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2024-05-08 02:22:07

Gene list

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COG category: Amino acid transport and metabolism
Organism: Thiomicrospira denitrificans ATCC 33889, ATCC 33889

Number of genes found: 148

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Thiomicrospira denitrificans ATCC 33889, ATCC 33889
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Tmden_2023 Chorismate synthasechromosome CDS2104789 1077 - 0.38533
NA Tmden_0157 Sulfate adenylyltransferase, small subunitchromosome CDS157386 912 + 0.394737
NA Tmden_1131 Ferredoxin-dependent glutamate synthasechromosome CDS1182799 1728 + 0.332755
NA Tmden_0687 3-dehydroquinate dehydratasechromosome CDS699094 483 + 0.372671
NA Tmden_0485 ABC transporter-related proteinchromosome CDS490250 570 + 0.357895
NA Tmden_1080 Imidazoleglycerol-phosphate dehydratasechromosome CDS1140465 573 - 0.366492
NA Tmden_0434 putative para-aminobenzoate synthase component Ichromosome CDS436689 600 + 0.305
NA Tmden_1681 Tryptophan synthasechromosome CDS1763240 741 + 0.323887
NA Tmden_1226 Dihydrodipicolinate synthase subfamilychromosome CDS1294366 894 + 0.376958
NA Tmden_0222 Sodium:alanine symporterchromosome CDS229523 1446 - 0.372061
NA Tmden_1684 Glutamate 5-kinase, ProB-relatedchromosome CDS1764788 768 + 0.358073
NA Tmden_0913 Aspartyl aminopeptidasechromosome CDS948199 1260 + 0.394444
NA Tmden_2070 Na+/solute symporterchromosome CDS2159181 1470 + 0.372109
NA Tmden_0133 hypothetical proteinchromosome CDS137994 753 + 0.371846
NA Tmden_1471 Glutathionylspermidine synthasechromosome CDS1542799 1179 + 0.364716
NA Tmden_1606 Phosphoribosylanthranilate isomerasechromosome CDS1686170 585 + 0.369231
NA Tmden_1371 conserved hypothetical proteinchromosome CDS1441627 1209 - 0.331679
NA Tmden_1140 Acetolactate synthase, small subunitchromosome CDS1194775 477 - 0.379455
NA Tmden_1254 Acetylornithine and succinylornithine aminotransferasechromosome CDS1322134 1185 - 0.357806
NA Tmden_1143 Threonine dehydratase IIchromosome CDS1199176 1203 - 0.393184
NA Tmden_0575 conserved hypothetical proteinchromosome CDS583323 486 + 0.304527
NA Tmden_1276 hypothetical proteinchromosome CDS1345781 684 + 0.336257
NA Tmden_1917 hypothetical proteinchromosome CDS1998655 1272 - 0.359277
NA Tmden_0160 putative aminotransferasechromosome CDS161273 1329 + 0.369451
NA Tmden_1666 Methylenetetrahydrofolate reductasechromosome CDS1748177 912 + 0.362939
NA Tmden_0065 Dihydroxy-acid dehydratasechromosome CDS69380 1686 + 0.401542
NA Tmden_0080 Carbamoyl-phosphate synthase, small subunitchromosome CDS87099 1146 + 0.335951
NA Tmden_0200 Asparagine synthase, glutamine-hydrolyzingchromosome CDS203307 1968 - 0.332317
NA Tmden_1870 Dihydrodipicolinate reductasechromosome CDS1950820 768 + 0.372396
NA Tmden_1162 Selenide water dikinasechromosome CDS1217179 1032 - 0.399225
NA Tmden_2091 Histidine biosynthesis protein HisFchromosome CDS2185597 759 + 0.378129
NA Tmden_0163 Asparagine synthase, glutamine-hydrolyzingchromosome CDS164289 1806 - 0.357697
NA Tmden_0494 conserved hypothetical proteinchromosome CDS496559 1299 + 0.340262
NA Tmden_2017 Cis-homoaconitase:3-isopropylmalate dehydratasechromosome CDS2099986 1260 + 0.395238
NA Tmden_1665 Phosphoserine phosphatase SerBchromosome CDS1747499 624 - 0.405449
NA Tmden_1119 Tryptophan synthase, beta chainchromosome CDS1172301 1200 + 0.385833
NA Tmden_0940 hypothetical proteinchromosome CDS980976 219 + 0.347032
NA Tmden_1278 Quinate/Shikimate 5-dehydrogenasechromosome CDS1347996 792 + 0.380051
NA Tmden_0854 Acetylglutamate kinasechromosome CDS882416 852 + 0.387324
NA Tmden_0433 Cysteine synthase K/M/Achromosome CDS435773 924 + 0.392857
NA Tmden_0899 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferasechromosome CDS931158 2280 + 0.357895
NA Tmden_1979 Major facilitator superfamily MFS_1chromosome CDS2060484 1221 - 0.367731
NA Tmden_0495 Shikimate kinasechromosome CDS497860 516 + 0.337209
NA Tmden_1181 Saccharopine dehydrogenasechromosome CDS1239079 1185 - 0.376371
NA Tmden_0186 Asparagine synthase, glutamine-hydrolyzingchromosome CDS188202 1752 - 0.333333
NA Tmden_1176 Glutamate synthase (ferredoxin)chromosome CDS1230467 4440 - 0.36464
NA Tmden_0378 Porphyromonas-type peptidyl-arginine deiminasechromosome CDS380345 996 - 0.340361
NA Tmden_0462 Anthranilate synthase component I and chorismate binding proteinchromosome CDS464837 939 + 0.336528
NA Tmden_1533 N-acetyl-gamma-glutamyl-phosphate reductasechromosome CDS1606023 1005 - 0.370149
NA Tmden_1180 Carboxynorspermidine decarboxylasechromosome CDS1237927 1149 - 0.346388
NA Tmden_1673 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerasechromosome CDS1756670 711 - 0.367089
NA Tmden_0764 Homoserine O-acetyltransferasechromosome CDS790482 1110 - 0.343243
NA Tmden_0471 Histidinol-phosphate aminotransferasechromosome CDS473717 1095 + 0.326027
NA Tmden_0497 Histidinol dehydrogenasechromosome CDS498788 1293 + 0.379737
NA Tmden_1010 signal transduction histidine kinasechromosome CDS1063760 1881 - 0.347156
NA Tmden_0674 Homoserine kinasechromosome CDS687763 882 + 0.339002
NA Tmden_0831 L-seryl-tRNA(Sec) selenium transferasechromosome CDS862375 1350 + 0.32963
NA Tmden_1269 3-deoxy-7-phosphoheptulonate synthasechromosome CDS1338813 1350 - 0.385926
NA Tmden_1889 Glutamine synthetase type Ichromosome CDS1968587 1431 + 0.367575
NA Tmden_1093 possible 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferasechromosome CDS1152184 1275 + 0.350588
NA Tmden_1600 Glutamate N-acetyltransferasechromosome CDS1680632 1179 - 0.372349
NA Tmden_0154 Cysteine synthase K/M/Achromosome CDS155504 924 + 0.410173
NA Tmden_0569 putative integral membrane proteinchromosome CDS570981 1194 + 0.277219
NA Tmden_1524 Peptidase M24chromosome CDS1596699 1293 - 0.338747
NA Tmden_0567 Binding-protein-dependent transport systems inner membrane componentchromosome CDS569537 795 + 0.338365
NA Tmden_0400 Protein of unknown function DUF6, transmembranechromosome CDS398227 888 + 0.35473
NA Tmden_2046 Diaminopimelate epimerasechromosome CDS2132107 774 - 0.355297
NA Tmden_1757 Lytic transglycosylase, catalyticchromosome CDS1839723 1416 - 0.360876
NA Tmden_0636 Aspartate-semialdehyde dehydrogenase, USG-1 relatedchromosome CDS646952 1035 - 0.36715
NA Tmden_1674 Imidazole glycerol phosphate synthase, glutamine amidotransferase subunitchromosome CDS1757377 624 - 0.362179
NA Tmden_1326 Sodium/proline symporterchromosome CDS1395264 1467 - 0.370825
NA Tmden_0759 Aminotransferase, class I and IIchromosome CDS786997 1137 - 0.350923
NA Tmden_1175 Glutamate synthase, NADH/NADPH, small subunit 2chromosome CDS1229079 1386 - 0.371573
NA Tmden_1108 conserved hypothetical proteinchromosome CDS1164692 324 - 0.339506
NA Tmden_1636 Ribose-phosphate pyrophosphokinasechromosome CDS1717576 927 + 0.389428
NA Tmden_1510 Glutamate dehydrogenase (NADP+)chromosome CDS1583771 1353 + 0.373245
NA Tmden_1749 Binding-protein-dependent transport systems inner membrane componentchromosome CDS1833152 960 - 0.360417
NA Tmden_0875 D-3-phosphoglycerate dehydrogenasechromosome CDS903343 1590 + 0.35283
NA Tmden_0731 Indole-3-glycerol-phosphate synthasechromosome CDS752805 792 + 0.357323
NA Tmden_0309 Chorismate mutasechromosome CDS314848 303 - 0.30033
NA Tmden_1650 Aspartate kinase, monofunctional classchromosome CDS1735240 1212 - 0.366337
NA Tmden_1980 Glycosyl transferase, family 3chromosome CDS2061697 897 - 0.35563
NA Tmden_0789 Threonine synthasechromosome CDS818616 1473 + 0.345553
NA Tmden_1133 Serine O-acetyltransferasechromosome CDS1186375 702 + 0.356125
NA Tmden_1327 Aldehyde dehydrogenasechromosome CDS1396731 3549 - 0.353903
NA Tmden_0073 Aminotransferase, class Vchromosome CDS80317 1113 + 0.397125
NA Tmden_0459 O-acetylhomoserineaminocarboxypropyltransferasechromosome CDS461871 1236 - 0.357605
NA Tmden_0889 ATP phosphoribosyltransferasechromosome CDS920161 630 + 0.373016
NA Tmden_0742 Tryptophan synthase, beta chainchromosome CDS766108 1212 - 0.405116
NA Tmden_1373 Argininosuccinate synthasechromosome CDS1443472 1215 + 0.373663
NA Tmden_0518 conserved hypothetical proteinchromosome CDS518077 852 + 0.373239
NA Tmden_1134 Aminotransferase, class I and IIchromosome CDS1187124 1164 + 0.372852
NA Tmden_0792 Gamma-glutamyl phosphate reductase GPRchromosome CDS821696 1233 + 0.380373
NA Tmden_1875 Phosphoribosyl-AMP cyclohydrolasechromosome CDS1955042 681 - 0.372981
NA Tmden_1141 Acetolactate synthase, large subunit, biosyntheticchromosome CDS1195251 1698 - 0.385748
NA Tmden_0765 O-acetylhomoserine/O-acetylserine sulfhydrylasechromosome CDS791595 1266 - 0.374408
NA Tmden_1866 Histidinol phosphate phosphatase, HisJchromosome CDS1948146 780 + 0.329487
NA Tmden_0866 Argininosuccinate lyasechromosome CDS893236 1383 + 0.355025
NA Tmden_0825 Extracellular ligand-binding receptorchromosome CDS855986 1143 + 0.310586
NA Tmden_0156 Phosphoadenosine phosphosulfate reductase CysH-typechromosome CDS156676 717 + 0.366806
NA Tmden_0816 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes-likechromosome CDS846911 981 - 0.294597
NA Tmden_0620 Peptidase M1, alanyl aminopeptidasechromosome CDS630924 2559 - 0.361079
NA Tmden_0276 hypothetical proteinchromosome CDS294404 597 - 0.355109
NA Tmden_1890 Yeast 2-isopropylmalate synthasechromosome CDS1970163 1659 + 0.371308
NA Tmden_1132 Arginine decarboxylasechromosome CDS1184536 1830 + 0.34918
NA Tmden_1101 3-isopropylmalate dehydrogenasechromosome CDS1158152 1068 - 0.396067
NA Tmden_1277 Anthranilate synthasechromosome CDS1346510 1404 + 0.345442
NA Tmden_0248 histidine kinasechromosome CDS263206 3198 - 0.356473
NA Tmden_1151 Anthranilate phosphoribosyl transferasechromosome CDS1206358 987 - 0.364742
NA Tmden_0070 Major facilitator superfamily MFS_1chromosome CDS77263 1317 - 0.367502
NA Tmden_0094 extracellular solute-binding protein, family 5chromosome CDS100269 1497 + 0.364061
NA Tmden_0541 Ketol-acid reductoisomerasechromosome CDS543824 1023 + 0.390029
NA Tmden_0855 FAD dependent oxidoreductasechromosome CDS883252 1158 - 0.329879
NA Tmden_2048 Spermidine synthase-likechromosome CDS2133479 546 - 0.342491
NA Tmden_1467 Carbamoyl-phosphate synthase, large subunit, glutamine-dependentchromosome CDS1538061 3258 + 0.381215
NA Tmden_0386 Ornithine carbamoyltransferasechromosome CDS387342 939 + 0.390841
NA Tmden_1950 Protein of unknown function DUF6, transmembranechromosome CDS2033479 891 - 0.409652
NA Tmden_0794 hypothetical proteinchromosome CDS823380 1236 + 0.345469
NA Tmden_1947 Glycine hydroxymethyltransferasechromosome CDS2030982 1263 - 0.403009
NA Tmden_0574 Histidinol-phosphate phosphatasechromosome CDS582814 507 + 0.301775
NA Tmden_0568 Glutamine amidotransferase of anthranilate synthasechromosome CDS570415 570 + 0.338596
NA Tmden_0481 Aminotransferase, class I and IIchromosome CDS487420 1185 + 0.389873
NA Tmden_1445 succinyl-diaminopimelate desuccinylasechromosome CDS1512687 1098 - 0.368852
NA Tmden_0830 Selenide water dikinasechromosome CDS861234 978 + 0.368098
NA Tmden_0871 3-phosphoshikimate 1-carboxyvinyltransferasechromosome CDS898934 1287 + 0.379176
NA Tmden_1413 Glutamate 5-kinase, ProB-relatedchromosome CDS1478152 765 - 0.341176
NA Tmden_1824 Glutamate synthase (NADPH)chromosome CDS1908200 2034 - 0.397738
NA Tmden_1020 3-dehydroquinate synthasechromosome CDS1073850 1050 + 0.38
NA Tmden_0273 2-hydroxyglutaryl-CoA dehydratase, D-componentchromosome CDS289407 1269 - 0.378251
NA Tmden_0470 Chorismate mutase, gamma, beta and epsilonchromosome CDS472636 1092 + 0.355311
NA Tmden_1221 HAD-superfamily hydrolase subfamily IB, PSPase-likechromosome CDS1288056 579 + 0.367876
NA Tmden_2031 5-methyltetrahydrofolate--homocysteinemethyltran sferasechromosome CDS2114857 3492 + 0.402921
NA Tmden_0642 nitrogen regulatory protein P-II (GlnB, GlnK)chromosome CDS654245 339 + 0.365782
NA Tmden_0807 hypothetical proteinchromosome CDS842513 486 - 0.255144
NA Tmden_2008 Aminotransferase, class Vchromosome CDS2089846 1215 - 0.3893
NA Tmden_1877 Branched-chain amino acid aminotransferase Ichromosome CDS1956867 921 - 0.384365
NA Tmden_1075 GCN5-related N-acetyltransferasechromosome CDS1137891 462 - 0.339827
NA Tmden_0659 Prephenate dehydrogenasechromosome CDS672772 831 - 0.354994
NA Tmden_1102 3-isopropylmalate dehydratase, small subunitchromosome CDS1159222 504 - 0.35119
NA Tmden_1274 Glycine hydroxymethyltransferasechromosome CDS1343910 1248 + 0.377404
NA Tmden_0712 Oligopeptidase Achromosome CDS731406 1950 - 0.344615
NA Tmden_0734 hypothetical proteinchromosome CDS754985 1296 + 0.3125
NA Tmden_0468 Diaminopimelate decarboxylasechromosome CDS470650 1212 + 0.353135
NA Tmden_0045 putative MFS metabolite transporterchromosome CDS52872 1182 + 0.320643
NA Tmden_1905 Aminotransferase, class I and IIchromosome CDS1988140 1218 - 0.378489
NA Tmden_1120 Leucyl aminopeptidasechromosome CDS1173510 1416 + 0.370057
NA Tmden_0791 Delta 1-pyrroline-5-carboxylate reductasechromosome CDS820861 759 - 0.380764
NA Tmden_1904 Homoserine dehydrogenasechromosome CDS1986839 1263 - 0.362629