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2024-05-05 14:37:55

Gene list

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COG category: Amino acid transport and metabolism
Organism: Nitrosococcus oceani ATCC 19707, ATCC 19707

Number of genes found: 208

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Nitrosococcus oceani ATCC 19707, ATCC 19707
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Noc_0253 3-dehydroquinate synthasechromosome CDS279084 1080 + 0.50463
NA Noc_0891 transcriptional regulator, GntRfamily, with Aminotransferase domainchromosome CDS971206 1515 - 0.489769
NA Noc_0881 Aspartate/tyrosine/aromatic aminotransferasechromosome CDS962661 1158 + 0.51209
NA Noc_0842 Cystathionine gamma-synthasechromosome CDS919628 1197 + 0.511278
NA Noc_1978 conserved hypothetical proteinchromosome CDS2271786 1533 - 0.506197
NA Noc_2453 Threonine synthasechromosome CDS2798828 1083 - 0.518006
NA Noc_1029 Aspartate/glutamate/uridylate kinasechromosome CDS1138629 1443 + 0.523216
NA Noc_1016 Aspartate-semialdehyde dehydrogenase, USG-1 relatedchromosome CDS1125035 1023 + 0.521994
NA Noc_2520 Acetolactate synthase, large subunit, biosynthetic typechromosome CDS2868358 1749 - 0.502001
NA Noc_2126 succinyl-diaminopimelate desuccinylasechromosome CDS2449090 1131 + 0.514589
NA Noc_1151 O-succinylhomoserine sulfhydrylasechromosome CDS1258904 1200 + 0.504167
NA Noc_0653 conserved hypothetical proteinchromosome CDS701746 1566 + 0.58046
NA Noc_1278 conserved hypothetical membrane proteinchromosome CDS1419126 531 + 0.483992
NA Noc_0983 Ribose-phosphate pyrophosphokinasechromosome CDS1085862 999 + 0.447447
NA Noc_0429 Arylesterasechromosome CDS470424 609 + 0.545156
NA Noc_0174 Chorismate mutasechromosome CDS193581 1086 + 0.517495
NA Noc_1656 Aminotransferase, class Vchromosome CDS1850459 1134 + 0.422399
NA Noc_2978 NAD-glutamate dehydrogenasechromosome CDS3364313 4785 + 0.440961
NA Noc_2504 Phosphoserine phosphatase SerBchromosome CDS2849369 837 + 0.450418
NA Noc_2995 Acetylglutamate kinasechromosome CDS3388912 906 + 0.46468
NA Noc_2935 3-isopropylmalate dehydratase large subunit regionchromosome CDS3320347 1410 - 0.57305
NA Noc_2608 Peptidase M24chromosome CDS2962411 1314 + 0.516743
NA Noc_1431 hypothetical proteinchromosome CDS1587497 597 - 0.495812
NA Noc_0678 hypothetical proteinchromosome CDS735288 273 + 0.564103
NA Noc_2881 Ureasechromosome CDS3261359 306 - 0.522876
NA Noc_1975 Asparagine synthase, glutamine-hydrolyzingchromosome CDS2267359 1932 - 0.521222
NA Noc_2516 2-isopropylmalate synthasechromosome CDS2863971 1536 - 0.505859
NA Noc_2185 ABC transporter, inner membrane subunitchromosome CDS2525096 930 - 0.554839
NA Noc_1561 Diaminobutyrate-2-oxoglutarate transaminasechromosome CDS1735607 1302 - 0.475422
NA Noc_2850 Glutamate N-acetyltransferasechromosome CDS3226787 1218 - 0.529557
NA Noc_1957 Orn/DAP/Arg decarboxylase 2chromosome CDS2243015 1233 + 0.532036
NA Noc_0781 Amidase, hydantoinase/carbamoylasechromosome CDS853870 1239 - 0.5682
NA Noc_2771 ABC transporter, inner membrane subunitchromosome CDS3145055 1377 + 0.564996
NA Noc_1913 hypothetical proteinchromosome CDS2190554 1281 + 0.483997
NA Noc_3056 Phosphoribosyl-ATP pyrophosphohydrolasechromosome CDS3448872 315 + 0.492063
NA Noc_1711 Ornithine aminotransferasechromosome CDS1915207 1230 - 0.545528
NA Noc_1424 hypothetical proteinchromosome CDS1579844 591 - 0.526227
NA Noc_0566 Glyoxalase/bleomycin resistance protein/dioxygenasechromosome CDS614936 441 + 0.442177
NA Noc_3053 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerasechromosome CDS3446954 750 + 0.497333
NA Noc_2455 Aminotransferase, class I and IIchromosome CDS2801347 1182 - 0.501692
NA Noc_2607 Acetylornithine deacetylase (ArgE)chromosome CDS2961181 1140 + 0.488596
NA Noc_0136 Branched-chain amino acid aminotransferase Ichromosome CDS149126 930 + 0.521505
NA Noc_1739 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferasechromosome CDS1951483 2277 - 0.523496
NA Noc_1547 Major facilitator superfamily MFS_1chromosome CDS1716918 1344 + 0.513393
NA Noc_1815 hypothetical proteinchromosome CDS2056438 1188 + 0.601852
NA Noc_0952 Glyoxalase/bleomycin resistance protein/dioxygenasechromosome CDS1050595 399 - 0.491228
NA Noc_2777 Histidinol-phosphate aminotransferasechromosome CDS3153557 1083 - 0.522622
NA Noc_1662 Aminotransferase, class IVchromosome CDS1855858 822 - 0.445255
NA Noc_0992 conserved hypothetical proteinchromosome CDS1098727 1200 - 0.494167
NA Noc_2714 O-acetylhomoserine/O-acetylserine sulfhydrylasechromosome CDS3078520 1272 + 0.561321
NA Noc_0435 Zinc-containing alcohol dehydrogenase superfamilychromosome CDS473378 1056 - 0.58428
NA Noc_0314 Diaminopimelate decarboxylasechromosome CDS340167 1254 + 0.529506
NA Noc_1575 Sodium/proline symporterchromosome CDS1748846 1497 - 0.542418
NA Noc_2652 Glutamine synthetase type Ichromosome CDS3004608 1410 - 0.476596
NA Noc_2680 5,10-methylenetetrahydrofolate reductasechromosome CDS3036542 894 + 0.50783
NA Noc_2124 Aminotransferase, class I and IIchromosome CDS2447006 1200 + 0.525833
NA Noc_1604 Glutamate synthase (ferredoxin)chromosome CDS1786948 4665 - 0.555198
NA Noc_2290 Adenylylsulfate reductase, thioredoxin dependentchromosome CDS2643429 714 - 0.463585
NA Noc_3051 Imidazoleglycerol-phosphate dehydratasechromosome CDS3445658 594 + 0.498316
NA Noc_2447 Porphyromonas-type peptidyl-arginine deiminasechromosome CDS2792556 1074 + 0.515829
NA Noc_0501 Argininosuccinate lyasechromosome CDS540703 1404 - 0.536325
NA Noc_0558 Spermine synthasechromosome CDS603667 855 + 0.512281
NA Noc_1768 extracellular solute-binding protein, family 5chromosome CDS1990694 2250 - 0.518667
NA Noc_2604 Pyridoxal-5'-phosphate-dependent enzyme, beta subunitchromosome CDS2957633 903 + 0.521595
NA Noc_2772 ABC transporter, inner membrane subunitchromosome CDS3146486 1137 + 0.5708
NA Noc_2187 hypothetical proteinchromosome CDS2526901 603 + 0.46932
NA Noc_3063 Amino acid permease-associated regionchromosome CDS3452086 1407 + 0.501777
NA Noc_2494 Anthranilate synthase component Ichromosome CDS2839658 1479 + 0.490196
NA Noc_0557 Arginine decarboxylasechromosome CDS601566 1890 - 0.528571
NA Noc_2013 Amino-acid N-acetyltransferasechromosome CDS2322107 1383 + 0.519161
NA Noc_1796 Glucose-methanol-choline oxidoreductasechromosome CDS2026076 2112 - 0.546875
NA Noc_2547 Glycine dehydrogenase (decarboxylating)chromosome CDS2895433 1461 + 0.572211
NA Noc_1622 DAHP synthetase I/KDSAchromosome CDS1811990 1113 - 0.477089
NA Noc_0163 hypothetical proteinchromosome CDS179480 300 + 0.51
NA Noc_3036 Glutamate 5-kinase, ProB-relatedchromosome CDS3432108 1128 + 0.535461
NA Noc_0289 Leucyl aminopeptidasechromosome CDS315951 1506 - 0.553121
NA Noc_0652 conserved hypothetical proteinchromosome CDS700045 1341 + 0.577927
NA Noc_3052 Imidazole glycerol phosphate synthase, glutamine amidotransferase subunitchromosome CDS3446269 630 + 0.509524
NA Noc_0176 Prephenate dehydrogenasechromosome CDS195792 861 + 0.526132
NA Noc_3002 Delta 1-pyrroline-5-carboxylate reductasechromosome CDS3394213 837 - 0.540024
NA Noc_0539 ABC transporter, ATPase subunitchromosome CDS577502 756 + 0.521164
NA Noc_0471 Pyruvate oxidasechromosome CDS505981 1806 - 0.560908
NA Noc_2519 Acetolactate synthase, small subunitchromosome CDS2867862 495 - 0.476768
NA Noc_2001 Dihydroxy-acid dehydratasechromosome CDS2306097 1854 - 0.529666
NA Noc_1965 Asparagine synthase, glutamine-hydrolyzingchromosome CDS2250490 1824 - 0.515899
NA Noc_2495 Glutamine amidotransferase of anthranilate synthasechromosome CDS2841148 582 + 0.458763
NA Noc_0951 Adenosylmethionine decarboxylasechromosome CDS1049691 831 - 0.434416
NA Noc_2573 Carbamoyl-phosphate synthase, small subunitchromosome CDS2927036 1146 - 0.514834
NA Noc_2631 D-alanine transaminasechromosome CDS2985355 903 - 0.492802
NA Noc_2034 hypothetical proteinchromosome CDS2345971 414 - 0.565217
NA Noc_1315 Aminotransferase, class Vchromosome CDS1463273 1071 - 0.52381
NA Noc_1138 Aminotransferase, class I and IIchromosome CDS1244718 1188 - 0.51936
NA Noc_2054 Glu/Leu/Phe/Val dehydrogenasechromosome CDS2363706 1260 - 0.53254
NA Noc_0514 Ribose-phosphate pyrophosphokinasechromosome CDS555313 1011 + 0.519288
NA Noc_2779 ATP phosphoribosyltransferasechromosome CDS3156127 642 - 0.504673
NA Noc_1314 Peptidase M, neutral zinc metallopeptidases, zinc-binding sitechromosome CDS1460116 2652 - 0.477753
NA Noc_2681 Glyoxalase Ichromosome CDS3037443 384 + 0.494792
NA Noc_2711 Sodium/alanine symporterchromosome CDS3075688 1371 - 0.576222
NA Noc_2579 Peptidase M24chromosome CDS2931676 1332 + 0.528529
NA Noc_2027 Glycine hydroxymethyltransferasechromosome CDS2338734 1254 - 0.500797
NA Noc_0378 5-oxoprolinase (ATP-hydrolyzing)chromosome CDS415916 3681 + 0.554741
NA Noc_1459 Peptidase M28chromosome CDS1615646 3312 - 0.58756
NA Noc_2606 Threonine aldolasechromosome CDS2960141 1041 + 0.51585
NA Noc_0374 Histidinol-phosphate phosphatasechromosome CDS411469 540 + 0.514815
NA Noc_0934 ABC transporter, inner membrane subunitchromosome CDS1031714 1413 + 0.492569
NA Noc_2627 Protein of unknown function DUF160chromosome CDS2981254 1008 + 0.531746
NA Noc_2289 Sulfate adenylyltransferase, small subunitchromosome CDS2642453 906 - 0.484547
NA Noc_2487 Cysteine desulphurases, SufSchromosome CDS2832448 1263 - 0.49327
NA Noc_1019 Phosphoribosylanthranilate isomerasechromosome CDS1129957 621 + 0.516908
NA Noc_1013 3-isopropylmalate dehydratase small subunit regionchromosome CDS1121378 645 + 0.499225
NA Noc_2454 Homoserine dehydrogenasechromosome CDS2800000 1311 - 0.521739
NA Noc_2184 ABC transporter, inner membrane subunitchromosome CDS2524296 804 - 0.574627
NA Noc_1436 Glu/Leu/Phe/Val dehydrogenasechromosome CDS1592460 1128 - 0.522163
NA Noc_1559 Major facilitator superfamily MFS_1chromosome CDS1732474 1365 - 0.522344
NA Noc_1078 putative dehydrogenasechromosome CDS1183345 1032 - 0.537791
NA Noc_1949 HAD-superfamily hydrolase subfamily IB, PSPase-likechromosome CDS2233602 630 - 0.506349
NA Noc_2662 Gamma-glutamyl phosphate reductase GPRchromosome CDS3016157 1257 - 0.520286
NA Noc_0467 Glucose-methanol-choline oxidoreductasechromosome CDS501414 1647 + 0.617486
NA Noc_2572 Carbamoyl-phosphate synthase, large subunit, glutamine-dependentchromosome CDS2923737 3222 - 0.511484
NA Noc_0769 Gamma-glutamyltransferasechromosome CDS836945 1674 + 0.611111
NA Noc_1491 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 1chromosome CDS1650427 1101 - 0.525886
NA Noc_1226 conserved hypothetical proteinchromosome CDS1342403 1554 + 0.495495
NA Noc_1266 Acetolactate synthase large subunitchromosome CDS1396521 1809 + 0.538972
NA Noc_2770 extracellular solute-binding protein, family 5chromosome CDS3143180 1857 + 0.544965
NA Noc_1206 5-methyltetrahydrofolate--homocysteinemethyltran sferasechromosome CDS1316055 3699 - 0.557448
NA Noc_2269 FAD dependent oxidoreductasechromosome CDS2616405 1131 - 0.575597
NA Noc_0175 Histidinol-phosphate aminotransferasechromosome CDS194683 1113 + 0.495058
NA Noc_2880 Urease, alpha subunitchromosome CDS3259662 1701 - 0.539683
NA Noc_0343 hypothetical proteinchromosome CDS374207 1179 - 0.584394
NA Noc_0500 Glycine cleavage system T proteinchromosome CDS539591 1116 + 0.557348
NA Noc_0908 Glycine dehydrogenase (decarboxylating)chromosome CDS992105 1359 + 0.513613
NA Noc_1156 Peptidase S9, prolyl oligopeptidase active site regionchromosome CDS1263282 1932 + 0.536232
NA Noc_2497 Indole-3-glycerol-phosphate synthasechromosome CDS2842806 816 + 0.454657
NA Noc_1628 conserved hypothetical proteinchromosome CDS1820665 387 - 0.478036
NA Noc_2017 HAD-superfamily subfamily IB, PSPase-likechromosome CDS2327864 729 - 0.469136
NA Noc_2803 Nucleoside/H+ symporter, Major facilitator superfamily MFS_1chromosome CDS3175927 1155 + 0.505628
NA Noc_1712 Arginase/agmatinase/formiminoglutamasechromosome CDS1916393 930 - 0.551613
NA Noc_2429 Acetylornithine and succinylornithine aminotransferasechromosome CDS2776114 1182 + 0.530457
NA Noc_1154 Lipolytic enzyme, G-D-S-Lchromosome CDS1261791 642 + 0.482866
NA Noc_1014 3-isopropylmalate dehydrogenasechromosome CDS1122030 1089 + 0.568411
NA Noc_2809 Dihydrodipicolinate reductasechromosome CDS3184574 816 - 0.504902
NA Noc_0933 ABC transporter, inner membrane subunitchromosome CDS1030732 978 + 0.44274
NA Noc_2938 Chorismate synthasechromosome CDS3326815 1110 - 0.569369
NA Noc_2767 Glyoxalase/bleomycin resistance protein/dioxygenasechromosome CDS3139657 465 - 0.475269
NA Noc_0097 hypothetical proteinchromosome CDS97494 555 + 0.473874
NA Noc_2128 Aminotransferase, class Vchromosome CDS2451338 1176 - 0.518707
NA Noc_3055 Phosphoribosyl-AMP cyclohydrolasechromosome CDS3448481 399 + 0.483709
NA Noc_2666 Threonine dehydratase Ichromosome CDS3021589 1530 - 0.523529
NA Noc_0715 Nitrogen regulatory protein P-IIchromosome CDS773745 339 + 0.495575
NA Noc_1699 Protein of unknown function DUF540chromosome CDS1902018 786 + 0.46056
NA Noc_1600 Na+/solute symporterchromosome CDS1779335 1422 - 0.54571
NA Noc_0496 Glyoxalase/bleomycin resistance protein/dioxygenasechromosome CDS534805 393 - 0.493639
NA Noc_1544 conserved hypothetical proteinchromosome CDS1714217 432 - 0.550926
NA Noc_0316 Diaminopimelate epimerasechromosome CDS342181 831 + 0.555957
NA Noc_0177 3-phosphoshikimate 1-carboxyvinyltransferasechromosome CDS196685 1335 + 0.531086
NA Noc_0779 Na+/solute symporterchromosome CDS851675 1449 - 0.545204
NA Noc_2940 conserved hypothetical proteinchromosome CDS3328410 777 - 0.517375
NA Noc_1904 hypothetical proteinchromosome CDS2176196 279 + 0.387097
NA Noc_2125 2,3,4,5-tetrahydropyridine-2-carboxylateN-succin yltransferasechromosome CDS2448229 822 + 0.491484
NA Noc_0155 hypothetical proteinchromosome CDS167427 498 + 0.391566
NA Noc_1603 Glutamate synthase, NADH/NADPH, small subunit 1chromosome CDS1785513 1443 - 0.587665
NA Noc_1649 Aminotransferase, class Vchromosome CDS1843869 1158 + 0.474957
NA Noc_0797 Cysteine synthasechromosome CDS869367 900 + 0.541111
NA Noc_2496 Anthranilate phosphoribosyl transferasechromosome CDS2841760 1017 + 0.499508
NA Noc_2478 Asparagine synthase, glutamine-hydrolyzingchromosome CDS2822455 1983 - 0.514372
NA Noc_2524 Dihydrodipicolinate synthase subfamilychromosome CDS2873217 879 - 0.497156
NA Noc_0777 Asparagine synthase, glutamine-hydrolyzingchromosome CDS848335 2013 - 0.564829
NA Noc_0454 membrane protein, putativechromosome CDS488237 909 - 0.553355
NA Noc_1944 hypothetical proteinchromosome CDS2226213 1746 + 0.505155
NA Noc_2430 Ornithine carbamoyltransferasechromosome CDS2777310 915 + 0.501639
NA Noc_0101 Ferredoxin-dependent glutamate synthasechromosome CDS102414 1656 + 0.556159
NA Noc_1053 3-dehydroquinate dehydratasechromosome CDS1160070 444 - 0.463964
NA Noc_2778 Histidinol dehydrogenasechromosome CDS3154833 1302 - 0.546851
NA Noc_0255 Para-aminobenzoate synthase, component Ichromosome CDS280895 1416 - 0.523305
NA Noc_2518 Ketol-acid reductoisomerasechromosome CDS2866588 1017 - 0.485742
NA Noc_1020 Tryptophan synthase, beta chainchromosome CDS1130615 1185 + 0.555274
NA Noc_0864 Glutamate dehydrogenase (NADP+)chromosome CDS946897 1347 - 0.556793
NA Noc_2575 Quinate/Shikimate 5-dehydrogenasechromosome CDS2929403 849 + 0.500589
NA Noc_0346 Alanine dehydrogenase and pyridine nucleotide transhydrogenasechromosome CDS378131 1074 + 0.534451
NA Noc_1765 conserved hypothetical protein-transmembrane predictionchromosome CDS1986205 378 - 0.587302
NA Noc_0592 Zinc-containing alcohol dehydrogenase superfamilychromosome CDS637749 1206 - 0.575456
NA Noc_1859 hypothetical proteinchromosome CDS2112945 789 - 0.515843
NA Noc_2108 Argininosuccinate synthasechromosome CDS2424013 1218 - 0.498358
NA Noc_1888 Pyruvate carboxyltransferasechromosome CDS2152365 921 - 0.58089
NA Noc_0927 Aspartate kinasechromosome CDS1023885 1242 + 0.485507
NA Noc_2983 Aromatic-L-amino-acid decarboxylasechromosome CDS3375359 1491 - 0.531187
NA Noc_0173 D-isomer specific 2-hydroxyacid dehydrogenasechromosome CDS192378 1164 + 0.50945
NA Noc_2999 Major facilitator superfamily MFS_1chromosome CDS3392163 1167 + 0.496144
NA Noc_2882 Ureasechromosome CDS3261695 303 - 0.528053
NA Noc_2525 Glycine cleavage system transcriptional repressorchromosome CDS2874268 534 + 0.477528
NA Noc_1021 Tryptophan synthasechromosome CDS1131796 816 + 0.545343
NA Noc_3054 Histidine biosynthesis protein HisFchromosome CDS3447705 774 + 0.534884
NA Noc_0907 Glycine cleavage H-proteinchromosome CDS991689 393 + 0.486005
NA Noc_1344 extracellular solute-binding protein, family 5chromosome CDS1492417 1521 - 0.514793
NA Noc_2586 tRNA synthetase, class II (G, H, P and S)chromosome CDS2939264 1194 - 0.495812
NA Noc_1047 N-acetyl-gamma-glutamyl-phosphate reductasechromosome CDS1153766 1032 - 0.530039
NA Noc_0172 Phosphoserine aminotransferasechromosome CDS191189 1083 + 0.501385
NA Noc_0351 conserved hypothetical proteinchromosome CDS385355 309 - 0.475728
NA Noc_0383 hypothetical proteinchromosome CDS425253 387 - 0.51938
NA Noc_3022 Major facilitator superfamily MFS_1chromosome CDS3419251 1419 + 0.546159
NA Noc_1647 Serine O-acetyltransferasechromosome CDS1842528 777 + 0.472329
NA Noc_1437 4-hydroxyphenylpyruvate dioxygenasechromosome CDS1593919 1056 + 0.495265
NA Noc_0208 Oligopeptidase Achromosome CDS230782 2040 + 0.523529
NA Noc_0725 hypothetical proteinchromosome CDS785208 1227 + 0.525672
NA Noc_0252 Shikimate kinasechromosome CDS278467 573 + 0.458988
NA Noc_2957 Ferredoxin-dependent glutamate synthasechromosome CDS3342561 1533 - 0.534899
NA Noc_2703 Homoserine O-succinyltransferasechromosome CDS3061949 1077 + 0.508821
NA Noc_2884 Urea transporterchromosome CDS3262983 1116 - 0.474014