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2024-05-03 19:50:55

Gene list

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COG category: Amino acid transport and metabolism
Organism: Thiomicrospira crunogena XCL-2, XCL-2

Number of genes found: 170

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Thiomicrospira crunogena XCL-2, XCL-2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Tcr_2180 PAS/PAC sensor hybrid histidine kinasechromosome CDS2400551 4233 + 0.44035
NA Tcr_1187 conserved hypothetical proteinchromosome CDS1298931 738 + 0.428184
NA Tcr_2026 amino acid carrier proteinchromosome CDS2237213 1302 + 0.506144
NA Tcr_2137 Shikimate kinasechromosome CDS2358684 525 - 0.434286
NA Tcr_1736 hypothetical proteinchromosome CDS1896149 1350 - 0.404444
NA Tcr_0172 5-methyltetrahydrofolate--homocysteinemethyltran sferasechromosome CDS203068 3720 - 0.478495
NA Tcr_1542 Aminotransferase, class I and IIchromosome CDS1681174 1188 - 0.421717
NA Tcr_1920 diguanylate cyclase (GGDEF domain) with PAS/PAC sensorchromosome CDS2101307 2682 - 0.423192
NA Tcr_0953 putative D-cysteine desulfhydrase, DcyDchromosome CDS1030244 945 - 0.449735
NA Tcr_0591 histidinol-phosphate aminotransferasechromosome CDS668339 1071 - 0.454715
NA Tcr_1195 Prephenate dehydrogenasechromosome CDS1308273 861 + 0.436702
NA Tcr_0533 acetylornithine and succinylornithine aminotransferaseschromosome CDS596350 1185 - 0.451477
NA Tcr_0787 hypothetical proteinchromosome CDS861649 546 + 0.382784
NA Tcr_1339 nitrogen regulatory protein P-II (GlnB, GlnK)chromosome CDS1454716 339 + 0.377581
NA Tcr_2032 Thiamine pyrophosphate enzymechromosome CDS2242411 1677 + 0.483005
NA Tcr_1589 aspartate kinasechromosome CDS1738187 1227 - 0.422983
NA Tcr_0598 Amino-acid N-acetyltransferase, ArgAchromosome CDS674694 1362 - 0.420705
NA Tcr_0675 hypothetical proteinchromosome CDS752282 270 + 0.374074
NA Tcr_0627 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-bindingchromosome CDS703655 1230 - 0.441463
NA Tcr_1413 Gamma-glutamyltransferasechromosome CDS1525759 1596 - 0.435464
NA Tcr_2108 amino acid permease-associated regionchromosome CDS2331122 1338 - 0.442451
NA Tcr_1969 imidazoleglycerol phosphate synthase, cyclase subunitchromosome CDS2166296 774 + 0.481912
NA Tcr_1847 diaminopimelate decarboxylasechromosome CDS2022230 1257 + 0.462212
NA Tcr_0802 Phosphoribosylanthranilate isomerasechromosome CDS874407 639 + 0.467919
NA Tcr_1055 hypothetical proteinchromosome CDS1130841 240 - 0.429167
NA Tcr_0590 arginine biosynthesis bifunctional protein ArgJchromosome CDS667063 1209 + 0.470637
NA Tcr_2091 hypothetical proteinchromosome CDS2308185 873 + 0.431844
NA Tcr_1559 Peptidase M24chromosome CDS1707957 1332 - 0.474474
NA Tcr_1303 extracellular solute-binding protein, family 5chromosome CDS1420210 1515 - 0.467327
NA Tcr_2100 conserved hypothetical proteinchromosome CDS2324096 351 - 0.34188
NA Tcr_1193 Chorismate mutasechromosome CDS1305993 1101 + 0.422343
NA Tcr_1604 Protein of unknown function DUF6, transmembranechromosome CDS1755102 909 + 0.422442
NA Tcr_1636 Aminotransferase, class IVchromosome CDS1789847 876 + 0.429224
NA Tcr_0272 S-adenosylmethionine decarboxylase relatedchromosome CDS320157 504 + 0.464286
NA Tcr_1078 hypothetical proteinchromosome CDS1156459 546 - 0.401099
NA Tcr_0635 acetolactate synthase, small subunitchromosome CDS711781 492 + 0.463415
NA Tcr_0094 Major facilitator superfamily MFS_1chromosome CDS120872 1260 + 0.472222
NA Tcr_1937 diguanylate cyclase (GGDEF domain)chromosome CDS2123210 2328 - 0.409794
NA Tcr_1620 phosphoserine phosphatase SerBchromosome CDS1773886 828 + 0.440821
NA Tcr_0616 serine O-acetyltransferasechromosome CDS692046 783 + 0.472542
NA Tcr_0217 Phosphoribosyl-AMP cyclohydrolasechromosome CDS257046 444 - 0.443694
NA Tcr_1537 Major facilitator superfamily MFS_1chromosome CDS1676631 1158 - 0.435233
NA Tcr_1298 Binding-protein-dependent transport systems inner membrane componentchromosome CDS1416466 819 - 0.489621
NA Tcr_0988 ATP phosphoribosyltransferasechromosome CDS1064259 627 + 0.416268
NA Tcr_0482 gamma-glutamyl phosphate reductasechromosome CDS540056 1290 + 0.472093
NA Tcr_0147 FAD dependent oxidoreductasechromosome CDS178322 1053 - 0.501424
NA Tcr_0266 anthranilate synthase component Ichromosome CDS314263 1506 + 0.4834
NA Tcr_0100 hypothetical proteinchromosome CDS127847 1506 + 0.439575
NA Tcr_0153 shikimate 5-dehydrogenasechromosome CDS185480 834 - 0.486811
NA Tcr_2136 3-dehydroquinate synthasechromosome CDS2357597 1077 - 0.444754
NA Tcr_1903 Aminotransferase, class I and IIchromosome CDS2083556 1191 + 0.458438
NA Tcr_1288 Glyoxalase/bleomycin resistance protein/dioxygenasechromosome CDS1404916 372 - 0.430108
NA Tcr_0534 branched-chain amino acid aminotransferasechromosome CDS597790 927 + 0.449838
NA Tcr_1751 Peptidase M14, carboxypeptidase Achromosome CDS1911879 915 + 0.442623
NA Tcr_1958 glutamate synthase, small subunitchromosome CDS2153722 1413 + 0.459306
NA Tcr_1196 3-phosphoshikimate 1-carboxyvinyltransferasechromosome CDS1309175 1338 + 0.473094
NA Tcr_1349 Aminomethyltransferasechromosome CDS1463503 2886 - 0.450104
NA Tcr_0636 ketol-acid reductoisomerasechromosome CDS712324 1017 + 0.447394
NA Tcr_0582 cysteine desulfurases, SufS subfamilychromosome CDS656691 1215 + 0.43786
NA Tcr_1850 glycine cleavage system H proteinchromosome CDS2026041 390 - 0.451282
NA Tcr_0914 argininosuccinate synthasechromosome CDS990956 1209 + 0.436725
NA Tcr_1839 homoserine O-acetyltransferasechromosome CDS2014035 1158 + 0.455095
NA Tcr_0110 argininosuccinate lyasechromosome CDS140314 1389 - 0.449964
NA Tcr_1563 threonine dehydratase, biosyntheticchromosome CDS1711435 1524 - 0.467192
NA Tcr_0276 conserved hypothetical proteinchromosome CDS323287 1062 - 0.451036
NA Tcr_1970 Phosphoribosyl-ATP pyrophosphohydrolasechromosome CDS2167066 342 + 0.391813
NA Tcr_1866 Major facilitator superfamily MFS_1chromosome CDS2042852 1197 - 0.507937
NA Tcr_0392 ribose-phosphate pyrophosphokinasechromosome CDS443126 966 + 0.488613
NA Tcr_1184 Binding-protein-dependent transport systems inner membrane componentchromosome CDS1293272 1374 + 0.434498
NA Tcr_0831 putative membrane proteinchromosome CDS903867 336 + 0.392857
NA Tcr_0809 O-succinylhomoserine sulfhydrylasechromosome CDS881474 1194 + 0.460637
NA Tcr_1161 Glycosyl transferase, family 3chromosome CDS1264996 984 + 0.444106
NA Tcr_1957 Glutamate synthase (ferredoxin)chromosome CDS2149228 4482 + 0.464302
NA Tcr_0221 Peptidase M24chromosome CDS261521 1245 + 0.488353
NA Tcr_0611 2-isopropylmalate synthasechromosome CDS687654 1545 + 0.472492
NA Tcr_0405 diaminopimelate epimerasechromosome CDS456328 852 + 0.485915
NA Tcr_1760 conserved hypothetical proteinchromosome CDS1921090 663 + 0.429864
NA Tcr_1251 Homoserine dehydrogenasechromosome CDS1366888 1317 - 0.457099
NA Tcr_0521 amino acid-binding ACTchromosome CDS583797 1446 + 0.426694
NA Tcr_0348 N-acetyl-gamma-glutamyl-phosphate reductasechromosome CDS396637 1065 + 0.4723
NA Tcr_0356 Histidinol-phosphate phosphatasechromosome CDS405566 537 + 0.478585
NA Tcr_1344 Ferredoxin-dependent glutamate synthasechromosome CDS1458716 1326 - 0.49095
NA Tcr_1499 nitrogen regulatory protein P-II (GlnB, GlnK)chromosome CDS1624673 339 + 0.412979
NA Tcr_1459 hypothetical proteinchromosome CDS1577760 1176 - 0.411565
NA Tcr_1182 extracellular solute-binding protein, family 5chromosome CDS1290166 2130 + 0.424413
NA Tcr_1393 phospho-2-dehydro-3-deoxyheptonate aldolasechromosome CDS1505114 1113 + 0.449236
NA Tcr_0274 Ornithine decarboxylasechromosome CDS321564 1197 + 0.467001
NA Tcr_0876 Drug resistance transporter Bcr/CflA subfamilychromosome CDS954685 1218 + 0.450739
NA Tcr_1989 tryptophan synthase, beta subunitchromosome CDS2187561 1203 + 0.481297
NA Tcr_0326 Major facilitator superfamily MFS_1chromosome CDS366112 1389 + 0.467243
NA Tcr_1837 pyrroline-5-carboxylate reductasechromosome CDS2012507 858 + 0.475524
NA Tcr_1878 Pyruvate carboxyltransferasechromosome CDS2053633 1620 + 0.500617
NA Tcr_0800 Aspartate-semialdehyde dehydrogenase, USG-1 relatedchromosome CDS872576 1023 + 0.42522
NA Tcr_0051 Thiamine pyrophosphate enzymechromosome CDS62546 1644 + 0.434307
NA Tcr_1183 Binding-protein-dependent transport systems inner membrane componentchromosome CDS1292295 978 + 0.443763
NA Tcr_1966 Imidazoleglycerol-phosphate dehydratasechromosome CDS2164297 588 + 0.479592
NA Tcr_0716 Aminotransferase, class IVchromosome CDS785155 888 + 0.440315
NA Tcr_0268 anthranilate phosphoribosyltransferasechromosome CDS316402 1023 + 0.478006
NA Tcr_0269 Indole-3-glycerol-phosphate synthasechromosome CDS317515 807 + 0.447336
NA Tcr_0536 glutamine synthetase, type Ichromosome CDS599101 1407 - 0.445629
NA Tcr_1194 histidinol-phosphate aminotransferasechromosome CDS1307124 1122 + 0.423351
NA Tcr_1346 Glutamine amidotransferase, class-IIchromosome CDS1460783 900 - 0.462222
NA Tcr_2184 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferasechromosome CDS2407025 2349 - 0.479779
NA Tcr_0220 2,4-diaminobutyrate 4-transaminasechromosome CDS260265 1260 + 0.496825
NA Tcr_1536 Glyoxalase Ichromosome CDS1675970 396 - 0.444444
NA Tcr_0067 Oligopeptidase Achromosome CDS82559 2052 + 0.445906
NA Tcr_1351 FAD dependent oxidoreductasechromosome CDS1466657 1242 - 0.462963
NA Tcr_1538 chorismate synthasechromosome CDS1677885 1101 - 0.470481
NA Tcr_0879 carbamoyl-phosphate synthase, large subunitchromosome CDS957675 3213 + 0.45347
NA Tcr_1008 conserved hypothetical proteinchromosome CDS1087557 678 + 0.477876
NA Tcr_1192 phosphoserine aminotransferasechromosome CDS1304884 1065 + 0.430986
NA Tcr_0267 glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthasechromosome CDS315789 594 + 0.446128
NA Tcr_1402 Glycine hydroxymethyltransferasechromosome CDS1514412 1272 - 0.455975
NA Tcr_0912 nitrogen regulatory protein P-II (GlnB, GlnK)chromosome CDS989370 339 - 0.412979
NA Tcr_0634 acetolactate synthase, large subunit, biosynthetic typechromosome CDS710066 1704 + 0.457746
NA Tcr_1798 Glutamate--ammonia ligasechromosome CDS1973652 1356 - 0.454277
NA Tcr_1066 Amino acid permease-associated regionchromosome CDS1142948 1278 - 0.470266
NA Tcr_1552 dihydrodipicolinate synthasechromosome CDS1700324 861 - 0.463415
NA Tcr_1801 Protein of unknown function DUF6, transmembranechromosome CDS1977102 855 - 0.476023
NA Tcr_0989 histidinol dehydrogenasechromosome CDS1064981 1302 + 0.455453
NA Tcr_0796 3-isopropylmalate dehydratase, small subunitchromosome CDS869363 645 + 0.448062
NA Tcr_0445 3-dehydroquinate dehydratase, type IIchromosome CDS497770 435 - 0.45977
NA Tcr_0532 ornithine carbamoyltransferasechromosome CDS595409 909 - 0.444444
NA Tcr_1836 Glu/Leu/Phe/Val dehydrogenasechromosome CDS2011102 1275 + 0.46902
NA Tcr_1498 conserved hypothetical proteinchromosome CDS1623706 789 - 0.424588
NA Tcr_1715 Gamma-glutamyltransferasechromosome CDS1875172 1731 - 0.477181
NA Tcr_1291 succinyl-diaminopimelate desuccinylasechromosome CDS1406657 1137 + 0.459103
NA Tcr_0878 carbamoyl-phosphate synthase, small subunitchromosome CDS956521 1137 + 0.44591
NA Tcr_0804 tryptophan synthase, alpha subunitchromosome CDS876294 819 + 0.444444
NA Tcr_1886 hypothetical proteinchromosome CDS2062669 783 - 0.44189
NA Tcr_0907 hypothetical proteinchromosome CDS985517 684 + 0.431287
NA Tcr_1748 Leucyl aminopeptidasechromosome CDS1908750 1482 + 0.475034
NA Tcr_1485 neutral zinc metallopeptidases, zinc-binding sitechromosome CDS1603766 2655 - 0.403013
NA Tcr_0872 dihydrodipicolinate reductasechromosome CDS952439 801 + 0.456929
NA Tcr_0599 dihydroxy-acid dehydratasechromosome CDS676081 1854 + 0.463323
NA Tcr_1742 Protein of unknown function DUF160chromosome CDS1901612 972 + 0.467078
NA Tcr_1236 Protein of unknown function DUF6, transmembranechromosome CDS1351411 906 + 0.443709
NA Tcr_0999 HAD-superfamily subfamily IB, PSPase-likechromosome CDS1076092 657 - 0.47032
NA Tcr_1299 Binding-protein-dependent transport systems inner membrane componentchromosome CDS1417295 924 - 0.472944
NA Tcr_1249 threonine synthasechromosome CDS1364201 1476 - 0.420054
NA Tcr_1068 Protein of unknown function DUF6, transmembranechromosome CDS1145732 936 - 0.470085
NA Tcr_1347 Glutamate--ammonia ligasechromosome CDS1461694 1335 - 0.440449
NA Tcr_0451 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-bindingchromosome CDS505104 1128 - 0.437057
NA Tcr_1235 asparaginasechromosome CDS1350820 510 + 0.447059
NA Tcr_0797 3-isopropylmalate dehydrogenasechromosome CDS870036 1074 + 0.459032
NA Tcr_1908 Amino acid permease-associated regionchromosome CDS2088578 1323 + 0.475435
NA Tcr_0519 2,4-diaminobutyrate 4-transaminasechromosome CDS582022 1257 + 0.422434
NA Tcr_0344 glutamate 5-kinasechromosome CDS392349 1131 + 0.490716
NA Tcr_1252 Aminotransferase, class I and IIchromosome CDS1368219 1191 - 0.447523
NA Tcr_0273 spermidine synthasechromosome CDS320683 831 + 0.462094
NA Tcr_0803 tryptophan synthase, beta subunitchromosome CDS875087 1206 + 0.465174
NA Tcr_1822 5,10-methylenetetrahydrofolate reductasechromosome CDS1998651 858 + 0.475524
NA Tcr_1093 ATP phosphoribosyltransferase regulatory subunitchromosome CDS1175292 1170 + 0.442735
NA Tcr_0595 Asparagine synthase, glutamine-hydrolyzingchromosome CDS671731 1809 + 0.450525
NA Tcr_1345 Glutamate synthase, alpha subunit-likechromosome CDS1460076 684 - 0.464912
NA Tcr_0130 conserved hypothetical proteinchromosome CDS163610 2025 + 0.501728
NA Tcr_1289 2,3,4,5-tetrahydropyridine-2,6-dicarboxylateN-su ccinyltransferasechromosome CDS1405373 828 + 0.455314
NA Tcr_0023 Lysine exporter protein (LYSE/YGGA)chromosome CDS26891 630 + 0.453968
NA Tcr_1022 selenide, water dikinasechromosome CDS1100255 1080 + 0.500926
NA Tcr_1899 acetylglutamate kinasechromosome CDS2079658 915 - 0.436066
NA Tcr_1350 sarcosine oxidase subunit Dchromosome CDS1466378 270 - 0.418519
NA Tcr_0549 Arylesterasechromosome CDS613815 660 - 0.474242
NA Tcr_1306 cysteine synthase Bchromosome CDS1423704 909 - 0.49615
NA Tcr_1968 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerasechromosome CDS2165546 741 + 0.469636
NA Tcr_0795 3-isopropylmalate dehydratase, large subunitchromosome CDS867936 1425 + 0.492632
NA Tcr_0715 Anthranilate synthasechromosome CDS783801 1362 + 0.425844
NA Tcr_1755 Aminotransferase, class I and IIchromosome CDS1917273 1185 + 0.474262
NA Tcr_0069 Major facilitator superfamily MFS_1chromosome CDS86025 1290 + 0.422481
NA Tcr_0022 conserved hypothetical proteinchromosome CDS26485 399 + 0.393484
NA Tcr_1967 imidazole glycerol phosphate synthase, glutamine amidotransferase subunitchromosome CDS2164888 642 + 0.448598