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2024-05-19 07:50:34

Gene list

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COG category: Amino acid transport and metabolism
Organism: Porphyromonas gingivalis W83, W83

Number of genes found: 102

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Porphyromonas gingivalis W83, W83
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PG1788 cysteine peptidase, putativeSubName: Full=Cysteine peptidase, putative; chromosome CDS1876116 1272 + 0.477201
NA PG1391 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1471810 1212 + 0.570132
NA PG1701 glutamine amidotransferase, class II/dipeptidaseSubName: Full=Glutamine amidotransferase, class II/dipeptidase; chromosome CDS1786235 1809 - 0.526258
NA PG0246 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS281140 192 - 0.510417
NA PG1460 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1540100 360 + 0.45
NA PG1313 dipeptidase-related proteinSubName: Full=Dipeptidase-related protein; chromosome CDS1392422 1659 + 0.486438
NA PG0321 LAO/AO transport system ATPaseSubName: Full=LAO/AO transport system ATPase; chromosome CDS354788 1032 + 0.543605
NA PG0745 lactoylglutathione lyase, putativeSubName: Full=Lactoylglutathione lyase, putative; chromosome CDS792072 399 - 0.518797
NA PG0399 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS435797 531 - 0.502825
NA PG1160 L-threonine-O-3-phosphate decarboxylase, putativeSubName: Full=L-threonine-O-3-phosphate decarboxylase, putative; chromosome CDS1239071 1008 - 0.506944
NA PG1361 dipeptidyl aminopeptidase IV, putativeRecName: Full=Prolyl tripeptidyl peptidase; Short=PTP; EC=3.4.14.12; AltName: Full=Prolyl tripeptidyl peptidase 81.8 kDa form; AltName: Full=Prolyl tripeptidyl peptidase A; Contains: RecName: Full=Prolyl tripeptidyl peptidase 75.8 kDa form; Flags: Precursor; chromosome CDS1440000 2199 - 0.482947
NA PG1613 glyoxalase family proteinSubName: Full=Glyoxalase family protein; chromosome CDS1693254 405 - 0.461728
NA PG0889 peptidase, M24 familySubName: Full=Peptidase, M24 family; chromosome CDS950240 1197 + 0.480368
NA PG0474 low-specificity L-threonine aldolaseSubName: Full=Low-specificity L-threonine aldolase; chromosome CDS515101 1038 - 0.533719
NA PG0735 aminotransferase, class VSubName: Full=Aminotransferase, class V; chromosome CDS784523 1215 + 0.547325
NA PG1009 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1067731 855 - 0.436257
NA PG1751 aminotransferase, class VSubName: Full=Aminotransferase, class V; chromosome CDS1837420 1131 + 0.545535
NA PG1401 beta-eliminating lyaseSubName: Full=Beta-eliminating lyase; chromosome CDS1483489 1380 - 0.485507
NA PG0115 hexapeptide transferase family proteinSubName: Full=Hexapeptide transferase family protein; chromosome CDS138178 438 + 0.390411
NA PG2150 LysM domain proteinSubName: Full=LysM domain protein; chromosome CDS2257757 1506 - 0.521248
NA PG1004 prolyl oligopeptidase family proteinSubName: Full=Prolyl oligopeptidase family protein; chromosome CDS1060523 2280 - 0.515351
NA PG1136 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1216789 1629 - 0.473296
NA PG1142 exopolysaccharide synthesis-related proteinSubName: Full=Exopolysaccharide synthesis-related protein; chromosome CDS1224661 909 - 0.363036
NA PG0885 phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutaseSubName: Full=Phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase; chromosome CDS947885 1101 + 0.506812
NA PG1706 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1793939 363 - 0.482094
NA PG1186 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1267793 1449 - 0.489993
NA PG0226 transglutaminase-related proteinSubName: Full=Transglutaminase-related protein; chromosome CDS259928 2694 - 0.569785
NA PG0561 peptidase, M20/M25/M40 familySubName: Full=Peptidase, M20/M25/M40 family; chromosome CDS617790 1356 - 0.522124
NA PG1394 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1476354 519 - 0.477842
NA PG1891 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1987996 510 + 0.339216
NA PG0203 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS239594 708 - 0.444915
NA PG2027 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2125634 525 + 0.506667
NA PG0884 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS946619 1251 + 0.497202
NA PG1327 aminotransferase, putativeSubName: Full=Aminotransferase, putative; chromosome CDS1405360 1311 - 0.504195
NA PG1185 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1266982 861 - 0.491289
NA PG1220 erythronate-4-phosphate dehydrogenase, putativeRecName: Full=Erythronate-4-phosphate dehydrogenase; EC=1.1.1.290; chromosome CDS1297126 1134 + 0.537037
NA PG0462 transporter, putativeSubName: Full=Transporter, putative; chromosome CDS504966 1404 - 0.495014
NA PG1271 acetylornithine aminotransferase, putativeSubName: Full=Acetylornithine aminotransferase, putative; chromosome CDS1350304 1230 - 0.50813
NA PG2133 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS2239142 912 + 0.508772
NA PG0724 prolyl oligopeptidase family proteinSubName: Full=Prolyl oligopeptidase family protein; chromosome CDS775369 1947 + 0.518233
NA PG1008 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1066976 759 - 0.480896
NA PG0333 membrane protein, putativeSubName: Full=Membrane protein, putative; chromosome CDS367963 909 + 0.573157
NA PG0232 zinc carboxypeptidase, putativeSubName: Full=Zinc carboxypeptidase, putative; chromosome CDS267548 2466 - 0.486212
NA PG1279 D-isomer specific 2-hydroxyacid dehydrogenase family proteinSubName: Full=D-isomer specific 2-hydroxyacid dehydrogenase family protein; chromosome CDS1356675 921 + 0.466884
NA PG0144 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS166733 1026 - 0.628655
NA PG1170 SerB family proteinSubName: Full=SerB family protein; chromosome CDS1249303 873 + 0.531501
NA PG0508 HAD-superfamily subfamily IB hydrolase, TIGR01490SubName: Full=HAD-superfamily subfamily IB hydrolase, TIGR01490; chromosome CDS548226 603 - 0.537313
NA PG1679 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1763936 1395 + 0.489606
NA PG0329 formiminotransferase-cyclodeaminase-relatedproteinSubName: Full=Formiminotransferase-cyclodeaminase-related protein; chromosome CDS363617 903 - 0.585825
NA PG1786 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1874498 885 + 0.468927
NA PG1210 peptidase, M24 familySubName: Full=Peptidase, M24 family; chromosome CDS1289184 1788 + 0.495526
NA PG0228 DdaH family proteinSubName: Full=DdaH family protein; chromosome CDS264114 927 - 0.533981
NA PG1424 peptidylarginine deiminaseRecName: Full=Peptidylarginine deiminase; EC=3.5.3.-; Flags: Precursor; chromosome CDS1509227 1671 - 0.472771
NA PG1383 amino acid exporter, putativeSubName: Full=Amino acid exporter, putative; chromosome CDS1462809 639 + 0.464789
NA PG2082 POT family proteinSubName: Full=POT family protein; chromosome CDS2181933 1542 - 0.446174
NA PG0312 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS346599 540 - 0.481481
NA PG0012 L-threonine-O-3-phosphate decarboxylase, putativeSubName: Full=L-threonine-O-3-phosphate decarboxylase, putative; chromosome CDS14693 1029 + 0.492711
NA PG0325 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS359175 630 - 0.525397
NA PG1754 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS1839819 2526 + 0.517419
NA PG0646 iron compound ABC transporter, ATP-binding proteinSubName: Full=Iron compound ABC transporter, ATP-binding protein; chromosome CDS698160 1002 - 0.520958
NA PG1101 sodium:solute symporter family proteinSubName: Full=Sodium:solute symporter family protein; chromosome CDS1169099 1461 - 0.529774
LYS1 PG0677 saccharopine dehydrogenaseSubName: Full=Saccharopine dehydrogenase; chromosome CDS727793 1194 + 0.532663
ansA PG2121 L-asparaginaseSubName: Full=L-asparaginase; chromosome CDS2228635 1080 - 0.498148
aroA PG1944 3-phosphoshikimate 1-carboxyvinyltransferaseRecName: Full=3-phosphoshikimate 1-carboxyvinyltransferase; EC=2.5.1.19; chromosome CDS2030556 1260 + 0.561905
aroB PG1247 3-dehydroquinate synthaseSubName: Full=3-dehydroquinate synthase; chromosome CDS1324584 1062 + 0.498117
aroC PG1314 chorismate synthaseRecName: Full=Chorismate synthase; EC=4.2.3.5; AltName: Full=5-enolpyruvylshikimate-3-phosphate phospholyase; chromosome CDS1394452 1107 - 0.506775
aroE PG0978 shikimate 5-dehydrogenaseSubName: Full=Shikimate 5-dehydrogenase; chromosome CDS1040173 750 + 0.528
aroK PG1593 shikimate kinaseRecName: Full=Shikimate kinase; Short=SK; EC=2.7.1.71; chromosome CDS1671643 561 + 0.525847
aroQ PG1731 3-dehydroquinate dehydratase, type IIRecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase; EC=4.2.1.10; AltName: Full=Type II DHQase; chromosome CDS1819768 426 - 0.528169
asd PG0571 aspartate-semialdehyde dehydrogenaseRecName: Full=Aspartate-semialdehyde dehydrogenase; Short=ASA dehydrogenase; Short=ASADH; EC=1.2.1.11; AltName: Full=Aspartate-beta-semialdehyde dehydrogenase; chromosome CDS626539 1014 + 0.525641
aspA PG1741 aspartate ammonia-lyaseSubName: Full=Aspartate ammonia-lyase; chromosome CDS1825946 1428 - 0.528011
carA PG0529 carbamoyl-phosphate synthase, small subunitRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS574777 1074 + 0.494413
carB PG0530 carbamoyl-phosphate synthase, large subunitSubName: Full=Carbamoyl-phosphate synthase, large subunit; chromosome CDS575869 3228 + 0.494734
dapA PG2052 dihydrodipicolinate synthaseRecName: Full=4-hydroxy-tetrahydrodipicolinate synthase; Short=HTPA synthase; EC=4.3.3.7; chromosome CDS2149776 870 + 0.494253
dapB PG2002 dihydrodipicolinate reductaseSubName: Full=Dihydrodipicolinate reductase; chromosome CDS2090961 717 - 0.543933
dcp-1 PG0758 peptidyl-dipeptidase DcpSubName: Full=Peptidyl-dipeptidase Dcp; chromosome CDS806557 2088 - 0.521073
dcp-2 PG1789 peptidyl-dipeptidase DcpSubName: Full=Peptidyl-dipeptidase Dcp; chromosome CDS1877507 2037 - 0.524791
gcvH PG0950 glycine cleavage system H proteinRecName: Full=Glycine cleavage system H protein; chromosome CDS1010001 381 + 0.498688
gcvP PG1305 glycine cleavage system P proteinSubName: Full=Glycine cleavage system P protein; chromosome CDS1383761 2868 - 0.533821
gcvT PG1559 glycine cleavage system T proteinRecName: Full=Aminomethyltransferase; EC=2.1.2.10; AltName: Full=Glycine cleavage system T protein; chromosome CDS1637994 1089 - 0.514233
gdh PG1232 glutamate dehydrogenase, NAD-specificRecName: Full=NAD-specific glutamate dehydrogenase; Short=NAD-GDH; EC=1.4.1.2; AltName: Full=Surface-associated protein PGAG1; chromosome CDS1308364 1338 - 0.508969
gltD PG2033 glutamate synthase, small subunitSubName: Full=Glutamate synthase, small subunit; chromosome CDS2133505 1389 - 0.535637
glyA PG0042 serine hydroxymethyltransferaseRecName: Full=Serine hydroxymethyltransferase; Short=SHMT; Short=Serine methylase; EC=2.1.2.1; chromosome CDS49769 1281 + 0.525371
hutH PG0324 histidine ammonia-lyaseRecName: Full=Histidine ammonia-lyase; EC=4.3.1.3; chromosome CDS357679 1494 - 0.547523
hutU PG1872 urocanate hydrataseRecName: Full=Urocanate hydratase; Short=Urocanase; EC=4.2.1.49; AltName: Full=Imidazolonepropionate hydrolase; chromosome CDS1967022 1980 - 0.533333
ilvE PG1290 branched-chain amino acid aminotransferaseSubName: Full=Branched-chain amino acid aminotransferase; chromosome CDS1368393 1020 + 0.515686
kamA PG1070 L-lysine 2,3-aminomutaseSubName: Full=L-lysine 2,3-aminomutase; chromosome CDS1136769 1251 + 0.469225
lysA PG2188 diaminopimelate decarboxylaseRecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase; Short=DAPDC; EC=4.1.1.20; chromosome CDS2294723 1149 - 0.517842
lysC PG2189 aspartate kinaseRecName: Full=Aspartokinase; EC=2.7.2.4; chromosome CDS2295901 1341 - 0.50261
megL PG0343 methionine gamma-lyaseSubName: Full=Methionine gamma-lyase; chromosome CDS377271 1182 - 0.583756
nspC PG0152 carboxynorspermidine decarboxylaseSubName: Full=Carboxynorspermidine decarboxylase; chromosome CDS174611 1137 - 0.566403
nupG PG1836 nucleoside permease NupGSubName: Full=Nucleoside permease NupG; chromosome CDS1928683 1236 + 0.484628
pepC PG1605 aminopeptidase CSubName: Full=Aminopeptidase C; chromosome CDS1685319 1344 + 0.508929
pepD-1 PG0137 aminoacyl-histidine dipeptidaseSubName: Full=Aminoacyl-histidine dipeptidase; chromosome CDS159244 1455 + 0.510653
pepD-2 PG0537 aminoacyl-histidine dipeptidaseSubName: Full=Aminoacyl-histidine dipeptidase; chromosome CDS586994 1461 + 0.497604
pepT PG0445 peptidase TRecName: Full=Peptidase T; EC=3.4.11.4; AltName: Full=Aminotripeptidase; AltName: Full=Tripeptide aminopeptidase; chromosome CDS485392 1218 + 0.539409
prsA PG2097 ribose-phosphate pyrophosphokinaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; Short=P-Rib-PP synthase; Short=PRPP synthase; chromosome CDS2205611 942 - 0.518047
sda PG0084 L-serine dehydratase, iron-sulfur-dependent, single chain formSubName: Full=L-serine dehydratase, iron-sulfur-dependent, single chain form; chromosome CDS97972 1200 + 0.556667
selD PG1753 selenide, water dikinaseRecName: Full=Selenide, water dikinase; EC=2.7.9.3; AltName: Full=Selenium donor protein; AltName: Full=Selenophosphate synthase; chromosome CDS1838755 1047 + 0.553009
serB PG0653 phosphoserine phosphataseSubName: Full=Phosphoserine phosphatase; chromosome CDS704303 1242 - 0.482287
serC PG1278 phosphoserine aminotransferaseRecName: Full=Phosphoserine aminotransferase; EC=2.6.1.52; AltName: Full=Phosphohydroxythreonine aminotransferase; Short=PSAT; chromosome CDS1355492 1083 + 0.473684
trpG PG0713 anthranilate synthase component IISubName: Full=Anthranilate synthase component II; chromosome CDS767243 597 - 0.549414