Gene list
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COG category: Amino acid transport and metabolism
Organism: Rhodoferax ferrireducens DSM 15236, DSM 15236
Number of genes found: 432
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Rhodoferax ferrireducens DSM 15236, DSM 15236 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | Rfer_0343 | protein of unknown function DUF6, transmembrane | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 342770 | 870 | + | 0.605747 |
NA | Rfer_1015 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 1071328 | 750 | + | 0.586667 |
NA | Rfer_0392 | ribose-phosphate pyrophosphokinase | SubName: Full=Ribose-phosphate pyrophosphokinase; EC=2.7.6.1; | chromosome | CDS | 400069 | 987 | - | 0.632219 |
NA | Rfer_3773 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; | chromosome | CDS | 4212653 | 1251 | - | 0.632294 |
NA | Rfer_0236 | extracellular solute-binding protein, family 3 | SubName: Full=Extracellular solute-binding protein, family 3; Flags: Precursor; | chromosome | CDS | 234503 | 801 | + | 0.549313 |
NA | Rfer_0761 | gamma-glutamyl phosphate reductase | RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR; EC=1.2.1.41; AltName: Full=Glutamate-5-semialdehyde dehydrogenase; AltName: Full=Glutamyl-gamma-semialdehyde dehydrogenase; Short=GSA dehydrogenase; | chromosome | CDS | 796494 | 1335 | + | 0.621723 |
NA | Rfer_0126 | Allophanate hydrolase | SubName: Full=Allophanate hydrolase; EC=3.5.1.54; | chromosome | CDS | 130638 | 978 | - | 0.564417 |
NA | Rfer_2586 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 2847649 | 714 | - | 0.54902 |
NA | Rfer_2111 | aminotransferase, class I and II | SubName: Full=Aminotransferase; EC=2.6.1.-; Flags: Precursor; | chromosome | CDS | 2287837 | 1161 | - | 0.595177 |
NA | Rfer_1613 | selenide, water dikinase | SubName: Full=Selenophosphate synthase; EC=2.7.9.3; | chromosome | CDS | 1744260 | 2298 | - | 0.654482 |
NA | Rfer_0869 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 906716 | 1650 | - | 0.68303 |
NA | Rfer_3540 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; Flags: Precursor; | chromosome | CDS | 3936317 | 930 | - | 0.564516 |
NA | Rfer_3175 | Thermostable carboxypeptidase 1 | SubName: Full=Thermostable carboxypeptidase 1; EC=3.4.17.19; | chromosome | CDS | 3511388 | 1491 | - | 0.596915 |
NA | Rfer_2192 | Na+/solute symporter | SubName: Full=Na+/solute symporter; | chromosome | CDS | 2392928 | 2310 | + | 0.555844 |
NA | Rfer_3890 | Alcohol dehydrogenase, zinc-binding | SubName: Full=L-erythro-3,5-diaminohexanoate dehydrogenase; EC=1.4.1.11; | chromosome | CDS | 4341115 | 1044 | - | 0.597701 |
NA | Rfer_2184 | 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate | SubName: Full=2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate; | chromosome | CDS | 2381930 | 1626 | - | 0.583026 |
NA | Rfer_3824 | pyruvate carboxyltransferase | SubName: Full=Hydroxymethylglutaryl-CoA lyase; EC=4.1.3.4; | chromosome | CDS | 4267438 | 909 | - | 0.616062 |
NA | Rfer_0234 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 232916 | 732 | + | 0.590164 |
NA | Rfer_3846 | fumarate lyase | SubName: Full=Fumarate lyase; | chromosome | CDS | 4293705 | 1404 | - | 0.586895 |
NA | Rfer_3725 | transcriptional regulator, GntR family | SubName: Full=Transcriptional regulator, GntR family; | chromosome | CDS | 4156271 | 1446 | - | 0.643154 |
NA | Rfer_3462 | Lysine exporter protein (LYSE/YGGA) | SubName: Full=Lysine exporter protein (LYSE/YGGA); Flags: Precursor; | chromosome | CDS | 3854170 | 630 | - | 0.622222 |
NA | Rfer_1525 | extracellular solute-binding protein, family 3 | SubName: Full=Extracellular solute-binding protein, family 3; Flags: Precursor; | chromosome | CDS | 1641737 | 768 | - | 0.546875 |
NA | Rfer_3539 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; | chromosome | CDS | 3935217 | 1077 | - | 0.545961 |
NA | Rfer_0292 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 294584 | 738 | + | 0.681572 |
NA | Rfer_0212 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; Flags: Precursor; | chromosome | CDS | 209419 | 1014 | - | 0.621302 |
NA | Rfer_0347 | FAD dependent oxidoreductase | SubName: Full=FAD dependent oxidoreductase; | chromosome | CDS | 346200 | 1302 | + | 0.639785 |
NA | Rfer_3797 | translation elongation factor Tu | RecName: Full=Elongation factor Tu 2; Short=EF-Tu 2; | chromosome | CDS | 4236859 | 1191 | - | 0.594458 |
NA | Rfer_2031 | Twin-arginine translocation pathway signal | SubName: Full=Twin-arginine translocation pathway signal; Flags: Precursor; | chromosome | CDS | 2191845 | 1149 | - | 0.577024 |
NA | Rfer_1950 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like | SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; | chromosome | CDS | 2094271 | 1005 | - | 0.636816 |
NA | Rfer_3501 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 3892259 | 849 | + | 0.607774 |
NA | Rfer_1023 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; | chromosome | CDS | 1081289 | 1227 | + | 0.603097 |
NA | Rfer_2946 | Histidinol dehydrogenase | RecName: Full=Histidinol dehydrogenase; Short=HDH; EC=1.1.1.23; | chromosome | CDS | 3257837 | 1344 | + | 0.633929 |
NA | Rfer_3019 | glycine cleavage system T protein | RecName: Full=Aminomethyltransferase; EC=2.1.2.10; | chromosome | CDS | 3329895 | 1212 | + | 0.607261 |
NA | Rfer_0289 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; Flags: Precursor; | chromosome | CDS | 291939 | 873 | + | 0.613975 |
NA | Rfer_1837 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; | chromosome | CDS | 1975482 | 891 | - | 0.578002 |
NA | Rfer_2247 | Tartrate dehydrogenase | SubName: Full=Tartrate dehydrogenase; EC=1.1.1.93; | chromosome | CDS | 2461057 | 1086 | + | 0.560773 |
NA | Rfer_1078 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; | chromosome | CDS | 1152971 | 885 | + | 0.575141 |
NA | Rfer_2381 | 3-dehydroquinate dehydratase, type I | RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase; EC=4.2.1.10; AltName: Full=Type I DHQase; | chromosome | CDS | 2621411 | 795 | - | 0.561006 |
NA | Rfer_2099 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; Flags: Precursor; | chromosome | CDS | 2272672 | 1221 | - | 0.573301 |
NA | Rfer_2138 | protein of unknown function DUF6, transmembrane | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2320007 | 843 | + | 0.618031 |
NA | Rfer_1911 | aminotransferase, class I and II | SubName: Full=Aminotransferase; EC=2.6.1.-; | chromosome | CDS | 2051487 | 1281 | + | 0.596409 |
NA | Rfer_2513 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; | chromosome | CDS | 2775357 | 1182 | + | 0.642132 |
NA | Rfer_4191 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; | chromosome | CDS | 4660796 | 1146 | + | 0.625654 |
NA | Rfer_3782 | SSS sodium solute transporter superfamily | SubName: Full=SSS sodium solute transporter superfamily; Flags: Precursor; | chromosome | CDS | 4226266 | 1692 | + | 0.577423 |
NA | Rfer_0267 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 270735 | 1797 | - | 0.6266 |
NA | Rfer_0344 | threonine dehydratase | SubName: Full=L-threonine ammonia-lyase; EC=4.3.1.19; | chromosome | CDS | 343667 | 1200 | + | 0.6425 |
NA | Rfer_3808 | Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine | SubName: Full=Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; | chromosome | CDS | 4248424 | 768 | + | 0.613281 |
NA | Rfer_0967 | Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine | SubName: Full=Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; | chromosome | CDS | 1018090 | 669 | + | 0.532138 |
NA | Rfer_0219 | transcriptional regulator, XRE family with shikimate kinase activity | SubName: Full=Transcriptional regulator, XRE family with shikimate kinase activity; | chromosome | CDS | 217100 | 975 | + | 0.605128 |
NA | Rfer_1105 | phospholipase/Carboxylesterase | SubName: Full=Phospholipase/Carboxylesterase; Flags: Precursor; | chromosome | CDS | 1184641 | 762 | + | 0.562992 |
NA | Rfer_1487 | putative transporter signal peptide protein | SubName: Full=Putative transporter signal peptide protein; Flags: Precursor; | chromosome | CDS | 1600244 | 1305 | + | 0.591571 |
NA | Rfer_2589 | Extracellular ligand-binding receptor | SubName: Full=Extracellular ligand-binding receptor; Flags: Precursor; | chromosome | CDS | 2850254 | 1173 | - | 0.532822 |
NA | Rfer_2119 | Extracellular ligand-binding receptor | SubName: Full=Extracellular ligand-binding receptor; Flags: Precursor; | chromosome | CDS | 2295148 | 1131 | + | 0.539346 |
NA | Rfer_0355 | binding-protein-dependent transport systems inner membrane component | SubName: Full=Binding-protein-dependent transport systems inner membrane component; Flags: Precursor; | chromosome | CDS | 356177 | 861 | + | 0.57259 |
NA | Rfer_2947 | histidinol-phosphate aminotransferase | RecName: Full=Histidinol-phosphate aminotransferase; EC=2.6.1.9; AltName: Full=Imidazole acetol-phosphate transaminase; | chromosome | CDS | 3259177 | 1110 | + | 0.613514 |
NA | Rfer_0239 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 236787 | 726 | + | 0.526171 |
NA | Rfer_0683 | asparagine synthase | SubName: Full=Asparagine synthase (Glutamine-hydrolysing); EC=6.3.5.4; | chromosome | CDS | 717401 | 1749 | - | 0.610635 |
NA | Rfer_2952 | Phosphoribosyl-AMP cyclohydrolase | RecName: Full=Phosphoribosyl-AMP cyclohydrolase; Short=PRA-CH; EC=3.5.4.19; | chromosome | CDS | 3263456 | 390 | + | 0.564103 |
NA | Rfer_2129 | binding-protein-dependent transport systems inner membrane component | SubName: Full=Binding-protein-dependent transport systems inner membrane component; Flags: Precursor; | chromosome | CDS | 2307640 | 1035 | + | 0.574879 |
NA | Rfer_2277 | FAD dependent oxidoreductase | SubName: Full=FAD dependent oxidoreductase; | chromosome | CDS | 2498228 | 1461 | - | 0.61191 |
NA | Rfer_3891 | Protein of unknown function DUF160 | SubName: Full=L-lysine 2,3-aminomutase; EC=5.4.3.2; | chromosome | CDS | 4342219 | 1182 | - | 0.603215 |
NA | Rfer_3575 | peptidase M14, carboxypeptidase A | SubName: Full=Peptidase M14, carboxypeptidase A; | chromosome | CDS | 3976825 | 1152 | - | 0.599826 |
NA | Rfer_2324 | extracellular solute-binding protein, family 3 | SubName: Full=Extracellular solute-binding protein, family 3; Flags: Precursor; | chromosome | CDS | 2552272 | 1035 | + | 0.578744 |
NA | Rfer_3499 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; | chromosome | CDS | 3890314 | 876 | + | 0.606164 |
NA | Rfer_1636 | dihydrodipicolinate synthetase | SubName: Full=Dihydrodipicolinate synthetase; | chromosome | CDS | 1767391 | 936 | - | 0.571581 |
NA | Rfer_2326 | Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine | SubName: Full=Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; | chromosome | CDS | 2554626 | 1104 | + | 0.59692 |
NA | Rfer_4066 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 4533706 | 819 | + | 0.652015 |
NA | Rfer_2388 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 2630440 | 780 | - | 0.555128 |
NA | Rfer_3380 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; Flags: Precursor; | chromosome | CDS | 3755527 | 1581 | - | 0.610373 |
NA | Rfer_1567 | 3-phosphoshikimate 1-carboxyvinyltransferase | RecName: Full=3-phosphoshikimate 1-carboxyvinyltransferase; EC=2.5.1.19; | chromosome | CDS | 1692836 | 2010 | - | 0.612438 |
NA | Rfer_0933 | binding-protein-dependent transport systems inner membrane component | SubName: Full=Binding-protein-dependent transport systems inner membrane component; Flags: Precursor; | chromosome | CDS | 982323 | 942 | - | 0.609342 |
NA | Rfer_3244 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 3595786 | 645 | - | 0.646512 |
NA | Rfer_2006 | carbamoyl-phosphate synthase, large subunit | RecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; | chromosome | CDS | 2161639 | 3297 | + | 0.601153 |
NA | Rfer_3604 | Threonine aldolase | SubName: Full=L-threonine aldolase; EC=4.1.2.5; | chromosome | CDS | 4014224 | 1068 | - | 0.650749 |
NA | Rfer_0965 | extracellular solute-binding protein, family 3 | SubName: Full=Extracellular solute-binding protein, family 3; Flags: Precursor; | chromosome | CDS | 1016453 | 843 | + | 0.534994 |
NA | Rfer_0456 | Dihydroxy-acid dehydratase | SubName: Full=L-arabinonate dehydratase; EC=4.2.1.25; | chromosome | CDS | 462257 | 1740 | - | 0.647701 |
NA | Rfer_0882 | thiamine pyrophosphate enzyme-like TPP-binding | SubName: Full=Acetolactate synthase, large subunit; EC=2.2.1.6; | chromosome | CDS | 921249 | 1677 | + | 0.639833 |
NA | Rfer_3367 | phospho-2-dehydro-3-deoxyheptonate aldolase | RecName: Full=Phospho-2-dehydro-3-deoxyheptonate aldolase; EC=2.5.1.54; AltName: Full=3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; AltName: Full=DAHP synthase; AltName: Full=Phospho-2-keto-3-deoxyheptonate aldolase; | chromosome | CDS | 3737822 | 1140 | - | 0.614912 |
NA | Rfer_0466 | 5-methyltetrahydrofolate--homocysteinemethyltran sferase | SubName: Full=Methionine synthase (B12-dependent); EC=2.1.1.13; | chromosome | CDS | 475587 | 2898 | + | 0.6049 |
NA | Rfer_3386 | Gamma-glutamyltransferase | SubName: Full=Gamma-glutamyltransferase 1. Threonine peptidase. MEROPS family T03; EC=2.3.2.2; Flags: Precursor; | chromosome | CDS | 3762955 | 1740 | + | 0.631034 |
NA | Rfer_3016 | putative transmembrane protein | SubName: Full=Putative transmembrane protein; Flags: Precursor; | chromosome | CDS | 3326005 | 912 | - | 0.627193 |
NA | Rfer_2950 | Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase | RecName: Full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; EC=5.3.1.16; AltName: Full=Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; | chromosome | CDS | 3261815 | 741 | + | 0.580297 |
NA | Rfer_2862 | AzlC-like | SubName: Full=AzlC-like; Flags: Precursor; | chromosome | CDS | 3160824 | 747 | + | 0.651941 |
NA | Rfer_0461 | aminotransferase, class IV | SubName: Full=Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase; EC=2.6.1.-; | chromosome | CDS | 471491 | 906 | + | 0.629139 |
NA | Rfer_0352 | extracellular solute-binding protein, family 1 | RecName: Full=Putrescine-binding periplasmic protein; Flags: Precursor; | chromosome | CDS | 352870 | 1170 | + | 0.553846 |
NA | Rfer_1789 | Phosphoribosylanthranilate isomerase | SubName: Full=Phosphoribosylanthranilate isomerase; EC=5.3.1.24; | chromosome | CDS | 1925235 | 735 | - | 0.593197 |
NA | Rfer_0972 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; | chromosome | CDS | 1021985 | 1227 | + | 0.603912 |
NA | Rfer_2810 | Extracellular ligand-binding receptor | SubName: Full=Extracellular ligand-binding receptor; Flags: Precursor; | chromosome | CDS | 3107636 | 1134 | - | 0.561728 |
NA | Rfer_2246 | protein of unknown function DUF6, transmembrane | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2460113 | 903 | + | 0.614618 |
NA | Rfer_0960 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; | chromosome | CDS | 1010162 | 1146 | + | 0.569808 |
NA | Rfer_0818 | Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | SubName: Full=Phosphoserine:homoserine phosphotransferase / homoserine kinase / phosphoserine phosphatase; EC=2.7.1.-; EC=2.7.1.39; EC=3.1.3.3; | chromosome | CDS | 852793 | 606 | + | 0.572607 |
NA | Rfer_2240 | ribose-phosphate pyrophosphokinase | SubName: Full=Ribose-phosphate pyrophosphokinase; EC=2.7.6.1; | chromosome | CDS | 2453073 | 906 | - | 0.620309 |
NA | Rfer_0884 | FAD dependent oxidoreductase | SubName: Full=FAD dependent oxidoreductase; | chromosome | CDS | 924115 | 1134 | - | 0.64903 |
NA | Rfer_2925 | Shikimate kinase | RecName: Full=Shikimate kinase; Short=SK; EC=2.7.1.71; | chromosome | CDS | 3237053 | 540 | + | 0.614815 |
NA | Rfer_0240 | FAD dependent oxidoreductase | SubName: Full=FAD dependent oxidoreductase; Flags: Precursor; | chromosome | CDS | 237561 | 1278 | + | 0.573552 |
NA | Rfer_3105 | binding-protein-dependent transport systems inner membrane component | SubName: Full=Binding-protein-dependent transport systems inner membrane component; | chromosome | CDS | 3444866 | 924 | + | 0.591991 |
NA | Rfer_2633 | Spermidine synthase-like | SubName: Full=Spermidine synthase-like; | chromosome | CDS | 2897194 | 768 | + | 0.575521 |
NA | Rfer_3809 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 4249178 | 723 | + | 0.632089 |
NA | Rfer_1913 | threonine synthase | SubName: Full=L-threonine synthase; EC=4.2.3.1; | chromosome | CDS | 2054196 | 1428 | + | 0.598039 |
NA | Rfer_1953 | binding-protein-dependent transport systems inner membrane component | SubName: Full=Binding-protein-dependent transport systems inner membrane component; | chromosome | CDS | 2097181 | 1005 | - | 0.58607 |
NA | Rfer_1079 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; | chromosome | CDS | 1153859 | 1002 | + | 0.586826 |
NA | Rfer_1026 | dihydrodipicolinate synthetase | SubName: Full=2-dehydro-3-deoxy-L-arabinonate dehydratase; EC=4.2.1.43; | chromosome | CDS | 1085585 | 930 | - | 0.632258 |
NA | Rfer_0700 | Orn/DAP/Arg decarboxylase 2 | SubName: Full=Orn/DAP/Arg decarboxylase 2; Flags: Precursor; | chromosome | CDS | 736703 | 1245 | + | 0.616064 |
NA | Rfer_1080 | protein of unknown function DUF6, transmembrane | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 1154951 | 903 | + | 0.650055 |
NA | Rfer_2044 | succinyl-diaminopimelate desuccinylase | RecName: Full=Succinyl-diaminopimelate desuccinylase; Short=SDAP desuccinylase; EC=3.5.1.18; AltName: Full=N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase; | chromosome | CDS | 2211926 | 1176 | - | 0.626701 |
NA | Rfer_3242 | extracellular solute-binding protein, family 1 | SubName: Full=Extracellular solute-binding protein, family 1; Flags: Precursor; | chromosome | CDS | 3593355 | 1023 | - | 0.569892 |
NA | Rfer_0269 | Extracellular ligand-binding receptor | SubName: Full=Extracellular ligand-binding receptor; Flags: Precursor; | chromosome | CDS | 273660 | 1134 | - | 0.609347 |
NA | Rfer_2130 | binding-protein-dependent transport systems inner membrane component | SubName: Full=Binding-protein-dependent transport systems inner membrane component; | chromosome | CDS | 2308658 | 1140 | + | 0.611404 |
NA | Rfer_2970 | Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine | SubName: Full=Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; | chromosome | CDS | 3276224 | 654 | + | 0.576453 |
NA | Rfer_3726 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 4157850 | 612 | + | 0.647059 |
NA | Rfer_2951 | imidazoleglycerol phosphate synthase, cyclase subunit | RecName: Full=Imidazole glycerol phosphate synthase subunit HisF; EC=4.1.3.-; AltName: Full=IGP synthase cyclase subunit; AltName: Full=IGP synthase subunit HisF; AltName: Full=ImGP synthase subunit HisF; Short=IGPS subunit HisF; | chromosome | CDS | 3262571 | 801 | + | 0.651685 |
NA | Rfer_2464 | FAD dependent oxidoreductase | SubName: Full=FAD dependent oxidoreductase; | chromosome | CDS | 2712460 | 1077 | + | 0.640669 |
NA | Rfer_3170 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 3506602 | 771 | - | 0.584955 |
NA | Rfer_0931 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like | SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; | chromosome | CDS | 980404 | 1065 | - | 0.63662 |
NA | Rfer_2971 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 3276870 | 765 | + | 0.623529 |
NA | Rfer_1788 | tryptophan synthase, beta subunit | RecName: Full=Tryptophan synthase beta chain; EC=4.2.1.20; | chromosome | CDS | 1923935 | 1308 | - | 0.622324 |
NA | Rfer_3460 | cysteine synthases | RecName: Full=Cysteine synthase; EC=2.5.1.47; | chromosome | CDS | 3851321 | 918 | + | 0.619826 |
NA | Rfer_2478 | thiamine pyrophosphate enzyme-like TPP binding protein | SubName: Full=Thiamine pyrophosphate enzyme-like TPP binding protein; | chromosome | CDS | 2728586 | 1758 | - | 0.680319 |
NA | Rfer_3251 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 3604874 | 795 | - | 0.612579 |
NA | Rfer_2552 | Glyoxalase I | SubName: Full=Glyoxalase I; EC=4.4.1.5; | chromosome | CDS | 2810764 | 411 | + | 0.613139 |
NA | Rfer_3107 | peptidase M55, D-aminopeptidase | SubName: Full=D-aminopeptidase DppA. Metallo peptidase. MEROPS family M55; | chromosome | CDS | 3446893 | 819 | + | 0.637363 |
NA | Rfer_3322 | acetolactate synthase, large subunit, biosynthetic type | RecName: Full=Acetolactate synthase; EC=2.2.1.6; | chromosome | CDS | 3686721 | 1824 | + | 0.580592 |
NA | Rfer_2390 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; Flags: Precursor; | chromosome | CDS | 2632509 | 948 | - | 0.570675 |
NA | Rfer_1945 | Twin-arginine translocation pathway signal | SubName: Full=Twin-arginine translocation pathway signal; Flags: Precursor; | chromosome | CDS | 2088235 | 957 | - | 0.656217 |
NA | Rfer_1951 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like | SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; | chromosome | CDS | 2095272 | 969 | - | 0.621259 |
NA | Rfer_2126 | Lysine decarboxylase | SubName: Full=Ornithine decarboxylase; EC=4.1.1.17; | chromosome | CDS | 2302559 | 2289 | + | 0.572302 |
NA | Rfer_2868 | ABC transporter related | SubName: Full=ABC transporter related; Flags: Precursor; | chromosome | CDS | 3168356 | 750 | - | 0.636 |
NA | Rfer_0983 | binding-protein-dependent transport systems inner membrane component | SubName: Full=Binding-protein-dependent transport systems inner membrane component; Flags: Precursor; | chromosome | CDS | 1032325 | 852 | - | 0.664319 |
NA | Rfer_2005 | Lysine exporter protein (LYSE/YGGA) | SubName: Full=Lysine exporter protein (LYSE/YGGA); | chromosome | CDS | 2160872 | 681 | + | 0.609398 |
NA | Rfer_1029 | extracellular solute-binding protein, family 3 | SubName: Full=Extracellular solute-binding protein, family 3; Flags: Precursor; | chromosome | CDS | 1089099 | 798 | - | 0.528822 |
NA | Rfer_2297 | tRNA synthetase, class II (G, H, P and S) | RecName: Full=ATP phosphoribosyltransferase regulatory subunit; | chromosome | CDS | 2520508 | 1149 | - | 0.609225 |
NA | Rfer_0976 | Ornithine cyclodeaminase | SubName: Full=Ornithine cyclodeaminase; EC=4.3.1.12; | chromosome | CDS | 1025027 | 972 | - | 0.638889 |
NA | Rfer_0232 | extracellular solute-binding protein, family 3 | SubName: Full=Extracellular solute-binding protein, family 3; Flags: Precursor; | chromosome | CDS | 231496 | 747 | + | 0.579652 |
NA | Rfer_1521 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 1638346 | 777 | - | 0.598456 |
NA | Rfer_2380 | Isocitrate dehydrogenase (NAD+) | SubName: Full=Isocitrate dehydrogenase (NAD+); EC=1.1.1.41; | chromosome | CDS | 2620344 | 1035 | + | 0.639614 |
NA | Rfer_3524 | acetylglutamate kinase | RecName: Full=Acetylglutamate kinase; EC=2.7.2.8; AltName: Full=N-acetyl-L-glutamate 5-phosphotransferase; AltName: Full=NAG kinase; Short=AGK; | chromosome | CDS | 3920254 | 891 | - | 0.588103 |
NA | Rfer_2345 | 2-isopropylmalate synthase | RecName: Full=2-isopropylmalate synthase; EC=2.3.3.13; AltName: Full=Alpha-IPM synthase; AltName: Full=Alpha-isopropylmalate synthase; | chromosome | CDS | 2577798 | 1539 | + | 0.564652 |
NA | Rfer_2294 | Cys/Met metabolism pyridoxal-phosphate-dependent enzymes | SubName: Full=Cystathionine beta-lyase; EC=4.4.1.8; | chromosome | CDS | 2517257 | 1209 | - | 0.635236 |
NA | Rfer_3103 | extracellular solute-binding protein, family 5 | SubName: Full=Extracellular solute-binding protein, family 5; Flags: Precursor; | chromosome | CDS | 3442293 | 1560 | + | 0.557692 |
NA | Rfer_0460 | 5-methyltetrahydrofolate--homocysteineS-methyltr ansferase | SubName: Full=Methionine synthase (B12-dependent); EC=2.1.1.13; | chromosome | CDS | 470422 | 1047 | + | 0.638013 |
NA | Rfer_1794 | 3-isopropylmalate dehydratase, small subunit | RecName: Full=3-isopropylmalate dehydratase small subunit; EC=4.2.1.33; AltName: Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate isomerase; | chromosome | CDS | 1932136 | 651 | - | 0.56682 |
NA | Rfer_0346 | agmatinase, putative | SubName: Full=Agmatinase; EC=3.5.3.11; | chromosome | CDS | 345267 | 921 | + | 0.635179 |
NA | Rfer_0237 | Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine | SubName: Full=Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; Flags: Precursor; | chromosome | CDS | 235386 | 669 | + | 0.55157 |
NA | Rfer_4053 | FAD dependent oxidoreductase | SubName: Full=FAD dependent oxidoreductase; | chromosome | CDS | 4517375 | 1170 | - | 0.679487 |
NA | Rfer_0596 | binding-protein-dependent transport systems inner membrane component | SubName: Full=Binding-protein-dependent transport systems inner membrane component; Flags: Precursor; | chromosome | CDS | 622066 | 846 | + | 0.612293 |
NA | Rfer_0932 | binding-protein-dependent transport systems inner membrane component | SubName: Full=Binding-protein-dependent transport systems inner membrane component; Flags: Precursor; | chromosome | CDS | 981479 | 840 | - | 0.610714 |
NA | Rfer_3225 | binding-protein-dependent transport systems inner membrane component | SubName: Full=Binding-protein-dependent transport systems inner membrane component; Flags: Precursor; | chromosome | CDS | 3572551 | 873 | + | 0.619702 |
NA | Rfer_0593 | spermidine/putrescine ABC transporter ATP-binding subunit | SubName: Full=Spermidine/putrescine ABC transporter ATP-binding subunit; | chromosome | CDS | 618556 | 1083 | + | 0.606648 |
NA | Rfer_3567 | 2-keto-3-deoxygluconate permease | RecName: Full=2-keto-3-deoxygluconate permease; Short=KDG permease; | chromosome | CDS | 3965937 | 975 | - | 0.578462 |
NA | Rfer_4064 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; | chromosome | CDS | 4531423 | 1038 | + | 0.632948 |
NA | Rfer_4062 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 4529585 | 870 | + | 0.629885 |
NA | Rfer_0158 | Amidase, hydantoinase/carbamoylase | SubName: Full=Amidase, hydantoinase/carbamoylase; EC=3.5.1.87; | chromosome | CDS | 157597 | 1272 | - | 0.670597 |
NA | Rfer_0968 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 1018771 | 771 | + | 0.508431 |
NA | Rfer_2391 | extracellular ligand-binding receptor | SubName: Full=Extracellular ligand-binding receptor; Flags: Precursor; | chromosome | CDS | 2633597 | 1236 | - | 0.556634 |
NA | Rfer_1787 | tryptophan synthase, alpha subunit | RecName: Full=Tryptophan synthase alpha chain; EC=4.2.1.20; | chromosome | CDS | 1923117 | 822 | - | 0.63017 |
NA | Rfer_0371 | Extracellular ligand-binding receptor | SubName: Full=Extracellular ligand-binding receptor; Flags: Precursor; | chromosome | CDS | 377600 | 1152 | + | 0.625 |
NA | Rfer_2208 | Oligopeptidase A | SubName: Full=Oligopeptidase A. Metallo peptidase. MEROPS family M03A; EC=3.4.24.70; | chromosome | CDS | 2413446 | 2040 | - | 0.614216 |
NA | Rfer_3223 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 3570495 | 1155 | + | 0.629437 |
NA | Rfer_1247 | 3-dehydroquinate synthase | SubName: Full=3-dehydroquinate synthase; EC=4.2.3.4; | chromosome | CDS | 1341579 | 1071 | + | 0.439776 |
NA | Rfer_2174 | Aspartate transaminase | SubName: Full=Aminotransferase; EC=2.6.1.-; | chromosome | CDS | 2372127 | 1197 | - | 0.591479 |
NA | Rfer_3694 | Histidinol-phosphate phosphatase | RecName: Full=D,D-heptose 1,7-bisphosphate phosphatase; EC=3.1.3.-; | chromosome | CDS | 4126158 | 597 | - | 0.61474 |
NA | Rfer_1220 | Drug resistance transporter Bcr/CflA subfamily | SubName: Full=Drug resistance transporter Bcr/CflA subfamily; | chromosome | CDS | 1306461 | 1239 | + | 0.615012 |
NA | Rfer_1921 | dihydroxy-acid dehydratase | RecName: Full=Dihydroxy-acid dehydratase; Short=DAD; EC=4.2.1.9; | chromosome | CDS | 2062504 | 1695 | - | 0.614749 |
NA | Rfer_3160 | O-acetylhomoserine/O-acetylserine sulfhydrylase | SubName: Full=O-acetylhomoserine/O-acetylserine sulfhydrylase; EC=2.5.1.49; | chromosome | CDS | 3495906 | 1302 | - | 0.645161 |
NA | Rfer_0785 | putative spermidine synthase | SubName: Full=Putative spermidine synthase; | chromosome | CDS | 823326 | 2280 | + | 0.624123 |
NA | Rfer_1952 | binding-protein-dependent transport systems inner membrane component | SubName: Full=Binding-protein-dependent transport systems inner membrane component; | chromosome | CDS | 2096264 | 909 | - | 0.618262 |
NA | Rfer_4063 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; | chromosome | CDS | 4530454 | 879 | + | 0.640501 |
NA | Rfer_3621 | protein of unknown function DUF6, transmembrane | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4037623 | 960 | + | 0.641667 |
NA | Rfer_3541 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 3937249 | 783 | - | 0.565773 |
NA | Rfer_0592 | 4-aminobutyrate aminotransferase | SubName: Full=4-aminobutyrate aminotransferase; EC=2.6.1.19; | chromosome | CDS | 617152 | 1299 | + | 0.616628 |
NA | Rfer_1031 | Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine | SubName: Full=Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; | chromosome | CDS | 1090627 | 645 | - | 0.491473 |
NA | Rfer_3679 | pyrroline-5-carboxylate reductase | RecName: Full=Pyrroline-5-carboxylate reductase; EC=1.5.1.2; | chromosome | CDS | 4099344 | 816 | + | 0.647059 |
NA | Rfer_0856 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; Flags: Precursor; | chromosome | CDS | 893032 | 1194 | - | 0.608878 |
NA | Rfer_2996 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding | SubName: Full=D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; | chromosome | CDS | 3302639 | 1014 | + | 0.607495 |
NA | Rfer_2949 | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit | RecName: Full=Imidazole glycerol phosphate synthase subunit HisH; EC=2.4.2.-; AltName: Full=IGP synthase glutamine amidotransferase subunit; AltName: Full=IGP synthase subunit HisH; AltName: Full=ImGP synthase subunit HisH; | chromosome | CDS | 3260987 | 684 | + | 0.600877 |
NA | Rfer_1001 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 1055044 | 807 | + | 0.627014 |
NA | Rfer_1013 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; | chromosome | CDS | 1069452 | 897 | + | 0.583055 |
NA | Rfer_3314 | Anthranilate synthase component I and chorismate binding protein | SubName: Full=Anthranilate synthase component I and chorismate binding protein; | chromosome | CDS | 3678275 | 1848 | - | 0.662879 |
NA | Rfer_2458 | Phosphoadenylyl-sulfate reductase (thioredoxin) | SubName: Full=Phosphoadenylylsulfate reductase (Thioredoxin); EC=1.8.4.8; | chromosome | CDS | 2706289 | 762 | + | 0.61811 |
NA | Rfer_3729 | aminotransferase, class I and II | SubName: Full=Aminotransferase, class I and II; | chromosome | CDS | 4160156 | 1263 | + | 0.650831 |
NA | Rfer_1048 | Peptidyl-dipeptidase Dcp | SubName: Full=Peptidyl-dipeptidase Dcp. Metallo peptidase. MEROPS family M03A; EC=3.4.15.5; | chromosome | CDS | 1110315 | 2064 | + | 0.614341 |
NA | Rfer_3161 | Chorismate synthase | RecName: Full=Chorismate synthase; EC=4.2.3.5; AltName: Full=5-enolpyruvylshikimate-3-phosphate phospholyase; | chromosome | CDS | 3497299 | 1095 | + | 0.580822 |
NA | Rfer_1520 | Pyridoxal-5'-phosphate-dependent enzyme, beta subunit | SubName: Full=Pyridoxal-5-phosphate-dependent enzyme, beta subunit; | chromosome | CDS | 1637295 | 1044 | - | 0.64272 |
NA | Rfer_1012 | Extracellular ligand-binding receptor | SubName: Full=Extracellular ligand-binding receptor; Flags: Precursor; | chromosome | CDS | 1068094 | 1317 | + | 0.594533 |
NA | Rfer_3444 | Diaminopimelate epimerase | RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7; | chromosome | CDS | 3833652 | 876 | - | 0.623288 |
NA | Rfer_3113 | Lysine exporter protein (LYSE/YGGA) | SubName: Full=Lysine exporter protein (LYSE/YGGA); | chromosome | CDS | 3451333 | 630 | - | 0.644444 |
NA | Rfer_2933 | Glutamate synthase (ferredoxin) | SubName: Full=Glutamate synthase (NADH) large subunit; EC=1.4.1.14; | chromosome | CDS | 3243614 | 4734 | + | 0.613435 |
NA | Rfer_2945 | ATP phosphoribosyltransferase | RecName: Full=ATP phosphoribosyltransferase; Short=ATP-PRT; Short=ATP-PRTase; EC=2.4.2.17; | chromosome | CDS | 3257180 | 639 | + | 0.597809 |
NA | Rfer_1936 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2078899 | 291 | + | 0.556701 |
NA | Rfer_4176 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; | chromosome | CDS | 4645914 | 1278 | + | 0.606416 |
NA | Rfer_2378 | cysteine synthase B | RecName: Full=Cysteine synthase; EC=2.5.1.47; | chromosome | CDS | 2618753 | 903 | - | 0.554817 |
NA | Rfer_1523 | Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine | SubName: Full=Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; Flags: Precursor; | chromosome | CDS | 1640310 | 714 | - | 0.631653 |
NA | Rfer_0597 | agmatinase, putative | SubName: Full=Agmatinase; EC=3.5.3.11; | chromosome | CDS | 622914 | 948 | + | 0.631857 |
NA | Rfer_3605 | glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase | SubName: Full=Anthranilate synthase, component II; EC=4.1.3.27; | chromosome | CDS | 4015393 | 627 | - | 0.602871 |
NA | Rfer_3237 | protein of unknown function DUF6, transmembrane | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 3587791 | 903 | + | 0.604651 |
NA | Rfer_2046 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylateN-su ccinyltransferase | RecName: Full=2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; EC=2.3.1.117; AltName: Full=Tetrahydrodipicolinate N-succinyltransferase; Short=THDP succinyltransferase; Short=THP succinyltransferase; Short=Tetrahydropicolinate succinylase; | chromosome | CDS | 2214350 | 825 | - | 0.620606 |
NA | Rfer_3652 | Asparagine synthase, glutamine-hydrolyzing | RecName: Full=Asparagine synthetase; EC=6.3.5.4; | chromosome | CDS | 4069150 | 1788 | + | 0.621924 |
NA | Rfer_3602 | anthranilate phosphoribosyltransferase | RecName: Full=Anthranilate phosphoribosyltransferase; EC=2.4.2.18; | chromosome | CDS | 4012872 | 1053 | - | 0.616334 |
NA | Rfer_2801 | lactoylglutathione lyase | SubName: Full=Lactoylglutathione lyase; | chromosome | CDS | 3096743 | 510 | - | 0.592157 |
NA | Rfer_0889 | ABC transporter related | SubName: Full=ABC transporter related; Flags: Precursor; | chromosome | CDS | 928589 | 1107 | - | 0.601626 |
NA | Rfer_2389 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; Flags: Precursor; | chromosome | CDS | 2631216 | 1290 | - | 0.555814 |
NA | Rfer_3400 | urease, beta subunit | RecName: Full=Urease subunit beta; EC=3.5.1.5; AltName: Full=Urea amidohydrolase subunit beta; | chromosome | CDS | 3786277 | 306 | + | 0.653595 |
NA | Rfer_1327 | O-acetylhomoserine/O-acetylserine sulfhydrylase | SubName: Full=O-acetylhomoserine/O-acetylserine sulfhydrylase; EC=2.5.1.47; | chromosome | CDS | 1425493 | 1278 | - | 0.640063 |
NA | Rfer_1987 | D-amino-acid dehydrogenase | SubName: Full=D-amino-acid dehydrogenase; EC=1.4.99.1; | chromosome | CDS | 2142097 | 1227 | - | 0.645477 |
NA | Rfer_0755 | Dihydrodipicolinate reductase | RecName: Full=4-hydroxy-tetrahydrodipicolinate reductase; Short=HTPA reductase; EC=1.17.1.8; | chromosome | CDS | 789482 | 816 | + | 0.609069 |
NA | Rfer_3649 | methionine gamma-lyase | SubName: Full=Methionine gamma-lyase; EC=4.4.1.11; | chromosome | CDS | 4063828 | 1257 | + | 0.645983 |
NA | Rfer_3815 | Extracellular ligand-binding receptor | SubName: Full=Extracellular ligand-binding receptor; Flags: Precursor; | chromosome | CDS | 4259340 | 1107 | + | 0.576332 |
NA | Rfer_0290 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; | chromosome | CDS | 292811 | 978 | + | 0.637014 |
NA | Rfer_0406 | homoserine O-acetyltransferase | RecName: Full=Homoserine O-acetyltransferase; EC=2.3.1.31; AltName: Full=Homoserine O-trans-acetylase; | chromosome | CDS | 412017 | 1143 | - | 0.615923 |
NA | Rfer_0671 | Asparagine synthase, glutamine-hydrolyzing | RecName: Full=Asparagine synthetase; EC=6.3.5.4; | chromosome | CDS | 698304 | 1860 | + | 0.590323 |
NA | Rfer_2325 | Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine | SubName: Full=Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; | chromosome | CDS | 2553435 | 1176 | + | 0.584184 |
NA | Rfer_0595 | binding-protein-dependent transport systems inner membrane component | SubName: Full=Binding-protein-dependent transport systems inner membrane component; Flags: Precursor; | chromosome | CDS | 620750 | 1242 | + | 0.625604 |
NA | Rfer_0982 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like | SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; | chromosome | CDS | 1031324 | 1005 | - | 0.677612 |
NA | Rfer_0518 | thiamine pyrophosphate enzyme-like TPP binding protein | SubName: Full=Phenylpyruvate decarboxylase; EC=4.1.1.43; | chromosome | CDS | 541203 | 1623 | + | 0.632163 |
NA | Rfer_3324 | ketol-acid reductoisomerase | RecName: Full=Ketol-acid reductoisomerase; EC=1.1.1.86; AltName: Full=Acetohydroxy-acid isomeroreductase; AltName: Full=Alpha-keto-beta-hydroxylacyl reductoisomerase; | chromosome | CDS | 3689147 | 1017 | + | 0.559489 |
NA | Rfer_3106 | peptidase S58, DmpA | SubName: Full=Aminopeptidase DmpA. Serine peptidase. MEROPS family S58; | chromosome | CDS | 3445802 | 1095 | + | 0.626484 |
NA | Rfer_3002 | protein of unknown function DUF6, transmembrane | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 3309828 | 897 | + | 0.649944 |
NA | Rfer_1248 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding | SubName: Full=D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; | chromosome | CDS | 1342646 | 933 | + | 0.494105 |
NA | Rfer_2475 | Tryptophanase | SubName: Full=Tryptophanase; EC=4.1.99.1; | chromosome | CDS | 2721515 | 1371 | - | 0.603209 |
NA | Rfer_2116 | Leucyl aminopeptidase | RecName: Full=Probable cytosol aminopeptidase; EC=3.4.11.1; AltName: Full=Leucine aminopeptidase; Short=LAP; EC=3.4.11.10; AltName: Full=Leucyl aminopeptidase; | chromosome | CDS | 2292828 | 1440 | + | 0.586111 |
NA | Rfer_0210 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 207965 | 714 | - | 0.656863 |
NA | Rfer_2025 | putative carboxypeptidase | SubName: Full=Putative carboxypeptidase; | chromosome | CDS | 2184823 | 1122 | + | 0.57041 |
NA | Rfer_1002 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 1055847 | 717 | + | 0.630404 |
NA | Rfer_1524 | Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine | SubName: Full=Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; Flags: Precursor; | chromosome | CDS | 1641023 | 690 | - | 0.585507 |
NA | Rfer_0162 | Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine | SubName: Full=Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; Flags: Precursor; | chromosome | CDS | 162015 | 663 | + | 0.630468 |
NA | Rfer_2498 | transglutaminase-like | SubName: Full=Transglutaminase-like; | chromosome | CDS | 2760506 | 993 | + | 0.598187 |
NA | Rfer_1271 | glutamate 5-kinase | RecName: Full=Glutamate 5-kinase; EC=2.7.2.11; AltName: Full=Gamma-glutamyl kinase; Short=GK; | chromosome | CDS | 1364185 | 1137 | + | 0.635004 |
NA | Rfer_2327 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 2555757 | 759 | + | 0.565217 |
NA | Rfer_3210 | protein of unknown function DUF6, transmembrane | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3556818 | 930 | - | 0.62043 |
NA | Rfer_0165 | Amidase, hydantoinase/carbamoylase | SubName: Full=Amidase, hydantoinase/carbamoylase; EC=3.5.1.87; | chromosome | CDS | 164145 | 1785 | + | 0.621289 |
NA | Rfer_2934 | glutamate synthases, NADH/NADPH, small subunit | SubName: Full=Glutamate synthase (NADH) small subunit; EC=1.4.1.14; | chromosome | CDS | 3248359 | 1467 | + | 0.612134 |
NA | Rfer_1568 | Prephenate dehydrogenase | SubName: Full=Prephenate dehydrogenase; EC=1.3.1.12; Flags: Precursor; | chromosome | CDS | 1694845 | 873 | - | 0.611684 |
NA | Rfer_2097 | dihydrodipicolinate synthase | RecName: Full=4-hydroxy-tetrahydrodipicolinate synthase; Short=HTPA synthase; EC=4.3.3.7; | chromosome | CDS | 2271011 | 894 | - | 0.589485 |
NA | Rfer_0314 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; | chromosome | CDS | 313865 | 1212 | + | 0.544554 |
NA | Rfer_1857 | binding-protein-dependent transport systems inner membrane component | SubName: Full=Binding-protein-dependent transport systems inner membrane component; | chromosome | CDS | 1998597 | 771 | + | 0.671855 |
NA | Rfer_0350 | Glutamate--ammonia ligase | SubName: Full=L-glutamine synthetase; EC=6.3.1.2; | chromosome | CDS | 349914 | 1368 | + | 0.579678 |
NA | Rfer_3101 | peptidase T2, asparaginase 2 | SubName: Full=Peptidase T2, asparaginase 2; Flags: Precursor; | chromosome | CDS | 3439267 | 987 | + | 0.632219 |
NA | Rfer_1032 | Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine | SubName: Full=Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; | chromosome | CDS | 1091283 | 684 | - | 0.539474 |
NA | Rfer_0981 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like | SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; | chromosome | CDS | 1030341 | 987 | - | 0.661601 |
NA | Rfer_4160 | extracellular solute-binding protein, family 3 | SubName: Full=Extracellular solute-binding protein, family 3; Flags: Precursor; | chromosome | CDS | 4630757 | 744 | - | 0.564516 |
NA | Rfer_3169 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 3505840 | 717 | - | 0.563459 |
NA | Rfer_0881 | aminotransferase, class I and II | SubName: Full=Aminotransferase; EC=2.6.1.-; | chromosome | CDS | 920015 | 1209 | + | 0.640199 |
NA | Rfer_2804 | LAO/AO transport system ATPase | SubName: Full=LAO/AO transport system ATPase; | chromosome | CDS | 3101258 | 1059 | - | 0.610954 |
NA | Rfer_1570 | phosphoserine aminotransferase | RecName: Full=Phosphoserine aminotransferase; EC=2.6.1.52; AltName: Full=Phosphohydroxythreonine aminotransferase; Short=PSAT; | chromosome | CDS | 1696847 | 1113 | - | 0.629829 |
NA | Rfer_1261 | Serine acetyltransferase-like | RecName: Full=Serine acetyltransferase; EC=2.3.1.30; | chromosome | CDS | 1355696 | 585 | + | 0.533333 |
NA | Rfer_2658 | Glycine hydroxymethyltransferase | RecName: Full=Serine hydroxymethyltransferase; Short=SHMT; Short=Serine methylase; EC=2.1.2.1; | chromosome | CDS | 2925402 | 1245 | + | 0.578313 |
NA | Rfer_1698 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; | chromosome | CDS | 1826942 | 1284 | + | 0.614486 |
NA | Rfer_3378 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 3753547 | 876 | - | 0.626712 |
NA | Rfer_3379 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; | chromosome | CDS | 3754419 | 1104 | - | 0.60779 |
NA | Rfer_1956 | protein of unknown function DUF6, transmembrane | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2099426 | 957 | - | 0.580982 |
NA | Rfer_0238 | Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine | SubName: Full=Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; | chromosome | CDS | 236065 | 651 | + | 0.549923 |
NA | Rfer_3500 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; | chromosome | CDS | 3891186 | 1077 | + | 0.6026 |
NA | Rfer_0966 | Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine | SubName: Full=Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; | chromosome | CDS | 1017422 | 663 | + | 0.555053 |
NA | Rfer_2510 | HAD-superfamily subfamily IB, PSPase-like | SubName: Full=HAD-superfamily subfamily IB, PSPase-like; | chromosome | CDS | 2772740 | 675 | - | 0.586667 |
NA | Rfer_0159 | Diaminopropionate ammonia-lyase | SubName: Full=Diaminopropionate ammonia-lyase; | chromosome | CDS | 158865 | 1233 | - | 0.684509 |
NA | Rfer_3599 | translation elongation factor Tu | RecName: Full=Elongation factor Tu 1; Short=EF-Tu 1; | chromosome | CDS | 4009644 | 1191 | - | 0.596977 |
NA | Rfer_0467 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; | chromosome | CDS | 478488 | 1212 | - | 0.671617 |
NA | Rfer_0803 | ferredoxin-dependent glutamate synthase | SubName: Full=Ferredoxin-dependent glutamate synthase; Flags: Precursor; | chromosome | CDS | 840078 | 1626 | - | 0.646371 |
NA | Rfer_0164 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 163336 | 759 | + | 0.625823 |
NA | Rfer_0486 | protein of unknown function DUF6, transmembrane | SubName: Full=Uncharacterized protein; | chromosome | CDS | 502253 | 939 | - | 0.661342 |
NA | Rfer_2424 | lipolytic enzyme, G-D-S-L | SubName: Full=Lipolytic enzyme, G-D-S-L; | chromosome | CDS | 2674009 | 537 | - | 0.608939 |
NA | Rfer_3171 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; Flags: Precursor; | chromosome | CDS | 3507369 | 1092 | - | 0.582418 |
NA | Rfer_2047 | aminotransferase, class I and II | SubName: Full=Succinyldiaminopimelate aminotransferase; EC=2.6.1.11; | chromosome | CDS | 2215210 | 1230 | - | 0.638211 |
NA | Rfer_0348 | transcriptional regulator, GntR family | SubName: Full=Transcriptional regulator, GntR family; | chromosome | CDS | 347496 | 1488 | - | 0.607527 |
NA | Rfer_2443 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; | chromosome | CDS | 2689645 | 1446 | + | 0.571923 |
NA | Rfer_3208 | oxidoreductase FAD/NAD(P)-binding | SubName: Full=Sulfide dehydrogenase (Flavoprotein) subunit SudB / sulfide dehydrogenase (Flavoprotein) subunit SudA; EC=1.97.-.-; | chromosome | CDS | 3548554 | 2844 | - | 0.632911 |
NA | Rfer_3020 | glycine cleavage system H protein | RecName: Full=Glycine cleavage system H protein; | chromosome | CDS | 3331146 | 375 | + | 0.616 |
NA | Rfer_1206 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; | chromosome | CDS | 1292342 | 1227 | + | 0.597392 |
NA | Rfer_2926 | 3-dehydroquinate synthase | RecName: Full=3-dehydroquinate synthase; EC=4.2.3.4; | chromosome | CDS | 3237589 | 1107 | + | 0.617886 |
NA | Rfer_2387 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 2629751 | 696 | - | 0.531609 |
NA | Rfer_1016 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 1072074 | 675 | + | 0.591111 |
NA | Rfer_2844 | selenide, water dikinase | RecName: Full=Selenide, water dikinase; EC=2.7.9.3; AltName: Full=Selenium donor protein; AltName: Full=Selenophosphate synthase; | chromosome | CDS | 3141193 | 1110 | - | 0.647748 |
NA | Rfer_2890 | serine O-acetyltransferase | RecName: Full=Serine acetyltransferase; EC=2.3.1.30; | chromosome | CDS | 3192348 | 774 | - | 0.624031 |
NA | Rfer_1329 | phosphoserine phosphatase SerB | SubName: Full=Phosphoserine phosphatase; EC=3.1.3.3; | chromosome | CDS | 1428373 | 714 | - | 0.619048 |
NA | Rfer_1003 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; Flags: Precursor; | chromosome | CDS | 1056576 | 873 | + | 0.60252 |
NA | Rfer_0127 | Allophanate hydrolase subunit 1 | SubName: Full=Allophanate hydrolase subunit 1; | chromosome | CDS | 131605 | 885 | - | 0.518644 |
NA | Rfer_0410 | protein of unknown function DUF6, transmembrane | SubName: Full=Uncharacterized protein; | chromosome | CDS | 416735 | 942 | + | 0.653928 |
NA | Rfer_1660 | ribose-phosphate pyrophosphokinase | RecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; | chromosome | CDS | 1791716 | 978 | + | 0.554192 |
NA | Rfer_3502 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 3893104 | 798 | + | 0.614035 |
NA | Rfer_4199 | pyruvate carboxyltransferase | SubName: Full=Hydroxymethylglutaryl-CoA lyase; EC=4.1.3.4; | chromosome | CDS | 4668790 | 927 | + | 0.619202 |
NA | Rfer_3413 | shikimate 5-dehydrogenase | RecName: Full=Shikimate dehydrogenase; EC=1.1.1.25; | chromosome | CDS | 3797736 | 876 | + | 0.646119 |
NA | Rfer_2879 | putative transmembrane protein | SubName: Full=Putative transmembrane protein; | chromosome | CDS | 3181442 | 888 | + | 0.628378 |
NA | Rfer_0591 | transcriptional regulator, GntR family | SubName: Full=Transcriptional regulator, GntR family; | chromosome | CDS | 615614 | 1395 | - | 0.615054 |
NA | Rfer_2411 | Isocitrate dehydrogenase (NAD+) | SubName: Full=Isocitrate dehydrogenase (NAD+); EC=1.1.1.41; | chromosome | CDS | 2653021 | 1038 | - | 0.635838 |
NA | Rfer_1516 | Drug resistance transporter EmrB/QacA subfamily | SubName: Full=Drug resistance transporter EmrB/QacA subfamily; | chromosome | CDS | 1633008 | 1584 | + | 0.611742 |
NA | Rfer_1536 | Drug resistance transporter Bcr/CflA subfamily | SubName: Full=Drug resistance transporter Bcr/CflA subfamily; | chromosome | CDS | 1652901 | 1227 | - | 0.653627 |
NA | Rfer_1856 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 1997668 | 933 | + | 0.628081 |
NA | Rfer_1836 | ABC transporter related | SubName: Full=ABC transporter related; Flags: Precursor; | chromosome | CDS | 1973520 | 1947 | - | 0.581921 |
NA | Rfer_2703 | Peptidase M1, alanyl aminopeptidase | SubName: Full=Alanyl aminopeptidase. Metallo peptidase. MEROPS family M01; | chromosome | CDS | 2973851 | 2715 | + | 0.630939 |
NA | Rfer_0186 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; Flags: Precursor; | chromosome | CDS | 183947 | 1272 | + | 0.643082 |
NA | Rfer_0733 | threonine dehydratase, biosynthetic | SubName: Full=L-threonine ammonia-lyase; EC=4.3.1.19; | chromosome | CDS | 771855 | 1548 | + | 0.614341 |
NA | Rfer_1004 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; Flags: Precursor; | chromosome | CDS | 1057452 | 1002 | + | 0.632735 |
NA | Rfer_4158 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 4629310 | 765 | - | 0.605229 |
NA | Rfer_3946 | N-acetyl-gamma-glutamyl-phosphate reductase | RecName: Full=N-acetyl-gamma-glutamyl-phosphate reductase; Short=AGPR; EC=1.2.1.38; AltName: Full=N-acetyl-glutamate semialdehyde dehydrogenase; | chromosome | CDS | 4413622 | 936 | + | 0.637821 |
NA | Rfer_0506 | branched-chain amino acid aminotransferase | SubName: Full=Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / branched chain amino acid aminotransferase; EC=2.6.1.-; EC=2.6.1.42; | chromosome | CDS | 525352 | 951 | + | 0.575184 |
NA | Rfer_1792 | aspartate-semialdehyde dehydrogenase | RecName: Full=Aspartate-semialdehyde dehydrogenase; Short=ASA dehydrogenase; Short=ASADH; EC=1.2.1.11; AltName: Full=Aspartate-beta-semialdehyde dehydrogenase; | chromosome | CDS | 1929673 | 1140 | - | 0.591228 |
NA | Rfer_2101 | FAD dependent oxidoreductase | RecName: Full=tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein; Includes: RecName: Full=tRNA (mnm(5)s(2)U34)-methyltransferase; EC=2.1.1.61; Includes: RecName: Full=FAD-dependent cmnm(5)s(2)U34 oxidoreductase; EC=1.5.-.-; | chromosome | CDS | 2274708 | 1830 | - | 0.625137 |
NA | Rfer_0888 | binding-protein-dependent transport systems inner membrane component | SubName: Full=Binding-protein-dependent transport systems inner membrane component; Flags: Precursor; | chromosome | CDS | 927738 | 855 | - | 0.618713 |
NA | Rfer_1946 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; | chromosome | CDS | 2089331 | 1263 | + | 0.61441 |
NA | Rfer_3409 | peptidase T2, asparaginase 2 | SubName: Full=Peptidase T2, asparaginase 2; | chromosome | CDS | 3793348 | 828 | - | 0.608696 |
NA | Rfer_1793 | 3-isopropylmalate dehydrogenase | RecName: Full=3-isopropylmalate dehydrogenase; EC=1.1.1.85; AltName: Full=3-IPM-DH; AltName: Full=Beta-IPM dehydrogenase; Short=IMDH; | chromosome | CDS | 1931031 | 1071 | - | 0.615313 |
NA | Rfer_3021 | glycine dehydrogenase | RecName: Full=Glycine dehydrogenase (decarboxylating); EC=1.4.4.2; AltName: Full=Glycine cleavage system P-protein; AltName: Full=Glycine decarboxylase; AltName: Full=Glycine dehydrogenase (aminomethyl-transferring); | chromosome | CDS | 3331610 | 2904 | + | 0.62741 |
NA | Rfer_1912 | Homoserine dehydrogenase | RecName: Full=Homoserine dehydrogenase; EC=1.1.1.3; | chromosome | CDS | 2052838 | 1359 | + | 0.608536 |
NA | Rfer_3883 | Ornithine cyclodeaminase | SubName: Full=Ornithine cyclodeaminase; EC=4.3.1.12; | chromosome | CDS | 4334157 | 1110 | + | 0.618919 |
NA | Rfer_0594 | extracellular solute-binding protein, family 1 | SubName: Full=Extracellular solute-binding protein, family 1; Flags: Precursor; | chromosome | CDS | 619697 | 1032 | + | 0.591085 |
NA | Rfer_4139 | Methionine gamma-lyase | SubName: Full=Methionine gamma-lyase; EC=4.4.1.11; | chromosome | CDS | 4611688 | 1173 | - | 0.656437 |
NA | Rfer_2167 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; | chromosome | CDS | 2362300 | 1212 | + | 0.633663 |
NA | Rfer_1408 | histidinol-phosphate aminotransferase | RecName: Full=Histidinol-phosphate aminotransferase; EC=2.6.1.9; AltName: Full=Imidazole acetol-phosphate transaminase; | chromosome | CDS | 1516984 | 1113 | + | 0.602875 |
NA | Rfer_0472 | nitrogen regulatory protein P-II | SubName: Full=Nitrogen regulatory protein P-II; | chromosome | CDS | 487365 | 339 | + | 0.581121 |
NA | Rfer_0985 | extracellular solute-binding protein, family 5 | SubName: Full=Extracellular solute-binding protein, family 5; Flags: Precursor; | chromosome | CDS | 1034175 | 1536 | - | 0.613932 |
NA | Rfer_0649 | protein of unknown function DUF6, transmembrane | SubName: Full=Uncharacterized protein; | chromosome | CDS | 673175 | 918 | - | 0.563181 |
NA | Rfer_2531 | transglutaminase-like | SubName: Full=Transglutaminase-like; | chromosome | CDS | 2790165 | 2022 | + | 0.679525 |
NA | Rfer_1037 | aminotransferase, class IV | SubName: Full=Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase; EC=2.6.1.-; | chromosome | CDS | 1096537 | 882 | - | 0.589569 |
NA | Rfer_3745 | protein of unknown function DUF6, transmembrane | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 4177510 | 897 | - | 0.662207 |
NA | Rfer_1077 | extracellular ligand-binding receptor | SubName: Full=Extracellular ligand-binding receptor; Flags: Precursor; | chromosome | CDS | 1151700 | 1194 | + | 0.590452 |
NA | Rfer_2800 | 4Fe-4S ferredoxin, iron-sulfur binding | SubName: Full=4Fe-4S ferredoxin, iron-sulfur binding; | chromosome | CDS | 3094754 | 1827 | - | 0.584018 |
NA | Rfer_2916 | diaminopimelate decarboxylase | RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase; Short=DAPDC; EC=4.1.1.20; | chromosome | CDS | 3225572 | 1302 | - | 0.601382 |
NA | Rfer_3230 | Extracellular ligand-binding receptor | SubName: Full=Extracellular ligand-binding receptor; Flags: Precursor; | chromosome | CDS | 3578039 | 1203 | - | 0.615129 |
NA | Rfer_0284 | protein of unknown function DUF6, transmembrane | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 287927 | 891 | + | 0.606061 |
NA | Rfer_3399 | urease, gamma subunit | RecName: Full=Urease subunit gamma; EC=3.5.1.5; AltName: Full=Urea amidohydrolase subunit gamma; | chromosome | CDS | 3785958 | 303 | + | 0.594059 |
NA | Rfer_1756 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; | chromosome | CDS | 1889588 | 1224 | + | 0.669935 |
NA | Rfer_2953 | phosphoribosyl-ATP pyrophosphohydrolase | RecName: Full=Phosphoribosyl-ATP pyrophosphatase; Short=PRA-PH; EC=3.6.1.31; | chromosome | CDS | 3263852 | 393 | + | 0.600509 |
NA | Rfer_0907 | Drug resistance transporter EmrB/QacA subfamily | SubName: Full=Drug resistance transporter EmrB/QacA subfamily; | chromosome | CDS | 949579 | 1491 | - | 0.551308 |
NA | Rfer_3659 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; | chromosome | CDS | 4077067 | 1221 | + | 0.599509 |
NA | Rfer_1710 | argininosuccinate lyase | RecName: Full=Argininosuccinate lyase; Short=ASAL; EC=4.3.2.1; AltName: Full=Arginosuccinase; | chromosome | CDS | 1841589 | 1452 | - | 0.612259 |
NA | Rfer_3401 | Lysine exporter protein (LYSE/YGGA) | SubName: Full=Lysine exporter protein (LYSE/YGGA); Flags: Precursor; | chromosome | CDS | 3786595 | 669 | + | 0.641256 |
NA | Rfer_2882 | glycosyl transferase, family 3 | SubName: Full=Glycosyl transferase, family 3; | chromosome | CDS | 3185501 | 915 | + | 0.64918 |
NA | Rfer_0454 | pyruvate carboxyltransferase | RecName: Full=4-hydroxy-2-oxovalerate aldolase; Short=HOA; EC=4.1.3.39; AltName: Full=4-hydroxy-2-keto-pentanoic acid aldolase; AltName: Full=4-hydroxy-2-oxopentanoate aldolase; | chromosome | CDS | 460260 | 1029 | - | 0.62585 |
NA | Rfer_0213 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; | chromosome | CDS | 210447 | 882 | - | 0.619048 |
NA | Rfer_0211 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 208680 | 738 | - | 0.663957 |
NA | Rfer_0233 | Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine | SubName: Full=Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; | chromosome | CDS | 232263 | 654 | + | 0.559633 |
NA | Rfer_2105 | Amino-acid N-acetyltransferase (ArgA) | RecName: Full=Amino-acid acetyltransferase; EC=2.3.1.-; EC=2.3.1.1; AltName: Full=N-acetylglutamate synthase; | chromosome | CDS | 2277872 | 1356 | - | 0.596608 |
NA | Rfer_3829 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding | SubName: Full=D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; | chromosome | CDS | 4272788 | 921 | - | 0.654723 |
NA | Rfer_0291 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 293785 | 807 | + | 0.633209 |
NA | Rfer_2587 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; Flags: Precursor; | chromosome | CDS | 2848349 | 954 | - | 0.522013 |
NA | Rfer_2177 | cysteine desulfurase IscS | RecName: Full=Cysteine desulfurase IscS; EC=2.8.1.7; | chromosome | CDS | 2376181 | 1293 | + | 0.552204 |
NA | Rfer_0984 | binding-protein-dependent transport systems inner membrane component | SubName: Full=Binding-protein-dependent transport systems inner membrane component; Flags: Precursor; | chromosome | CDS | 1033173 | 942 | - | 0.64862 |
NA | Rfer_3226 | Ornithine cyclodeaminase | SubName: Full=Ornithine cyclodeaminase; EC=4.3.1.12; | chromosome | CDS | 3573326 | 1026 | - | 0.607212 |
NA | Rfer_2459 | Sulfate adenylyltransferase | SubName: Full=Sulfate adenylyltransferase subunit 2; EC=2.7.7.4; | chromosome | CDS | 2707047 | 972 | + | 0.62037 |
NA | Rfer_0487 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; Flags: Precursor; | chromosome | CDS | 503163 | 1284 | - | 0.606698 |
NA | Rfer_0845 | Tartrate dehydrogenase | SubName: Full=Tartrate dehydrogenase; EC=1.1.1.93; | chromosome | CDS | 883332 | 1089 | - | 0.614325 |
NA | Rfer_4054 | alanine dehydrogenase | RecName: Full=Alanine dehydrogenase; EC=1.4.1.1; | chromosome | CDS | 4518783 | 1116 | + | 0.657706 |
NA | Rfer_1838 | Extracellular ligand-binding receptor | SubName: Full=Extracellular ligand-binding receptor; Flags: Precursor; | chromosome | CDS | 1976472 | 1200 | - | 0.545 |
NA | Rfer_4159 | Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine | SubName: Full=Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; | chromosome | CDS | 4630071 | 669 | - | 0.588939 |
NA | Rfer_4065 | extracellular ligand-binding receptor | SubName: Full=Extracellular ligand-binding receptor; Flags: Precursor; | chromosome | CDS | 4532514 | 1176 | + | 0.613946 |
NA | Rfer_2969 | extracellular solute-binding protein, family 3 | SubName: Full=Extracellular solute-binding protein, family 3; Flags: Precursor; | chromosome | CDS | 3275333 | 789 | + | 0.575412 |
NA | Rfer_1855 | binding-protein-dependent transport systems inner membrane component | SubName: Full=Binding-protein-dependent transport systems inner membrane component; Flags: Precursor; | chromosome | CDS | 1996497 | 1179 | + | 0.676845 |
NA | Rfer_2993 | Asparaginase | SubName: Full=Asparaginase; EC=3.5.1.1; Flags: Precursor; | chromosome | CDS | 3300350 | 1026 | - | 0.631579 |
NA | Rfer_3323 | acetolactate synthase, small subunit | SubName: Full=Acetolactate synthase, small subunit; EC=2.2.1.6; | chromosome | CDS | 3688634 | 492 | + | 0.548781 |
NA | Rfer_3779 | periplasmic sensor signal transduction histidine kinase | SubName: Full=Periplasmic sensor signal transduction histidine kinase; Flags: Precursor; | chromosome | CDS | 4222687 | 2763 | - | 0.62034 |
NA | Rfer_1795 | 3-isopropylmalate dehydratase, large subunit | RecName: Full=3-isopropylmalate dehydratase large subunit; EC=4.2.1.33; AltName: Full=Alpha-IPM isomerase; AltName: Full=Isopropylmalate isomerase; | chromosome | CDS | 1932810 | 1473 | - | 0.60353 |
NA | Rfer_1897 | diguanylate cyclase/phosphodiesterase | SubName: Full=Diguanylate cyclase/phosphodiesterase; | chromosome | CDS | 2036027 | 3267 | - | 0.645546 |
NA | Rfer_2615 | aminotransferase, class I and II | SubName: Full=Aminotransferase; EC=2.6.1.-; | chromosome | CDS | 2878973 | 1062 | - | 0.691149 |
NA | Rfer_3504 | Extracellular ligand-binding receptor | SubName: Full=Extracellular ligand-binding receptor; Flags: Precursor; | chromosome | CDS | 3895881 | 1179 | + | 0.562341 |
NA | Rfer_3104 | binding-protein-dependent transport systems inner membrane component | SubName: Full=Binding-protein-dependent transport systems inner membrane component; Flags: Precursor; | chromosome | CDS | 3443938 | 921 | + | 0.581976 |
NA | Rfer_1005 | Extracellular ligand-binding receptor | SubName: Full=Extracellular ligand-binding receptor; Flags: Precursor; | chromosome | CDS | 1058593 | 1224 | + | 0.572712 |
NA | Rfer_4015 | Glyoxalase/bleomycin resistance protein/dioxygenase | SubName: Full=Glyoxalase/bleomycin resistance protein/dioxygenase; | chromosome | CDS | 4480563 | 381 | + | 0.627297 |
NA | Rfer_2689 | Argininosuccinate synthase | SubName: Full=Argininosuccinate synthase; EC=6.3.4.5; | chromosome | CDS | 2959466 | 1344 | + | 0.605655 |
NA | Rfer_2128 | extracellular solute-binding protein, family 5 | SubName: Full=Extracellular solute-binding protein, family 5; Flags: Precursor; | chromosome | CDS | 2305825 | 1812 | + | 0.595475 |
NA | Rfer_1084 | L-serine dehydratase 1 | SubName: Full=L-serine ammonia-lyase; EC=4.3.1.17; | chromosome | CDS | 1158783 | 1419 | + | 0.651163 |
NA | Rfer_2588 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; Flags: Precursor; | chromosome | CDS | 2849299 | 873 | - | 0.558992 |
NA | Rfer_2121 | acetylornithine and succinylornithine aminotransferases | RecName: Full=Acetylornithine aminotransferase; Short=ACOAT; EC=2.6.1.11; | chromosome | CDS | 2297499 | 1215 | - | 0.603292 |
NA | Rfer_1569 | chorismate mutase | SubName: Full=Prephenate dehydratase / chorismate mutase; EC=4.2.1.51; EC=5.4.99.5; | chromosome | CDS | 1695718 | 1083 | - | 0.638042 |
NA | Rfer_1075 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 1150090 | 837 | + | 0.577061 |
NA | Rfer_3537 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 3932883 | 810 | - | 0.583951 |
NA | Rfer_3224 | binding-protein-dependent transport systems inner membrane component | SubName: Full=Binding-protein-dependent transport systems inner membrane component; Flags: Precursor; | chromosome | CDS | 3571667 | 888 | + | 0.605856 |
NA | Rfer_0086 | peptidase M24 | SubName: Full=Aminopeptidase P. Metallo peptidase. MEROPS family M24B; EC=3.4.11.9; | chromosome | CDS | 86684 | 1410 | + | 0.65461 |
NA | Rfer_3691 | aminotransferase, class V | SubName: Full=Aminotransferase, class V; | chromosome | CDS | 4123159 | 1128 | - | 0.641844 |
NA | Rfer_0516 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; | chromosome | CDS | 538923 | 1326 | - | 0.61463 |
NA | Rfer_1509 | NAD-glutamate dehydrogenase | SubName: Full=Glutamate dehydrogenase (NAD); EC=1.4.1.2; | chromosome | CDS | 1622497 | 4773 | + | 0.598994 |
NA | Rfer_1164 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1248289 | 315 | + | 0.590476 |
NA | Rfer_1863 | cysteine desulfurases, SufS subfamily | RecName: Full=Cysteine desulfurase; EC=2.8.1.7; | chromosome | CDS | 2003623 | 1251 | + | 0.615508 |
NA | Rfer_3229 | FAD dependent oxidoreductase | SubName: Full=FAD dependent oxidoreductase; | chromosome | CDS | 3576658 | 1176 | + | 0.585884 |
NA | Rfer_0231 | FAD dependent oxidoreductase | SubName: Full=FAD dependent oxidoreductase; | chromosome | CDS | 230160 | 1284 | + | 0.622274 |
NA | Rfer_0930 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like | SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; | chromosome | CDS | 979439 | 969 | - | 0.648091 |
NA | Rfer_2606 | aminotransferase, class I and II | SubName: Full=Aminotransferase, class I and II; | chromosome | CDS | 2870334 | 1188 | - | 0.622896 |
NA | Rfer_0887 | binding-protein-dependent transport systems inner membrane component | SubName: Full=Binding-protein-dependent transport systems inner membrane component; Flags: Precursor; | chromosome | CDS | 926941 | 792 | - | 0.622475 |
NA | Rfer_0482 | phospho-2-dehydro-3-deoxyheptonate aldolase | RecName: Full=Phospho-2-dehydro-3-deoxyheptonate aldolase; EC=2.5.1.54; AltName: Full=3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; AltName: Full=DAHP synthase; AltName: Full=Phospho-2-keto-3-deoxyheptonate aldolase; | chromosome | CDS | 499016 | 1059 | + | 0.644948 |
NA | Rfer_2682 | O-succinylhomoserine sulfhydrylase | SubName: Full=O-succinylhomoserine sulfhydrylase; EC=2.5.1.48; | chromosome | CDS | 2953153 | 1224 | - | 0.598856 |
NA | Rfer_0161 | extracellular solute-binding protein, family 3 | SubName: Full=Extracellular solute-binding protein, family 3; Flags: Precursor; | chromosome | CDS | 161181 | 798 | + | 0.606516 |
NA | Rfer_2948 | Imidazoleglycerol-phosphate dehydratase | RecName: Full=Imidazoleglycerol-phosphate dehydratase; Short=IGPD; EC=4.2.1.19; | chromosome | CDS | 3260321 | 615 | + | 0.61626 |
NA | Rfer_3884 | arginase | SubName: Full=Arginase; EC=3.5.3.1; | chromosome | CDS | 4335263 | 966 | + | 0.639752 |
NA | Rfer_1426 | protein of unknown function DUF6, transmembrane | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 1534797 | 909 | - | 0.634763 |
NA | Rfer_0654 | 5,10-methylenetetrahydrofolate reductase | RecName: Full=Methylenetetrahydrofolate reductase; EC=1.5.1.20; | chromosome | CDS | 678504 | 852 | + | 0.618545 |
NA | Rfer_2120 | ornithine carbamoyltransferase | RecName: Full=Ornithine carbamoyltransferase, catabolic; Short=OTCase; EC=2.1.3.3; AltName: Full=Ornithine carbamoyltransferase; | chromosome | CDS | 2296538 | 909 | - | 0.59846 |
NA | Rfer_1030 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 1089906 | 720 | - | 0.533333 |
NA | Rfer_2060 | 6-phosphogluconate dehydratase | SubName: Full=6-phosphogluconate dehydratase; EC=4.2.1.12; | chromosome | CDS | 2230171 | 1851 | + | 0.663965 |
NA | Rfer_0940 | pyridoxal phosphate-dependent enzyme, putative | SubName: Full=L-seryl-tRNA(Sec) selenium transferase; EC=2.9.1.1; | chromosome | CDS | 989158 | 1203 | + | 0.530341 |
NA | Rfer_3607 | anthranilate synthase component I | SubName: Full=Anthranilate synthase, component I; EC=4.1.3.27; Flags: Precursor; | chromosome | CDS | 4018315 | 1512 | - | 0.625 |
NA | Rfer_2979 | glutamine synthetase, type I | RecName: Full=Glutamine synthetase; EC=6.3.1.2; | chromosome | CDS | 3285624 | 1416 | + | 0.586158 |
NA | Rfer_0934 | Twin-arginine translocation pathway signal | SubName: Full=Twin-arginine translocation pathway signal; Flags: Precursor; | chromosome | CDS | 983398 | 1614 | - | 0.593556 |
NA | Rfer_0585 | amino acid permease-associated protein | SubName: Full=Amino acid permease-associated protein; | chromosome | CDS | 606772 | 1404 | + | 0.606125 |
NA | Rfer_0214 | Extracellular ligand-binding receptor | SubName: Full=Extracellular ligand-binding receptor; Flags: Precursor; | chromosome | CDS | 211341 | 1182 | - | 0.620981 |
NA | Rfer_3222 | extracellular solute-binding protein, family 1 | SubName: Full=Extracellular solute-binding protein, family 1; Flags: Precursor; | chromosome | CDS | 3569415 | 1068 | + | 0.594569 |
NA | Rfer_3807 | extracellular solute-binding protein, family 3 | SubName: Full=Extracellular solute-binding protein, family 3; Flags: Precursor; | chromosome | CDS | 4247635 | 768 | + | 0.575521 |
NA | Rfer_3381 | twin-arginine translocation pathway signal | SubName: Full=Twin-arginine translocation pathway signal; Flags: Precursor; | chromosome | CDS | 3757213 | 1260 | - | 0.586508 |
NA | Rfer_0403 | peptidase M20 | SubName: Full=Peptidase M20; | chromosome | CDS | 408622 | 1536 | - | 0.652995 |
NA | Rfer_3728 | protein of unknown function DUF6, transmembrane | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 4159212 | 948 | + | 0.633966 |
NA | Rfer_0268 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; | chromosome | CDS | 272533 | 1038 | - | 0.620424 |
NA | Rfer_2004 | carbamoyl-phosphate synthase, small subunit | RecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; | chromosome | CDS | 2159622 | 1254 | + | 0.598086 |
NA | Rfer_3402 | urease, alpha subunit | RecName: Full=Urease subunit alpha; EC=3.5.1.5; AltName: Full=Urea amidohydrolase subunit alpha; | chromosome | CDS | 3787288 | 1746 | + | 0.62543 |
NA | Rfer_0141 | Phosphonate C-P lyase system, PhnK | SubName: Full=Phosphonate C-P lyase system, PhnK; | chromosome | CDS | 144065 | 885 | - | 0.674576 |
NA | Rfer_3887 | cobalamin B12-binding | SubName: Full=Beta-lysine 5,6-aminomutase beta subunit / D-lysine 5,6-aminomutase beta subunit; EC=5.4.3.3; EC=5.4.3.4; | chromosome | CDS | 4337715 | 756 | - | 0.585979 |
NA | Rfer_2392 | extracellular ligand-binding receptor | SubName: Full=Extracellular ligand-binding receptor; Flags: Precursor; | chromosome | CDS | 2634884 | 1236 | - | 0.546117 |
NA | Rfer_0434 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; | chromosome | CDS | 439184 | 1326 | - | 0.65083 |
NA | Rfer_0288 | Extracellular ligand-binding receptor | SubName: Full=Extracellular ligand-binding receptor; Flags: Precursor; | chromosome | CDS | 290698 | 1173 | + | 0.592498 |
NA | Rfer_1867 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding | SubName: Full=D-3-phosphoglycerate dehydrogenase; EC=1.1.1.95; | chromosome | CDS | 2006503 | 1242 | + | 0.608696 |
NA | Rfer_0358 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; | chromosome | CDS | 359352 | 1233 | + | 0.616383 |
NA | Rfer_0440 | Tartrate dehydrogenase | SubName: Full=Tartrate dehydrogenase; EC=1.1.1.93; | chromosome | CDS | 446021 | 1068 | - | 0.626405 |
NA | Rfer_0354 | binding-protein-dependent transport systems inner membrane component | SubName: Full=Binding-protein-dependent transport systems inner membrane component; | chromosome | CDS | 355250 | 918 | + | 0.557734 |
NA | Rfer_0163 | Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine | SubName: Full=Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; | chromosome | CDS | 162688 | 645 | + | 0.609302 |
NA | Rfer_0669 | Asparagine synthase, glutamine-hydrolyzing | RecName: Full=Asparagine synthetase; EC=6.3.5.4; | chromosome | CDS | 695089 | 1926 | + | 0.604881 |
NA | Rfer_0166 | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase | SubName: Full=Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; | chromosome | CDS | 165970 | 1224 | + | 0.596405 |
NA | Rfer_3377 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 3752852 | 699 | - | 0.622318 |
NA | Rfer_1014 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; Flags: Precursor; | chromosome | CDS | 1070348 | 984 | + | 0.613821 |
NA | Rfer_3601 | Indole-3-glycerol-phosphate synthase | RecName: Full=Indole-3-glycerol phosphate synthase; Short=IGPS; EC=4.1.1.48; | chromosome | CDS | 4012081 | 795 | - | 0.605031 |
NA | Rfer_1076 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 1150926 | 705 | + | 0.595745 |
NA | Rfer_1894 | major facilitator superfamily MFS_1 | SubName: Full=Major facilitator superfamily MFS_1; | chromosome | CDS | 2033035 | 1188 | - | 0.616162 |
NA | Rfer_2585 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 2846955 | 702 | - | 0.538462 |
NA | Rfer_3172 | inner-membrane translocator | SubName: Full=Inner-membrane translocator; | chromosome | CDS | 3508476 | 930 | - | 0.595699 |
NA | Rfer_0453 | dihydrodipicolinate synthetase | SubName: Full=2-dehydro-3-deoxy-L-arabinonate dehydratase; EC=4.2.1.43; | chromosome | CDS | 459314 | 930 | - | 0.629032 |
NA | Rfer_0464 | cysteine desulfurase | SubName: Full=Cysteine desulfurase; | chromosome | CDS | 474022 | 138 | + | 0.608696 |
NA | Rfer_2671 | aminotransferase, class I and II | SubName: Full=Aminotransferase; EC=2.6.1.-; Flags: Precursor; | chromosome | CDS | 2939020 | 1194 | + | 0.61809 |
NA | Rfer_1546 | aminotransferase, class IV | SubName: Full=Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase; EC=2.6.1.-; | chromosome | CDS | 1663095 | 915 | + | 0.595628 |
NA | Rfer_0353 | spermidine/putrescine ABC transporter ATP-binding subunit | SubName: Full=Spermidine/putrescine ABC transporter ATP-binding subunit; | chromosome | CDS | 354137 | 1101 | + | 0.567666 |
NA | Rfer_3509 | thiamine pyrophosphate enzyme-like TPP binding protein | SubName: Full=Thiamine pyrophosphate enzyme-like TPP binding protein; | chromosome | CDS | 3900537 | 1734 | - | 0.599193 |
NA | Rfer_0266 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 269984 | 750 | - | 0.64 |
NA | Rfer_1835 | ABC transporter related | SubName: Full=ABC transporter related; | chromosome | CDS | 1972786 | 717 | - | 0.573222 |
NA | Rfer_1949 | extracellular solute-binding protein, family 5 | SubName: Full=Extracellular solute-binding protein, family 5; Flags: Precursor; | chromosome | CDS | 2092623 | 1629 | - | 0.587477 |
NA | Rfer_1700 | nitrogen regulatory protein P-II (GlnB, GlnK) | SubName: Full=Nitrogen regulatory protein P-II; | chromosome | CDS | 1830257 | 339 | + | 0.575221 |
NA | Rfer_3215 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3562976 | 822 | - | 0.614355 |
NA | Rfer_1353 | aspartate kinase | RecName: Full=Aspartokinase; EC=2.7.2.4; | chromosome | CDS | 1456187 | 1269 | + | 0.570528 |