAAKIKASGAQAV
ITGNWGNDLTLLVKAAKEVGFEGKFYTFYGNALGAPAAIGDAGIGKVVAV
ADWLPNVQTAQSEAFYQSFRQRFPNPADDYVHMRMQLMVESLAQAIEKAN
TTNSIAVARQLERARVVFGSQSGAMRAADHQFQQPLVVGVMDKQGAPGVK
FDVEGSGYGFRVIKTIAAKRAELPTTCKMQRPVE
>Rfer_2047 aminotransferase, class I and II
MNPLLTLLQPYPFERLRQLFSGVTPNPALRPISLGLGEPKHATPAFIQQA
MIEAIGRTPSGLASYPATQGEPALREAFAQWLKKRYAIHADPATQMLPVT
GSREALFALTQTVVDPGARQLGHEKPLVVCPNPFYQIYEGATLLAGAQPY
YVASDPARNFAPDWAVVPASVWARTQLLIVCSPGNPTGAVMPLSEWQMLF
ELSDRHGFVIGSDECYSEIYFHDDAQGGPPLGGMEAAAQLGRLDFKNLIS
LTSLSKRSNVPGMRSGFVAGDAAIIKQFLLYRTYHGCAMSPVVQAASTAA
WRDEQHVVENRALYRSKFAQVTPLLAEVLDVALPDAGFYLWAKVKGNDTD
FARDLFALYNVTVLPGSYLAREAQGGNPGAGRIRMALVAETAECVEAARR
IAQFVKSRT
>Rfer_0159 Diaminopropionate ammonia-lyase
MPQLAKHPFTLLPNARFQQAEPYGAHRSTLLSASALAQAQTVITSWPGYT
VTRLCSLPVLARTAGVASIHYKDEATRFGLGSFKGLGGAYAVARLLCREL
GQRLGRPVSHADLQSDPALRQACGDITVTCATDGNHGRSVAWGAQMLGCR
CVIYIHATVSEGRKDAIARYGAQVVRTAGNYDDSVQQADRDAKTNGWFVI
SDTSYPGYMDIPRDVMQGYQLMVHEAVSALPQWPTHVFVQAGVGGFAAAV
CAYFWERSAEQRPVFVVVEPERADCLLQSARAGAVVAVKGDLDTLMAGLA
CGEVSLLAWDILATGANAFCTIPDAAAVDTMRLLASPQGGDPVIVAGESA
VAGLAAALLAAHDSTARASLGLGVESRVLLFGSEGDTDPALYQQLVGRSA
AQVLQDGASV
>Rfer_0594 extracellular solute-binding protein, family 1
MKLKPIVAACALLACAASFAQTQITVVNFGGANGNAQKKAYFEPYEKATG
NKIVGVEYNGEQAKIKAMVEAKQVNWDVVEVESPDVTRGCDEGLFEKLDY
SKIGNKADFTPAAIHECGIGTFVWSTVMAYNADKLKTAPTTWADFWDVKK
FPGKRAMRKGARYNLEFALMADGVAVQDVYKVLATKDGAERAFKKLTELK
PNIQWWEAGAQPPQFLVAGDVVMTTAYNGRIDAAQREGKNLQITWTGGIY
DLDYWVMPKGASNREATLKFIAMASSSKEQAEYAKLISYGPTNVKALTML
DAKVLGKLPTAPANAKTALQFNVGFWADQGEALEKRFAAWAAQ
>Rfer_3170 ABC transporter related
MTDTVLNVANVSKRFGGLQALSDVGIQIKRGQVYGLIGPNGAGKTTFFNV
LTGLYAPDSGSFELAGKTYQPNAVHLVAKAGIARTFQNIRLFAEMTALEN
VMVGRHVRTHSGLLGAIFRTPGFKREEAAIAERAQELLDYVGIGKLADYK
ARTLSYGDQRRLEIARALATDPQLIALDEPAAGMNATEKVLLRELIDKIR
NDNRTILLIEHDVKLVMGLCDRVTVLDYGKQIAEGTPADVQRNEKVIEAY
LGTSGH
>Rfer_1032 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
MTYVFEFSDVLAAWPRLLSGLKYTAELSAAGIVFGFVLGTLSAIVRHQKL
PVLNGIVSVYVEAIRNTPFLVQAFLVFFGLSTLGIRLSAEFCAALALTLN
AGAYTCEIMRAGLDATHKGQIEAAESLGMGWPAIYWHVMLLPAIEKVYPA
LTSQFVLLMLSTSITSQISAEELTGVANIVQSETFRSFEVYLLVGAIYLA
LSFVFRMIFWVVGKLCFTSTRVLGPSS
>Rfer_2513 major facilitator superfamily MFS_1
MTASLRKIPASIWALGFVSLLMDVSSELIHSLLPVFMVTTLGISMFVVGL
IEGAAEATALIIKVFSGALSDYWGKRKPLAVLGYGLGAFSKPLFALATSG
GWIITARLADRVGKGIRGAPRDALVADIAPPELRGAAFGLRQSLDTVGAF
LGPTLAVAFMLLWNDNFRAVFWVATVPAFMCVALLVWGVKEPDQPITTKR
SNPISRANLARLSPAYWWVVGVGAIFTLARFSEAFLVLRAQQGGLALAWT
PLVLIGMNFVYASCAYPFGKLADKVRHTSLLGWGLLLLIGADSLLAYSNS
GVVFWAGVALWGLHMAMTQGLLAAMVADTAPTDLRGTGYGFFNLLSGVAM
LIASGLAGWLWQGWGASFTFVAGIGFAALALLLLVLQPRGLAR
>Rfer_3694 Histidinol-phosphate phosphatase
MGTMKLVILDRDGTLNQDSAEFIKTPEEWLPLPGALEAIARLNHEGWHVV
IASNQSGLGRGLFDVSMLNAIHAKMHKMLAAVGARVDAVFYCPHAPDEGC
HCRKPEPGLFEQIGERYGLDLHGVPTVGDTARDVLAGVRVGCEPHLVLTG
KGATYRGRRLPHNFPKATQVHEDLAAFADFLIARDTEKAELATTKLSK
>Rfer_0290 inner-membrane translocator
MSNTQDLLRQTGRWKRWEVPLWLLALASPLLLSGHALIINEIAIVALFAL
SLDLILGFTGIVSLGHAAFFGMGAYSAALFAKLVMPDPLVGLAVGIACAA
LLGALCSATILRGTDLTRLMVTLGVALILGELANKLDWLTGGADGLQGVM
MGPLLGQFEFDLTGRTAAWYSLTVLLVVFVITRRFVNSPFGATLKAIRDN
RLRAMAIGIAVNSRMALVYTVAAALAGAAGALLAQTTGFASLDLFEFHRS
ADVMLILVIGGVGWLYGGITGAIVFKLMQDAISSITPQYWTFWIGLFLVV
LVLVGRERLIRPWTWFGKGKTGGAA
>Rfer_0931 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like
MKPPLTSPDPLRLDVRNLSTFFDTDEGLIRSVADVSFSIHPGKTTALVGE
SGSGKSVTSLSLMRLLSRTDSTQVSGQALFTNRAGETLDLLALPEPAMRR
IRGNEIAMIFQEPMTSLNPVFTVGEQIAESVRLHMGLDRAAALAHALRML
ELVEIPAATRRLHEYPHQLSGGMRQRVMIALAMACNPTLLIADEPTTALD
VTIQAQILELMRRLQRETGMSILFITHNLGVVAHHADDVAVMYAGRIVEA
APVRALFTSPQHPYTQGLLACLPAQQRKRELANGETRVKRRLYAIRGQVS
SPLSPPPGCAFEPRCDRALAACKEAMPELESAGPQRAARCILVSEAALVL
TETA
>Rfer_2391 extracellular ligand-binding receptor
MKFVMNLVAATAALLCAGGALAQKGETVKIAMIEGLSGPMANVGQNQLKN
WQFLADPANGVRNPAGVKFEIVGMDSKGSPQEALNTFKAAVDQGFRYIAQ
GNGSGAALALSDAVAKHNERNPGKEVVYLNYSAVDPALTNEKCNYWHFRL
DADTSQKMEALTSFMKDKPEVKKVYLLNQNYSHGQQVSKYFKEGMARKRP
DAQMVGDDLVPMGQVKDFSPYVAKIKASGADTIVTGNWGQDLTLFVKALN
DSGLKLPMYTYYAGVSGTPTALAAGGEGEVYQIAYNHSNYMGVMGKLTND
FQKKFGDDFYTFSIYNGLVLLSEGMAKAKSTDPVKVAAAMEGLKFQGFNG
DSEMRKSDHQMQQGLYISKWQKVDKKNPYSAEKTGYTFAPVKYIEAYVAS
TPTSCQMKRPG
>Rfer_4160 extracellular solute-binding protein, family 3
MNFRRTFLLSCFAVASLGAAHSNAQDVLRVGTDATFPPMEFVENDKRTGF
DIDLVEAMGKAMNKRIEWVDIDFKGLIPGLVSKRFDMSVSAIYITDERKK
VVDFTDSYYAGGLVAMVKDGNTGIKTLKDLNGKKVAVQVGTKSVGYLGTN
YPQVQLVEVEKNQEMFNLVDIGRADAAVTGKPAAFQYVRTRGGLHVLEQQ
LTTEEYGMALRKDTPDLTRAVNAALAKLKADGSYAQIVKKWFTNTAK
>Rfer_2174 Aspartate transaminase
MSLFSAVEMAPRDPILGLNEQFNADTNPAKVNLGVGVYFDDNGKLPLLQC
VLAAEKAMMDAPKPHGYLPIDGIAAYDAAVKALVFGADSEPVKSGRIATI
QALGGTGGLKVGADFLKKLNPKAKVLISDPSWENHRALFTNAGFTVESYR
YYDAATRSLDFAGMLADLNAAAAGTVVVLHACCHNPTGYDISPAQWDQVI
AAVKAKNLVPFLDMAYQGFGYGLTEDGAVIGKFVAAGLLFFVATSFSKSF
SLYGERVGALSVLCDNKEEASRVLSQLKIVIRTNYSNPPSHGGAIVAAVL
GTPELRALWEKELGEMRVRIKAMRQKLVDGLKAAGIKQDMSFITQQIGMF
SYSGLSKDQMVRLRSEFGVYGTDTGRMCVAALNSKNIDYVCASIAKVI
>Rfer_0210 ABC transporter related
MNRDLIVDARGIHAWYGSSHVLHGAQLQIARGQTVGLLGRNGMGKSTLIR
TLLGHVAQRDGHITLFGKDASRFKPHKVARLGVAYVPEGRGVFPNLTVRE
NLVMAARRGVDGRNDWSFERVMATFPRLKERLTNLGAQLSGGEQQMLSIG
RALMTHPELIVLDEATEGLAPLIVADIWRVIGEIRKSGIATLIVDRDYRR
VLAHADQALVLQKGQVLLQGTAEDVANDPALSTYLGV
>Rfer_1329 phosphoserine phosphatase SerB
MHPTAIAPGLIIQGFAPPLRLSDFKLIAFDMDSTLINIECVDEIADAVGR
KREVAAITEAAMRGEITDYKESLRQRVALLQGVTEVQMNQIYQERMQFNP
GAAELVAACKAAGLKVLLVSGGFTHFTDRVAQRLGIDYTRSNVLQIENGV
LTGRMVDQPWGDICDGAEKRKMLLETCALLGIAPKQAIAVGDGANDLPMM
REAGLSVAFHAKSAVRELANVSIESGGLDRLLELFQP
>Rfer_0671 Asparagine synthase, glutamine-hydrolyzing
MGNVTRHRGPDDEGMHIDGPCGIAMRRLSIIDLAGGHQPLSNVDETLWVV
CNGEIYNYRELRSELQAKGYHFKTGSDSEVLLHLYEAEGDDFVLRLNGMF
DFALWDVRRHRLLIGRDRLGVKPLYVMQDGQRLAFATEAKALLTLPGVSA
ELNRSAVASYLHLGYVAAPDCIFKGIRKLPPATLLAVENGQVREWRYWRL
SPRMNQDLSEREWIERVRAQLDASVRMQMVSDVPIGAFLSGGVDSSAVVG
FMAKHSQQPIRTYAIGFSGGEAEALYNELPYARRVAELFGTQHREIVVRP
DVVSLLPKLLWHMDEPLSDTAFITTFLVSEFARQDVKVILSGVGGDELFG
GYRRYLGDHYAQQYRRLPGWLRRSAASVAGCLPVDRHSGLLNTLRLAKGF
LSSAEMGADDRYRSYLQVLDREAVSALLMQPDAAQTDPLELAFAGAGHED
PLNRMFAVDAQTQLPDDLLMLTDKMSMAVSLECRVPLLDHQLVELAASMP
AAIKVRGGHLKYVLKEALSDLLPADILERKKRGFGTPMGAWLKNELAPLL
GRLLASDVIQRRGLFRQPVIDRLVADHQANRFDGTDVLLALLNLEIWSRI
YLDHRDPTDVAAELKGYAS
>Rfer_3829 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
MKISFCCTGTEPTPWLAGLRAALPQAQVELWQPGAAPADYAVVWAPPQQF
FDQQPQLKGVFAIGAGVDALLRLRLPPQATVVRLDDAGMAVQMAEYVCHA
VIRHFRELDVYAADISHGQWTFHKPRHRADFPVGVMGLGVLGQRVAQALT
QFEFPVNGWSRSPKVMPGVRGFNGRAQLDAFLASSRILVNLLPLTFDTQG
ILNRDTLSRLQPSGYVINVARGAHLVDDDLLALLDSGHLAGATLDVFRTE
PLPLKHPFWQHPKITITPHTSARTLRETSIAQIAGKLEALERGETVVGRV
DLERGY
>Rfer_0882 thiamine pyrophosphate enzyme-like TPP-binding
MTSSRTGGQILVDQLLVHGVQQLFCVPGESFLAVLDALYDASITVSVCRQ
EGGAAMMAEAQGKLTGRPGICFVTRGPGATNAAAGVHIAHQDSTPLLLFV
GQVAREALGREAFQELDYSAVFGSMAKWVVQIDDARRLPELVSRAFHVAT
SGRPGPVVIALPEDMLREAASVADALPYTVTEIHPGAAQLTELQERLANA
QRPVVILGGSRWSDAAVQQFTRFAEAFSLPVFCSFRRQMLFSANHACYAG
DLGLGANQRLLARIRQSDLILLLGGRMSEVPSQGYELLGIPAPQQDLVHV
HADANELGKLYRAAQSIQATPRAFAQAVCTLRPKAPVAWAAATIDAHEDY
LRWSDPAPIRIPGPLQMGEVMQHLRATLPADTIFCNGAGNFATWVHRFWP
FTSYASQLAPTSGSMGYGLPAGVGAKRLWPQREVVVFAGDGDFMMHGQEF
ATAVQYDLAIIVVLLDNAMFGTIRMHQERNYPGRVSATQLKNPDFCGYAK
VFGGHGERVTTTEEFAPALARARASGKPAILHCLLDAQAITPTSTLDGIR
GAALAAAR
>Rfer_0141 Phosphonate C-P lyase system, PhnK
MSAAPGRPQASSHRSAQHEGTPVIPPVLLSARQVGKAFVHQGQPRWACRG
VSFDLYPGEVLAVVGESGSGKSTLLRLLAARLACDEGSVHYDVRAESPNE
SGSESTGLVDLAELSEARLRWLARTDWGFVEQHARDGLRMNVSGGANVGE
RLMALGARHYGHLRSEASSWMQRVELDAGRMDDLPATYSGGMQQRLQIAR
NLVTHPRLVFMDEPTTGLDVSVQARLLDLLRELVDELQLAAVVVTHDLAV
ARLLAQRMLVMKDGCVVEQGLTDRVLDDPQHPYTQLLVSSVLTP
>Rfer_2970 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
MNYLADILPPLLQGSGITLQVFLITLVLAVPLGLGLALLRISRFRFLSSL
VNGYIWLMRGTPLMLQMLFIYFALPFIPVVGVRLPDFPSAILAFVLNYSA
YFAEIFRAGIQSIDRGQYEGAQVLGLSYPQTMRRIVLPQVLKRILPPMSN
ETITLVKDTSLIYVLAMNDLLRAARGIVQRDFTTMPFVVAAAFYLFMTLV
LTYGFQRLEKKYAVYDD
>Rfer_1700 nitrogen regulatory protein P-II (GlnB, GlnK)
MKQITAIVKPFKLEEVREALAECGVTGLTVTEVKGFGRQKGHTELYRGAE
YVVDFLPKVKVEVVVRTVDVDRCVDAIVKAAHTGKIGDGKIFITAVERVV
RIRTGELDESAI
>Rfer_3846 fumarate lyase
MSTRIEKDFLGEKELPDSAYYGVQTLRGKENFHITGIPMSNEPYFVKAFG
YVKKAAALANRDLGVLDAKIANAIVSACDRLIAGEMCDQFVTDFIQGGAG
TSTNMNANEVIANLALEHLGHKKGEYQYCNPNDHVNFGQSTNDVYPTAFR
LALILRLNSYMDALGQLQEAFFAKGREFQNVLKMGRTHLQDAVPMSLGQE
FHGWGTTMGEEVQRIAEVRQFLHEVNLGATAIGTMVTAAPGYPELAIKYL
SEVTGCTFILAGDLVEATSDTGAYVLLSGVLKRTSSKLTKICNDLRLLAS
GPRCGFNELNLPQMQPGSSIMPGKVNPVIPEVVNQTSFLVIGLDLTVTLA
ASAGQLQLNVMEPVITFALFTSISTMENAVNSLNVNCVQGITANVEHMHS
RVLNSLGIITVLKPSLGYKLCGEIAREGYESGKSLHDIVVKERKLMTQQR
WDEMFSFENLISPKFEQ
>Rfer_3223 ABC transporter related
MSSDVSAAPTASGAAQPDLQATHVTKHYGAFHAVDDLSLEVARGSFFSIL
GPSGCGKTTLLRMIAGFLSPDSGAIQIGGQAMNGVPPNRRPVNMVFQHLA
LFPMMNVGDNVGYGLARRGVAKDEIKRRVGDMLERVSLPGAQDKRVDQLS
GGQKQRVAIARSLVLEPTLLLLDEPLGALDLKLREHMKIELKQLQAAFGT
TFVYITHDQSEALVLSDHVAVMNHGRFEQVGTPQQLYYEPQTPFVAGFVG
ANNRIAGRASDVNGNLVTVTSADGMVVPARAMGQVQLGDAVEAFVRPEVA
RLARQSVTLADAGLPFFSARVASLLFDGANSAVLLHEENSHTEFRIALPQ
TGQFADLAVGERVHFGFDPQRAVCFAPSQAERSA
>Rfer_0888 binding-protein-dependent transport systems inner membrane component
MSASKATPWWLSGPALVLFTALLLVPLLLTTVLSFNAYDPATGVKAGEFT
LEHYAHVFTDDYYYGIFWRTFWISGLVTLICVAVGAPEAYILSRMGKPWR
SILLLVVLAPLLVSVVVRAFGWSMLLGPEGLVNSGLKLVGLGPVRMLYTE
VAVVVALVHVMLPFMVIPVWTSLQKLDPGVENAALSLRASPFTTLRRIVL
PQVLPGILSGSLIVFGLSASAFAIPGLLGGRRLKMVATVVYDEYLHELNW
PLGAAIALTLLVANLVVMLSYNRLVEGRYKKSLG
>Rfer_3230 Extracellular ligand-binding receptor
MNKQWHKKWMGLMVLSGALGSALAQPANPLRIGLIGPLTGPSADFGVPMM
NGAKLALDEINAAGGYLGRPLELVIKDDAGTPDVGLQRSREFLKDQLIAT
IGFCNTGVALKSLEVFQSAKIPLIVPCATGTPITTTYPAPDSYVFRTSAR
DAIQAPFVVDDIVARGWTRVAVFADNTGYGEAGLQDVLKALAAKNLKPVH
VARFELGVKDLQTELKAAQAAGADVIFSYTVGQENAVIARGRQALGWKVP
QVGAWPLSFPFFIDGAREAAEGALMAQTFIAEPSNERRSAFLSAYARKYK
TTKITVPMAAVQAYDSVYLLTYAILAIRNGDLSGPSVKAALETMPRIYYG
VAATHEHPFSKDDKDAISINMLVMGMVKNGAVTFAYPQDRTRNLIVKRKR
>Rfer_3537 ABC transporter related
MDSKKIVLNVNGIEVIYNHVILVLKGVSLNVPEGKIVAILGGNGAGKTTT
LRAISNLLRGERGEVTKGSIELRGERIENLSPSDLVQRGVVQVMEGRHCF
AHLTIEENLLTGSYTRKDKAEVARNLDKVYTYFPRLKTRRTSQAAYTSGG
EQQMCAIGRALMANPSMVLLDEPSMGLAPQIVEEVFEIVKDLNRREKVTF
LLAEQNTNMALKYADYGYIMESGRVVMDGVASDLANNEDVKEFYLGVGGG
ERKSFKDVKSYKRRKRWLA
>Rfer_0440 Tartrate dehydrogenase
MKTYEIACIPGDGIGKEIVPAGQTVLAALAASRNTFKFEFENFGWGGDWY
RRHGEMMPANGLDALRNKDAILFGSAGDPDILDHITLWGLRLKICQGFDQ
YANVRPTRILPGIDAPLKRCTPEDLNWVIVRENSEGEYAGVGGRVHQGHP
LEVATDLSVMTRAGVERIMRYAFKLAQSRPRKLLTVVTKSNAQRHAMVMW
DEIAAQISKEFPDVKWDKELVDAATARMVNRPATLDTLVATNLHADILSD
LAAALAGSLGIAPTGNIDPERRYPSMFEPIHGSAFDIMGKGLANPVGTFW
SCVMLLEHLGEEAAAAQLMAVIEQVTADPALHTRDLGGSATTAEVTQAVC
ARIAA
>Rfer_2240 ribose-phosphate pyrophosphokinase
MSSTPVLLCFGDEQENAARIAQVAGHHLVRIDRHRFPDGELKLRLPPTLP
DHVVILRTLNDPNEKLVELLLTAQTARDLGARHLTLVAPYLGYMRQDVAF
QPGEAISQRIVGRFLAGLFDAVITVDPHLHRVATLQQAVPVANAVVLSAA
PLLSDLIVTQRPKALLLGPDEESAQWLALAASRHGFDYAVCRKVRRGDRA
VDIALPDILVSGRQVVLLDDVVSTGHTLAQATRQLLAAGAASVDVAVTHA
LFVGDAWQMILNAGVREVWSTDCVKHASNAVSMSAPIGEALIRIDAMTMT
R
>Rfer_2424 lipolytic enzyme, G-D-S-L
MLGDSLSAEYGLKRGSGWVALLEQQLKAEKIPASVINASISGDTTSGGRA
RLGSLLTQHRPTHVLIELGGNDALRGLPLELTQDNLTFMTQAAQQAGAKV
LLIGMQIPPNYGKDYGERFAAMFASVAKARRAALVPFLLKGIAEDDATRL
FQADRIHPKEEAHPLMLANVWPELKKIL
>Rfer_3401 Lysine exporter protein (LYSE/YGGA)
MLTLFFSAFVLGLVFNAAPGAVFAETVRQGVRGGFRPALQIQLGSLVGDA
TWAMLGLAGIGLVMQIDMLRLPLGFAGAVYLLYLSWDSWRAAAVEYSINP
GHAPAESPALRKGMALSLANPHNLAYWAAIGGAMGAVGVSDPSTTDYGVF
FAGFMLSSLLWCFVCAAAVDRVFRRAGAQWARFTYRLCAVAMLALALGSL
RDLLHPGHSTSPSSPVGIHHPQ
>Rfer_0683 asparagine synthase
MQLRIIDRQHKEQRISLTTINCHPQMAATDISFASGSPKFADTRLTELAR
TAGAVAAWREAIAKNGPDAALGTSGEFAVGLRLPDGGTFLAVDRFSICTL
CYRVDNGQLRFAARADELADASAEIDPQAIFDYLYFHVIPSPRTIYKGIY
RLPPAHYALFENGQLKVAPYWVPSFAEQRSPSFDALKDEFRQLLQDSVAT
QLDGSKPACFLSGGTDSSTVAGMIALASGRVAATYSIGFDAQGYDEMEYA
RLASRHFKTEHHEYYVTPDDLVRSIPAVAAHYDQPFGNSSALPAYYCARM
AREDGVTKLLAGDGGDELFGGNSRYAKQRVFGWYNHVPGFLQRGLMEPLL
GTRAAATFALTRKAGSYVEQARAPMPDRLQMYNLIMRLGADDVLTPQLMA
QIDTVAPLQLERAVWQMPQNCSHLNRELAYDWRFTLAESDLPKVLGATGC
AGVGVGFPMLDERLLAFSLRLPTAYKLKGLQLRWFFKEALRGFLPDEIIT
KKKQGFGLPFGVWANTDPALKALATDSLHSLARRGVVRADFVQTLLTQHL
PEHPGYFGEMVWILMMLEQWLATKAPQFSLAD
>Rfer_1838 Extracellular ligand-binding receptor
MKFFRTIALSSVALAVASMSMAADNIKIGLQGPLTGGSSPMGVSMRDGAK
LAVTEINAHGGLLGRKIEMIERDDEAKNERGVQIAQELINKEKVVATVGY
INSGVALASQRFYQEAKIPVMNNVATATTITQQFADQPQNYVFRNSANDT
IQSTLIVEEVIGRRKYTKVAILADSTNYGQLGRADLEKALAAKGITPVAT
EKYNIKDVDMTPQLLKAKEAGAQVVITYGIGPELAQIANGMIKLGWKVPM
MGSWTLSMGNFIDNAGKNADDALMPQTFIQEGNTPKRKSFIDAYQKTYKV
TRIPSPVSAAQGYDSIYLLAAAIKQAGSTEGPKVLAALEDLKTPVEGVVT
TYNKPFSKADHEAITLNMPVIGKVQDGHVVYAYEDDKKKGGEVRTKATK
>Rfer_1075 ABC transporter related
MHVRVADRCVCQLSSRQPESNLSVEFILETRGLTKEFKGFVAVNHVDLKV
RRGHIHALIGPNGAGKTTFFNLLTKFLQPTSGSILFNGTDITFEKPAQTA
RRGIVRSFQISAVFPHMTVLENVRAALQRNLGTSFHFWKAESTLLHLHER
ARQLLAEVDLQDFADEMTVNLPYGRKRALELATTLALEPELMLLDEPTQG
MGHEDVDRVTQLIKKVSAGRTILMVEHNMNVVSKIADRITVLQRGAIIAD
GPYAEVSKNPLVIEAYMGTVNTELQGAH
>Rfer_3808 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
MEQVLWFGWFRADIIAEYAVLFWRGLQMTMLVTLICIVQGTALGLAIGMA
RLAEARHAPARQLCKFALRWPATVYVSFFRGTPLFVQILLIHFAVLPLFI
NPADGLLISGETARNLKQNYGAFLSGVIALTLNAGAYISEIFRAGIQSID
RGQVEASRSLGLSFPRTMFHVVLPQAFRRMLPPLGNNAISLLKDSSLISA
IGLAELAYAARTVAGAYSRYWEPYLTISLMYWVLTLGLAYVVKNLEARYG
RGDTR
>Rfer_2388 ABC transporter related
MTFALELKDLRKSFGKTAIIRGINLAVPQGERVGIIGPNGAGKSTLFNLI
SGRFEPTSGDVLLNGQRLNGKKPFEINRMGLSRSFQITNIFPKLSVFENL
RCGVLWSLGYRYTFLKFLADLDDANERADELMKMVKLDKKHDVLAINLTY
AEQRALEIGITIAGGANVILLDEPTAGMSKSETSRFIKLIKEVTVGKTLL
TVEHDMGVVFGLADKIAVVVYGELLAYDTPEAVRANPLVQEAYLGSSVAD
LQAGGHQAC
>Rfer_3726 conserved hypothetical protein
MSNTELSTLLLLCTAASFTPGPNTTLSTALAANLGLRRALRFVVSVPVGW
GLLFSLCAGGVGAMVLALPVLRLAVQALGVAYLLWLAFKLLRTNTLAQAD
TAQLDVTFWQGVMLQFLNIKAWMLALTVVAGWLAGRADLLSRFAVILPLM
LLFGLCSNLTYALVGSLLRQWLADPEHAGRRLRWFNRSMAAVLVATAGWM
STF
>Rfer_0976 Ornithine cyclodeaminase
MWIISEEDARALVSVENAITEVEKAFAAMARGEARNYPVVREVVGYQDAV
FGVKTGCDTRAPILGLKAGGYWPHNLAKSLTNHQSSTLLFDPETGRASAL
VSANYLTGVRTGAASAIATKYLSRPDSSVLGIIGTGAQSAYQLRATLAVR
PIRKVYAWDPSPENLVTFGRTVAELGLEYAPQTERQAVAANADILITVTP
SQQALVEKSWVRVGTHISAMGADTKGKQELDPALVASATLFVDEAQQAIT
IGECQHAYNAGLITDQSFRGSIGEVIAGLCDGRRTAQEITIFDGTGVALQ
DLVVAALAVRLAAERGLGSRVGY
>Rfer_2703 Peptidase M1, alanyl aminopeptidase
MLQLRDSNGPAAVIRRADYSAPAFWIDSVHLTFDLDPAKTRVLNKMTLRR
NPDVSVQPLRLDGESLNLARVLVNGQGASFKLDGGKLVLENLPLEGAFEL
EIFTTCEPLKNTSLSGLYVSNDSFFTQCEAEGFRRITYFLDRPDVMANYT
VTLRADQQKYPVLLSNGNLMDSGALEGTGNEGRHFATWVDPHKKPCYLFA
LVAGQLVCREQRITSRAGKEHLLQVYVRPGDMDKTEHAMHSLMASVVWDE
ARFGLALDLERFMIVATSDFNMGAMENKGLNIFNTKYVLANQATATDADF
SNIESVVGHEYFHNWTGNRITCRDWFQLSLKEGLTVFRDQEFSMDLCADA
SARAVKRIEDVRVLRTAQFPEDAGPMAHPVRPDSYIEINNFYTVTIYEKG
AEVVRMMQTLVGRAGFAKGISLYFARHDGSAVTCDDFAQAIADANPDSAL
SKLLPQFKRWYSQAGTPRLQAKGSYDAAAQTYTLNLSQSCAATPGQEAKE
PFVIPVSLGLVGSSGADLPLQLQDGSTSERGSRLLVMTQADESITFVNVA
EEPVPSILRGFSAPVLLDFDYSDAQLLTLLAFDPDPFNRWEAGQRLALRS
AIQLIADDALLTGATPLNDAYIEAMRSVLRHPALDAAFKELVLTLPSEIY
IAEQLEVADPQRIHAVREAMRAQLASALAADWQWAFEAHAPNGAYRPDTV
SSGRRALTGLALTQLCLAARDSGDSVWPGKAYQRFKDADNMTDRFNALTA
LVNSGHALATPALAQFHTLFKNEELVLDKWFALQAGSCDRGGQVLPAVRQ
LLKHPDFNLRNPNRARSVIFSYCSANPGAFHRADAAGYVFWSERVLELDR
INPQVAARLARALDRWKKLAEPYRSSARQAIERVADKLELSNDVREVVSR
ALAD
>Rfer_0965 extracellular solute-binding protein, family 3
MKFRLLALAALSAITALTGASVNAAGTSKLDQVLARGKLIVGTGSTNAPW
HFKSADNKLQGFDIDIAKIISKALFDNPDKIEFVNQSSDARIPNITTDKV
DITCQFLTVTGGRAQQVAFTIPYFREGVGLMTKTGSKRGDYAALKAAGAS
VNVAVLQNVYAESMVHAALPMAKVAQYDSPDLMYQALNSGRADAAATDQS
SISWFIKQNPGKYKDAGYGWNPQTYACAVKRGDQDWLNFVNTALHEAMTG
VEFDAYAASYKTWFGVDLAPPKIGFPVEYK
>Rfer_1793 3-isopropylmalate dehydrogenase
MKIAVLPGDGIGTEIVAEAVKVLNALDLKLEMETALVGGAAYEAFGHPLP
DATLKLAKEADAVLFGAVGDWKYDKLDRPLRPEQAILGLRKNLGLFANFR
PAICYEQLVDASSLKPELIAGLDILIIRELTGDIYFGQPRGRRTATDGHF
PGAEEAFDTMRYSRPEIERIAHVAFQAARKRSKRVTSVDKANVLETFQFW
RDVLTEVGQQYPDVELDHMYVDNAAMQLVRAPKKFDVVVTGNLFGDILSD
EAAMLTGSIGMLPSASLNASSQGLYEPSHGSAPDIAGKGVANPLATILSA
AMMLRFSLNQEVAAQRIEAAVKDVLVQGLRTADIFSTGTTRVSTVEMGAA
VVKALK
>Rfer_3891 Protein of unknown function DUF160
MLQRVDFNPAKKLLSREALDAYDPQSESWQKQFARRYTHHAELDGVLNNI
ENVNETVYKKFAIAITPYMAKLMDRDDPNCPIRLQYLPSHFEETKPGFAT
SLDQLGEEGDTVPGTSVVHRYPRRVLFLVSNTCATLCRFCTRKRMVSQPD
GSVAKDEIEASIDYIAGNQDIEDVLLSGGDPFTFTDERLDYILGELRRRA
PHVRFLRIGSRMVVQMPTRVTPELCAVLEKHRVQMVNIHINHPKEITPLL
RERVKMIQKAGIMMGLQTVCLKGVNDDVAVMRELFMQTIEMGVRPYYVYS
TDMVEGAHHFIVPHRRMLELYEGLRGWISGPAIPTFVVDGLGGLGKLPIT
PSYVREEELPDGSGTTVKCRNYKGMTIEMPGLGQDFHLPSRTN
>Rfer_0086 peptidase M24
MTATPLAKTADTGYAQRRAQVAKLIGPHGIAIIPTAPEQQRNRDNDFLFR
PDSYFYYLTGFTEPKAWLVITGDGKTSLFCQAKDQEREIWDGYRLGPQAA
PAALGVDAAFAVADLDAQLPGLLDGRDAVWYPFATHKGLETRIDGWLGSV
RARVRYGTLCPEQQRDLCGLLDEMRLVKDAHEQATMRRAAQISAGAHIRA
MQLSARMLRGGQEVREYHLDAELLHEFRRHGSQSPAYGSIVAAGANACVL
HYRADAGQVRAGELVLIDAACELDGYASDITRTFPANGKFSGPQRALYEL
VLAAQEAAVAATRAGARFTDPHEASVKVLAQGMLDLGLLERNKVGSLEDV
IDKRAYFQFYMHRTGHWIGMDVHDCGAYTEPSEIGQVSTRKDALTGDLIK
DRPARILQPGMVLTIEPGIYVRPAAGVPAQFHNIGIRIEDDAIVTASGCE
LISRGVPVQADDIEALMRG
>Rfer_1030 ABC transporter related
MENVHKRFGQNHVLNGVSLEIERGQVVAIIGRSGSGKSTLLRCLNGLEKI
DSGSIRVCETELNGLASKDLLRLRQRVGIVFQGYNLFPHLTVKRNVTLAL
TNIKKMSLAEANAIASKVLQQVGMAEKLEAYPEMLSGGQQQRVAIARSLA
MMPELILFDEVTSALDPELTGEVLRTMENLAREGMTMTLVTHEMAFAKKV
ADVLVFMHAGKVWEIGSPKELFAHPKTEELNRFINSEIK
>Rfer_2868 ABC transporter related
MSGRVGEVRSLQPVFELSGASVHFGRAASPVRALSDVTMTVAPGERVALV
GANGCGKSTLLRLLHGLALPTSGQLVSDPAWRQAMLFQKPHLMRLTVQAN
IALGLWLRGTPWGEAKVLALAALARVGLTELAQRNARQLSGGQQQRVAMA
RAWALRPQVLLLDEPTASLDPHAKREVEALIEEFSSGPDAMTLIFASHNL
GQVKRLASRVIYLEHGRVLADLPVADFFGGSMLQQQYPAAHLFVKGELV
>Rfer_2531 transglutaminase-like
MLNLLHHLRQLPRDSRDTLFLLGVIAWVVLPQVSHLPLWCSLLSGAVMLW
RGWLAVTLRPLPARWWLWLLLVLTVGATLFTHKTLLGRDAGLTLIVVLLA
LKTLELRARRDAFVVFFLSFFMMLSNFFFSQSLLTAGAMLIALLGLLTAL
VNAHMPVGKPPLLQAARIAGSMTLLGAPIMVLLFLLFPRLAPLWGVPSDA
MSGRSGLSATMQVGTIASLALDDSIAMRIRFEGAPPRQSDLYFRGPVLSS
FDGRSWQPLRSGLPARMRPLPNLQVQGAPINYQVTLEPNQRPWLLLLDAT
PNAPLLTGFEARMTPELQWLVERPITDLLRYTARSYPDFSHGPLRPVAGL
QDYLELPFGFNPRTLQLAAELRRDPRYAADDGTQLIAAVLERLRSGGYVY
TLDPGAYGRDSADEFWFDRKEGFCEHIASSFVILLRALKLPARVVTGYQG
GEQNPVDGFWTVRQSDAHAWAEVWLNGRGWVRVDPTAAVAPGRVGSLQRL
QAPRGVITEALLGNVNPALALNLRAVWDAVNNRWNQSVLNYTQRKQLNLL
KNLGFESPSWEDLIYLLIGIVVLASLGGAAWTLWDRLRQDPWLRLLAQAA
KRLQKAGVQLAPNSPPRRMAEQLSAQLGPEHPAARRIGDWLLRLEALRYA
PPAARRSRLATLQHEFKRLHWPT
>Rfer_0238 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
MTMFLEQIHGIAQYYPVILKGIGVTLALSFIGIVAGTLIGFVLGIGRASS
HKLLSLVVGAYTDIFRGTPVLVQVFVVFFILPEAGIELDSFTAGALALSN
IAACFISEIVASGIRAVPIGQVEAAASAGLTRLQQLRLVVMPQATRMIVP
SLVGQFVLLVKDSSVVSAIGLLDLTRSGWIIVQSVPNGMLVFSVVGIGYF
LICYPLLHLSRRMEKT
>Rfer_2297 tRNA synthetase, class II (G, H, P and S)
MSAWVLPDHIADVLPSEARHIEELRRSLLDTARCYGYELVMPPLLEHLES
LLTGAGAALDLQTFKLVDQLSGRMMGLRADSTPQVARIDAHLLNRPGVTR
LCYCGPVLHTRPGAPHASREPLQFGAEIYGHAGLEADLEILMLALDCLKV
VKVASPSVDLADARIVHALLKGVPVEIALAEQIYAALAAKDASELAVLTK
KFPSSSRQGLLALVQLYGDEKVLLEAEKALQPLPAITESLSNLKWLASQL
DGAKVSFDLADLRGYAYYTGTRFSIYAAGASDALVRGGRYDEVGAVFGRN
RPAAGFSLDVKALVGVLPARPLRAAIRAPWREAADLRVAIASLRAQGETV
VCVLPGHESEVDEFRCDRELVPRNGQWIVASI
>Rfer_2658 Glycine hydroxymethyltransferase
MYNRNILIEQTDPEIFAAIAAENARQEQHIELIASENYASPAVMAAQGTQ
LTNKYAEGYPGKRYYGGCEFVDIAEQLAIDRVKQIFGADAANVQPHCGAS
ANEAVFLAFLKPGDTIMGMSLAEGGHLTHGMALNMSGKWFNVVSYGLNDK
EEIDYDAMERKAHESKPKLIIAGASAYSLRIDFARFAKVAKDVGAIFMVD
MAHYAGLIAAGIYPNPVPHADVVTSTTHKSLRGPRGGIILMKAQHEKAIN
SAIFPGLQGGPLMHVIAAKAVAFKEALQPEFKVYQQQVLTNARVVAETLV
SRGLRIVSGRTESHVMLVDLRSKSITGKEAEAVLGSAHMTINKNAIPNDP
EKPMVTSGVRIGTPAMTTRGFKDEEARITANLIADVLDNPRDSANIDAVR
AKVNALTKRFPVYG
>Rfer_0269 Extracellular ligand-binding receptor
MKAFKTLIATAAAALVTGSALADITIGISLPLSGPASGLGIPMGNQIKLW
PTSIAGEKLKVIVLDDATDPTNGVKNAKRFVTEDKADIIMGSAATPVAIP
MAAVAAEAETVQIAFSPAVLPPGKDAWTFRLPQSNDVMAHAMVALMKKQG
VKTVGFLGYTDAYGESWLKEFTAQANANGIKLIGTERFARSDTSVTAQAL
KLVAANPDAMLIVASGSGAAMPHMAVVDRGYKGKIYQTHAAASRDLMRVG
GKAVEGAYVVSGPAVIAEQLPDSHPSKKVAIDFVQQYEKAYGPGSRNQFA
GHSYDAVLILEKVVPVALKKGKPGTKEFRAALRDAMETMGRTVVSHGVLN
WTHDNHWGFTNETGVMLKVVNGDWKVE
>Rfer_0267 ABC transporter related
MSFTTQLQHWAHNAKIQRVVVVACMLLYAVSPVPEFWITQLNYIALYSLV
ILGLVLLTGIGGLTSFGQAAFVGIGAYTSAYLTVHMGWSPWLTVFAGLFI
TGISALVVGWITLRMSGHYLPLATIAWGLSLYYLMGNLDALGKYDGILGV
PALTVWGWDISQGRSFFVLAWGMVLFAAFALLNLMDSRTGRAIKAMRAST
LMAEAMGVDTLRHKVGIFLIAALFASLSGWLFAHFQRTVNPSPFGLKMGI
EYLFMTVLGGAGYVWGAISGAVMTKLLEDELQVLLPKLLGTSGSYEVIVF
GIVLVLVLKYLPDGVWSLVGRFLPKPNRVEDWHAAAALPERAKPALGDTV
LEVKDIRKQFGGLTAVNNIGFSIQAGQIVGLIGPNGAGKSTTFNLITGVL
GLSSGEVKFRGQTISGLPSREIARRGMSRTFQHVKMIPEMTVLENVALGA
QLRGSKGALSSMLRLDRAEEQSLLREAARQLERIGMGHAMHELAGNLAMG
PQRLLEIARALCSDPALLLLDEPAAGLRHKEKQALAAVLRQLRSEGMSIL
LVEHDMDLVMDVTDHIVVMEFGTLLMQGTPEEVQQSPKVRAAYLGVEH
>Rfer_0161 extracellular solute-binding protein, family 3
MKFKLLSTLAGVFASAVLSLATPAHAADDSLSSILAKKSIALGVASDFPP
YGYMGPDFKLTGVDVATAQLIADKLGVKAELVPVSTPNRIPYLQTKKIDL
IVSALGKNPEREKVIDFTVAYAPFFQAVFGPKALSIKSFDDLAGKSIAVT
RGTIQDDVLQKVAPPTLKIQRFEDDATTVAAFISQQTQLLATGAAVAAAA
VQKNPQVQAEYKLLLKDSPNFIGVRKGETALMTKVNEILLAAKADGTLEK
YSQKWLGRGTGVLPE
>Rfer_1105 phospholipase/Carboxylesterase
MDEIVTKIFSLVTLTTVTFLLGGCAMSEPWTLAEGQHPQSLEKQMSDTVG
TPFLLYLPEGYNKIDGKKWPLIVFLHGSGERGDDIEKVKAHGPPKMLETQ
KDFPFIVVSPQAAAHTNWNSNSLTVLLDEVIARLPVDVDRIYLTGLSRGG
HGTWKMAADHPERFAAIAPVCGAGDVKSACQLKNIPIWAFHGEKDTVVSL
QDDAAMVAAVKACGGDVKFTVYPGVGHDSWTQTYANPALYEWFLQHKRKP
VEP
>Rfer_4015 Glyoxalase/bleomycin resistance protein/dioxygenase
MFSHVMVGVNDLEVSKKFYDALLGTLGIGPGVANKSRYFYRSPAGTFGIT
TPINGQPATHGNGSTLGFAAQSPEQCDAFHAAGIANGGTTCEEPPGFRDG
AVGKLYLAYLRDPDGNKICALHRPAK
>Rfer_2099 major facilitator superfamily MFS_1
MTITTQKISATQMLLCGAAIVTLSMGIRHGFGLWLQPITQSQNWSRETFA
FAIAIQNLVWGFTGIFAGMLADRFGAFKVIVAGAVLYALGLVGMATATTP
LIFALTAGVLIGMAQAGTTYAVIYGVIGRNIAPHKRSWAMGVAAAAGSFG
QFLMVPTEGLLISSVGWQEALMVLGAASLMMVPLAWGLHEPALAGSFAVR
REQSILQALGEAFKYPSFQLLMAGYFVCGFQVVFIGVHMPSYLRDKGLSP
QVASYALALIGLFNVFGTYAAGVLGQRMQKKNILAFIYLARAFAISIFLL
VPLSPVSVYIFSSVMGLLWLSTVPPTNATVAQIFGVTHLSMLSGFVFFSH
QIGSFMGVWLGGYLYDRTGSYDLVWYIAIGLGVLAALVNLPIKEASIVRS
QAMQGT
>Rfer_2862 AzlC-like
MFGSATHLNCSSFMPTASVPSHGPQPPRISVLSLSIPVAMGYVPLGMVFG
FLFVQAGASWWLALLASIVVFAGAAQFMMIPMLGLGLPVASIALATLVVN
LRHVFYGLSLLDRLPAQPWARWYLVFALTDETYSVLTTLPPGTSTRQMVT
VALLNQGWWVLGTLLGALIGTQAQVPLLGLDFALAALFAVLAVEQWRSAD
TPAPLWVAVLSYAVAQAVAPQQALLIAIGLSVLAGLVWPQRSPRETAP
>Rfer_3367 phospho-2-dehydro-3-deoxyheptonate aldolase
MTAKSIAASTDAWYANVVANATDRTGQTDNERIKDITVLPPPEHLIRFFP
IHGTAVESLISSTRRRIHNIMAGKDDRLLVVIGPCSIHNPAAALDYARQL
QVQREKYADTLEIVMRVYFEKPRTTVGWKGLINDPYLDETFRIDEGLRIA
RQLLIEINRLGLPAGSEFLDVISPQYLGDLISWGAIGARTTESQVHRELA
SGLSAPIGFKNGTDGNIRIATDAIQAAAGAHHFLSVHKNGQVAIVQTKGN
KDCHVILRGGKAPNYDAASVAAACKDLEKAKLPATLMVDCSHANSSKQHE
KQLDVARDIAAQLASGSRSVFGVMVESHLIAGAQKFTPGKDDLSKLEYGK
SITDACLGWDDSVELLEVLAAAVKARRAG
>Rfer_0126 Allophanate hydrolase
MAIKVLQPGLATTVQDAGRIGYYHLGIPLSGALDQYSFRAANLLVGNSED
AATLEITMLGPKLEFMHDAAIALTGANLPAKLDGVPIPNNQVVAVKAGSV
LSFDFLKDGVRAYLAVAGGIDVPEVLGSRSTYTLGAIGGFCGRKLQAGDV
LPVGAFQGPSHVGKKLPDHLKQALPKQVQVRVLPGLYFHWLTQASGKSFF
EDTWQVGPEADRIGYRFKHGRPLEFEPRERPFGAGSDPSNIVDAGYPIGS
IQVPGGLEPIVLHRDAVSGGGYAMIGTVISADMDVVAQLQPNFQTQFVAV
DMAQALSARAKRNQRLADLRQALLN
>Rfer_2498 transglutaminase-like
MKLSVTHETRYDYAPAVGTAQHMAYLQPLNTRSQRLLEHTLQIDPIPAKI
SRTQDVFGNTRCYFSLQTPHTTLTVVAHSVVETIDSSPPASSISWEQTRE
LFRYRSGGRFDAATEFVFASPFVPRHSEFAAYARPSFATGSCVLTAARDL
MQRIHSDFAYESQSTQVNTPAIEALAQRKGVCQDFAHIMIACLRAMGLAA
RYVSGYLLTQPAPGTVKLKGSDASHAWVSVYVPDLPEGARWFDLDPTNNR
SGWHSPGADYVTLALGRDFSDVSPIRGVIHGGANHTLSVGVTVESVASDD
QANQATGQTQKQEQTQLQGQQQSPSHDATN
>Rfer_1952 binding-protein-dependent transport systems inner membrane component
MMSTSLTSLQIDEALEPPHPLREFWRYFSSNKGAVGGLVIVVLVLLIAMF
APLIAPYAPDLTDPNVFLKPPAWQTEGSSAHWLGTDAIGRDILSRLIFGA
RLSLAIGLAVVTLSVITGTILGLTAGYFRGIFEVAVMRLMDIILTLPSLL
LAIVIVAILGPGLMNAMLAVAVVVLPHYVRITRAAVISEASKDYVTAARM
NGAGHLRLMFNEILPNCTAPLIVQASLGISAAILDAAALGFLGLGAQPPS
PEWGTMLADAREFVLRAWWVVTFPGLAILITVLAFNLLGDGLRDAFDPKL
KR
>Rfer_0434 major facilitator superfamily MFS_1
MPLSVSASPADGGNDASGQSHVRIHVGLRGGHVIQPVLSLPRSARLATNV
HFFLNGLAFATWGVHVPTFKHLHGLSEAEVALAMLAAGVGALVAVLWAGA
LVGRFGARAVCAVSGLMTAAAVGALLQLPSYWTGVMGLFVFGVANSLFDV
AMNAHAVEVEAAYGRPIMSSCHGFFSLGGLGGAALASLLAVAGVAATTHT
LWVAIGAAALTIAVVPAMLPDRAQTSDETGYSFMRPRGVIVLLGAMAALG
LVAEGAMYDWSVLYLRESLASPQALAALAYASFSVAMAIGRFAGDRARAR
LGALTLLSVGGTLAASAMLAVLLIGHPVAALAGFALVGLGISNVVPVLFS
CASRVPGISPAHGISGVASLGYLGFLSGPPIIGAVAQVATLPVALCLVAL
FAAALAVLARRVLPIMGELGTSTDDKASRSVPVGQEPRQHG
>Rfer_2167 major facilitator superfamily MFS_1
MSLAPAHLPAPRFALARLIAGQICLHACMAGMRMAAPLLALRAGYSAMAV
GFLLALFALTQVFLALPAGRYVDRHGLKRPVGFCVVAAALGAALAVAFPV
FPVLCLSALMTGGSTGVAVISLQRHVGRAAQNATELKKVFSWLAIGPAVS
NFVGPLTAGLLIDYSGFRAAFLLMALLPLATWFWVRRTVELPPVAVVQGA
APNKAWDLLREPLMRRLILVNWLLSSCWDVHTFVVPILGHERGLSASVIG
MILGAFAIAAAFVRVLLPVFASHVHEWFVVTSAMVMTAVLFGVYPLMTTP
LAMGACSVLLGLALGSVQPMIMSTLHQITPEARHGEALGLRLMTINASSV
MMPMLFGTAGAVVGVSVVFWIVGLAVGVGARTAWRLKPVSSLTASPGTTE
TSE
>Rfer_3782 SSS sodium solute transporter superfamily
MTRLSQFKGAIALFSLLALSAGAYAAGADLGQAVKQTTNWTAIGMFATFV
ILTLGITKWAASRTKSASDFYTAGGGITGFQNGLAIAGDYMSAASFLGIS
GLVFANGFDGLIFSIGWLVGWPIITFLMAERLRNLGKFTFADVAGYRFSQ
TPIRIFAACGSLVVVAFYMIAQMVGAGQLIKLLFGLEYLYAEILVGSIMM
MYVLFGGMTATTWVQIIKACMLLGGATFMAFSVLLQFGFSPEMMFEKAIE
VHSKKDAIMAPGGLIKDPISAISVGMALMFGTAGLPHILMRFFTVPSAKE
ARKSVGWATTWIGYFYILTFIIGFGAITNLIPNPMDYFVGGDISKGLNGG
GNMAAVHLSKAVGGNVFMGFISAVAFATILAVVAGLTLSGASAVSHDLYA
SVWRKGRVDQADELRVSKITTVALGIIAVTLGIAFEKENVAYMVMLAFVI
AASANFPVLFMSVLWKDCTTKGAVAGGFVGLIMAVVLTILSPSVWVAVMH
HPAGSAWFPYDSAAIFSIPAAFLTIWLVSTFDRSARAAVDRAGYPAQEVR
SETGIGSASASGH
>Rfer_0983 binding-protein-dependent transport systems inner membrane component
MNPSSSSTRIVRRVLAHPSIVIGGGLVLAVAAVALLAGVVSPYDPLASNF
RMKLQTPSAEHWFGTDHFGRDVLSRVIYGGRLSLQIGLMVVLITGLFGTL
IGSVAGYFRRLDDPIMRLMDALMAFPAILLALTVSATLGASVQNVIIALS
IATTPHTARIVRSSVLVVREMQYVEAARALGAGDWRILWFHVLANSLAPL
IVRLTFVFASAILAEAVLSYIGVGPPPPTPSFGNIIANGRDFMVEAPWVT
IFPGLAIVVCVLGLNLLGDGLRDLLDPRIKVGP
>Rfer_1911 aminotransferase, class I and II
MKCGQIISSAPRNPIGEPVKTIRKSAKLANVCYDIRGPIMDAARQMEEEG
HKIIKLNIGNLAVFGFDAPEEIQQDMIRNLPNSAGYSDSKGIFAARKAVM
HETQKQGIKGVTLDDIYLGNGASELIVMATNTLLDIGDELLLPSPDYPLW
TAAASLSGGTPVHYMCDEARGWMPDLDDIRAKITPRTKGIVVINPNNPTG
ALYSDELLKAIVQIAREHGLVIFADEVYDKVLYDGVRHTAIGSLSDDVLT
LTFNSLSKSYRSCGYRAGWMIVSGDKKPALDYIEGLNMLSNMRLCSNVPG
QWAIQTALGGYQSINDLVCEGGRLRRQRDLAYELITAIPGVTCVKPSAAL
YMFPRLDPTLYPIADDQQFFLELLQETRVMLVQGTGFNWPAPDHFRIVFL
PHEDDLREAIGRVAKFLEAYRKRHSN
>Rfer_2246 protein of unknown function DUF6, transmembrane
MRAHDDRALIRAMPAVFVLIWSTGFIVARYGMPHAPPLKFLVVRYALSIA
CFLPWIVLARVKWPSHRAQWTHLAVTGIFMHAGYLGGVWAAVKLGMGSGL
SSLIVGLQPVLTALWLAAMGGKIAARQWAGLVLGFVGLVLVVSRKFGQGG
EADWVNMSLAIGALLSITTGTLYQKRFVTSCDVRTANTVQLGAALLVTLP
LALLEVEVMHWNVELVGAVAWSVIALTLGGSSLLYLLIQRGAAASVTSLM
YLVPPVTALIAWMLFGESITVLTVIGTLLTAFGVALVVRQPRLVVPVGPD
>Rfer_2116 Leucyl aminopeptidase
MNFELETLDLNGAAKEKCDALIVLLATSFKPGKDNLSILVAQALKAGDLE
SQSGKALVLYRPTGLACARAVLANVGEGSANEVSKAVKAAVLAVKAGNVK
KLVICFAALPQEAPLRAAVTAAAEASYVFTTTKSKPEGRVIQRVVVAVSN
SSGFKPVFDRAVAAVTGIEFAKEWANRPANHATPALLAGAARSLAKLANI
KCEVLGPKQVERLGMGAFMAVAQGSEEPLRFIVLRYDGAQKSAAPTVLLG
KGITFDSGGISIKPAADMDEMKFDMSGAASVLGVFLALAQLKPAINVIGL
IPSCENLLDGRSVKPGDVVTSMSGQTIEILNTDAEGRLVLCDALTYAERF
KPRAVVDIATLTGACVIALGGVRSGLFSADDQLAAALVSAGESSLDLCWR
LPLDDDYAEGLKTSFADVANVAGRAGGAITAAKFLQRFAGKFPWAHLDIA
GTAWKSGTAKGATGRPVALLLEYLLTSAK
>Rfer_2060 6-phosphogluconate dehydratase
MKLNQTVEAVTQRIRQRSQPTRSAYLERLALTAQRKPGAQRLGCANVAHA
FAALPINDKFRVVAERAPNIGIVNAYNDILSAHAPMQHYPEIIKVEARRL
GATAQVAGGVPAMCDGVTQGTPGMELSLFSRDVIAMATAVSLSHDVFDAA
LMIGVCDKIVPGLLIGALHFGHLPTVFVPAGPMTSGLSNNEKSKVREKAA
QGLVGRPELLEAESKAYHGAGTCTFYGTANSNQMLLEAMGLHVPGTAFVN
PGNTIRDELTREAVRTVLDITKARRFAPIGEVVDERCIVNAMVALLATGG
STNHLIHWVAVARAAGIVIDWDDFSELSEVVPLLTRVYPNGSADVNQFQA
AGGPGFVIRELLDAGLMHADVLTVRAGGLREYTGIPAGTPDGQGALHWVD
AGASKDDSVVRPASAPFSPHGGLMLLKGNLGRSVIKVSAVPDDRHVVEAP
CRVFDSQEALHAAFGAGELDRMCLENAAGGVVCVVRWQGPHANGMPELHK
LTPPLAVLQGKGFKVALVTDGRMSGASGKVPAAIHVSPEAAAGGPLAKVR
DGDVIRLDATTGTLEVLVAADAWAARTLDDMPEALRHANGIGMGRELFAG
MRRNALSAEHGACTWS
>Rfer_0314 major facilitator superfamily MFS_1
MFHSVRRPDLLIIVLASAGILMVTMGIRQSFGLFVSPVNTSTGLGVVTIS
FALAIGQFTWGAVQPVAGAIADHYGPRPVLIAGLVILALGCLITPFVSSG
FGLAASLGLLASVGSGMGSFSVLIGAAARRLPVESRGAASGIINAGGSFG
QFVFAPLLQKLIQSIGWMGAIGSMAIVALAAIPLVSRVTGTQPALDAHGV
HNGGLKRAILDALKNPSYLLLHAGFFTCGFHIAFLVTHLPGEVGLCGLPP
NVASWSLALIGIANILGSLIAGSFVAKYRSKYILSVMYGSRTLLILGYLM
MPKVEWTYYLFAIGLGLTWLATVPPTAAIVGKLFGTRYLATLFGLTLLSH
QIGGFLGAWLGGISMSQFGDFTWMWYADMVLAALAALLNLPIREERVKRL
VTA
>Rfer_3377 ABC transporter related
MSMLNVKNINQYYGGSHILRDVSLQATRGQVTVILGRNGVGKTTLLKSLM
GLVAIKTGSIELDGQPIHSATPYERARAGIGFVPQGREIFARLTVEENLR
MGLAYKPANTPIPPELFDLFPVLKQMLQRRGGDLSGGQQQQLAIARALAA
SPKLLILDEPTEGIQPSIIKDIGRVIRMLADRGDMAIVLVEQYYDFAQAL
ADDYVVMERGAVLARGKGPNMEIDGVRQLVAI
>Rfer_2926 3-dehydroquinate synthase
MNATDLQTVAIDLQSRSYHIAIRGSLFDNPLSYTELPAASSALIVTNTTV
GPLYAERLQSALLGKFKHIHTVVLPDGEAFKTWQTLNLIFDALLSHGCDR
KTILFALGGGVVGDMTGFAAASYMRGVPFVQVPTTLLAQVDSSVGGKTGI
NHPLGKNMIGAFYQPLKVVCDLDTLKTLPARELSAGLAEVIKYGPIADLE
FLAWIEAHIDALMAREPQALAHAVKRSCEIKAWVVGQDEREAGLRAILNF
GHTFGHAIEAGLGYGEWLHGEAVGCGMVMAAHLSLRLGLIDAALVQRLTT
LIQKAGLPVKGPQLSASDNAGRYLELMRLDKKAEGGEIKFVVIDGPGNAS
VRSAPDALVREVIHDCCT
>Rfer_4176 major facilitator superfamily MFS_1
MIWLATSLLAHDIACGRIVSPFFERLILKNNWLMLAVTLAIQAMVSMALL
TLPVMAPVVAGALGVSSVYVGVYVAIVYVGAILASLAAGTVVARYGAIRV
SQAGLLTCALGLALCTVNSVPVIALGALLIGIGYGPVTPASSHLLARTTP
ARSLSLVFSLKQTGVPLGGVLAGLIVPSLLLVTGWQGALLLVSLLCLVCA
VIAQPMRQEMDLDRNPKCPLSLSNLAQPLRLVLSHRALAMLATCSFFFSA
TQLSLVTYLVTFLHDSLGQGLVAAGMALSVSQLAGVGGRVFWGYVSDRFL
GARRMLAVLAALMALSSVATASLSTSMPTVLLLGILAVFGASAIGWNGVY
LAEVARQAPKGQASLATGGTLAVTFLGVVLGPPLFGAMSGLFGGYRAGYA
ALALPTLACCVLLVRQKKTLLAAKG
>Rfer_3019 glycine cleavage system T protein
MAWTAVEAMEFDMPLFLYWSSLMTTALESLLKTPLNDLHVSLGARMVPFA
GYSMPVQYPAGLMFEHKHTRTAAGLFDVSHMGQLRLVGPDAGAALESLIP
VDVIDLPVGKQRYGLLLNDEGGIIDDLMFVNRGSDIFVIVNGACKAGDIA
HIQAKIGTRCKVIPMPERALLALQGPLAVTALSRLAPGVEKLVFMTGGNF
TIQAGNQRIDVFLTRSGYTGEDGFEISVLDSQAQALAQALLAQPEVKPIG
LGARNSLRLEAGLPLYGNDIDTTTTPVEASLQWAMQKVRRAGGARAGGFP
GAAKILAQLEGGTGAAARKRVGLLALERIPVREHIELQDLNGQHIGEVTS
GLLGPTIDQPIAMGYVPTALAALGTRINAIVRGKPVPMEVVAMPFVPTNY
FRG
>Rfer_2589 Extracellular ligand-binding receptor
MMKNTCKSIGLAALVACGLGLSTAQADELLVGVELPLTGTLARVGAGMHE
GIMVAADVFNKTNSKHKIKIITVDNESAPAKAIAAVEKLASQGVVAIDGG
YGSNNIAPASDAASKLGLVYVTSGGVDDSLVNSGRKNFFRINNSAGYQKA
MVGLLGDLNVKSVSILYSTKEATAGLASDLQKSLTAKGVTVVAHAFDPAM
TDFKPIINKVKLQDKSEVIAMIGYENDYVGILRAARVLKPNVKAMVGVWS
LATPKMAADFPDLMPNVYGTAVLPFPAEFKTAEGKSFNDTYQRLYKKEPD
YLGQFGYVQSMLLFDAIARAADKGTLKKDGVAEEMRKTDSETLIGRVQFS
SNGDNVNFSHRMGQHQGKKIVIVWPKADATGKANFPGVPW
>Rfer_0516 major facilitator superfamily MFS_1
MTSSASNTPQIKPAWIDTFKVYLEPPTLRMLLLGFSAGLPLLLVLGTLSF
WLREAGLDRTTIGYLSWVGLAYAFKWVWAPLVDRMPIPLLTRWMGRRRSW
LLLAQLAVMAGLVAMSFNDPRVALQPVVWGALAVAFGSATQDIALDAFRI
ESANINRQAALAAAYQTGYRLAMIWAGAGVLWVAARAEVAGVAGYQHGAW
QTAYLVMAASMLLGVLTVLLSPEPLRRAMPSAKNAREWLRGALIEPFADF
LHRYGKQALLILALIAIYRISDVVMGIMANPFYVDMGYTKDEVAAVTKIF
GVIMTLVGAFVGGVLSMRFGVMRVLMLGAVLSAATNLLFAALSTRGHDLT
ALIFVISADNLASGIASAAFIAYLSSLTNINYSATQYALFSSMMLLAPKF
LAGYSGRYVDAFGYQNFFIGTSLLGLPVLLLVWLASRARQA
>Rfer_3244 ABC transporter related
MLELRHISQNYGDRVLLQDINLQVAAGEIVALLGPSGSGKSTLLSIVAGL
QPPLKGSVWFDGQDITRVPPERRHFALMFQDFALFAHLNVLDNVAFGLVE
QRLAKSDARARAARMLERFGLLDHARHKVWTLSGGEQQRVALARALITNP
RALLLDEPFSALDAELRQGLREEFCRHIAAAGMATLLVTHDEAEARAMAA
RGVRLVDGQLRAAW
>Rfer_3104 binding-protein-dependent transport systems inner membrane component
MLNYFLKRLLGLTPTLLIVAVLVFLFVHMLPGDPARLAAGQDADQQTVEL
VRQELGLDRPLPEQFVSYFAHVVKADFGTSLRTRRPVSTEIAERFMPTLL
LTLSSMVWAVIFGMTIGITSAVYRNEWPDRLGMTIAVSGISFPAFALGML
LMQVFSVQLGWFPTVGADSWRHYILPSLTLGAAVAAVMARFTRASFVEVI
QEDFVRTARAKGLKERTVIFKHCLRNALIPVVTMMGLQFGFLLGGSIVVE
AVFNWPGLGRLLVDAVTMRDYPVIQALVLLFSMEFILINLIVDVLYGFIN
PTIRYK
>Rfer_3323 acetolactate synthase, small subunit
MKHIIAVLLENEPGALSRVVGLFSARGYNIESLTVAPTEDASLSRMTIQT
AGSDEVIEQITKHLNRLIEVVKVVDLTEGAYTERELMMVKVRAVGKEREE
MKRMADIFRGRIIDVTEKSYTIELTGDQTKNDAFLLAIERGAILETVRTG
SSGIGRGERILRV
>Rfer_2810 Extracellular ligand-binding receptor
MKLKTTFLPLFGALAVAFASHAYAQEQKVVIGLTGPLSGANAFAGKDNEN
GVRLAIEDLNSKKITVGGKMLKFELQSEDDQCDPRAGVMVAQKLVDSGVK
FVMGPYCSGVAVPASRLYSQGGAMLSTVGTNPKVTQGGYKNLFRIIASDN
QIGASMAAYAAKVLKVKSVAVIDDRTAFGQGVAEEFTKEAKNLGLSVVGQ
EFTTDKATDFTAILTTLKAKKPEAIFFGGYAPQAGPLARQLQQLAIKTKL
LGGDTLCSPEMGKLGGEAVNDVVFCAQGGSILDKAANGPTFKAKFKKRFG
LDPDVYAAPFYDQTMFIGESMQKANSIDPNKVGAEIYKSTYKGIAGNYAY
DDKGNMKQAPITVYTFKNALPVPLASY
>Rfer_0211 ABC transporter related
MLLRGHEITRRWGGLLALNKVSLALQRGTVHAVIGTNGAGKSTLINILSG
EIQPSSGKVELLGQDVTTWSQPRRARAGLGRSYQRNTIYPSFTVLENCRL
AAQANVQKPWAWWSDAQRCSASMDSARAAATRAGLDDLLDRQAGLLSHGQ
KRQLEIAMCLATKPQVLLLDEPLAGMGAEETERMLTLLAELKASHAILLV
EHDMDAVFRIADCITVMVNGTVIACGSPDFVRNSPEVRIAYLGEH
>Rfer_3226 Ornithine cyclodeaminase
MQFIPKDEVARLTPYGALIQSLAKGLREPIESPPRSHFNPNHDASTVLIM
PAWRPNRMMGTKIVSIWPENNARGKPAVSAVYVLTSCEDGTTLAVIDGTE
LTLRRTAAAAALAARLLARPGSTRLAVLGTGALSAHMAMAHHSVFKLSET
VIWGRQLDKAQAVVDELAKVGIAARATTNLESTLAAIDIVAAVTTATAPF
IRSEWVKPGTHLGLIGAFTANMAEAEPQLLPGVRLFVDTREGVLQKGGEV
WQALRAGLISEADVRGELTELLASSPHMTGRSSEQDITVYKSVGFAALDL
IAAEHVLQGFTPLPAPALMAYPATTSVPTGQKPPSKTDSPR
>Rfer_3659 major facilitator superfamily MFS_1
MNQPVSNEPAAEVSSPELRQRIHPDVLKLGLVSFLTDLSSEMIFSVFAIF
FTTVAGASSALLGLIEGLADFSASSLNYLAGWLSDRSGRRKWLATAGYGF
STLAKLILLASSSVLGLSIFRVIERLGKGFRGPPRDAWLSSIAVKESRGF
AFGVHKALDKSGAVLGPLVAYGLLSWLGESASTYRALFLVAFVPAVISVL
VLTRIPDQPGVPHERESIGQNWQQLSPGFKRFLIPAGVFALAYFSLGFIL
LKAHAVGFGVTDIVLLYALFNITCVVSAPLVGKLGDKIGRSRIIVLSYAI
YAVINLWLVVASSRWEMVALFAIYGLFYAIDESQSKAFIADLEPERRATA
VGVYNFVTGLLYLPASLVAGALWALTPGLAFAMAVALSLAAMVVFAVLRP
VASTPA
>Rfer_3539 inner-membrane translocator
MFYRENGQFKTTYRADQQIFPIAQDRWAVLLLIAAAFIVVPMLSSGYMFR
AILIPFLIMSLAALGVNILVGYCGQISLGSGAFMAVGAYAAFNFFVRVPG
MPLLLALILGGLCASAFGILFGLPSLRVKGLYLAVATLAAQFFSDWMFLR
IKWFTNDAPSGSVSVAGLQVFGIPIESPTSKYLFCLTILVVLALLAKNLV
RSAVGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSFIIGVAGALWGFV
YLSAWEPAAFSVDLSFKLLFMVIIGGMGSIMGSFFGAAFIVILPIFLNQF
LPFLGRAVGVPISTVVTSHAELIVFGSLIVWFLIVEPHGLAKLWSIGKQK
LRLWPFPH
>Rfer_1031 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
MISGIQIQYLGVAALWTVGLTLMALIGGSILGFCIALFRVSPNSVLRYLS
VVYIQTIQGIPLLVLLFIAYFGFSIAGFNPSPFVTVVVAFSLYSAAYLGE
IWRGCIQTVPKPQWEASGSLGFNRYQQLRLVIIPQAFRIATPPTVGFLVQ
LVKNTSLASTVGFIELARAGQILNNTTFKPFSVFLLVALFYFGLCFPLSL
LSKKLERSLNVAHR
>Rfer_2969 extracellular solute-binding protein, family 3
MKKHVLWLMAGLMGAIVLTGCGKKEAPAAPAPAKAIVIGLDDNFPPMGFR
DDKNELIGFDIDLAKEAGKRLGVAVNFKPIDWNAKEAELNGNRIDVLWNG
LTITEERKANILFTKPYLENRQIIVVTEKSPIATKAQLAGAVVGVQDGSS
AVEAIQKDAATAKSIKELKKFGDNVTALMDLSAGRLDALVVDEIVGRYYT
GKKPGEYRVLEDNFGTEDYGVGTRKSDTELSARLNKALDDMKADGTAAKI
STQWFGKDIVKK
>Rfer_0240 FAD dependent oxidoreductase
MSHTGNTGTESKRSIAIIGAGVVGAASALALAAEGYLVTVFDHGEIGAGT
SSGNAGGIVTGAVTPTATPGVLRSIPSYILDPHGAAVLRPSYFFQVLPWL
LRFIEAGRPTRVSTIARALDPLVSKAMQSHLALADVSGSRDLIRPVGWLK
VYGSDAGFSETELERELMTRHGVNFSVLTADEVADLEPKLNKNSYTRGLF
QPDSGFVNYPMGLTQAYFEGARQRQAQYIQECVLEVRPSEGGGISIKTDK
TSRRFDSVVVAAGAWSKKFAKQIGDSVSLDTERGYHISFGSTGDELLRRP
VGFPEKHCVLSPMHDGISLVSGDELAGLTAPPDYRRIRALAPFARSVLPG
LAEQTIQREWMGYRPSTPDSLPVIGRSPSCRNVFYAFGHGHLGLTLAAIT
AQLIAGMVSGRPDPFDLSPYRIDRF
>Rfer_0755 Dihydrodipicolinate reductase
MTQNLTHRVAIAGASGRMGQMLIEAIKSAPDCELTGALDVPTSPALGADA
MAFLGQTSGVAITADLAVGLKQARTLIDFTRPEGTLAHVRMCRELGVNVV
IGTTGFSDAQKAEITAATRDIAIVMAPNMSVGVNVTLKLLEMAAKALATG
YDIEIIEAHHRHKVDAPSGTALKMGEVVAGALGRDLKDCAVYARQGVTGE
RDPSSIGFATIRGGDIVGDHTVLFAGIGERIEISHKSSSRATYAQGSLRA
LRFLSQQKAGLYDMADVLNLK
>Rfer_0358 major facilitator superfamily MFS_1
MDLKILFTTRVVRLFCYGFLSLLLALYLAQVGLTDPQIGLLFSLTLAGDA
AVSLWLTTSADRFGRRRTLQIGALLMLGAGLVFILTDNIVLLMAAAIVGV
ISPSGNEIGPFLPVEQAGLSQIVPSQKRTQVFAWYNLAGSFATAMGALCG
GWVVQILQGRGWLALDAYRVVLGAYAAGGLVLTLLFLTLSPAVEVQERAP
VGTRLVLGLHRSRAVVLRLSALFALDAFAGGLILQSMIAYWFHIKFGVDT
GLLGSLFFGANVLAGISALLAVPLAKRFGLINTMVFTHVPSNLLLILVPL
MPNLPLAIGLLLARFSISQMDVPTRQSYTMAVVSADERSAAAGVTGIARS
VGASLAPVLTGIFLTNPALFSLPFFLCGGLKLVYDLALYRSFKAVKPPEE
TLSQSGAKFP
>Rfer_0968 ABC transporter related
MDSNILEIRNLHKRFGAVEVLKGIDCSMKQGDVVCVIGSSGSGKTTMLRC
INMLEDFDDGSIRIDNQDIGYETRDGVRRRKNEKEIAKQRALTGMAFQQF
NLFPHMTATENIMLGLVKVKNMRRDEAHSIAEKWLDRVGLLERRDYYPGQ
LSGGQQQRVAIARAIAMSPKLMLFDEVTSALDPELVNEVLLVIKDLAREG
MTMLLVTHEMRFAFEVSTRVIFMNQGRIGEEGDPREMFLKPKTERLAEFL
KSSTFN
>Rfer_2208 Oligopeptidase A
MNNPLLSFDDLPLFDQIKPEHVAPAVDQLLAAASAALTRVTAPDFPARWS
DIASVLDVATEKLGRAWGAVSHLNSVADTPELRAAYNEALPKITEFFTRL
GADERLYAKYKAIDPTSLDAEQRQAHKNALRNFVLGGAELVGADRERFAA
IQERQAELGQKFSENALDATDAFAYYAQASELDGVPDDVQQAALTAAQAE
GKEGYKLTLKMPCYLPVMQFARKSALREKLYRAYVTRASDQADPQTRKFD
NSALISEMLALRLEEAKLLGYRNFGELSVVPKMAESPEHVVTFLRDLATK
ARPFAEQDLADLREFATQQLNLPDPQAWDWPYVSEKLKEARYAFSEQEVK
QYFPAPKVLAGLFKIVETLFDVNIREDHAPVWNAGVKFYRIERTGHLVGQ
FYLDPSARTGKRGGAWMDDVRSRWLRPDTHQLQTPVAHLVCNFAEGVGDK
PALLTHDDVTTLFHEFGHGLHHLLSQVNERDVSGISGVEWDAVELPSQFM
ENFCWEWDVLRHMSAHVDTGAPLPRALFDKMLAAKNFQSGMQTLRQIEFS
LFDMLLHTAHDPALDLMPLLNQVRAEVAVLQPPDWSRTAHTFSHIFAGGY
AAGYYSYKWAEVLSADAYAAFEETVGQDGLPNVETGRKYRQAILEAGGSR
PAMESFKAFRGRAPNLDALLRHQGMSGKK
>Rfer_0845 Tartrate dehydrogenase
MKTYKIACIPGDGIGKEVVPAGQTVLEALAASSNTFKFEFENFGWGGDWY
RAHGAMMPADGLDALRGKDAILFGSAGDPDIPDHITLWGLRLKICQGFDQ
YANVRPTRILPGIDAPLKRCRPEDLDWVIVRENSEGEYSGVGGRVHQGQP
IEAATDLSMMTRAGVERIMRYAFKQAQSRPRKLLTVVTKSNAQRHAMVMW
DEIAVQISKEFPDVTWDKELVDAATARMVNRPATLDTLVATNLHADILSD
LAAALAGSLGIAPTANIDPERRYPSMFEPIHGSAFDIMGRGLANPVGTFW
SVVMLLEHLGELEAARRLMQAIEQVTANPALHTRDLGGKATTTEVTQAVC
SQLAKSSKGKGA
>Rfer_2552 Glyoxalase I
MRFLHTMLRVGNLQRSIDFYTQVLGMKLLRTSENPEYKYSLAFVGFGSNP
EHAEIELTYNWGVDSYDLGNAFGHLALAVPDCRRACDQIKAAGGQVTREA
GPVKGGTTVIAFVTDPDGYKIELIERADQASGAGLR
>Rfer_1077 extracellular ligand-binding receptor
MKLKTLVAAMAIGFAAAASAQTTGPVKIGFITDMSSVYADIDGPAGGEMV
KWAAQDFGGKVLNRPIEVLTADHQNKADVASSKAREWIDKDGLSMLIGGT
NSGTSLAMAKVAEEKKRPFISIGAGSARLTNEACSPYTVHYAYDTVALAK
VAGTALVKAGAKTWFFLTADYAFGYSLEGDASNVVKANGGTVVGAVRHPL
NASDFSSFLLQAQSSKAQILGLANAGGDFTNAMKAAKEFGINKTMKIAGL
LVFINDVHSLGLANTEGLQLADSWYWNQDDASRKFAKRFFDKYKRMPSSV
QAADYSAAANYLKAVQTAGTTDADKVMSTLKGMKIDDFYNKGQIRADGRM
IHDMYLFQVKSPKESTVPWDYYKTVAKIPGEQAFTTVAESKCALNKK
>Rfer_0166 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
MNHHEQLDAWIDTHFDEQVKFLQQLIQVPTDTPPGNNTPHAERAADLLDA
MGLTTERHAVPHELVKAAGLQTITNLVVRRQYGVGRTIALNAHGDVVPPG
EGWVHGPYGGEIENGKIYGRAAAVSKCDFSTYAFAVRALESLGIALHGNV
ELLFTYDEEFGGEVGPAWLLQNKLTKPDLMIAAGFSYQVVTAHNGCLQMQ
VTVHGKMAHAAIPETGIDALQGANKILTALYAQNTLYEQITSNVAGIKHP
YLNVGSIEGGTNTNVVPARVTLKLDRRMIPEETPAEVEANIRQVIADAAA
LTPGITVEVKRILLANALKPLPGNKPLVQVLQKHASEVFGETIPVLGTPL
YTDVRIFCEAGIPGVIYGAGPRTVLESNAKRADENLDLQDLRRATKVIAR
SLLDLLS
>Rfer_2119 Extracellular ligand-binding receptor
MQMKLKITVVAAIAAAAGVAMAQETVVKIGHVAPISGAQATYGRDNENGA
LMAVDDLNAAGVVIAGKKVKLQLVAEDDAADPKQGAAVAQKLCDAKVNGV
VGHLNSGTTIPASKIYHDCGIPMVTPSATNPNLTKPGYKTTFRLLANDNS
LGAGLAFYAADTLKLKRIAVIDDRTAYGQGVADIFKKTAASKGITIVDEQ
FTTDKAVDFMAILTAIKGKNPDGVFFGGMDAQAGPMLRQMEQLGLNNVKY
FGGDGICTQDLIKQSAGAKTLENVICAEGGASLAKMPGGVAWKARYDAKY
PGQFQVYSPYVYDAVNVIVDAMKRAGSADPKVYLPKLAETNYKGITTNVQ
FEPNGELKNPAMTIYTYKGGKKAALN
>Rfer_3169 ABC transporter related
MAKTLLKVTGLKVAYGGIQAVKGIDFEVHEGELVSLIGSNGAGKTTTMKA
ITGSLPINDGDIEYLGKSIRGQGPWDLVKQGLAMVPEGRGVFTRMTIIEN
LQMGAYIRNDKPEIQADIDKVFTIFPRLKERRDQLAGTLSGGEQQMLAMG
RALMSRPKVLLMDEPSMGLAPIMVDKIFEVVRDVYAQGVTVLLVEQNASR
ALAIADRGYVMESGIITMSGDAKTMLHDPKVRAAYLGE
>Rfer_1936 conserved hypothetical protein
MLSQRLMWIIWPAFLVAGVLEVLVFAMVDPQDLQWFGQPIGFSRQGVYTM
AFFVFWGITMLASGLTTLLSMSPFEVNRCPLPANARPESCSKQGRC
>Rfer_1206 major facilitator superfamily MFS_1
MSKRSVRRLFAHRQFMRFWFSRLAGVSANQMLMVGVAWHMYDITSSAWDL
GLVGLFQFVPALVLMLPAGHTADRFHRGRIFAACMGIQAVVALALIFATQ
FHFASRELILGISVLLGVARAFQMPAQQALTPQLVPQDMLQSALALSSSG
MQVAIIGGPALGGMLYTTGATTVYVTCALLLLVSAMLALLVRYQHQQAHL
AATWQTVLAGFTFVWHRKVLLGATSLDLFAVLLGGATALLPIYARDILHT
GPIGLGVLRSAPAVGALMMSLAIMRWPLTRHVGRRLLAAVAIFGVATIVF
GLSSHFGLSLVALAIAGAADSISVVTRSTLVQLETPNEMRGRVSAVNSMF
IGASNQLGEFESGATAALFGAVGSVVIGGVGTVLIAAGWFRLFPALARRD
RMGPTVAA
>Rfer_0649 protein of unknown function DUF6, transmembrane
MSNAMQRRLALAHRHVRMRVFRLPAVWRGMLWVALSGLLFTLLNTIVRNI
TLSLDPFQSQFLRYLFGVVAMLPLLWRQGLNAYRPVNLRGQFGRGAVHTA
GLMLWFTALPHIGLADMTAIGFTGPIFIMIGAAWFLGEDMRADRWVAAMV
GFAGVLVVVAPRLTGQGGWYSLVMLASAPVFSASFLMTKTLTRYEKPGVI
VLWQAISVTILSLPLGLMNWSSPTAWQWLGFVTAGVLGSLGHYCLTRGFR
VADISATQSLRFLDLIWASLMGWLVFSDVPNQTTLLGALVILASTVWIAR
REHRR
>Rfer_3809 ABC transporter related
MIRVKGLTKQFGTLEVLRGIDCSIQASEVVCVIGPSGSGKSTFLRCLNGL
EDASGGQVLVGGVSVHDPRTDVDALRSEIGMVFQRFNLFPHKTVLENITL
APTKVRGLSAAQAHSRAHDLLVKVGLLDKIDAYPNQLSGGQQQRVAIARA
LAMQPRIMLFDEPTSALDPEMVGEVLAVMQALAEEGMTMVVVTHEMGFAR
QVADRVLFIDEGLVVEAGTPADLFDRPQEERTRRFLSKVL
>Rfer_0856 major facilitator superfamily MFS_1
MTHHVTRLKVLSAGIFSLILALGVARFSYTPLLPLMQQQAGLGVAAAGWL
AAINYAGYLSGALIASRISSLVLKDRLYRIGMVLAIASTLVMGLSTNVVV
WALSRYVAGLTSAAAILLGTGLIMNWLIRHNHRSEMGIHFAGIGLGIAGC
AGAVMLFTPWLDWREQWFAFTAVGCVLLVPALRWLPPPDTSGLTSSGQKL
RDKPPSPLYLRVFMAAYFCAGFGYVVSVTFIVAIVNHLPGLTGWGNLAFL
AIGIGAAPACINWDLIARRTGDLNALILAAVLQIVGILLPVLAPGPWAAM
LGALLFGGTFIGMVSLVLSMAGRYYPTMPAKMMGKMTLSYGVAQIMGPAI
TGMIGAQFGSYNAGLYVAAGVMVLGVGFLFVLKVVERRDAQGASRQP
>Rfer_2097 dihydrodipicolinate synthase
MTSSTSQITGSIVALVTPMLDDGSVDYPALRKLIDWHIAEGTDCIGVVGT
TGESPTVNVQEHCEIIRVAVEQAAGRVPIMAGCGANCTAEAIELTQFAKK
VGADCQLQVVPYYNKPTQEGQYRHFKAIAEAVDLPMVLYNVPGRAVADMA
HDTVLRLAQVPGIVGIKEATGQIDRAQWLIREAPKGFAIYSGDDPTAVAL
MLCGGHGNVSVTANIAPRLMHELCVAAMAGDTKRAMEIQFKLLPLHKNLF
IEANPIPVKWAVARLKLCGGTLRLPMTPLTPANEAALESALHASGLL
>Rfer_0591 transcriptional regulator, GntR family
MFSLNPQSATPLVLQIVDGFRLAIQDGSLRPGSKAPSIRQFAHAHGVSVF
TVVDAYDRLVAQGYFTSRPHSGFFVRQRPVSNIEVPGHGPNFNFDSMWYL
RRIFENRALRIKPGCGWLPGDWLFQDGVRRSLRSLATDDVDLGGYGEPKG
YPPLRQLVRDLLAEQEIAVSSEQVLLTQGSSQAMDLVARRLVRPGDAVLV
DEPGYPNLLFSLRFLGARLIGVPRTPVGYDLVTLERLVIKHQPKLFFTQP
RLQSPTGSVAQLAHLHRVMQLADKYDFLVVENDIYADLDPEPRPSLASLD
QLNRVIYISSFSKTISPNIRVGYLAANPDLLEDLAQLKMISGLTSSEFSE
RLAYGALMDGRWRKHVKNLRERLAKAHEGAASRLLKIGFEIFCEPKAGIF
LWAKHPAIADSAELAYKATEQDILLGPGHLFSPDLQPSPWLRFNVIFCDE
PALFTFLEQQCRAL
>Rfer_4199 pyruvate carboxyltransferase
MEHIFITDVAPRDGLQSQAVTVSTSNKLRLIRALADAGVRSVEATSFVSP
KAVPQMADAAEVIAGLRFLESETGLRTSALVPNIKGLERATAVGAREIAV
VISATKTMNLKNINMNLAEAEENCKATLHAARASGLATRAYIAVAWECPF
EGVTDPDTVVRLAAAMRVAGAGEIVIADTIGAAAPGQVAALLRVLAQSIP
LDMLAVHFHDTRGMGAANAYAALEAGVRRFDASVGGIGGCPFAPGAAGNL
ATEDLVMLAHQCGFTTGINLDVLLLAVDMSEAFLGRPLGGRSMPWLRNRQ
QQRVAQGS
>Rfer_1080 protein of unknown function DUF6, transmembrane
MKNSLSLRHFLLALAVVAVWGTNFVVIKLALGQMPPLLFATLRFAVVVVP
TVFFLPRPKVPWRNLAAYGLLIGVGQFGLLFIAMNGHISPGLASLVIQVQ
VFFTIGLAMRLAGEQLQRMQWLALALASAGIGIIVLHTDGSTTLLGLALI
LLAALAWAGGNIVAREAGRVNMVAYVVWSSLFAVPPLAALSLWVEGWDAV
AAGLRGADAVVWAAVAWQAWGNSLFGYAAWGWLLARYPAATITPMALLVP
LFGMGAAALWLGEGLPGWKLSAAALVMGGLALNLLWPKWRQWLRQRPVAN
>Rfer_2606 aminotransferase, class I and II
MQFADRLKNVETSAIRELFKLLGKPGIISFAGGFPDPALFDAEGIAQASQ
AVLTHNPGPVLQYGATEGYQPLREGISTFMEGKGSSVRPEGLIVTTGSQQ
ALDLIGKTMISPGDKVIVEAPTFLATIQCFRLYGAHIIGAPIDADGVDVD
KLEALIEEHKPKLVYLIPTFGNPSGATLSLARRQRILEIAVRTQTLVVED
DPYGELYFDQAPPPSLLALSDGVPGSRDWLAHCGSFSKILSPGLRVGWLV
APPALLANATMCKQFSDAHTSNLTQAICAHYLTMNRLDATLAVVRRTYAE
RARVMAESLRRELGDAIAFNQPRGGMFFWARLTGANGKGSHAPDFAKRAI
DQGVAFVPGAPFFAHDPDLSTLRLSFATADVAKIEEGIGRLAQAL
>Rfer_3509 thiamine pyrophosphate enzyme-like TPP binding protein
MKKTGAWLARYALEQLGIRYTFGIPGVHNTELYDELNKSELITPMLVSHE
GGASFMADGLSRLSDSVGTLLVVPAAGLTHAASGIGEAFLDGVPMLVICG
GIRTDIDWKFQLHEMDLHQFMKGITKATYKIEHTRDVVSTLFEAYRVATT
GEPGPVFIELPMNVQMFPDDVGELPRWAAPALPEPAAATPIDAAVALLQN
ARKPGLFVGWGARDCSAELMALADHLQAPVATTLQGFSVFPASHPLHAGF
SFGPSAVPAARNAFVDCDVLLAVGTRFGEIASGSFGLTVPSQLIHVDICS
HVFNANYPAQVAIEGDARVVVPQLLAALRRVQPAARAETGLAGRIAADKK
AYRQTWYDHDSQGRVNPARFFDALRAATPADAVTVVDDGNHTYLTAELWP
ILTAKSGILPSDFNAMGYSIPAAMGAKLARPDVPVNCIVGDGCFRMTCME
IITATQYQLGVVYYVFCDGELSQISQAQEIPYNRKPCTVLSTIVIDGVAR
AVGAGYFKIATDADLTEQIAAANAMAKKGQPVIVEVSMDYSKRTAFTEGV
VKTNFQRFTLKQKARALGRAVVRKVTG
>Rfer_3409 peptidase T2, asparaginase 2
MNPKPSSPSFNAGYGAVFTHEGTHELDAAIMDGATLRAGAVACVSRVRRP
LRAARAVMERSEHVLLVAAGAEAFAQACGLELVDPAFFSTDARRTQLQHA
LSTDKSMMDHDGAALVFRASNTLAAPLLESSKLGTVGAVALDRHGNLAAA
TSTGGMTNKRCGRVGDSPLIGAGTYADNRTAAISCTGTGEVFIRGVVAYD
ICARMAYGGQTLDVAAHEVVMKTLAALGGRGGLIAVDAQGHLSFPFNTEG
MYRGHARLGEAPQTAIFAEGRARIK
>Rfer_1037 aminotransferase, class IV
MNALPPLPSYLNGEFTELPDAKISVMDRGFIFGDGVYEVVPVYGGRLFRF
EQHMARLDRSLTEVRIANPMTQAQWAEVALKLVSSYAAYTGAKAENINQL
VYIQITRGVAMRDHVMPTDITPTVFVMANKMNLPTDAQRSQGVVCVTADD
FRWEKAHIKSTSLLGSVLARQISFDAGAVETIMFRDGFLSEAAASNVWVI
KDGKVLGTPKDNLVLEGIRYRLLEEICRSKGIDFELRRVSRDEVVTADEL
LLSSATKEVLAVTTLDGRPVGAGRPGPVYAQLYAGYQKAKEQA
>Rfer_3621 protein of unknown function DUF6, transmembrane
MAELSPNETKSIMATRFCFPLFAMTTLTLPQPKHLLRLSDFTLLLVAMVW
GTSYGVAKGALAFYPVLGFLAVRFTLTFVLLLPALLRAPAVQKRDALRTG
LPLGMLMLGIFLCETFGVAHTQASNAAFLISLCVVLTPFAEWWLLGRRPA
QAMFVFAAISLLGAALLGGGISGRLSWGDGLMLAAAVLRAITVCQTSQLT
RHSSASALALTAVQAGVIGIGSLLLALLMPGDLSALPTQATFWQATLYLV
LGCTVFAFFAQNWALKHSAPSRVALLTSTEPAFGALFAVLWLGESLSATA
WLGGGLIVLAALWTTWRRS
>Rfer_2586 ABC transporter related
MLQLKNVSVRFGGLTAVNNVTLAVGTQDVVGLVGPNGAGKTTLFNAISGL
VRPTSGEITFDGADVMRAPMYKRARMGIGRTFQVPQPMHELTVRQNLAVA
QRFGTGSVDQKKIDEILEFTSLAGKAARNAATELALTELKALEVAKALAT
NPKLLLLDEVFAGLETTGKRHFMSMLKNLHDKFSVGIIIIEHDIETISNL
CQRVAVLNFGELIAEGTPEEVFRDPAVIKSYTGGGHA
>Rfer_0593 spermidine/putrescine ABC transporter ATP-binding subunit
MSSQELVKFAGVEKTYDGKTLVVRDLNLDIRAGEFLSLLGPSGSGKTTTL
MMLAGFESPTAGEIFLNGKPITRTPPHKRNFGMVFQNYALFPHMTIADNV
AYPLTVRNFSKAEREAKVLRALGMVQMDNLSARYPGQLSGGQQQRVALAR
ALVFDPQLVLMDEPLGALDKQLREHMQLELKALHRQLGLTFVYVTHDQSE
ALTMSDRVAVFSDGIIQQIDIVTGLYETPANHFVAGFVGDNTVFDGTVAA
TRDGQCDLRLASGTVLSGLNVNAAATSSRVHACIRPERIEVHPAGASPGV
NSLEAKVGDVIYFGDHLRLRCALPGQVDATVKIALSSPTVPQSGQTVWLR
LPPEHLRVYL
>Rfer_3524 acetylglutamate kinase
MTDVSNIAPRDKAEILAQALPYIRKFHGKTMVIKYGGNAMTDPALQADFA
EDVVLLKLVGINPVVVHGGGPQIEAALKRLGKKGEFIQGMRVTDAETMEI
VEWVLGGEVQQDIVGLINQAGGKAVGLTGRDGGMIRAQKLKMRDNTDASK
EYDVGQVGDIVSIDPSVVKALQDDAFIPVISPIGFGENNESYNINADVVA
AKLATVLKAEKLMMLTNISGVLDKAGNLLTNLSARQIDDLFLDGTISGGM
LPKISGALDAAKSGVNSVHIIDGRVPHVLLLEILTDQAFGTMIRSH
>Rfer_3652 Asparagine synthase, glutamine-hydrolyzing
MCGICGELRFDGAAPDLAAIARMSAQLARRGPDDAGTYQNGPLAFGHRRL
SIIDLSAAAHQPMVDAALQLALVFNGTIYNYRELRDELLSMGYTFFSEGD
SEVILKAYHAWGDQCVKRFIGMFAFAIWDQRSDQLFLARDRFGIKPLYLN
QTGQRLRFASSLPALLAGGGVDTTLDAVALHHHFTLHTVVPAPRTVLQGV
RKLPPASTLRLEPDGTSTQQVYWTLDATRPDKALSEAQWLAATRAQLALS
VKRRLLAADVPVGVLLSGGLDSSLLVGLLASQVPDLRTFSIGFEGVGAGS
EKADEFEYSDQIAQQFHTRHHQFSIPNHEVMQRLPEAVAQMTEPMVSHDV
IAFYLLAERVSKEVKVVMSGQGADEVFGGYFWYPKMDAAQGSPLARFSQH
YFDRDHAEYLQMIAPAFQVGDVTSKLIAGELSKPQADTFLDQVWRLDATT
LIVDDPVKRVDNMPMAWGLEVRVPFLDHELVELAAHMPPELKLKEGGKFA
LKAISRGLIPDAVIDRPKGYFPVPALKYVRGPFLELMRGILMSHACIERG
LYQREYVNKLLADPEAPEHFTRIQGSKLWHLALLEWWLQVHVDNL
>Rfer_1867 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
MIQKSIDSSAAKSELQAVLFEGIHPSAVEALEQAGYTRIVTHAKSLSGDE
LLAAIADAHFVGVRSRTQLTAEVLQHARQLVAVGCFCIGTNQVDLKEAMR
LGVPVFNAPFSNTRSVAELVLAQIIMLMRGIPEKNAVLHRGGWVKSAADS
FEVRGKTLGIIGYGHIGTQIGVLAEQLGMRVIFTDIEAKLPLGNAQPMSS
LEALLSAADVVTLHVPETPQTALMIGAAQLAAMKPGSHLINASRGSVVDI
EALTVALESRHLHGAAIDVFPIEPQGNDSVFVSPLTRFDNVILTPHIGGS
TLEAQINIGTEVAAKLIRYSSNGSTTSAVNFPEVALPAHTGRSRLLHIHH
NVPGVMAHVNERLSEAGINIAAQYLSTNEEVGYVVIDVDSAASQVALDEL
CAVPETIRCRILY
>Rfer_0348 transcriptional regulator, GntR family
MLSEYLLTEIARLGLQTKLPLHRQLYEALRRAMLDGKLCAGQRLPSSREL
TQDLGLSRNTVVAALNQLAVEGYLVSHIGSGTFVNDSVPKVAPRHRTAHE
KQGATLSRRGRALATTFCATQLEIQPFTPGIADFSAFPVALWQRLQNKHW
RMTYPDMLDYNFSGGYWPLRRAVADYLRVFRSVPLDVDQVIITSGTQQSM
ELCAQLLADHSDTVWLEDPAYWGAIKAFMATGLNLHSVPVDQEGIAPQAE
DEAVPPRLIYVTPSHQYPTGAVMSLARRHQILSIARRHKAWVLEDDYDSE
FRFSGPPISSLAGLDTDQRVLYLGSFSKVLYPGLKLGYLVVPKTLVPPFK
QAHYDLNRPGQMPLQAALAEFIEMGYFASALRRARQGYAERRQCLLAALQ
PCLGPYAHISGAEQGLHLCVRLPPTLDDKALAQRLGELGLTVRALSAYCL
RRTDAKGLVIGYGYATLTDIAHYGPLVAKAIAGALACLTPKLESL
>Rfer_3224 binding-protein-dependent transport systems inner membrane component
MPTESTRSAMPYARLMLMLLLAPALLWLLGLIVLPHVELGILSLRARVAP
RVYEASLAQYRTFIEEPLYWHTFVRTALMSILATAVTLVMAFPIAWTIAK
LARGRNKSMLFVLCLIPFWVSETVRTLGWMILLRESGVLPQLLVWLGLSP
APIEMLYHDATILVGLVYTSMLFMVIPLISALESLDDSLIEAAYDLGGNG
WSILRQIVIPHAAPGIVAGCIVVFMLTLGNYLTPTLLGGKNSQWFTEQIY
TQFITRFNWEQGAAFGFLLLGLSTAIVWAGLRLSGQKFGEVMQRS
>Rfer_3602 anthranilate phosphoribosyltransferase
MPNTHKITPQEALLRTIEHREIFHDEMLHIMRGIMTGEWSPVMMAALITG
LRVKKETIGEITAAAQVMREFSTKVNVADTSHLVDIVGTGGDGSHTFNIS
TCAMFVAAAAGARVSKHGGRSVSSKSGSADVMESLGVNINLSPEAIAQCI
EQVGVGFMFAPNHHPAMKNVAPVRKELGIKTIFNLLGPLTNPAGAPNILM
GVFHPDLVGIQVRALQRLGAEHAVVVYGKDGMDEVSLGATTLVGELKHGE
ITEYEIHPEDFGMVMASNRALKVETPEQSKTMLQGVLDNAAGAPKDIVIL
NAGVALYAANVVPTMSAGIDKARVAIESGAARAKLAQLVSMSQQLKGAAK
>Rfer_3413 shikimate 5-dehydrogenase
MPVKSTHRPNSSTMSLDLYCVMGNPVAHSRSPWIHARFAELTGQAMHYGR
RHIELDDFALAVQTFIQEGGRGCNITVPFKFEAAALATHTSERASLAQAS
NTLTFQPGQILADNTDGAGLVDDIQQGAGFDLQGRRLLLIGAGGAAAGVL
GPLILARPASITVANRTLPKATALVERHAALATLQETELLTHDLRGLQGS
FDVVINATMSSLSGAGVPVAGSTLRPGGLAYDMMYGPAAQGFMTWAREHG
ALPRDGLGMLVRQAAESFLIWRGVRPPAQQVLAELRAVMQP
>Rfer_3541 ABC transporter related
MSKKIGDVVLDVKNISLSFGGVKALTDISFDVREHEVRAIIGPNGAGKSS
MLNCINGVYTPQQGSISFRGKTFSHMDSHAVAAMGIARTFQNLALFKGMS
VIDNIMTGRNLRIKSNLFLQALRIGPAQREEEKHREFVEHIIDFLEIQAH
RKTPVGQLPYGLQKRVDLGRALAMEPQVLLLDEPMAGMNVEEKQDMCRFV
LDVNQEFGTTVVLIEHDMGVVMDISDRVVVLDYGKKIGDGTPDEVRNNEE
VISAYLGTGH
>Rfer_1787 tryptophan synthase, alpha subunit
MSRIARTFAGLKAQGRKALIPYVTAGFPFPDITPELMHAFVAGGADVIEL
GVPFSDPSADGPVIQKAGDKALAAGIGMVQVLDMVRTFRTRDASTPVVLM
GYANPVERYNQKHDRHDGKSAFVLDAAAAGVDGVLIVDYPPEECEAFAAE
LKSAGLDLIFLLAPTSTDERMQQVARVASGYVYYVSLKGVTGSGALDTGA
VEAMLPRIRAHVQVPVGVGFGIRDAATARTIGQVADAVVIGSKIIQLIDE
QPRDQVGPVAQKFLCEIRTALDN
>Rfer_2277 FAD dependent oxidoreductase
MGYHWSDAVFPRKNLIELDRPQNLSRLSQSHWMKEAEPLEPSTRPLNGKK
FADVAIIGGGYVGLWTALTIKAEHPEARVVVLERDICGGGASGRNGGFAM
SWWPKISTLMGIADKDEAIRLAVASEQAISELGQFCQDNGIDAHFVQGGW
LWTATSEFQRDAWRDTLHACAKIGKRPFQNLSDEDVSRRTGSRVHLAGVY
EQSNATVQPAFLARGLRKVALQRGVEIYENTAVVSLSTNAPSILMTAHGE
VQAQAVVLANNAWAAAIPELGQLITPVNSTIIATEPVPERLREIGWTGGE
SITDSQLMVGYYRTTRDGRIVYGKGTGVIQYQSVIGECFSQSPEATALTL
ADFRRSFPMLRDVKIDDQWAGPIDRTYDSLPVFGTLRDAGHISYGVGWSG
NGVAPSRIGGKILSALALGLRNEWSGCALVNRSSRKFPPEPFRFVGGSLV
RNAVLRKEQTEALGKMPHWWDVKFAGLAPAGLEDKS
>Rfer_2475 Tryptophanase
MPKTLIEPFRIKSVEPIRMTTRPERERLLAAAKLNVFKLRAEDVLIDWLT
DSGTGAMSSKQWGAIMEGDESYAGARSFYRLEAVIQGITGMQHFVPTHQG
RAAEKVLFTAVCKKGDLVPNNSHFDTTRANLEYLGVEAVDLVIPEGLQPA
LLYPFKGNIDLARVEALLKTEGDRIPFGMITVTNNTGGGQPVSMANIRAY
AKLLKAYGKPLIMDVCRFSENAMFIKMREPGYENTPIKQIVQEMFSYADG
ATMSAKKDGMVNIGGFIVLRSEEWMDAVRNVLIMTEGFPTYGGLAGRDLE
ALAVGLEEGMQEDYLRYRLRTAEYLGERLEASGVGFVKPTGGHAVYIDAK
TVLPNMPIQHYPAWALCNALYLEGGIRGVEIGSVMFGKRLLDGSETYHSM
ELVRLAFPRRMYTQSHFDYAAEVIDEVKQKAASIRGVKITKQPQYLRHFT
CECDWV
>Rfer_1524 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
MSSSYYSSILYGAVLTVGVSLAALLVAIILGLAGAGAKLSGRPILVALAT
LYTTIIRGIPELVLMLLVFYGGTIGLNNLFEAMGSETTVDINPFFAGVLT
IGFIYGAYMTETFRGAILAIPKGQAEAAWAFGMGRTQTFMRITAPQMVRY
ALPGFTNNWLVLIKATALVSLIGLQEMTYLAKQASAATRSPFAYFLFTAA
LFLIYTTVSLMVLRRLNARYSLGTKRVQL
>Rfer_1987 D-amino-acid dehydrogenase
MKIAVIGAGIIGVTTAYELSRDGHDVTVLERCGAAAEEASFANAGIVAPG
MPNREVSPIFSRPTPIRLSWPISAHELAWFWKWRRARRLDRHRASQAQRQ
SLASYSRERLHHITADLKLDYERSEGLLMLLRSEQDSKMVQPGLQLMREA
GRDFKELSAPDVRKLEPALSPDTPFFGAIQLIDAEVANCRQFALLLKNES
QRCGVKFEFNTEVTHISSAGGVTLTVAGETGARPFDAAVICAGTDSARLL
GPLGIRLALAAVHGYSISAPIREPLNAPRSGVIDRRHQVAITRLGNRVRV
SGLAELGGVPGRNRADALQTLYRVLHDWFPGAAKLSSGVQEWKGARPMLP
DGAPVVGASGVPGLWLNLGHGASGWALSCGSARVLADLMAGRPPDLDVNA
FGIERLGR
>Rfer_0164 ABC transporter related
MTTSPNSPFALVDIRGLHKSFGATEVLKGIDLQVGRKEVVSIIGKSGSGK
STLLRCINGLETFERGTLTVDGQALQHGDANAMRELRQQVGMIFQSFNLF
PHLSAGRNVMLAPTLVKDLPKEEAKARAQALLERVGLGSLFDRMPDQLSG
GQQQRVAIARALAMAPTVLLCDEITSALDPELVGEVLQVVEMLAVDGMTL
ILVTHEMAFARKVSDRVVFMHQGLIHEAGTPDEIFNRPQTPELRQFLSAL
RD
>Rfer_0803 ferredoxin-dependent glutamate synthase
MLDYLNTIFPVRYTVLGLSGFGLLLAIFSLVALGEGAAVALLFLLLVGIG
VFDLLQTRRALLRNYPIVGHLHFMLAYLPPASRQDLGESGRQAAPFSRAQ
RALVVQRAKAQSEQRAFGTALAVQAEGYEWLNHSMAPTRLDSHDFRLAIG
ADRAQPYSASVFNISAMSFGALSANAILALNAGARRGGFAHDSGEGSISS
HHRVHGGDLIWEIGSGYFGCRNDNGTFNADKFSNQARDPQIKMIELKLSQ
GAQPGCACVLPAIKVTPEIAAARGVPAGVDCVSPAAHSAFTTPLELLQFV
ARLRDISEGKPTGIKLCIGHPWEWFALVKAMLTSGITPDFMVLDGAEGGT
GAAPREFTDHVGAPLEEGLLLVHNTLRGAGLREQIKLGCAGKVTSAFDMA
RLMALGADWCNSARGFMFALGCIQSQHCHTNQCPTGVATQDPLRQRSLVV
PDKAQRVYNFHQQTLRALQELVQAAGLVQPRDITPHHILRRTAKHQVKSL
AQLLLTPLPFGALLQDDLSALPLVYQQHWPLARTDSFTLLN
>Rfer_0268 inner-membrane translocator
MDFSIASILLLDGITNGAVYALLGLATVLVFSVTRVIFIPQGEFVAYGAL
TLAIFQTGKVPGTVWLLLIMAVLAALMDARLSWQHTGDAKRALKAGLSAL
AAPLVVSLLSIWAAPHQLPLLVQALLTVAIVTAFGPLVYRLAYQSLADAS
SLVLLIVSVGVHFAMTGLGLLFFGAEGFRNPSFWDERLNLGPLAITGQAI
IIVLTSLAMIVLLWQFFNRTLYGKALQATAVNRLGARLMGISTHGAGQAT
FAMAALIGALSGLLIGPTTTVFYDSGFLIGLKGFVAAVMGGLHSYPLAAL
GALFVGLVESFGSFWASAFKEVIVFTLVLPILLWRSVAGGNEEEH
>Rfer_0467 major facilitator superfamily MFS_1
MQAPPPINLRLVGWLSLAQLISWGSIFYTFALVMAPVERDLGLSRAESSL
AFSLALLVEGLLAYPVGRWIDRGHERIVMTGGSVLAGVCLLLQGSVTGMV
GFYAVWAGLGAAMAAVLYAPAFAVVTRRFPLDFRRAIILMTFLGGLASTV
FIPLTAWLMALWGWRHAFIALAALHLLVCAPLHALALRGAPRPSPRVAAA
DPQTVKGVTDFIFSAPFLLIGVFVVLLMAVTVALPAHMVSLLRENGLREV
WVIAIPAGIGVIQVLGRLLLYFFEHHVDPHLANRLIPCLIPLGLLALLAA
PLSADGQVGAVLLFVLLYGLGNGMLTIVKGTAIAQYVNRDHVATLNGALG
LPLALARAAAPLLLGLLWTAQAGYTHGLWLLLALSVLGVGALMLAQQLAL
RSR
>Rfer_1756 major facilitator superfamily MFS_1
MAAMNHPPHLWFRLVPAYALGYFLSYGLRSVNAVIAPELMHELDMTATGL
GLLTSAYLLAFGLFQLPLGLLLDRFGPRRVEAALLLVAASGCTLFGLGTT
IGVLALARALIGLGVSACLMASFKAFSQWFPVERLPSLTATIMVAGGLGA
LSASVPVEAALPLLGWRGVFFLCAGLLVLTAGFLLTVPDHAAGTRREPFV
QQLRSLRAIFCDRTFWRFAPQGCLVSGGFMAIQGLWAMPWLMEVSGVTRT
DAAGVLFLLALAMLAGFLFVATCSGRLARRGIAPMTLLSVGMGLALLTEL
AIILDLARPAWLWPLLGVSFSLSNIAYSQLSAAFPVALAGRVNTALNLLV
FVGAFGLQWGIGAAVDGFAGGMSRAAAFRLTFAALLLVQGLAFAWFLLPV
KRVHAAP
>Rfer_0487 major facilitator superfamily MFS_1
MKRGFFTIMSAQFFSSLADNALFVTAVQLLRSSHAPEWQQAALVPMFALF
YVVLAPFVGAFADSMPKGKVMLLSNFIKVLGCLFMLFGSHPLLAYAIVGL
GAAAYSPAKYGILTELLPASQLVKANGWIEGLTIASIILGVLLGGQLVGP
VIAPWLLAFDFPLVDTGVNNAPEAAICVLIFVYLLAAWFNTHIPLTGVEM
RPMSRRVTSLLPDFWACNVRLWRDKLGQISLAATTLIWGVAGNLRFIVLA
WAAAALGYSVTQASALQGVVAIGMAAGAVVASMRMRLEDGPRVITLGIVM
GILIILLIFITNVWVAAPFLILLGALGGFLVVPMNALLQHRGHNLMGSGR
SIAVQNFNEQACILGLGAAYSLSTGLGLPTFTAITGFGLVIAGFMWLIRR
WHARNCVVHQVEIEHLLSIARNDKFEV
>Rfer_0353 spermidine/putrescine ABC transporter ATP-binding subunit
MADAGSRDNYLVTEKLVKRFDEAVAVDEVDLSIKQGEIFALLGSSGCGKS
TLLRMLAGFETPTSGRILLSGQDVARLAPYERPFNMMFQSYALFPHLDIW
ENIAFGLKREGLPKSDIQQRVGEMLDLVQLTPYAKRKPHQLSGGQQQRVA
LARSLAKKPKVLLLDEPLGALDKKLREQTQFELVNIIEKVGVTCVMVTHD
QEEAMTMAGRIAVMSKGRVLQVGSPEEVYEHPSSRFVADFIGNVNLFDGR
LSIDQPDHCAVATSMGEIHVSHGVSGALNMPSAIAVRPEKIEINRERPAA
DHNVFAGKVKEIAYFGSYNTFIVQTEDGKRVKITEANTSRHELSHITWED
DVFFWWSDGAGVVLRD
>Rfer_0506 branched-chain amino acid aminotransferase
MSPVTPSMSDRDGKIWMDGQMVDWRDAKIHVLTHTLHYGCGVFEGVRAYN
AVGGTAIFRLEDHTERLFNSAKILRMKIPFSMDEVLAAQKAVVRENKLEG
GYIRPLSWIGDEKLGVSPKGNTIHLMVAAWPWGAYLGEEGMKRGIRVKTS
SFTRHHVNITMTQAKAVSNYSNSILANLEVTDEGYDEALLLDCSGFVSEG
PGENIFVVKDGVVYTPDLSSGALNGITRNTIFHIAKDLGLELIQKRITRD
EVYICDEAFFTGTAAEVTPIRELDRIELGKGDYVGSRGPITEKIQSAYFD
IVNGRNPKYAHWLSKV
>Rfer_3807 extracellular solute-binding protein, family 3
MNLLHKIVASAGLLTLALGSVQAQNKELVVGSSATYRPFAYENPAKEIVG
YDVDIIKAVAQKAGLQIKVVNTPWTGIFAALNNGDVDLVISGVTINDKRK
QSYDFTMPYFEARQLIAVQKDSTAKSLKDLAGKKIGVVTGSTGDDTVSRE
FGKTNPDIRRFESTPVVISELVNSGVDAAIGDNGVIAFRVQEHKQLKTVN
DPSFPKEYFGIVVKQGNKALLDKLNAGLSAIKADGSYAQIYKKWFLAEAP
VLPVQ
>Rfer_1426 protein of unknown function DUF6, transmembrane
MTHPRLTPTAALLLTLPPILWAGNAVIGRLIAPQVSPMTLNLLRWVIAFV
LLLPLAAPVLRRGSALWAGWQRFAGLSLLSIGGYNALLYLALNTSTPINV
TLVGSITPVWMLLIGWVFFGMRISGRQWLGAALSISGVLVVLSRGQLELL
LQVHLVAGDLYILLASAAWAYYSWMLAHPTTEPPDIRRDWSAFLLAQIAL
GLVWSGLFAGAEWSWGLGRLQGGWPLAGALLFIAAGPAVLAYRCYDAGVA
RVGPSVAGFFVNLTPLFAAILSSAFLGETPHLYHALAFILIVGGIAVSSM
RR
>Rfer_2101 FAD dependent oxidoreductase
MVELAAATCLHECGLPQAWCKQEAWRILETRFGQGLHFLTTWQAWRNDPQ
RPRMLHYVAVTAAPPDIDELLAGMASSPELLLLAKELAPQCLGLSTGFQR
LTFDGGHVLLTLCVGDLTAMLRAQQFAADSIYLTPDPTDCPDRCAASNWR
VWTAKALARCCRRGTTLVAPVDADHLYADLTQCGFELSTIQAGQPTGPEA
APTNISLRAQFNPRWTIKNTRNTLPARAMAVSSCAVIGAGLAGASVAASL
ARRGWQVQVLDQAHTPAAGASGLPVGLVVPHVSADDCVLSRLSRSGVRLM
LQQARSLLRQGQDWDATGVLERRLDGPPGVPDIWHPQAAWLKPTQLVRAW
LAQLGITFQGDAKVAALRQRGDEWELLDTDGGMLHRASRVVFANAGGAMA
LLDTLQARLPALNIRVNQFPVMQGVRGQVSWAMHTGLPDETFPPFPINGA
GSIVPWVPVDEDCGQNLAWFVGASYQPDSQPPAPDEKNHATNLARLHKLS
PKLGQALAGKFAAGAVNAWKNTRCVTADRLPAVGPLDQVDHPGLWMCAGM
GSRGLSFSMLCAELLAARWSGEPLPIDAGLARTLEARRGADCHRNRLDRS
PELPVSCAP
>Rfer_2129 binding-protein-dependent transport systems inner membrane component
MLSYILKRLLLMIPTLLGVLLITFMVVQFVPGGPVEQYLAEAKAGSGKGS
GAESGGLSYRGAQGVDPRRIEQIKALYGFDKPAHERFLQMLGQFARFDLG
RSFFQNKSVSELIWEKLPVSISLGLWTFFISYLIAVPLGVAKAVRAGSRF
DFVTTLLVLFGYAIPGFVLGVALLVIFGGQLQWFPLRGLTSGNWDELSWG
ARVVDYLWHIALPVTAMVLGSFAVTTMLTKNAFLEEIRKQYVVTARAKGL
DERQVLWKHVFRNALIPIITGFPAAFIGAFFTGSLLIETLFSLDGLGLLS
YESVIRRDYPVVLGTLYFFTLIGLVTKLISDLSYVWVDPRVKFD
>Rfer_0972 major facilitator superfamily MFS_1
MSRRSVRRLFAHRQFMRFWFARLAGVSANQMLMVGVAWHMYDITSSAWDL
GLVGLFQFVPALVLMLPAGHTADRFHRGRIFAACMGIQAVVALVLIFATQ
FHFASRELILGISVLLGVARAFQMPAQQALTPQLVPQDMLQSAVALSSSG
MQVAIIGGPALGGMLYTTGATTVYVTCALLLLVSAMLALLVRYQHQQAHL
AATWQTVLAGFTFVWHRKVLLGATSLDLFAVLLGGATALLPIYARDILHT
GPIGLGVLRSAPAVGALMMSLAIMRWPLTRHVGRRLLAAVAIFGVATIVF
GLSSHFGLSLVALAIAGAADSISVVTRSTLVQLETPNEMRGRVSAVNSMF
IGASNQLGEFESGATAALFGAVGSVVIGGVGTVLIAAGWFRLFPALARRD
RMGPTVAA
>Rfer_3251 conserved hypothetical protein
MKLRYMGSLMLALCAIATSVAAGPDCSRPLTLALHDHGLLYSADTDAGID
KDFADELIRRSGCKIAVSLMSRARIWQLIESGALDFSLSGITNAERNRFA
GFAWYFSNKYYLLVRRDSGVRQLADFERSDPFRLGVIRSFRYSESANRLV
DKLTLANRVSQANGLAPLYETLLLNRIQGMIIEPFDYPALDQKKIRDITS
VIEFDDPAVPHGLIMSKKALSPAEQDKWRALVNDMRADGTVRRIFEKYFD
PGLAAALVAFQPPP
>Rfer_4139 Methionine gamma-lyase
MTHLRTRAVHAGQHPDPGTGAIATPISQTTAFGYGTLEHGAAIFAGEAPG
YRYSRFANPTVAALEAKMADLEGAQAAVAFSSGTAATSSVLLGLLNPGDE
IAFLGPLYGGTEGLFRAVGERFGIRVVDATQQGLAASLTPATRMVWVETL
TNPSLRLHDLAEVAAIAKARGVLTVADNTFCTPCLVRPLAYGIDLAMHSM
TKYLGGHGDATGGIVAGSVALIAPVRKTGLGHVGGNLSPQEAFLFLRGIK
TLPLRMAAHCEGAAAVAHFLAGHPAVRVVHYPGLASHPQHALARRLLQGG
FGGMVAFELVRNERSAAAAVLNRLQLFTQAVSLGDVDSLACHPASTTHSF
VTAAVRAQNGVTEGLIRLSVGIEHPDDLMADLEHALRHAV
>Rfer_1567 3-phosphoshikimate 1-carboxyvinyltransferase
MFSTAFLDIPPLTGVSGTVVLPGSKSISNRVLLLSALSAGRTTLIDLLDS
DDTRVMFEALRALGCGVRQSGSTVEIEGLGGQLGHRQAALFMGNAGTAIR
PLTAALAVLGGDFELRGVPRMHERPIGDLVDALRQIGCHIDYLGQDGFPP
LHIGRPSLKLDTPIRVRGDVSSQFLTALLMALPLVAATRDIVIEVVGELI
SRPYIEITLNLLARFNVRVVRDGWQRFTIPAASQFRSPGTLFVEADASSA
SYFIAAGAIATGAGGQKGLRIEGVGADSIQGDIRFIEAAQMMGAQVQSGP
NWLEVSRGCWPLKAIDLDCNHIPDAAMTLAMMALYAQGSTTLRNIASWRV
KETDRIAAMACELRKLGATVEEGADFIRVTPPAVAADWRAASIHTYDDHR
MAMCFSLAAFNPAGLPVRIVDPKCVAKTFPDYFEALFSLAQTSAQAIPVI
CVDGPTASGKGTLAGAVAQALGYHLLDSGSLYRITALAALQAGLALEFAH
EQAIADLIPGLSIRFSQDQVFLNGVDVSEAIRTEEAGMNASRVSALPKVR
LALIALQHSFRQLPGLVADGRDMGTIIFPEAALKVFLTASAEKRAQRRYK
QLISKGISATLSGLRADLEARDARDTSRSVAPLKPAQDAQLLDNSDLTVE
ESVNLVLDWWQSKQPFRAI
>Rfer_0158 Amidase, hydantoinase/carbamoylase
MTSPQINAGRLLASLHALGQIGALPGGGVNRLALSDADREGRDWTVARMR
ELSMRVDIDAIGNIVGTFPGTEDLPPVMVGSHIDTVRTGGLYDGNYGVLS
GLEVVTALREAGVQPRRPLAVAVFTNEEGARFQPDMMGSLVYVGGLPLPD
ALATCDADGVSVQAELQRIGYQGTAPVGAPLVDSYVELHIEQGPVLEQLG
LQIGVVEGVQGISWTEFTVEGQSNHAGTTPMALRHDAALVAAQVAVFMRA
LSARLGGRQLATVGAVRLSPNLVNVIAQKAVFTVDLRNTDSAALAQAESD
LHAYAQQAAQAEGVRITSRTLARFEPVAFDPMVVNLVEQQTQALGCTYQR
MPSGAGHDAQMLARVCPSAMVFVPSVGGLSHNVREHTAPADLQRGAQVLL
QVVLALANRPSQLLPLNFYAPLP
>Rfer_0406 homoserine O-acetyltransferase
MKMIATPQSMQFDTVLPLQSGASLRGYALSFETYGELNADKSNAVLICHA
LNASHHVAGSYAGQDKSEGWWDNMIGPGKPLDTDKFFVIGVNNLGSCFGS
TGPMHINPDTGRVYGADFPVVTVEDWVNAQARLLDALGIQTLAAVMGGSL
GGMQALSWALQYPERVRHAVVIASAPNLTAENIAFNEVARRAIVTDPDFH
GGHFYAHGTVPKRGLRIARMIGHITYLSDDVMNEKFGRQLIAAGKGGAQD
DYLFSTLEAEFQIESYLRYQGDKFAEYFDANTYLLITRALDYFDPARTYG
GDLSHALARASCKFLLVSFTTDWRFAPKRSREIVKALLHNRRDVSYAEID
APHGHDAFLLDDPRYMGVLRSYFDSIKEPA
>Rfer_2890 serine O-acetyltransferase
MFSRIRSDIECILERDPAARTRWEVLTCYPGLHAVVLHRLAHWCWQHGFK
WLGRFTSHIARFLTGIEIHPGAKIGERVFFDHAMGVVVGETAEIGDGCTI
YQGVTLGGTSLYKGVKRHPTLGRNVVVGAGAQVLGGFTVGDGAKVGSNAV
VTKPVPAGATAVGNPARIIQAELDVKREEAASKMGFSAYGVTQNDDPLSQ
AMRGLIDNASTQEHQISMLWKAIEQLSVQRHDASVVPGDAAVSEHFEAEK
LNQLVGK
>Rfer_3567 2-keto-3-deoxygluconate permease
MAQIAIKKTLDRIPGGMMIVPLLLGAFFATFLPETPKFFGSFTGALFTGA
LPILAVFYVCMGASITLEATPYILKKGGALFGTKIVVALIFGVILGHFLG
EQPVGSGMFLGLSTLAVVAALNDTNGGLYMALMGQYGKPADVGAYTIMSL
ESGPFLTMLTLGVAGLSAFPWPTLVGAILPLAVGMLIGNLDRNMRDFLSK
AVPVMIPFFAFALGAGLDLHKVWQAGLMGVAMGVAVVVLTGIPLFFADRL
VGGNGVAGVAAASTAGNAATVPVIIAASNPVYAEAAKSATVIVASCVVIT
AILVPLLTAWVYKRVGADKASGAE
>Rfer_2996 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
MNIVILDDYQDAVRKLECAAKLAPYPAKVYTNTVKGLGQLSVRLKDASVI
VLIRERTQLPRALIEKLPKLKLIVQTGRVGSHIDLDACTELGIAVAEGSG
SPVAPAELTWALILAAMRRLPQYIGNLKHGAWQQSGLKTGSMPPNFGLGM
VLKGKTLGIWGYGKVGRLLAGYGQAFGMKVLVWGRAPARERAILDGFEAA
LSRDDFFAQSDVLSLHLRLVDETRGIVTLDDLTRMKPTALLVNTARAELI
EPDALISALNRGRPGMAAVDVFETEPILQGHALLRLENCICTPHIGYVEQ
DSYELYFGAAFDNVINFIKGTPTNIVNPGALQVERRR