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2024-04-29 11:33:03

Gene list

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COG category: Amino acid transport and metabolism
Organism: Pelobacter carbinolicus DSM 2380, DSM 2380

Number of genes found: 215

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Pelobacter carbinolicus DSM 2380, DSM 2380
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Pcar_0492 Spermidine/putrescine-binding periplasmic protein-likechromosome CDS598796 1110 - 0.542342
NA Pcar_2580 glutamate 5-kinasechromosome CDS3028311 1122 - 0.583779
NA Pcar_1903 aspartate-semialdehyde dehydrogenasechromosome CDS2217466 1020 - 0.548039
NA Pcar_0977 Anthranilate/para-aminobenzoate synthases component I-likechromosome CDS1148249 1368 - 0.586988
NA Pcar_1719 O-acetylhomoserine (thiol)-lyasechromosome CDS2010290 1290 - 0.555814
NA Pcar_0234 aminotransferase, class Vchromosome CDS297106 1203 + 0.59601
NA Pcar_0430 lipasechromosome CDS524702 570 - 0.636842
NA Pcar_1904 3-isopropylmalate dehydrogenasechromosome CDS2218557 1098 - 0.569217
NA Pcar_0941 probable lic-1 operon proteinchromosome CDS1110824 1032 + 0.562016
NA Pcar_1867 peptide ABC transporter, permease proteinchromosome CDS2181164 867 - 0.56286
NA Pcar_0733 indole-3-glycerol phosphate synthasechromosome CDS871167 801 + 0.548065
NA Pcar_1442 serine hydroxymethyltransferasechromosome CDS1687867 1251 + 0.528377
NA Pcar_2684 imidazoleglycerol phosphate synthase, cyclase subunitchromosome CDS3137135 768 - 0.575521
NA Pcar_2322 amino-acid N-acetyltransferase / glutamate N-acetyltransferasechromosome CDS2715161 1182 - 0.573604
NA Pcar_2188 3-dehydroquinate dehydratasechromosome CDS2555290 762 - 0.534121
NA Pcar_2688 histidinol dehydrogenasechromosome CDS3140135 1296 - 0.611883
NA Pcar_2283 probable phosphoserine phosphatasechromosome CDS2665161 1197 - 0.597327
NA Pcar_2518 ketol-acid reductoisomerasechromosome CDS2962153 1473 - 0.57298
NA Pcar_0614 phospho-2-dehydro-3-deoxyheptonate aldolasechromosome CDS744008 1068 - 0.580524
NA Pcar_1324 conserved hypothetical proteinchromosome CDS1547828 207 + 0.507246
NA Pcar_2807 hypothetical proteinchromosome CDS3274554 576 + 0.512153
NA Pcar_0416 alanine dehydrogenasechromosome CDS507828 1173 - 0.594203
NA Pcar_0765 ornithine cyclodeaminasechromosome CDS906199 960 - 0.6125
NA Pcar_2468 major facilitator family transporterchromosome CDS2907297 1173 - 0.595055
NA Pcar_2162 conserved hypothetical proteinchromosome CDS2520636 1182 + 0.57868
NA Pcar_0762 phospho-2-dehydro-3-deoxyheptonate aldolasechromosome CDS901966 1041 + 0.580211
NA Pcar_2571 membrane protein, putativechromosome CDS3019800 1101 + 0.616712
NA Pcar_1599 transcriptional regulator, GntR family/aminotransferase class-Ichromosome CDS1867467 1428 - 0.481793
NA Pcar_1646 conserved hypothetical proteinchromosome CDS1920066 1305 - 0.51341
NA Pcar_3103 N-methylhydantoinase Achromosome CDS3619669 1983 + 0.646495
NA Pcar_1244 tryptophan synthase, beta subunitchromosome CDS1461067 1221 - 0.565111
NA Pcar_2579 gamma-glutamyl phosphate reductasechromosome CDS3027008 1257 - 0.593477
NA Pcar_0987 hypothetical proteinchromosome CDS1158719 861 + 0.336818
NA Pcar_1770 phosphoadenosine phosphosulfate reductase, putativechromosome CDS2073006 711 - 0.566807
NA Pcar_2533 glycine cleavage system transcriptional repressor, putativechromosome CDS2975619 540 + 0.538889
NA Pcar_2492 probable sodium/alanine symporterchromosome CDS2930803 1347 + 0.614699
NA Pcar_2095 saccharopine dehydrogenasechromosome CDS2442416 1200 + 0.560833
NA Pcar_0189 Thiamine pyrophosphate-requiring enzymeschromosome CDS240609 1743 + 0.633964
NA Pcar_1898 N-acetyl-gamma-glutamyl-phosphate reductasechromosome CDS2213785 1038 - 0.549133
NA Pcar_2929 hypothetical proteinchromosome CDS3423795 306 + 0.493464
NA Pcar_0330 2,3-butanediol dehydrogenasechromosome CDS414965 1068 + 0.558052
NA Pcar_2614 Xaa-Pro dipeptidase (cobalt-dependent)chromosome CDS3065689 1194 - 0.576214
NA Pcar_1841 putative aminotransferasechromosome CDS2154757 1155 - 0.587879
NA Pcar_0011 probable aminotransferasechromosome CDS15279 1305 + 0.544828
NA Pcar_2325 acetyltransferase, GNAT familychromosome CDS2720313 450 - 0.542222
NA Pcar_0744 conserved hypothetical proteinchromosome CDS883370 1329 + 0.571859
NA Pcar_2628 glutamate synthase-related proteinchromosome CDS3079422 1593 + 0.609542
NA Pcar_1494 hypothetical proteinchromosome CDS1748812 321 + 0.492212
NA Pcar_2418 argininosuccinate lyasechromosome CDS2845082 1386 + 0.593795
NA Pcar_2747 acyl-CoA thioesterasechromosome CDS3205800 588 + 0.583333
NA Pcar_2097 biosynthetic arginine decarboxylasechromosome CDS2445238 1911 + 0.525903
NA Pcar_0732 anthranilate phosphoribosyltransferasechromosome CDS870112 1059 + 0.587347
NA Pcar_1729 aminotransferase, class Vchromosome CDS2022029 1158 + 0.61658
NA Pcar_2420 diaminopimelate decarboxylasechromosome CDS2847352 1254 + 0.578947
NA Pcar_2008 glutamine transport system ATP-binding proteinchromosome CDS2339938 762 - 0.564304
NA Pcar_2096 carboxynorspermidine decarboxylasechromosome CDS2443955 1194 + 0.577052
NA Pcar_2635 conserved hypothetical proteinchromosome CDS3088267 669 + 0.632287
NA Pcar_0238 methylenetetrahydrofolate reductase family proteinchromosome CDS300100 1830 - 0.636066
NA Pcar_2184 putative MFS family transport proteinchromosome CDS2550159 1269 - 0.505122
NA Pcar_3047 lactoylglutathione lyasechromosome CDS3560424 441 - 0.439909
NA Pcar_0422 homoserine O-acetyltransferasechromosome CDS515137 1179 - 0.584394
NA Pcar_2944 glutamate synthase-related proteinchromosome CDS3445723 4542 - 0.616248
NA Pcar_1482 glutamate synthase, large subunitchromosome CDS1730476 4422 + 0.621212
NA Pcar_1732 related to 5,10-methylenetetrahydrofolate reductasechromosome CDS2026001 906 + 0.57947
NA Pcar_1906 3-isopropylmalate dehydratase, large subunit, putativechromosome CDS2220453 1281 - 0.549571
NA Pcar_1573 aspartate aminotransferasechromosome CDS1840195 1272 - 0.569182
NA Pcar_1630 aspartate ammonia-lyase, putativechromosome CDS1904266 1413 - 0.548478
NA Pcar_1215 conserved hypothetical proteinchromosome CDS1422924 654 + 0.626911
NA Pcar_2588 branched-chain amino acid aminotransferasechromosome CDS3037298 1065 + 0.580282
NA Pcar_2004 ribose-phosphate pyrophosphokinasechromosome CDS2335369 939 - 0.550586
NA Pcar_0041 Na+/proline symporter-likechromosome CDS45910 1407 - 0.609808
NA Pcar_2442 probable L-lysine aminotransferasechromosome CDS2874514 1362 - 0.591777
NA Pcar_0916 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G)-likechromosome CDS1082496 924 + 0.419913
NA Pcar_2991 hypothetical proteinchromosome CDS3501498 369 + 0.626016
NA Pcar_2150 shikimate 5-dehydrogenasechromosome CDS2503743 852 - 0.561033
NA Pcar_1911 dihydroxy-acid dehydratasechromosome CDS2227067 1671 - 0.575703
NA Pcar_1245 integral membrane protein, putative permeasechromosome CDS1462499 933 - 0.566988
NA Pcar_2414 acetylornithine aminotransferasechromosome CDS2840524 1191 + 0.61461
NA Pcar_1024 uncharacterized protein involved in cysteine biosynthesischromosome CDS1201801 777 + 0.525097
NA Pcar_0190 probable amino acid transporterchromosome CDS242563 1359 - 0.629139
NA Pcar_0506 lactoylglutathione lyasechromosome CDS616640 381 - 0.524934
NA Pcar_1962 xaa-pro dipeptidasechromosome CDS2283352 1218 - 0.589491
NA Pcar_0504 hypothetical proteinchromosome CDS614633 450 - 0.535556
NA Pcar_2240 probable tryptophan synthase, beta subunitchromosome CDS2613947 1227 + 0.616952
NA Pcar_1869 peptide ABC transporter, permease proteinchromosome CDS2182708 975 - 0.553846
NA Pcar_1477 lactoylglutathione lyasechromosome CDS1725331 411 + 0.542579
NA Pcar_0907 oligopeptide ABC transporter ATP-binding proteinchromosome CDS1070978 957 - 0.596656
NA Pcar_1910 acetolactate synthase, large subunit, biosynthetic typechromosome CDS2225294 1698 - 0.546525
NA Pcar_2726 conserved hypothetical proteinchromosome CDS3182942 984 + 0.568089
NA Pcar_1776 shikimate kinasechromosome CDS2078672 513 - 0.573099
NA Pcar_3074 diaminopimelate epimerasechromosome CDS3587753 840 - 0.554762
NA Pcar_0491 Ethanolamine ammonia-lyase large subunit-likechromosome CDS596423 2262 - 0.567197
NA Pcar_1398 conserved hypothetical proteinchromosome CDS1641577 966 - 0.594203
NA Pcar_1799 hypothetical proteinchromosome CDS2101116 1377 - 0.341322
NA Pcar_2503 pyridine nucleotide-disulfide oxidoreductasechromosome CDS2943274 1992 - 0.576305
NA Pcar_1612 carbamoyl-phosphate synthase, large subunitchromosome CDS1882710 3255 - 0.541628
NA Pcar_2133 chorismate synthasechromosome CDS2483954 1164 - 0.560997
NA Pcar_0397 pyrroline-5-carboxylate reductasechromosome CDS488525 813 + 0.628536
NA Pcar_0221 Fe-S oxidoreductasechromosome CDS285012 2316 + 0.560449
NA Pcar_1500 nitrogen regulatory protein P-II (GlnB, GlnK)chromosome CDS1754971 339 + 0.474926
NA Pcar_2722 5-methyltetrahydrofolate-homocysteine methyltransferase, truncationchromosome CDS3178557 2406 - 0.620532
NA Pcar_2772 phosphoserine aminotransferase, putativechromosome CDS3231308 1077 + 0.585887
NA Pcar_1323 chorismate mutase domain proteinchromosome CDS1547552 273 + 0.512821
NA Pcar_0442 methionine synthase, vitamin-B12 independentchromosome CDS539013 2277 + 0.556873
NA Pcar_2600 pyridine nucleotide-disulfide oxidoreductasechromosome CDS3051414 2316 + 0.601036
NA Pcar_1501 glutamine synthetase, type Ichromosome CDS1755368 1410 + 0.530496
NA Pcar_2599 glutamate synthase, alpha subunit-likechromosome CDS3049756 1644 + 0.613139
NA Pcar_0575 3-isopropylmalate dehydrogenasechromosome CDS698255 1077 - 0.592386
NA Pcar_0822 selenide, water dikinase, selenocysteine-containingchromosome CDS972212 981 + 0.61264
NA Pcar_0731 anthranilate synthase component IIchromosome CDS869523 567 + 0.525573
NA Pcar_1021 nitrogen regulatory protein P-II (GlnB, GlnK)chromosome CDS1199141 339 + 0.510324
NA Pcar_1007 2-isopropylmalate synthase/homocitrate synthase family proteinchromosome CDS1178961 1575 + 0.540317
NA Pcar_1870 peptide ABC transporter, periplasmic peptide-binding proteinchromosome CDS2183696 1623 - 0.561306
NA Pcar_0231 molydbenum ABC transporter, ATP-binding proteinchromosome CDS295217 708 + 0.543785
NA Pcar_2625 multidrug resistance transporter, Bcr/CflA familychromosome CDS3076216 1212 - 0.59571
NA Pcar_2287 putative peptidasechromosome CDS2669289 1371 - 0.625091
NA Pcar_0921 amino acid efflux proteinchromosome CDS1086879 618 + 0.407767
NA Pcar_3005 cysteine synthase Bchromosome CDS3516070 927 - 0.585761
NA Pcar_1887 chorismate mutase/prephenate dehydratasechromosome CDS2200860 1083 - 0.548476
NA Pcar_1483 glutamate synthase small chainchromosome CDS1735038 1398 + 0.628755
NA Pcar_0333 hypothetical proteinchromosome CDS416949 492 + 0.497967
NA Pcar_2024 phosphoribosyl-AMP cyclohydrolasechromosome CDS2354877 378 - 0.473545
NA Pcar_0484 related to aminotransferase and cobyric acid synthase (CobD and CobQ)chromosome CDS588113 2595 - 0.613873
NA Pcar_2471 putative peptidase Tchromosome CDS2911981 1137 - 0.598945
NA Pcar_1756 hypothetical proteinchromosome CDS2053958 1536 + 0.486328
NA Pcar_0784 conserved hypothetical proteinchromosome CDS928223 627 + 0.4689
NA Pcar_0186 S-adenosylmethionine synthetase family proteinchromosome CDS233086 1203 - 0.613466
NA Pcar_0468 Spermidine/putrescine-binding periplasmic protein-likechromosome CDS570236 1119 - 0.565684
NA Pcar_2687 imidazoleglycerol-phosphate dehydratasechromosome CDS3139471 588 - 0.559524
NA Pcar_1613 carbamoyl-phosphate synthase, small subunitchromosome CDS1886043 1131 - 0.539346
NA Pcar_2683 phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphatasechromosome CDS3136466 642 - 0.590343
NA Pcar_3115 D-3-phosphoglycerate dehydrogenasechromosome CDS3632946 1608 + 0.574005
NA Pcar_2735 hypothetical proteinchromosome CDS3195085 864 - 0.574074
NA Pcar_2540 glycine cleavage system H proteinchromosome CDS2982478 408 + 0.514706
NA Pcar_1735 ABC-type spermidine/putrescine transport systems ATPase components-likechromosome CDS2031004 1131 - 0.515473
NA Pcar_1909 acetolactate synthase, small subunitchromosome CDS2224775 507 - 0.532544
NA Pcar_1886 prephenate dehydrogenasechromosome CDS2199950 867 - 0.584775
NA Pcar_1401 probable L-lysine 2,3-aminomutasechromosome CDS1645986 1374 + 0.510917
NA Pcar_3104 N-methylhydantoinase Bchromosome CDS3621648 1614 + 0.645601
NA Pcar_2132 3-dehydroquinate synthasechromosome CDS2482758 1089 - 0.500459
NA Pcar_0275 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases-likechromosome CDS343238 1206 + 0.63267
NA Pcar_2586 putative histidinol phosphatasechromosome CDS3036063 723 + 0.618257
NA Pcar_0734 N-(5'phosphoribosyl)anthranilate isomerasechromosome CDS872052 627 + 0.585327
NA Pcar_0976 branched-chain amino acid aminotransferasechromosome CDS1147416 837 - 0.626045
NA Pcar_2686 imidazole glycerol phosphate synthase, glutamine amidotransferase subunitchromosome CDS3138847 621 - 0.573269
NA Pcar_0050 cysteine desulfurasechromosome CDS59568 1224 - 0.603758
NA Pcar_2120 conserved hypothetical proteinchromosome CDS2471024 1170 - 0.470085
NA Pcar_1885 3-phosphoshikimate 1-carboxyvinyltransferasechromosome CDS2198609 1296 - 0.57716
NA Pcar_2689 ATP phosphoribosyltransferasechromosome CDS3141442 660 - 0.574242
NA Pcar_2189 putative MFS family transport proteinchromosome CDS2556100 1227 - 0.526487
NA Pcar_2413 acetylglutamate kinasechromosome CDS2839637 891 + 0.571268
NA Pcar_2422 dihydrodipicolinate reductasechromosome CDS2849582 804 + 0.60199
NA Pcar_1450 hypothetical proteinchromosome CDS1694557 459 + 0.579521
NA Pcar_2520 L-lysine 2,3-aminomutasechromosome CDS2964859 1044 - 0.617816
NA Pcar_1032 oxalate/formate antiporter (OxlT-2)chromosome CDS1207581 1215 - 0.590123
NA Pcar_2430 cysteine synthase Achromosome CDS2861647 921 + 0.623236
NA Pcar_2857 membrane protein, putativechromosome CDS3343520 528 + 0.551136
NA Pcar_2181 antibiotic resistance protein-likechromosome CDS2546563 1209 + 0.533499
NA Pcar_1888 aspartate aminotransferasechromosome CDS2202117 1191 + 0.563392
NA Pcar_1102 probable transport transmembrane proteinchromosome CDS1297663 1263 + 0.601742
NA Pcar_1453 O-acetyl-L-homoserine sulfhydrylasechromosome CDS1697219 1293 - 0.551431
NA Pcar_1649 aminopeptidase Nchromosome CDS1923923 2667 - 0.518185
NA Pcar_1831 NAD-specific glutamate dehydrogenase-likechromosome CDS2140875 4797 - 0.600792
NA Pcar_1006 aspartate kinase, monofunctional classchromosome CDS1177685 1233 + 0.51987
NA Pcar_0895 probable transport system ATP-binding proteinchromosome CDS1052983 1068 + 0.596442
NA Pcar_0680 aspartate aminotransferasechromosome CDS826939 1164 - 0.58677
NA Pcar_2423 aromatic aminotransferase, putativechromosome CDS2850529 1233 + 0.58232
NA Pcar_0730 anthranilate synthase component Ichromosome CDS868037 1485 + 0.515152
NA Pcar_2979 threonine dehydratasechromosome CDS3488724 1248 + 0.623397
NA Pcar_2083 acetylornithine aminotransferase, putativechromosome CDS2428373 1377 - 0.562818
NA Pcar_1718 cysteine synthasechromosome CDS2009287 927 - 0.541532
NA Pcar_1769 sulfate adenylyltransferase, subunit 2chromosome CDS2071290 894 - 0.54698
NA Pcar_2180 putative zinc-binding dehydrogenasechromosome CDS2544782 984 + 0.539634
NA Pcar_0783 membrane transport proteinchromosome CDS926812 1197 + 0.50543
NA Pcar_2129 xaa-pro dipeptidasechromosome CDS2480296 1092 - 0.558608
NA Pcar_0417 D-3-phosphoglycerate dehydrogenasechromosome CDS509005 1605 - 0.562617
NA Pcar_2295 probable glutamate synthase small chainchromosome CDS2676454 1239 + 0.558515
NA Pcar_2609 hypothetical proteinchromosome CDS3061604 627 + 0.575758
NA Pcar_3031 putative aminotransferasechromosome CDS3541600 1146 + 0.625654
NA Pcar_2417 argininosuccinate synthasechromosome CDS2843653 1221 + 0.596233
NA Pcar_2421 dihydrodipicolinate synthasechromosome CDS2848675 882 + 0.56576
NA Pcar_0629 D-3-phosphoglycerate dehydrogenasechromosome CDS756238 966 - 0.597309
NA Pcar_2174 shikimate kinasechromosome CDS2538570 519 - 0.587669
NA Pcar_2178 3-dehydroquinate dehydratase, type IIchromosome CDS2543132 447 + 0.532438
NA Pcar_2192 shikimate 5-dehydrogenasechromosome CDS2558751 834 - 0.557554
NA Pcar_2685 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerasechromosome CDS3138116 732 - 0.613388
NA Pcar_1907 2-isopropylmalate synthasechromosome CDS2221791 1542 - 0.56096
NA Pcar_2387 conserved hypothetical proteinchromosome CDS2811857 1131 + 0.526967
NA Pcar_1502 threonine synthasechromosome CDS1756963 1392 - 0.545259
NA Pcar_2052 membrane protein, putativechromosome CDS2390196 1905 - 0.56063
NA Pcar_0200 aminopeptidase A/Ichromosome CDS257394 1494 + 0.617135
NA Pcar_0752 glutamate synthase (NADPH), homotetramericchromosome CDS890728 1413 - 0.59448
NA Pcar_1862 serine acetyltransferasechromosome CDS2176650 750 - 0.56
NA Pcar_1860 cysteine desulfurasechromosome CDS2174989 1212 - 0.579208
NA Pcar_0467 Ethanolamine ammonia-lyase large subunit-likechromosome CDS567845 2202 - 0.564941
NA Pcar_1237 glutamate dehydrogenase (NAD(P)+)chromosome CDS1452239 1113 + 0.566936
NA Pcar_2241 related to tryptophan synthase, alpha subunitchromosome CDS2615166 762 + 0.589239
NA Pcar_2415 ornithine carbamoyltransferasechromosome CDS2841772 909 + 0.583058
NA Pcar_1520 conserved hypothetical proteinchromosome CDS1781963 984 + 0.468496
NA Pcar_0819 L-seryl-tRNA selenium transferasechromosome CDS968708 1386 - 0.604618
NA Pcar_1013 hypothetical proteinchromosome CDS1187913 1032 - 0.494186
NA Pcar_1905 3-isopropylmalate dehydratase, small subunit, putativechromosome CDS2219883 531 - 0.532957
NA Pcar_2598 conserved hypothetical proteinchromosome CDS3048662 1107 + 0.567299
NA Pcar_1283 hydrolase, HAD-superfamilychromosome CDS1505063 609 + 0.581281
NA Pcar_1451 homoserine dehydrogenasechromosome CDS1695210 1311 + 0.525553
NA Pcar_0321 histidinol-phosphate aminotransferasechromosome CDS402561 1044 + 0.571839
NA Pcar_0975 probable lic-1 operon proteinchromosome CDS1145451 1041 - 0.584054
NA Pcar_1121 acetolactate synthase large subunitchromosome CDS1316871 1692 - 0.622931
NA Pcar_0906 oligopeptide ABC transporter ATP-binding proteinchromosome CDS1069989 993 - 0.613293
NA Pcar_2110 homocitrate synthasechromosome CDS2459719 1203 + 0.567747
NA Pcar_1018 peptidylarginine deiminase-related proteinchromosome CDS1193388 1026 - 0.564327
NA Pcar_2986 hypothetical proteinchromosome CDS3495147 495 + 0.543434
NA Pcar_1534 cysteine synthasechromosome CDS1797283 897 + 0.460424
NA Pcar_3113 phospho-2-dehydro-3-deoxyheptonate aldolasechromosome CDS3631384 1020 + 0.602941
NA Pcar_0304 selenocysteine lyasechromosome CDS383714 1146 + 0.623909