Gene list
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COG category: Amino acid transport and metabolism
Organism: Shigella flexneri 2a str. 2457T, 2457T
Number of genes found: 373
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Shigella flexneri 2a str. 2457T, 2457T | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | S3122 | putative oxidoreductase | chromosome | CDS | 3005496 | 990 | - | 0.523232 |
NA | S1384 | putative glutamine synthetase | chromosome | CDS | 1353627 | 1419 | - | 0.532065 |
NA | S4827 | hypothetical protein | chromosome | CDS | 3679197 | 1146 | - | 0.397906 |
NA | S1424 | putative transport periplasmic protein | chromosome | CDS | 1392226 | 1635 | + | 0.477676 |
NA | S1513 | putative transport protein | chromosome | CDS | 1474798 | 1485 | - | 0.513131 |
NA | S2501 | putative aminotransferase | chromosome | CDS | 2395130 | 1218 | + | 0.504105 |
NA | S2567 | sucrose-6 phosphate hydrolase | chromosome | CDS | 2364743 | 336 | + | 0.532738 |
NA | S2535 | putative peptidase | chromosome | CDS | 2429284 | 2067 | + | 0.521529 |
NA | S1915 | hypothetical protein | chromosome | CDS | 1856431 | 342 | - | 0.461988 |
NA | S1596 | hypothetical protein | chromosome | CDS | 1553075 | 1032 | + | 0.562016 |
NA | S2648 | hypothetical protein | chromosome | CDS | 2535659 | 213 | + | 0.492958 |
NA | S2360 | putative oxidoreductase | chromosome | CDS | 2236278 | 1239 | + | 0.513317 |
NA | S2141 | hypothetical bacteriophage protein | chromosome | CDS | 2038773 | 480 | + | 0.54375 |
NA | S1906 | putative transport system permease protein | chromosome | CDS | 1849313 | 795 | - | 0.543396 |
NA | S0287 | putative Rhs-family protein | chromosome | CDS | 285407 | 408 | + | 0.541667 |
NA | S3053 | putative transporter protein | chromosome | CDS | 2941000 | 1119 | + | 0.436997 |
NA | S2641 | hypothetical protein | chromosome | CDS | 2529811 | 660 | - | 0.563636 |
NA | S2789 | putative tail fiber protein | chromosome | CDS | 2685470 | 987 | - | 0.511651 |
NA | S3019 | hypothetical protein | chromosome | CDS | 2898463 | 1206 | + | 0.556385 |
NA | S2583 | putative aminotransferase | chromosome | CDS | 2478246 | 1239 | - | 0.551251 |
NA | S1842 | hypothetical protein | chromosome | CDS | 1779175 | 1221 | - | 0.551188 |
NA | S0841 | putative DEOR-type transcriptional regulator | chromosome | CDS | 827704 | 1209 | - | 0.544251 |
NA | S2533 | putative transport protein | chromosome | CDS | 2426511 | 1179 | - | 0.569126 |
NA | S1852 | putative transport system permease protein | chromosome | CDS | 1791003 | 1146 | + | 0.446771 |
NA | S1563 | putative transport protein | chromosome | CDS | 1520895 | 1380 | + | 0.49058 |
NA | S2896 | hypothetical protein | chromosome | CDS | 2778150 | 738 | + | 0.5271 |
NA | S2577 | putative enzyme | chromosome | CDS | 2471457 | 1695 | - | 0.464897 |
NA | S1562 | putative oxidoreductase | chromosome | CDS | 1519792 | 1077 | + | 0.498607 |
NA | S3363 | putative L-serine deaminase | chromosome | CDS | 3240909 | 1365 | - | 0.534066 |
NA | S1751 | hypothetical protein | chromosome | CDS | 1686236 | 822 | + | 0.515815 |
NA | S1853 | putative amino acid/amine transport protein | chromosome | CDS | 1792442 | 1161 | + | 0.459087 |
NA | S1212 | hypothetical bacteriophage protein | chromosome | CDS | 1180340 | 303 | + | 0.508251 |
NA | S2655 | hypothetical protein | chromosome | CDS | 2541598 | 408 | - | 0.490196 |
NA | S0823 | putative transport protein | chromosome | CDS | 809732 | 1539 | + | 0.521118 |
NA | S2471 | putative transport/receptor protein | chromosome | CDS | 2364796 | 669 | + | 0.505232 |
NA | S4552 | transport of lysine/cadaverine | chromosome | CDS | 4456077 | 1053 | - | 0.489079 |
NA | S2649 | putative amino acid antiporter | chromosome | CDS | 2536123 | 1461 | + | 0.399042 |
NA | S4825 | hypothetical protein | chromosome | CDS | 3074404 | 285 | - | 0.470175 |
NA | S2894 | hypothetical protein | chromosome | CDS | 2776847 | 960 | + | 0.548958 |
NA | S2996 | putative transport protein | chromosome | CDS | 2874438 | 1353 | - | 0.522542 |
NA | S0255 | hypothetical protein | chromosome | CDS | 259881 | 345 | - | 0.443478 |
NA | S0824 | putative transport system permease protein | chromosome | CDS | 811288 | 921 | + | 0.533116 |
NA | S1874 | putative ATP-binding component of a transport system | chromosome | CDS | 1816087 | 987 | + | 0.541033 |
NA | S0500 | hypothetical protein | chromosome | CDS | 507702 | 252 | + | 0.47619 |
NA | S1758 | putative arginine/ornithine antiporter | chromosome | CDS | 1693832 | 1383 | + | 0.532176 |
NA | S0825 | putative transport system permease protein | chromosome | CDS | 812211 | 912 | + | 0.528509 |
NA | S1873 | putative transport protein | chromosome | CDS | 1815194 | 897 | + | 0.535117 |
NA | S1542 | putative repressor protein | chromosome | CDS | 1502389 | 567 | - | 0.412698 |
NA | S2654 | hypothetical protein | chromosome | CDS | 2541106 | 480 | - | 0.497917 |
adiA | S3624 | biodegradative arginine decarboxylase | chromosome | CDS | 3501868 | 2268 | - | 0.524691 |
ampG | S0384 | beta-lactamase induction signal transducer AmpG | chromosome | CDS | 386970 | 1476 | - | 0.542683 |
ansA | S1571 | cytoplasmic L-asparaginase I | chromosome | CDS | 1529251 | 1017 | - | 0.508358 |
ansB | S3157 | periplasmic L-asparaginase II | chromosome | CDS | 3033957 | 1047 | - | 0.52531 |
araE | S3049 | low-affinity L-arabinose transport system proton symport protein | chromosome | CDS | 2935806 | 1419 | - | 0.512333 |
arcC | S0460 | putative carbamate kinase | chromosome | CDS | 468821 | 894 | + | 0.571588 |
argA | S3026 | N-acetylglutamate synthase; amino acid acetyltransferase | chromosome | CDS | 2904258 | 1332 | + | 0.527027 |
argB | S3710 | acetylglutamate kinase | chromosome | CDS | 3601673 | 774 | - | 0.550388 |
argC | S3711 | N-acetyl-gamma-glutamylphosphate reductase | chromosome | CDS | 3602457 | 1005 | - | 0.534328 |
argD | S4385 | acetylornithine delta-aminotransferase | chromosome | CDS | 4313314 | 1221 | + | 0.543817 |
argE | S3712 | acetylornithine deacetylase | chromosome | CDS | 3603615 | 1152 | + | 0.513889 |
argG | S3430 | argininosuccinate synthetase | chromosome | CDS | 3301936 | 1344 | + | 0.523065 |
argH | S3709 | argininosuccinate lyase | chromosome | CDS | 3600239 | 1374 | - | 0.560408 |
argI | S4496 | ornithine carbamoyltransferase 1 | chromosome | CDS | 4401353 | 1014 | + | 0.504931 |
argT | S2521 | lysine-, arginine-, ornithine-binding periplasmic protein | chromosome | CDS | 2414578 | 783 | - | 0.498084 |
aroA | S0967 | 5-enolpyruvylshikimate-3-phosphate synthetase | chromosome | CDS | 945133 | 1284 | + | 0.507788 |
aroB | S4355 | 3-dehydroquinate synthase | chromosome | CDS | 4285004 | 1089 | + | 0.543618 |
aroC | S2540 | chorismate synthase | chromosome | CDS | 2433968 | 1086 | - | 0.566298 |
aroD | S1855 | 3-dehydroquinate dehydratase | chromosome | CDS | 1794511 | 759 | + | 0.509881 |
aroE | S3537 | dehydroshikimate reductase | chromosome | CDS | 3402985 | 819 | - | 0.492063 |
aroF | S2838 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tyrosine repressible) | chromosome | CDS | 2733365 | 1071 | - | 0.512605 |
aroG | S0558 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, phenylalanine repressible) | chromosome | CDS | 567381 | 1053 | - | 0.512821 |
aroH | S1644 | 3-deoxy-D-arabinoheptulosonate-7-phosphatesyntha se | chromosome | CDS | 1595903 | 1047 | - | 0.529131 |
aroK | S4354 | shikimate kinase I | chromosome | CDS | 4284225 | 723 | + | 0.485477 |
aroL | S0332 | shikimate kinase II | chromosome | CDS | 334782 | 525 | + | 0.52 |
aroP | S0111 | aromatic amino acid transport protein | chromosome | CDS | 117929 | 1374 | - | 0.526929 |
artI | S0859 | arginine 3rd transport system periplasmic binding protein | chromosome | CDS | 843808 | 732 | - | 0.489071 |
artJ | S0856 | arginine 3rd transport system periplasmic binding protein | chromosome | CDS | 841394 | 732 | - | 0.456284 |
artM | S0857 | arginine 3rd transport system permease protein | chromosome | CDS | 842417 | 669 | - | 0.527653 |
artP | S0860 | ATP-binding component of 3rd arginine transport system | chromosome | CDS | 844557 | 729 | - | 0.526749 |
artQ | S0858 | arginine 3rd transport system permease protein | chromosome | CDS | 843085 | 717 | - | 0.542538 |
asd | S4307 | aspartate-semialdehyde dehydrogenase | chromosome | CDS | 4225138 | 1104 | + | 0.540761 |
asnA | S3944 | asparagine synthetase A | chromosome | CDS | 3837879 | 993 | - | 0.564955 |
asnB | S0630 | asparagine synthetase B | chromosome | CDS | 648776 | 1665 | + | 0.515916 |
aspA | S4560 | aspartate ammonia-lyase (aspartase) | chromosome | CDS | 4462704 | 1482 | - | 0.489204 |
aspC | S0989 | aspartate aminotransferase | chromosome | CDS | 973712 | 1191 | - | 0.518052 |
avtA | S4153 | alanine-alpha-ketoisovalerate/valine-pyruvate transaminase C | chromosome | CDS | 4052685 | 1254 | - | 0.523923 |
bcr | S2398 | bicyclomycin resistance protein; transmembrane protein | chromosome | CDS | 2281226 | 1191 | - | 0.530647 |
brnQ | S0346 | branched-chain amino-acid transport system II carrier protein | chromosome | CDS | 348233 | 1320 | + | 0.555303 |
carA | S0031 | carbamoyl-phosphate synthetase, glutamine (small) subunit | chromosome | CDS | 28567 | 1149 | + | 0.534378 |
carB | S0032 | carbamoyl-phosphate synthase large subunit | chromosome | CDS | 29733 | 3222 | + | 0.557107 |
cmr | S0838 | chloramphenicol resistance pump Cmr | chromosome | CDS | 825252 | 1227 | + | 0.521597 |
cycA | S4543 | transport protein for D-alanine, D-serine, and glycine | chromosome | CDS | 4448896 | 1413 | - | 0.527955 |
cysD | S2968 | ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 2 | chromosome | CDS | 2842262 | 909 | - | 0.537954 |
cysE | S4122 | serine acetyltransferase | chromosome | CDS | 4020059 | 822 | + | 0.53163 |
cysH | S2971 | 3-phosphoadenosine 5-phosphosulfate reductase | chromosome | CDS | 2846306 | 735 | - | 0.514286 |
cysK | S2615 | cysteine synthase A, O-acetylserine sulfhydrolase A | chromosome | CDS | 2507843 | 972 | + | 0.501029 |
cysM | S2622 | cysteine synthase B, O-acetylserine sulfhydrolase B | chromosome | CDS | 2514109 | 912 | - | 0.559211 |
cysZ | S2614 | sulfate transport protein | chromosome | CDS | 2506897 | 762 | + | 0.498688 |
dadA | S1266 | D-amino acid dehydrogenase subunit | chromosome | CDS | 1224163 | 1299 | + | 0.555812 |
dapA | S2671 | dihydrodipicolinate synthase | chromosome | CDS | 2565073 | 879 | - | 0.516496 |
dapB | S0030 | dihydrodipicolinate reductase | chromosome | CDS | 27290 | 822 | + | 0.530414 |
dapD | S0159 | 2,3,4,5-tetrahydropyridine-2-carboxylateN-succin yltransferase | chromosome | CDS | 175554 | 825 | - | 0.528485 |
dapE | S2665 | N-succinyl-diaminopimelate deacylase | chromosome | CDS | 2557798 | 1128 | + | 0.531028 |
dapF | S3869 | diaminopimelate epimerase | chromosome | CDS | 3766019 | 828 | - | 0.550725 |
dcp | S1682 | dipeptidyl carboxypeptidase II | chromosome | CDS | 1628062 | 2046 | + | 0.5 |
dgoT | S3998 | D-galactonate transport protein | chromosome | CDS | 3892275 | 1338 | - | 0.530643 |
dppA | S4191 | dipeptide transport protein | chromosome | CDS | 4096282 | 1608 | + | 0.518657 |
dppB | S4192 | dipeptide transport system permease protein 1 | chromosome | CDS | 4098197 | 1020 | + | 0.561765 |
dppC | S4193 | dipeptide transport system permease protein 2 | chromosome | CDS | 4099226 | 903 | + | 0.589147 |
dppD | S4194 | putative ATP-binding component of dipeptide transport system | chromosome | CDS | 4100139 | 984 | + | 0.558943 |
dppF | S4195 | putative ATP-binding component of dipeptide transport system | chromosome | CDS | 4101119 | 1005 | + | 0.558209 |
dsdA | S2570 | D-serine dehydratase (deaminase) | chromosome | CDS | 2460404 | 1329 | + | 0.505643 |
edd | S1927 | 6-phosphogluconate dehydratase | chromosome | CDS | 1865860 | 1812 | - | 0.535872 |
emrB | S2900 | multidrug resistant protein emrB | chromosome | CDS | 2781149 | 1539 | + | 0.560754 |
emrD | S3980 | multidrug resistance protein D | chromosome | CDS | 3875818 | 1152 | + | 0.574653 |
emrY | S2571 | multidrug resistance protein Y | chromosome | CDS | 2461840 | 1539 | - | 0.417804 |
exuT | S3340 | transport protein of hexuronates | chromosome | CDS | 3224314 | 1299 | + | 0.543495 |
flhE | S2012 | flagellar protein | chromosome | CDS | 1934087 | 339 | - | 0.557522 |
fsr | S0431 | fosmidomycin resistance protein | chromosome | CDS | 439698 | 1221 | - | 0.523342 |
gabP | S2875 | transport permease protein of gamma-aminobutyrate | chromosome | CDS | 2761448 | 1401 | + | 0.512491 |
gabT | S2874 | GABA transaminase | chromosome | CDS | 2760083 | 1128 | + | 0.591312 |
gadA | S4173 | glutamate decarboxylase isozyme | chromosome | CDS | 4078290 | 1401 | - | 0.538901 |
gadB | S1867 | glutamate decarboxylase isozyme | chromosome | CDS | 1807985 | 1401 | + | 0.538901 |
galP | S3138 | galactose:proton symporter, MFS family | chromosome | CDS | 3018815 | 1356 | + | 0.533186 |
gatD | S2277 | galactitol-1-phosphate dehydrogenase | chromosome | CDS | 2159598 | 1041 | - | 0.483189 |
gcvH | S3089 | carrier of aminomethyl moiety via covalently bound lipoyl cofactor in glycine cleavage complex | chromosome | CDS | 2975163 | 390 | - | 0.523077 |
gcvP | S3088 | glycine decarboxylase, P protein of glycine cleavage system | chromosome | CDS | 2972171 | 2874 | - | 0.559847 |
gcvT | S3090 | aminomethyltransferase (T protein; tetrahydrofolate-dependent) of glycine cleavage system | chromosome | CDS | 2975576 | 1095 | - | 0.542466 |
ggt | S4298 | gamma-glutamyltranspeptidase | chromosome | CDS | 4216590 | 1743 | + | 0.550775 |
glnA | S3806 | glutamine synthetase | chromosome | CDS | 3702610 | 1410 | + | 0.528369 |
glnB | S2772 | regulatory protein P-II for glutamine synthetase | chromosome | CDS | 2665528 | 339 | - | 0.510324 |
glnH | S0804 | periplasmic glutamine-binding protein; permease | chromosome | CDS | 787477 | 747 | - | 0.485944 |
glnK | S0401 | nitrogen regulatory protein P-II 2 | chromosome | CDS | 407492 | 339 | + | 0.510324 |
glnP | S0803 | glutamine transport protein GlnP | chromosome | CDS | 786679 | 660 | - | 0.536364 |
glnQ | S0802 | ATP-binding component of glutamine high-affinity transport system | chromosome | CDS | 785960 | 723 | - | 0.543568 |
gloA | S1810 | lactoylglutathione lyase | chromosome | CDS | 1745529 | 408 | + | 0.512255 |
glpB | S2457 | sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit | chromosome | CDS | 2350476 | 1260 | + | 0.557936 |
gltB | S3470 | glutamate synthase, large subunit | chromosome | CDS | 3337901 | 4569 | + | 0.57146 |
gltD | S3471 | glutamate synthase, small subunit | chromosome | CDS | 3342482 | 1419 | + | 0.551092 |
gltJ | S0649 | glutamate/aspartate transport system permease | chromosome | CDS | 660083 | 741 | + | 0.530364 |
gltK | S0650 | glutamate/aspartate transport system permease | chromosome | CDS | 660823 | 675 | + | 0.502222 |
gltL | S0651 | ATP-binding protein of glutamate/aspartate transport system | chromosome | CDS | 661497 | 726 | + | 0.523416 |
gltS | S4076 | glutamate transport protein | chromosome | CDS | 3976411 | 1206 | + | 0.538972 |
glyA | S2770 | serine hydroxymethyltransferase | chromosome | CDS | 2662713 | 1254 | - | 0.5311 |
gntP | S4455 | gluconate transport system permease 3 | chromosome | CDS | 4364235 | 1344 | + | 0.529018 |
gntT | S4327 | high-affinity transport permease for gluconate | chromosome | CDS | 4253505 | 1317 | - | 0.537585 |
gntU | S4304 | low-affinity gluconate transport permease protein | chromosome | CDS | 4223019 | 1278 | + | 0.558685 |
goaG | S1389 | 4-aminobutyrate aminotransferase | chromosome | CDS | 1359562 | 1266 | + | 0.57188 |
gsp | S3236 | glutathionylspermidine synthetase/amidase | chromosome | CDS | 3120643 | 1860 | - | 0.522581 |
hcaT | S2755 | MFS (major facilitator superfamily) transporter | chromosome | CDS | 2645147 | 1140 | - | 0.564035 |
hisA | S2207 | N-(5-phospho-L-ribosyl-formimino)-5-amino-1-(5- phosphoribosyl)-4-imidazolecarboxamide isomerase | chromosome | CDS | 2084376 | 738 | + | 0.562331 |
hisB | S2205 | imidazole glycerol phosphate dehydratase and histidinol-phosphate phosphatase | chromosome | CDS | 2082719 | 1068 | + | 0.531835 |
hisC | S2204 | histidinol-phosphate aminotransferase | chromosome | CDS | 2081649 | 1071 | + | 0.548086 |
hisD | S2203 | oxidoreductase for L-histidinal:NAD+ and L-histidinol:NAD+ | chromosome | CDS | 2080348 | 1305 | + | 0.577778 |
hisF | S2208 | imidazole glycerol phosphate synthase subunit in heterodimer with HisH, imidazole glycerol phsphate synthase holoenzyme | chromosome | CDS | 2085095 | 777 | + | 0.519949 |
hisG | S2202 | ATP phosphoribosyltransferase | chromosome | CDS | 2079443 | 900 | + | 0.545556 |
hisH | S2206 | glutamine amidotransferase subunit of heterodimer with HisF, imidazole glycerol phosphate synthase holoenzyme | chromosome | CDS | 2083786 | 591 | + | 0.556684 |
hisI | S2209 | phosphoribosyl-amp cyclohydrolase; phosphoribosyl-ATP pyrophosphatase | chromosome | CDS | 2085865 | 612 | + | 0.521242 |
hisJ | S2520 | histidine-binding periplasmic protein of high-affinity histidine transport system | chromosome | CDS | 2413575 | 783 | - | 0.49553 |
hisM | S2518 | histidine transport, membrane protein M | chromosome | CDS | 2412086 | 717 | - | 0.500697 |
hisP | S2517 | ATP-binding component of histidine transport | chromosome | CDS | 2411305 | 774 | - | 0.516796 |
hisQ | S2519 | histidine transport system permease protein | chromosome | CDS | 2412799 | 687 | - | 0.534207 |
hpaF | S4651 | 5-carboxymethyl-2-hydroxymuconatedelta-isomerase | chromosome | CDS | 4545266 | 381 | - | 0.496063 |
hpaX | S4648 | putative 4-hydroxyphenylacetate permease | chromosome | CDS | 4542204 | 1356 | - | 0.463864 |
ilvA | S3912 | threonine deaminase (dehydratase) | chromosome | CDS | 3806976 | 1545 | - | 0.586408 |
ilvB | S3978 | acetolactate synthase I, valine-sensitive, large subunit | chromosome | CDS | 3872959 | 1689 | - | 0.560687 |
ilvC | S3910 | ketol-acid reductoisomerase | chromosome | CDS | 3804464 | 1476 | - | 0.53523 |
ilvD | S3913 | dihydroxyacid dehydratase | chromosome | CDS | 3808523 | 1851 | - | 0.56456 |
ilvE | S3914 | branched-chain amino-acid aminotransferase | chromosome | CDS | 3810438 | 930 | - | 0.544086 |
ilvG | S3917 | acetolactate synthase II, large subunit | chromosome | CDS | 3811647 | 1647 | - | 0.545841 |
ilvH | S0075 | acetolactate synthase III, small subunit | chromosome | CDS | 84684 | 492 | + | 0.502033 |
ilvI | S0074 | acetolactate synthase III, large subunit | chromosome | CDS | 82873 | 1809 | + | 0.524599 |
ilvN | S3977 | acetolactate synthase I, valine sensitive, small subunit | chromosome | CDS | 3872665 | 291 | - | 0.484536 |
imm | S4057 | putative membrane transport protein | chromosome | CDS | 3954544 | 1194 | + | 0.569514 |
kgtP | S2822 | alpha-ketoglutarate permease | chromosome | CDS | 2714933 | 1299 | - | 0.487298 |
ldcC | S0179 | lysine decarboxylase 2 | chromosome | CDS | 200110 | 2142 | + | 0.507937 |
leuA | S0071 | 2-isopropylmalate synthase | chromosome | CDS | 79286 | 1572 | - | 0.527354 |
leuB | S0070 | 3-isopropylmalate dehydrogenase | chromosome | CDS | 78195 | 1095 | - | 0.552511 |
leuC | S0069 | 3-isopropylmalate isomerase (dehydratase) subunit | chromosome | CDS | 76792 | 1401 | - | 0.553176 |
leuD | S0068 | isopropylmalate isomerase subunit | chromosome | CDS | 76176 | 606 | - | 0.521452 |
livF | S4291 | ATP-binding component of leucine transport | chromosome | CDS | 4210058 | 714 | + | 0.57423 |
livG | S4290 | ATP-binding component of high-affinity branched-chain amino acid transport system | chromosome | CDS | 4209289 | 768 | + | 0.539062 |
livH | S4288 | high-affinity branched-chain amino acid transport protein, membrane component | chromosome | CDS | 4207092 | 927 | + | 0.557713 |
livJ | S4285 | high-affinity amino acid transport protein, periplasmic binding protein | chromosome | CDS | 4203769 | 1161 | + | 0.537468 |
livK | S4287 | high-affinity leucine-specific transport protein, periplasmic binding protein | chromosome | CDS | 4205935 | 1110 | + | 0.544144 |
livM | S4289 | high-affinity branched-chain amino acid transport protein, membrane component | chromosome | CDS | 4208015 | 1278 | + | 0.562598 |
lysA | S3046 | diaminopimelate decarboxylase | chromosome | CDS | 2932679 | 1263 | - | 0.528899 |
lysC | S3550 | aspartokinase III | chromosome | CDS | 3413860 | 1350 | - | 0.543704 |
lysP | S2370 | lysine-specific permease | chromosome | CDS | 2248995 | 1470 | - | 0.530612 |
malY | S1779 | cystathionine beta-lyase; maltose regulon modulator | chromosome | CDS | 1717311 | 1173 | + | 0.512361 |
metA | S3651 | homoserine transsuccinylase | chromosome | CDS | 3539458 | 930 | - | 0.504301 |
metB | S3730 | cystathionine gamma-synthase | chromosome | CDS | 3628308 | 1161 | - | 0.549526 |
metC | S3256 | cystathionine beta-lyase (beta-cystathionase) | chromosome | CDS | 3136340 | 1188 | + | 0.516835 |
metE | S3848 | tetrahydropteroyltriglutamatemethyltransferase | chromosome | CDS | 3744856 | 2262 | - | 0.557471 |
metF | S3728 | 5,10-methylene-tetrahydrofolate reductase | chromosome | CDS | 3624634 | 891 | - | 0.523008 |
metH | S3645 | B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase | chromosome | CDS | 3527156 | 3684 | - | 0.557275 |
metJ | S3731 | repressor of all met genes but metF | chromosome | CDS | 3629745 | 318 | + | 0.518868 |
metL | S3729 | aspartokinase II and homoserine dehydrogenase II | chromosome | CDS | 3625873 | 2433 | - | 0.581176 |
mtr | S3419 | tryptophan-specific transport protein | chromosome | CDS | 3287896 | 1245 | - | 0.53494 |
nanA | S3478 | N-acetylneuraminate lyase (aldolase) | chromosome | CDS | 3349862 | 894 | - | 0.521253 |
nanT | S3477 | sialic acid transporter | chromosome | CDS | 3348262 | 1521 | - | 0.552268 |
nikA | S4269 | periplasmic binding protein for nickel | chromosome | CDS | 4188238 | 1575 | - | 0.533968 |
nikB | S4268 | transport of nickel, membrane protein | chromosome | CDS | 4187294 | 945 | - | 0.579894 |
nikC | S4267 | transport of nickel, membrane protein | chromosome | CDS | 4186464 | 834 | - | 0.603118 |
nikD | S4266 | ATP-binding protein of nickel transport system | chromosome | CDS | 4185700 | 765 | - | 0.589543 |
nikE | S4265 | ATP-binding protein of nickel transport system | chromosome | CDS | 4184897 | 807 | - | 0.557621 |
nupG | S3164 | permease protein for nucleosides | chromosome | CDS | 3039941 | 1305 | + | 0.495785 |
oppA | S1330 | periplasmic oligopeptide binding protein | chromosome | CDS | 1296130 | 1632 | + | 0.479167 |
oppB | S1331 | oligopeptide transport permease protein | chromosome | CDS | 1297847 | 921 | + | 0.465798 |
oppC | S1332 | oligopeptide transport permease protein | chromosome | CDS | 1298782 | 909 | + | 0.529153 |
oppD | S1333 | ATP-binding protein of oligopeptide ABC transport system | chromosome | CDS | 1299702 | 1014 | + | 0.514793 |
oppF | S1334 | ATP-binding protein of oligopeptide ABC transport system | chromosome | CDS | 1300712 | 1005 | + | 0.518408 |
ordL | S1388 | probable oxidoreductase | chromosome | CDS | 1358244 | 1281 | + | 0.576893 |
pabA | S4384 | p-aminobenzoate synthetase, component II | chromosome | CDS | 4312665 | 564 | + | 0.537234 |
pabB | S1531 | p-aminobenzoate synthetase, component I | chromosome | CDS | 1491052 | 1362 | - | 0.507342 |
pabC | S1180 | 4-amino-4-deoxychorismate lyase | chromosome | CDS | 1143908 | 810 | + | 0.506173 |
pdxB | S2531 | erythronate-4-phosphate dehyrogenase | chromosome | CDS | 2424284 | 1137 | - | 0.5365 |
pepA | S4490 | aminopeptidase A/I | chromosome | CDS | 4393843 | 1512 | + | 0.546958 |
pepB | S2742 | putative peptidase | chromosome | CDS | 2633816 | 1284 | - | 0.560748 |
pepD | S0306 | aminoacyl-histidine dipeptidase (peptidase D) | chromosome | CDS | 305140 | 1458 | - | 0.514403 |
pepE | S3643 | peptidase E | chromosome | CDS | 3524525 | 690 | + | 0.542029 |
pepN | S0993 | aminopeptidase N | chromosome | CDS | 979813 | 2616 | + | 0.534404 |
pepP | S3093 | proline aminopeptidase P II | chromosome | CDS | 2979518 | 1326 | - | 0.536199 |
pepQ | S3829 | proline dipeptidase | chromosome | CDS | 3727869 | 1332 | - | 0.535285 |
pepT | S1209 | putative peptidase T | chromosome | CDS | 1175192 | 1227 | + | 0.493888 |
pheA | S2836 | chorismate mutase-P and prephenate dehydratase | chromosome | CDS | 2731030 | 1161 | + | 0.490095 |
pheP | S0491 | phenylalanine transport protein pheP | chromosome | CDS | 499989 | 1377 | + | 0.527233 |
potA | S1208 | ATP-binding component of spermidine/putrescine transport | chromosome | CDS | 1173806 | 1137 | - | 0.508355 |
potB | S1207 | spermidine/putrescine transport system permease | chromosome | CDS | 1172965 | 828 | - | 0.513285 |
potC | S1206 | spermidine/putrescine transport system permease | chromosome | CDS | 1172174 | 795 | - | 0.499371 |
potD | S1205 | spermidine/putrescine periplasmic transport protein | chromosome | CDS | 1171131 | 1047 | - | 0.512894 |
potE | S0615 | putrescine transport protein | chromosome | CDS | 631391 | 1320 | + | 0.503788 |
potF | S0850 | periplasmic putrescine-binding protein; permease protein | chromosome | CDS | 835358 | 1113 | + | 0.507637 |
potG | S0851 | ATP-binding component of putrescine transport system | chromosome | CDS | 836484 | 1215 | + | 0.557202 |
potH | S0852 | putrescine transport protein; permease | chromosome | CDS | 837708 | 954 | + | 0.506289 |
potI | S0853 | putrescine transport protein; permease | chromosome | CDS | 838658 | 846 | + | 0.553191 |
poxB | S0867 | pyruvate oxidase | chromosome | CDS | 853384 | 1719 | - | 0.536358 |
prlC | S4239 | oligopeptidase A | chromosome | CDS | 4152980 | 2043 | + | 0.552129 |
proA | S0314 | gamma-glutamylphosphate reductase | chromosome | CDS | 312385 | 1254 | + | 0.543062 |
proB | S0313 | gamma-glutamate kinase | chromosome | CDS | 311270 | 1104 | + | 0.557971 |
proC | S0330 | pyrroline-5-carboxylate reductase | chromosome | CDS | 333212 | 810 | - | 0.548148 |
proP | S3618 | low-affinity transport protein; proline permease II | chromosome | CDS | 3494116 | 1503 | + | 0.499002 |
proV | S2891 | glycine betaine/L-proline transport ATP-binding protein | chromosome | CDS | 2773346 | 1203 | + | 0.489609 |
proW | S2892 | glycine betaine/L-proline transport system permease protein | chromosome | CDS | 2774541 | 1065 | + | 0.58216 |
proX | S2893 | glycine betaine/L-proline transport system permease protein | chromosome | CDS | 2775663 | 993 | + | 0.526687 |
proY | S0347 | proline permease transport protein | chromosome | CDS | 349628 | 1374 | + | 0.525473 |
prsA | S1294 | phosphoribosylpyrophosphate synthetase | chromosome | CDS | 1257524 | 948 | - | 0.529536 |
ptrB | S1921 | protease II | chromosome | CDS | 1859845 | 2061 | - | 0.499272 |
rfc | S2219 | O-antigen polymerase | chromosome | CDS | 2093827 | 1149 | - | 0.273281 |
sapA | S1381 | peptide transport periplasmic protein | chromosome | CDS | 1349605 | 1644 | - | 0.541971 |
sapD | S1378 | putative ATP-binding protein of peptide transport system | chromosome | CDS | 1346774 | 993 | - | 0.50856 |
sdaA | S1529 | L-serine deaminase | chromosome | CDS | 1488922 | 1365 | - | 0.537729 |
sdaB | S3006 | L-serine dehydratase (deaminase), L-SD2 | chromosome | CDS | 2884704 | 1368 | + | 0.546053 |
sdaC | S3005 | probable serine transporter | chromosome | CDS | 2883357 | 1290 | + | 0.524806 |
selA | S4139 | selenocysteine synthase: L-seryl-tRNA (Ser) selenium transferase | chromosome | CDS | 4039671 | 1392 | + | 0.563937 |
selD | S1574 | selenophosphate synthase | chromosome | CDS | 1533119 | 1044 | + | 0.552682 |
serA | S3098 | D-3-phosphoglycerate dehydrogenase | chromosome | CDS | 2983573 | 1233 | - | 0.52717 |
serB | S4691 | 3-phosphoserine phosphatase | chromosome | CDS | 4582652 | 969 | + | 0.568627 |
serC | S0966 | 3-phosphoserine aminotransferase | chromosome | CDS | 943974 | 1089 | + | 0.504132 |
solA | S1143 | sarcosine oxidase-like protein | chromosome | CDS | 1110118 | 1119 | - | 0.524576 |
sorE | S3642 | putative L-sorbose-1-P-reductase | chromosome | CDS | 3522914 | 1230 | + | 0.528455 |
speA | S3133 | biosynthetic arginine decarboxylase | chromosome | CDS | 3014414 | 1977 | - | 0.538189 |
speB | S3129 | agmatinase | chromosome | CDS | 3012114 | 921 | - | 0.555918 |
speC | S3165 | ornithine decarboxylase isozyme | chromosome | CDS | 3041294 | 2196 | - | 0.520036 |
speD | S0119 | S-adenosylmethionine decarboxylase | chromosome | CDS | 132525 | 795 | - | 0.459119 |
speE | S0120 | spermidine synthase, putrescine aminopropyltransferase | chromosome | CDS | 133335 | 867 | - | 0.509804 |
tdcB | S3369 | threonine dehydratase | chromosome | CDS | 3247663 | 990 | - | 0.460606 |
tdcC | S3368 | anaerobically inducible permease for L-threonine and L-serine | chromosome | CDS | 3246310 | 1332 | - | 0.496246 |
tdh | S4111 | threonine dehydrogenase | chromosome | CDS | 4011400 | 1026 | + | 0.524366 |
thrA | S0002 | aspartokinase I, homoserine dehydrogenase I | chromosome | CDS | 336 | 2463 | + | 0.53309 |
thrB | S0003 | homoserine kinase | chromosome | CDS | 2800 | 933 | + | 0.562701 |
thrC | S0004 | threonine synthase | chromosome | CDS | 3733 | 1287 | + | 0.530692 |
tnaA | S4017 | tryptophanase | chromosome | CDS | 3911341 | 1416 | + | 0.503531 |
tnaB | S4018 | low-affinity tryptophan permease | chromosome | CDS | 3912847 | 1248 | + | 0.466346 |
trpA | S1349 | tryptophan synthase, alpha protein | chromosome | CDS | 1312603 | 807 | - | 0.539033 |
trpB | S1350 | tryptophan synthase, beta protein | chromosome | CDS | 1313409 | 1194 | - | 0.546064 |
trpC | S1351 | N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase | chromosome | CDS | 1314614 | 1362 | - | 0.524229 |
trpD | S1352 | anthranilate synthase component II, glutamine amidotransferase and phosphoribosylanthranilate transferase | chromosome | CDS | 1315976 | 1596 | - | 0.561404 |
trpE | S1353 | anthranilate synthase component I | chromosome | CDS | 1317571 | 1563 | - | 0.539987 |
tyrA | S2837 | chorismate mutase-T and prephenate dehydrogenase | chromosome | CDS | 2732233 | 1122 | - | 0.520499 |
tyrB | S3579 | tyrosine aminotransferase | chromosome | CDS | 3448962 | 1194 | + | 0.524288 |
tyrP | S2046 | tyrosine-specific transport protein | chromosome | CDS | 1962619 | 1212 | + | 0.509076 |
tyrR | S1412 | regulatory protein TyrR | chromosome | CDS | 1381480 | 1542 | + | 0.520104 |
usg | S2530 | putative PTS system enzyme II A component | chromosome | CDS | 2423205 | 1014 | - | 0.554241 |
wcaB | S2246 | putative transferase | chromosome | CDS | 2120292 | 489 | - | 0.550102 |
xasA | S1868 | acid sensitivity protein, putative transporter | chromosome | CDS | 1809541 | 1536 | + | 0.483073 |
xylE | S3557 | xylose-proton symportor | chromosome | CDS | 3422719 | 1476 | - | 0.485772 |
yaaU | S0044 | putative transport protein | chromosome | CDS | 44609 | 1395 | + | 0.522581 |
yabM | S0067 | putative transport protein | chromosome | CDS | 74949 | 1179 | + | 0.480916 |
yaeD | S0193 | putative phosphatase | chromosome | CDS | 213217 | 576 | + | 0.501736 |
yaeR | S0180 | hypothetical protein | chromosome | CDS | 202281 | 417 | + | 0.508393 |
ybaS | S0437 | putative glutaminase | chromosome | CDS | 447762 | 933 | + | 0.533762 |
ybaT | S0438 | putative amino acid/amine transport protein | chromosome | CDS | 448697 | 1293 | + | 0.531322 |
ybdA | S0511 | hypothetical membrane protein P43 | chromosome | CDS | 521656 | 1233 | + | 0.570965 |
ybdL | S0520 | putative aminotransferase | chromosome | CDS | 532840 | 1161 | + | 0.537468 |
ybdR | S0532 | putative oxidoreductase | chromosome | CDS | 543827 | 1239 | + | 0.504439 |
ybeJ | S0648 | putative periplasmic binding transport protein | chromosome | CDS | 659005 | 909 | + | 0.487349 |
ybgH | S0601 | putative transport protein | chromosome | CDS | 610617 | 1482 | + | 0.523617 |
ybgJ | S0599 | putative carboxylase | chromosome | CDS | 608924 | 657 | - | 0.572298 |
ybiB | S0791 | putative enzyme | chromosome | CDS | 774030 | 963 | + | 0.551402 |
ybiK | S0821 | putative asparaginase | chromosome | CDS | 806889 | 966 | + | 0.564182 |
ybjM | S0844 | hypothetical protein | chromosome | CDS | 831662 | 378 | + | 0.489418 |
ybjP | S0861 | putative enzyme | chromosome | CDS | 845503 | 516 | - | 0.540698 |
ybjU | S0866 | putative arylsulfatase | chromosome | CDS | 852346 | 1002 | - | 0.56487 |
ycaD | S0898 | putative transport protein | chromosome | CDS | 892021 | 1149 | + | 0.517842 |
ycdX | S1101 | hypothetical protein | chromosome | CDS | 1077989 | 738 | + | 0.48103 |
ycdZ | S1103 | hypothetical protein | chromosome | CDS | 1079376 | 522 | + | 0.542146 |
yceL | S1149 | hypothetical protein | chromosome | CDS | 1114771 | 1209 | - | 0.55335 |
ycjJ | S1383 | putative amino acid/amine transport protein | chromosome | CDS | 1351939 | 1386 | - | 0.535354 |
ycjQ | S1402 | putative oxidoreductase | chromosome | CDS | 1369742 | 1053 | + | 0.558405 |
yddG | S1885 | hypothetical protein | chromosome | CDS | 1827858 | 882 | + | 0.497732 |
ydeD | S1688 | hypothetical protein | chromosome | CDS | 1634343 | 801 | + | 0.498127 |
ydeF | S1687 | putative transport protein | chromosome | CDS | 1632862 | 1119 | - | 0.495085 |
ydgR | S1791 | putative transport protein | chromosome | CDS | 1729125 | 1503 | + | 0.511643 |
ydhC | S1820 | putative transport protein | chromosome | CDS | 1759190 | 1212 | + | 0.535479 |
ydiB | S1854 | putative oxidoreductase | chromosome | CDS | 1793614 | 867 | + | 0.477509 |
ydjE | S1569 | putative transport protein | chromosome | CDS | 1527148 | 1359 | + | 0.452539 |
ydjS | S1599 | hypothetical protein | chromosome | CDS | 1556904 | 969 | + | 0.534572 |
yecC | S2056 | putative ATP-binding component of a transport system | chromosome | CDS | 1969863 | 753 | - | 0.545817 |
yecS | S2057 | putative transport system permease protein (former yecC) | chromosome | CDS | 1970612 | 669 | - | 0.533632 |
yedA | S2098 | putative transmembrane subunit | chromosome | CDS | 2006086 | 921 | + | 0.536373 |
yedO | S2058 | putative 1-aminocyclopropane-1-carboxylate deaminase | chromosome | CDS | 1971295 | 1083 | - | 0.529086 |
yeeF | S2196 | putative amino acid/amine transport protein | chromosome | CDS | 2074188 | 1359 | - | 0.529065 |
yegB | S2267 | putative transport protein | chromosome | CDS | 2151108 | 1416 | + | 0.554379 |
yehW | S2342 | putative transport system permease protein | chromosome | CDS | 2217963 | 732 | - | 0.565574 |
yehX | S2343 | putative ATP-binding component of a transport system | chromosome | CDS | 2218699 | 927 | - | 0.558792 |
yehY | S2344 | putative transport system permease protein | chromosome | CDS | 2219618 | 1158 | - | 0.570812 |
yeiO | S2384 | putative transport | chromosome | CDS | 2265743 | 1179 | + | 0.53011 |
yejA | S2393 | hypothetical protein | chromosome | CDS | 2275020 | 1815 | + | 0.506336 |
yffG | S2661 | putative oxidoreductase, Fe-S subunit | chromosome | CDS | 2549682 | 1980 | - | 0.55505 |
yfhB | S2779 | hypothetical protein | chromosome | CDS | 2676374 | 573 | - | 0.532286 |
yfhO | S2749 | putative aminotransferase | chromosome | CDS | 2638939 | 1215 | - | 0.53251 |
yfiK | S2813 | hypothetical protein | chromosome | CDS | 2705908 | 588 | + | 0.511905 |
ygcS | S2980 | putative transport protein | chromosome | CDS | 2855260 | 1410 | - | 0.529078 |
ygeD | S3043 | putative resistance proteins | chromosome | CDS | 2927713 | 1191 | - | 0.558354 |
ygfD | S3103 | putative nucleotide-binding protein | chromosome | CDS | 2989337 | 996 | + | 0.538153 |
ygiC | S3283 | putative synthetase/amidase | chromosome | CDS | 3162220 | 1161 | + | 0.504737 |
ygjG | S3320 | probable ornithine aminotransferase | chromosome | CDS | 3198693 | 1290 | + | 0.550388 |
ygjI | S3325 | putative oxidoreductase | chromosome | CDS | 3205334 | 1434 | + | 0.498605 |
ygjU | S3336 | putative transport protein | chromosome | CDS | 3219032 | 1245 | + | 0.548594 |
ygjV | S3337 | hypothetical protein | chromosome | CDS | 3220281 | 552 | - | 0.5 |
yhaO | S3361 | putative transport system permease protein | chromosome | CDS | 3239303 | 1332 | - | 0.502252 |
yhaU | S3379 | putative transport protein | chromosome | CDS | 3256185 | 1335 | - | 0.506367 |
yhbE | S3442 | hypothetical protein | chromosome | CDS | 3315070 | 966 | - | 0.526915 |
yhdW | S3521 | putative periplasmic binding transport protein | chromosome | CDS | 3391510 | 918 | + | 0.489107 |
yhdY | S3526 | putative transport system permease protein | chromosome | CDS | 3394451 | 1104 | + | 0.51721 |
yhdZ | S3527 | putative ATP-binding component of a transport system | chromosome | CDS | 3395562 | 759 | + | 0.467721 |
yhfC | S4380 | putative transport protein | chromosome | CDS | 4309736 | 1182 | - | 0.51269 |
yhfX | S4363 | hypothetical protein | chromosome | CDS | 4292500 | 1164 | + | 0.541237 |
yhhK | S4286 | hypothetical protein | chromosome | CDS | 4205128 | 384 | - | 0.559896 |
yhhS | S4272 | putative transport | chromosome | CDS | 4191706 | 1260 | + | 0.55873 |
yhjE | S4212 | putative transport protein | chromosome | CDS | 4127224 | 1323 | - | 0.560091 |
yhjV | S4196 | putative transporter protein | chromosome | CDS | 4102153 | 1272 | - | 0.449686 |
yhjX | S4188 | putative resistance protein | chromosome | CDS | 4092147 | 1209 | + | 0.515302 |
yidG | S3982 | hypothetical protein | chromosome | CDS | 3877471 | 363 | - | 0.506887 |
yidR | S3996 | hypothetical protein | chromosome | CDS | 3889875 | 1275 | - | 0.536471 |
yidY | S4019 | putative transport protein | chromosome | CDS | 3914226 | 1176 | + | 0.529762 |
yieO | S3930 | putative transport protein | chromosome | CDS | 3823225 | 1404 | + | 0.49359 |
yifK | S3890 | putative amino acid/amine transport protein | chromosome | CDS | 3782457 | 1386 | - | 0.532468 |
yigJ | S3854 | hypothetical protein | chromosome | CDS | 3751792 | 369 | - | 0.509485 |
yigK | S3853 | hypothetical protein | chromosome | CDS | 3751314 | 417 | + | 0.503597 |
yigM | S3850 | hypothetical protein | chromosome | CDS | 3748194 | 900 | - | 0.548889 |
yihN | S3802 | putative resistance protein | chromosome | CDS | 3697339 | 1059 | - | 0.448536 |
yjcB | S3587 | hypothetical protein | chromosome | CDS | 3457386 | 351 | - | 0.535613 |
yjdE | S3622 | putative amino acid/amine transport protein | chromosome | CDS | 3499308 | 1338 | - | 0.543348 |
yjeH | S4562 | putative transport protein | chromosome | CDS | 4464969 | 1257 | - | 0.514718 |
yjeK | S4569 | hypothetical protein | chromosome | CDS | 4471209 | 1029 | - | 0.532556 |
yjfC | S4608 | putative synthetase/amidase | chromosome | CDS | 4508689 | 1164 | + | 0.532646 |
yjiZ | S4657 | putative transport protein | chromosome | CDS | 4551811 | 1362 | - | 0.517621 |
ylbB | S0458 | putative hydantoin utilization protein | chromosome | CDS | 466942 | 1158 | - | 0.515544 |
yneH | S1696 | putative glutaminase | chromosome | CDS | 1640697 | 927 | + | 0.517799 |
yphC | S2764 | putative oxidoreductase | chromosome | CDS | 2653160 | 1095 | - | 0.541552 |
ytfF | S4541 | putative transmembrane subunit | chromosome | CDS | 4447116 | 966 | + | 0.554865 |