Gene list
Applied filters:
COG category: Amino acid transport and metabolism
Organism: Yersinia pestis KIM, KIM
Number of genes found: 380
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Yersinia pestis KIM, KIM | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | unknown | pCD1 | CDS | 56297 | 192 | + | 0.380208 | |
adiA | biodegradative arginine decarboxylase | chromosome | CDS | 3293941 | 2307 | - | 0.468574 | |
ampG | ampG protein | chromosome | CDS | 1151521 | 1533 | - | 0.489889 | |
ansA | cytoplasmic L-asparaginase I | chromosome | CDS | 2389132 | 1017 | + | 0.476893 | |
ansB | periplasmic L-asparaginase II | chromosome | CDS | 3082839 | 1038 | - | 0.467245 | |
ansP | L-asparagine permease | chromosome | CDS | 2620844 | 1530 | + | 0.480392 | |
argA | N-acetylglutamate synthase | chromosome | CDS | 3473658 | 1326 | + | 0.477376 | |
argB | acetylglutamate kinase | chromosome | CDS | 334453 | 777 | + | 0.509652 | |
argC | N-acetyl-gamma-glutamylphosphate reductase | chromosome | CDS | 333283 | 1005 | + | 0.504478 | |
argD | acetylornithine delta-aminotransferase | chromosome | CDS | 4412569 | 1230 | + | 0.530081 | |
argE | acetylornithine deacetylase | chromosome | CDS | 331869 | 1170 | - | 0.504274 | |
argG | argininosuccinate synthetase | chromosome | CDS | 2858284 | 1371 | + | 0.501094 | |
argH | argininosuccinate lyase | chromosome | CDS | 335396 | 1374 | + | 0.50655 | |
argI | ornithine carbamoyltransferase 1 | chromosome | CDS | 824829 | 1008 | - | 0.490079 | |
aroA | 5-enolpyruvylshikimate-3-phosphate synthetase | chromosome | CDS | 3076707 | 1332 | - | 0.511261 | |
aroB | 3-dehydroquinate synthase | chromosome | CDS | 4389136 | 1089 | + | 0.497704 | |
aroC | chorismate synthase | chromosome | CDS | 1752273 | 1089 | + | 0.522498 | |
aroE | dehydroshikimate reductase | chromosome | CDS | 4465423 | 822 | + | 0.454988 | |
aroF | 3-deoxy-D-arabinoheptulosonate-7-phosphatesyntha se | chromosome | CDS | 1011371 | 1077 | + | 0.489322 | |
aroG | 3-deoxy-D-arabinoheptulosonate-7-phosphatesyntha se | chromosome | CDS | 3356671 | 1053 | - | 0.490029 | |
aroH | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tryptophan repressible) | chromosome | CDS | 2121245 | 1047 | - | 0.505253 | |
aroK | shikimate kinase I | chromosome | CDS | 4388558 | 522 | + | 0.478927 | |
aroL | shikimate kinase II | chromosome | CDS | 1097867 | 525 | + | 0.499048 | |
aroP | aromatic amino acid permease | chromosome | CDS | 2827315 | 1512 | - | 0.463624 | |
aroP | aromatic amino acid transport protein | chromosome | CDS | 852372 | 1401 | - | 0.48394 | |
artI | arginine 3rd transport system periplasmic binding protein | chromosome | CDS | 3134117 | 756 | + | 0.455026 | |
artJ | arginine 3rd transport system periplasmic binding protein | chromosome | CDS | 3144507 | 759 | + | 0.445323 | |
artM | arginine 3rd transport system permease protein | chromosome | CDS | 3135600 | 669 | + | 0.5142 | |
artP | ATP-binding component of 3rd arginine transport system | chromosome | CDS | 3133341 | 780 | + | 0.515385 | |
artQ | arginine 3rd transport system permease protein | chromosome | CDS | 3134884 | 717 | + | 0.509066 | |
asd | aspartate-semialdehyde dehydrogenase | chromosome | CDS | 4320862 | 1104 | + | 0.508152 | |
asnA | asparagine synthetase A | chromosome | CDS | 1185 | 993 | + | 0.455186 | |
asnB | asparagine synthetase B | chromosome | CDS | 1343238 | 1665 | - | 0.491892 | |
aspA | aspartate ammonia-lyase (aspartase) | chromosome | CDS | 684674 | 1437 | - | 0.471816 | |
aspC | aspartate aminotransferase | chromosome | CDS | 3048827 | 1206 | + | 0.495025 | |
avtA | alanine-alpha-ketoisovalerate | chromosome | CDS | 4549203 | 1371 | + | 0.478483 | |
bcr | bicyclomycin resistance protein; transmembrane protein | chromosome | CDS | 3222179 | 1200 | - | 0.500833 | |
brnQ | branched chain amino acid transport system II carrier protein | chromosome | CDS | 1110811 | 1320 | + | 0.499242 | |
carA | carbamoyl-phosphate synthetase, glutamine (small) subunit | chromosome | CDS | 4105321 | 1203 | - | 0.504572 | |
carB | carbamoyl-phosphate synthase large subunit | chromosome | CDS | 4102072 | 3234 | - | 0.516388 | |
cmr | proton motive force efflux pump protein | chromosome | CDS | 4512718 | 1230 | + | 0.517886 | |
cstC | acetylornithine delta-aminotransferase | chromosome | CDS | 2587160 | 1341 | - | 0.512304 | |
cycA | symporter of D-alanine, D-serine, and glycine | chromosome | CDS | 2708674 | 1425 | + | 0.465965 | |
cysD | ATP-sulfurylase, subunit 2 | chromosome | CDS | 924169 | 909 | + | 0.491749 | |
cysE | serine acetyltransferase | chromosome | CDS | 81056 | 825 | - | 0.49697 | |
cysK | cysteine synthase A, O-acetylserine sulfhydrolase A | chromosome | CDS | 1651772 | 969 | - | 0.499484 | |
cysK | cysteine synthase | chromosome | CDS | 4480139 | 1008 | + | 0.375 | |
cysM | cysteine synthase B, O-acetylserine sulfhydrolase B | chromosome | CDS | 1628785 | 879 | + | 0.5438 | |
cysZ | cysZ protein | chromosome | CDS | 1652897 | 735 | - | 0.480272 | |
dadA | D-amino acid dehydrogenase subunit | chromosome | CDS | 2403572 | 1305 | - | 0.526437 | |
dapA | dihydrodipicolinate synthase | chromosome | CDS | 1574439 | 900 | + | 0.491111 | |
dapB | dihydrodipicolinate reductase | chromosome | CDS | 4106969 | 822 | - | 0.502433 | |
dapD | 2,3,4,5-tetrahydropyridine-2-carboxylateN-succin yltransferase | chromosome | CDS | 3453526 | 870 | + | 0.487356 | |
dapE | N-succinyl-diaminopimelate deacylase | chromosome | CDS | 1582781 | 1128 | - | 0.52305 | |
dapF | diaminopimelate epimerase | chromosome | CDS | 430159 | 825 | + | 0.530909 | |
dcd | putative aromatic-L-amino-acid decarboxylase | chromosome | CDS | 3304002 | 1416 | - | 0.47952 | |
dppA | periplasmic dipeptide transport protein of ABC transporter | chromosome | CDS | 4255684 | 1608 | + | 0.48694 | |
dppB | dipeptide transport system inner membrane permease | chromosome | CDS | 4257574 | 948 | + | 0.535865 | |
dppC | dipeptide transport system permease protein 2 | chromosome | CDS | 4258603 | 903 | + | 0.541528 | |
dppC | dipeptide transport system permease protein 2 | chromosome | CDS | 819858 | 837 | - | 0.551971 | |
dppD | putative ATP-binding component of dipeptide transport system | chromosome | CDS | 818987 | 909 | - | 0.512651 | |
dppD | putative ATP-binding component of dipeptide ABC transport system | chromosome | CDS | 4259474 | 1026 | + | 0.523392 | |
dppF | putative ATP-binding component of dipeptide ABC transport system | chromosome | CDS | 4260532 | 1041 | + | 0.494717 | |
edd | 6-phosphogluconate dehydratase | chromosome | CDS | 1828080 | 1878 | + | 0.532481 | |
emrB | putative membrane translocase | chromosome | CDS | 1037490 | 1536 | - | 0.538411 | |
exuT | transport of hexuronates | chromosome | CDS | 3998477 | 1305 | + | 0.51341 | |
exuT | putative hexuronate transporter transmembrane protein | chromosome | CDS | 3558625 | 1308 | + | 0.495413 | |
fliY | putative periplasmic cysteine-binding ABC transport protein | chromosome | CDS | 2725052 | 801 | - | 0.484395 | |
gcvH | glycine cleavage complex protein H | chromosome | CDS | 3624411 | 387 | - | 0.49354 | |
gcvP | glycine decarboxylase | chromosome | CDS | 3621320 | 2880 | - | 0.514583 | |
gcvT | aminomethyltransferase of glycine cleavage system | chromosome | CDS | 3624866 | 1098 | - | 0.505464 | |
gdhA | NADP-specific glutamate dehydrogenase | chromosome | CDS | 4296885 | 1347 | - | 0.495174 | |
ggt | gamma-glutamyltranspeptidase | chromosome | CDS | 1117030 | 1515 | - | 0.506271 | |
glnA | glutamine synthetase | chromosome | CDS | 4224248 | 1434 | + | 0.505579 | |
glnB | regulatory protein P-II for glutamine synthetase | chromosome | CDS | 1465019 | 339 | + | 0.448378 | |
glnH | glutamine-binding periplasmic protein for high-affinity glutamine ABC transporter | chromosome | CDS | 1848912 | 744 | - | 0.461022 | |
glnK | nitrogen regulatory protein P-II 2 | chromosome | CDS | 1174831 | 339 | + | 0.448378 | |
glnP | inner membrane permease | chromosome | CDS | 1848221 | 657 | - | 0.520548 | |
glnQ | glutamine transport atp-binding protein | chromosome | CDS | 1049666 | 747 | + | 0.527443 | |
glnQ | ATP-binding component of glutamine high-affinity glutamine ABC transport system | chromosome | CDS | 1847502 | 723 | - | 0.499308 | |
gloA | lactoylglutathione lyase | chromosome | CDS | 2157416 | 447 | - | 0.483221 | |
glpB | sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit | chromosome | CDS | 453463 | 1293 | + | 0.525135 | |
gltB | glutamate synthase, large subunit | chromosome | CDS | 136757 | 4608 | + | 0.524957 | |
gltD | glutamate synthase, small subunit | chromosome | CDS | 141374 | 1419 | + | 0.513742 | |
gltI | solute-binding periplasmic protein of glutamate/aspartate ABC transporter | chromosome | CDS | 1332817 | 918 | - | 0.453159 | |
gltJ | glutamate/aspartate ABC transport system inner membrane permease | chromosome | CDS | 1331903 | 792 | - | 0.469697 | |
gltJ | putative glutamate/aspartate ABC transport system permease protein | chromosome | CDS | 4577748 | 738 | - | 0.49458 | |
gltK | glutamate/aspartate inner membrane permease | chromosome | CDS | 1331229 | 675 | - | 0.482963 | |
gltL | ATP-binding protein of glutamate/aspartate transport system | chromosome | CDS | 1330504 | 729 | - | 0.449931 | |
gltS | sodium/glutamate symporter | chromosome | CDS | 114221 | 1215 | - | 0.500412 | |
glyA | serine hydroxymethyltransferase | chromosome | CDS | 1470580 | 1254 | + | 0.487241 | |
gntP | high-affinity H+/gluconate symporter | chromosome | CDS | 3801394 | 1344 | + | 0.509673 | |
gntT | high-affinity H+/gluconate symporter | chromosome | CDS | 4316445 | 1317 | - | 0.511769 | |
goaG | 4-aminobutyrate aminotransferase | chromosome | CDS | 1544183 | 1314 | + | 0.533486 | |
hasA | secreted hemophore | chromosome | CDS | 340082 | 618 | + | 0.42233 | |
hcaT | MFS (major facilitator superfamily) transporter | chromosome | CDS | 1473177 | 1158 | + | 0.501727 | |
hisA | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'- phosphoribosyl)-4-imidazolecarboxamide isomerase | chromosome | CDS | 2889594 | 738 | + | 0.554201 | |
hisB | imidazoleglycerolphosphate dehydratase; histidinol-phosphate phosphatase | chromosome | CDS | 2887931 | 1068 | + | 0.5103 | |
hisC | histidinol-phosphate aminotransferase | chromosome | CDS | 2886786 | 1149 | + | 0.517842 | |
hisD | L-histidinal:NAD+ oxidoreductase | chromosome | CDS | 2885452 | 1332 | + | 0.535285 | |
hisF | imidazole glycerol phosphate synthase subunit; imidazole glycerol phsphate synthase holoenzyme | chromosome | CDS | 2890313 | 777 | + | 0.507079 | |
hisG | ATP phosphoribosyltransferase | chromosome | CDS | 2884549 | 900 | + | 0.515556 | |
hisH | glutamine amidotransferase subunit of heterodimer with HisF | chromosome | CDS | 2888998 | 591 | + | 0.522843 | |
hisI | phosphoribosyl-amp cyclohydrolase | chromosome | CDS | 2891083 | 615 | + | 0.497561 | |
hisJ | histidine-binding periplasmic protein of high-affinity histidine transport system | chromosome | CDS | 1776638 | 1056 | + | 0.444129 | |
hisM | histidine ABC transporter, inner membrane permease | chromosome | CDS | 1778479 | 717 | + | 0.458856 | |
hisP | ATP-binding component of histidine ABC transport | chromosome | CDS | 1779209 | 798 | + | 0.461153 | |
hisQ | histidine ABC transport system inner membrane permease | chromosome | CDS | 1777796 | 687 | + | 0.494905 | |
hmsH | outer membrane protein | chromosome | CDS | 2604061 | 1218 | - | 0.455665 | |
hpaF | putative 5-carboxymethyl-2-hydroxymuconate isomerase | chromosome | CDS | 2805660 | 399 | - | 0.483709 | |
hpaX | hypothetical 4-hydroxyphenylacetate permease | chromosome | CDS | 2802653 | 1368 | - | 0.491959 | |
ilvA | threonine deaminase (dehydratase) | chromosome | CDS | 375629 | 1545 | + | 0.53657 | |
ilvB | acetolactate synthase I,valine-sensitive, large subunit | chromosome | CDS | 2346815 | 1683 | + | 0.498515 | |
ilvC | ketol-acid reductoisomerase | chromosome | CDS | 381832 | 1479 | + | 0.503043 | |
ilvD | dihydroxyacid dehydratase | chromosome | CDS | 373725 | 1899 | + | 0.527646 | |
ilvE | branched-chain amino-acid aminotransferase | chromosome | CDS | 372461 | 1002 | + | 0.511976 | |
ilvG | acetohydroxy acid synthase II | chromosome | CDS | 370613 | 1647 | + | 0.532483 | |
ilvH | acetolactate synthase III, small subunit | chromosome | CDS | 4034298 | 525 | - | 0.518095 | |
ilvI | acetolactate synthase III, large subunit | chromosome | CDS | 4034795 | 1782 | - | 0.497194 | |
ilvN | acetolactate synthase I, valine sensitive, small subunit | chromosome | CDS | 2348484 | 318 | + | 0.487421 | |
lacY | galactoside permease (M protein) | chromosome | CDS | 2842618 | 1245 | + | 0.44498 | |
lcrG | low calcium response locus protein G | pCD1 | CDS | 25022 | 288 | + | 0.46875 | |
leuA | 2-isopropylmalate synthase | chromosome | CDS | 4042224 | 1563 | + | 0.477927 | |
leuB | 3-isopropylmalate dehydrogenase | chromosome | CDS | 4043783 | 1098 | + | 0.509107 | |
leuC | 3-isopropylmalate isomerase (dehydratase) subunit | chromosome | CDS | 4044813 | 1500 | + | 0.536 | |
leuD | isopropylmalate isomerase subunit | chromosome | CDS | 4046327 | 603 | + | 0.442786 | |
livF | ATP-binding component of ABC transporter | chromosome | CDS | 3306413 | 762 | - | 0.489501 | |
livF | ATP-binding component of leucine transport | chromosome | CDS | 474674 | 732 | + | 0.490437 | |
livG | ATP-binding component of high-affinity branched-chain amino acid ABC transport system | chromosome | CDS | 473892 | 768 | + | 0.535156 | |
livH | high-affinity branched-chain amino acid ABC transport system membrane permease | chromosome | CDS | 471686 | 927 | + | 0.501618 | |
livK | high-affinity leucine-specificleucine-specific-binding periplasmic protein of high-affinity branched-chain amino acid ABC transporter transport system | chromosome | CDS | 470375 | 1131 | + | 0.50221 | |
livM | inner membrane permease of high-affinity branched-chain amino acid ABC transport system | chromosome | CDS | 472609 | 1287 | + | 0.525253 | |
lysA | diaminopimelate decarboxylase | chromosome | CDS | 3505383 | 1263 | - | 0.509897 | |
lysC | aspartokinase III, lysine sensitive | chromosome | CDS | 36445 | 1386 | - | 0.527417 | |
lysP | lysine-specific permease | chromosome | CDS | 3175481 | 1512 | - | 0.491402 | |
metA | homoserine transsuccinylase | chromosome | CDS | 18140 | 930 | + | 0.445161 | |
metC | cystathionine beta-lyase (beta-cystathionase) | chromosome | CDS | 604714 | 1182 | + | 0.454315 | |
metC | cystathionine beta-lyase (beta-cystathionase) | chromosome | CDS | 3878312 | 1212 | + | 0.484323 | |
metE | tetrahydropteroyltriglutamatemethyltransferase | chromosome | CDS | 491355 | 2292 | + | 0.497818 | |
metF | 5,10-methylenetetrahydrofolate reductase | chromosome | CDS | 325700 | 885 | + | 0.499435 | |
metH | B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase, repressor of metE and metF | chromosome | CDS | 25420 | 3696 | + | 0.51921 | |
metJ | repressor of all met genes but metF | chromosome | CDS | 321175 | 318 | - | 0.493711 | |
metL | aspartokinase II and homoserine dehydrogenase II | chromosome | CDS | 323032 | 2436 | + | 0.525862 | |
mtr | tryptophan-specific transport protein | chromosome | CDS | 3203259 | 1245 | + | 0.514859 | |
nanT | sialic acid transporter | chromosome | CDS | 1622941 | 1533 | + | 0.506197 | |
oppA | oligopeptide ABC transporter; periplasmic binding protein | chromosome | CDS | 2233804 | 1638 | + | 0.42735 | |
oppB | oligopeptide ABC transporter; permease protein | chromosome | CDS | 2235528 | 921 | + | 0.438654 | |
oppC | oligopeptide ABC transporter; permease protein | chromosome | CDS | 2236467 | 906 | + | 0.470199 | |
oppD | ATP-binding protein of oligopetide ABC transporter | chromosome | CDS | 2237384 | 1002 | + | 0.46507 | |
oppF | ATP-binding protein of oligopetide ABC transporter | chromosome | CDS | 2238382 | 1002 | + | 0.453094 | |
pabA | p-aminobenzoate synthetase, component II | chromosome | CDS | 4411873 | 576 | + | 0.519097 | |
pabB | p-aminobenzoate synthetase, component I | chromosome | CDS | 2796181 | 1377 | + | 0.511256 | |
pabC | 4-amino-4-deoxychorismate lyase | chromosome | CDS | 1944034 | 807 | + | 0.488228 | |
pdxB | erythronate-4-phosphate dehydrogenase | chromosome | CDS | 1765624 | 1188 | + | 0.537037 | |
pepA | aminopeptidase A/I | chromosome | CDS | 830845 | 1512 | - | 0.519841 | |
pepB | putative peptidase | chromosome | CDS | 1485808 | 1299 | + | 0.535027 | |
pepD | aminoacyl-histidine dipeptidase (peptidase D) | chromosome | CDS | 1081947 | 1461 | - | 0.485969 | |
pepN | aminopeptidase N | chromosome | CDS | 3040770 | 2616 | - | 0.474006 | |
pepP | proline aminopeptidase P II | chromosome | CDS | 3629300 | 1314 | - | 0.51446 | |
pepQ | proline dipeptidase | chromosome | CDS | 517216 | 1335 | + | 0.453933 | |
pepT | putative peptidase T | chromosome | CDS | 1971063 | 1266 | + | 0.451817 | |
potA | spermidine/putrescine transport ATP-binding protein | chromosome | CDS | 1588170 | 1098 | + | 0.507286 | |
potF | periplasmic putrescine-binding protein of putrescine ABC transporter | chromosome | CDS | 3150331 | 1227 | - | 0.485738 | |
potG | ATP-binding component of putrescine ABC transport system | chromosome | CDS | 3149027 | 1134 | - | 0.503527 | |
potH | putrescine permease of ABC transporter | chromosome | CDS | 3148037 | 966 | - | 0.498965 | |
potI | putrescine ABC transport protein; permease | chromosome | CDS | 3147195 | 846 | - | 0.537825 | |
poxB | pyruvate oxidase | chromosome | CDS | 3126012 | 1722 | + | 0.522648 | |
prlC | oligopeptidase A | chromosome | CDS | 4292422 | 2043 | + | 0.519824 | |
proA | gamma-glutamylphosphate reductase | chromosome | CDS | 1092769 | 1260 | + | 0.506349 | |
proB | gamma-glutamate kinase | chromosome | CDS | 1091656 | 1104 | + | 0.525362 | |
proC | putative pyrroline-5-carboxylate reductase | chromosome | CDS | 3661601 | 822 | + | 0.509732 | |
proV | ATP-binding component of high affinity transport system for glycine, betaine and proline | chromosome | CDS | 1370286 | 1317 | - | 0.451025 | |
proW | permease of high-affinity ABC transport system for glycine betaine and proline | chromosome | CDS | 1369127 | 1167 | - | 0.54413 | |
proX | solute-binding periplasmic protein of high-affinity glycine betaine/proline ABC transporterhigh-affinity ABC transport system for glycine betaine and | chromosome | CDS | 1368075 | 1005 | - | 0.488557 | |
proY | proline permease transport protein | chromosome | CDS | 1112206 | 1392 | + | 0.457615 | |
proY | aromatic amino acid permease | chromosome | CDS | 4474434 | 1419 | - | 0.489782 | |
prsA | phosphoribosylpyrophosphate synthetase | chromosome | CDS | 2531064 | 966 | + | 0.5 | |
psaA | pH 6 Antigen fimbrial subunit | chromosome | CDS | 3184479 | 492 | - | 0.424797 | |
ptrB | protease II | chromosome | CDS | 2789117 | 2052 | - | 0.464912 | |
putP | major sodium/proline symporter | chromosome | CDS | 2716137 | 1485 | - | 0.488215 | |
rhaT | rhamnose/proton symporter | chromosome | CDS | 669173 | 1089 | - | 0.490358 | |
rhtB | putative homoserine/homoserine lactone efflux protein | chromosome | CDS | 445873 | 621 | - | 0.481481 | |
rosA | putative drug efflux protein | chromosome | CDS | 1225486 | 1215 | - | 0.452675 | |
sapA | peptide-binding periplasmic protein of peptide ABC transport system | chromosome | CDS | 2177877 | 1647 | - | 0.489982 | |
sdaA | L-serine deaminase | chromosome | CDS | 2798861 | 1365 | + | 0.512088 | |
sdaC | probable serine transporter | chromosome | CDS | 3160478 | 1323 | + | 0.472411 | |
selA | selenocysteine synthase: L-seryl-tRNA (Ser) selenium transferase | chromosome | CDS | 4518293 | 1395 | - | 0.54767 | |
selD | selenophosphate synthase | chromosome | CDS | 2385180 | 1047 | - | 0.485196 | |
serA | D-3-phosphoglycerate dehydrogenase | chromosome | CDS | 3633170 | 1344 | - | 0.486607 | |
serB | 3-phosphoserine phosphatase | chromosome | CDS | 4156823 | 981 | - | 0.518858 | |
serC | 3-phosphoserine aminotransferase | chromosome | CDS | 3078156 | 1086 | - | 0.474217 | |
setA | putative efflux protein | chromosome | CDS | 4047170 | 1182 | - | 0.494924 | |
solA | sarcosine oxidase-like protein | chromosome | CDS | 1923586 | 1116 | - | 0.482079 | |
speA | biosynthetic arginine decarboxylase | chromosome | CDS | 3648406 | 1980 | - | 0.50101 | |
speC | ornithine decarboxylase isozyme | chromosome | CDS | 3689173 | 2163 | - | 0.453074 | |
speD | S-adenosylmethionine decarboxylase | chromosome | CDS | 867511 | 795 | - | 0.459119 | |
speE | spermidine synthase; putrescine aminopropyltransferase | chromosome | CDS | 868383 | 975 | - | 0.488205 | |
tdcB | threonine dehydratase | chromosome | CDS | 4555369 | 1038 | + | 0.521195 | |
tdh | threonine dehydrogenase | chromosome | CDS | 88947 | 1026 | - | 0.481481 | |
tesA | acyl-CoA thioesterase I | chromosome | CDS | 1238680 | 669 | - | 0.511211 | |
thrA | aspartokinase I, homoserine dehydrogenase I | chromosome | CDS | 4132749 | 2538 | - | 0.495272 | |
thrB | homoserine kinase | chromosome | CDS | 4131817 | 951 | - | 0.521556 | |
thrC | threonine synthase | chromosome | CDS | 4130524 | 1290 | - | 0.478295 | |
trpA | tryptophan synthase, alpha protein | chromosome | CDS | 2253591 | 876 | - | 0.482877 | |
trpB | tryptophan synthase, beta protein | chromosome | CDS | 2254466 | 1287 | - | 0.487179 | |
trpC | N-(5-phosphoribosyl)anthranilate isomerase | chromosome | CDS | 2255813 | 1428 | - | 0.509804 | |
trpE | anthranilate synthase component I | chromosome | CDS | 2258835 | 1566 | - | 0.505109 | |
tyrA | chorismate mutase-T | chromosome | CDS | 1012460 | 1122 | + | 0.487522 | |
tyrB | tyrosine aminotransferase | chromosome | CDS | 655413 | 1194 | + | 0.505025 | |
tyrP | tyrosine-specific transport system protein | chromosome | CDS | 3284753 | 1209 | + | 0.495451 | |
tyrR | transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport | chromosome | CDS | 2187482 | 1668 | + | 0.483213 | |
ureA | urease (urea amidohydrolase) gamma subunit | chromosome | CDS | 1386331 | 303 | + | 0.478548 | |
ureB | urease (urea amidohydrolase) beta subunit | chromosome | CDS | 1386644 | 477 | + | 0.486373 | |
ureC | urease (urea amidohydrolase) alpha subunit | chromosome | CDS | 1387276 | 1653 | + | 0.525106 | |
usg | putative enzyme | chromosome | CDS | 1766981 | 1011 | + | 0.533136 | |
y0010 | putative permease | chromosome | CDS | 9262 | 1425 | - | 0.464561 | |
y0207 | putative dehydroquinase | chromosome | CDS | 221831 | 453 | + | 0.481236 | |
y0217 | putative metabolite transport protein, permease | chromosome | CDS | 232190 | 1365 | - | 0.49011 | |
y0375 | putative amino acid/amine symporter | chromosome | CDS | 418412 | 1392 | + | 0.497126 | |
y0398 | threonine efflux protein | chromosome | CDS | 445202 | 621 | + | 0.515298 | |
y0440 | hypothetical protein | chromosome | CDS | 489491 | 933 | + | 0.50268 | |
y0537 | putative transporter protein | chromosome | CDS | 603382 | 1287 | + | 0.392385 | |
y0548 | hypothetical | chromosome | CDS | 615147 | 801 | - | 0.35206 | |
y0564 | hypothetical | chromosome | CDS | 631996 | 258 | + | 0.437984 | |
y0599 | putative oxidoreductase, Fe-S subunit | chromosome | CDS | 676119 | 2016 | + | 0.529266 | |
y0611 | hypothetical protein | chromosome | CDS | 690684 | 1029 | - | 0.474247 | |
y0674 | hypothetical protein | chromosome | CDS | 757207 | 987 | + | 0.486322 | |
y0734 | dipeptide ABC transporter, ATP binding protein | chromosome | CDS | 818284 | 717 | - | 0.524407 | |
y0737 | putative transport system permease protein | chromosome | CDS | 820713 | 1050 | - | 0.529524 | |
y0773 | hypothetical protein | chromosome | CDS | 866165 | 909 | - | 0.540154 | |
y0826 | putative cytochrome oxidase subunit | chromosome | CDS | 927422 | 336 | + | 0.505952 | |
y0838 | putative dehydrogenase | chromosome | CDS | 938941 | 1149 | + | 0.489121 | |
y0847 | hypothetical | chromosome | CDS | 947402 | 771 | - | 0.433204 | |
y0879 | permease of major facilitator superfamily | chromosome | CDS | 988067 | 1341 | - | 0.499627 | |
y0925 | hypothetical protein | chromosome | CDS | 1041642 | 774 | - | 0.514212 | |
y0926 | putative permease, major facilitator superfamily | chromosome | CDS | 1042575 | 1200 | - | 0.529167 | |
y0932 | putative solute-binding protein of ABC transporter | chromosome | CDS | 1047566 | 789 | + | 0.501901 | |
y0933 | putative inner membrane permease of ABC transporter | chromosome | CDS | 1048367 | 669 | + | 0.54858 | |
y0934 | putative permease of ABC transporter | chromosome | CDS | 1049032 | 654 | + | 0.525994 | |
y0939 | putative N-carbamyl-L-amino acid amidohydrolase | chromosome | CDS | 1053745 | 1296 | + | 0.563272 | |
y0986 | hypothetical | chromosome | CDS | 1118541 | 255 | - | 0.486275 | |
y1017 | putative transport protein | chromosome | CDS | 1143455 | 1371 | - | 0.48213 | |
y1037 | putative cysteine synthase | chromosome | CDS | 1169110 | 1041 | - | 0.472622 | |
y1047 | hypothetical protein | chromosome | CDS | 1180062 | 369 | - | 0.406504 | |
y1147 | putative malonic semialdehyde oxidative decarboxylase | chromosome | CDS | 1294522 | 1911 | + | 0.569335 | |
y1156 | hypothetical | chromosome | CDS | 1306600 | 204 | + | 0.411765 | |
y1231 | putative substrate-binding periplasmic protein of ABC transporter | chromosome | CDS | 1380321 | 1578 | + | 0.486058 | |
y1232 | putative permease of ABC transporter | chromosome | CDS | 1381883 | 984 | + | 0.512195 | |
y1233 | putative permease of ABC transporter | chromosome | CDS | 1382863 | 807 | + | 0.484511 | |
y1235 | putative ATP-binding protein of ABC transport system | chromosome | CDS | 1384429 | 705 | + | 0.489362 | |
y1244 | hypothetical | chromosome | CDS | 1392571 | 993 | + | 0.490433 | |
y1273 | putative carboxylase | chromosome | CDS | 1421531 | 546 | + | 0.53663 | |
y1274 | hypothetical | chromosome | CDS | 1422101 | 87 | + | 0.517241 | |
y1275 | putative carboxylase | chromosome | CDS | 1422181 | 951 | + | 0.538381 | |
y1306 | hypothetical protein | chromosome | CDS | 1448493 | 696 | + | 0.515805 | |
y1334 | putative aminotransferase | chromosome | CDS | 1480049 | 1230 | + | 0.488618 | |
y1366 | hypothetical | chromosome | CDS | 1518062 | 399 | - | 0.263158 | |
y1368 | hypothetical | chromosome | CDS | 1518981 | 396 | - | 0.260101 | |
y1369 | hypothetical | chromosome | CDS | 1519440 | 396 | - | 0.270202 | |
y1372 | hypothetical | chromosome | CDS | 1522115 | 480 | - | 0.329167 | |
y1383 | putative permease, major facilitator superfamily | chromosome | CDS | 1531695 | 1398 | - | 0.537911 | |
y1388 | ATP hydrolase of ABC transporter | chromosome | CDS | 1541053 | 1116 | - | 0.484767 | |
y1389 | putative transcriptional regulator | chromosome | CDS | 1542521 | 1506 | - | 0.545153 | |
y1391 | putative substrate-binding protein of ABC transporter | chromosome | CDS | 1545549 | 1029 | + | 0.482021 | |
y1392 | putative permease of ABC transporter | chromosome | CDS | 1546543 | 1347 | + | 0.52487 | |
y1393 | putative permease of ABC transporter | chromosome | CDS | 1547936 | 864 | + | 0.540509 | |
y1458 | putative acetylneuraminate lyase | chromosome | CDS | 1616586 | 900 | - | 0.485556 | |
y1475 | putative aminotransferase | chromosome | CDS | 1636083 | 1227 | + | 0.394458 | |
y1476 | hypothetical | chromosome | CDS | 1637328 | 207 | + | 0.36715 | |
y1477 | hypothetical | chromosome | CDS | 1637591 | 972 | + | 0.393004 | |
y1478 | putative permease | chromosome | CDS | 1638899 | 1461 | + | 0.393566 | |
y1507 | putative aminotransferase | chromosome | CDS | 1671269 | 1236 | + | 0.508091 | |
y1590 | putative peptidase | chromosome | CDS | 1756160 | 2091 | - | 0.530368 | |
y1595 | hypothetical | chromosome | CDS | 1763709 | 918 | - | 0.494553 | |
y1628 | putative aminotransferase | chromosome | CDS | 1798139 | 1293 | - | 0.491879 | |
y1652 | putative sugar transporter | chromosome | CDS | 1826176 | 1356 | + | 0.4941 | |
y1665 | putative enzyme | chromosome | CDS | 1840343 | 960 | + | 0.514583 | |
y1686 | hypothetical | chromosome | CDS | 1859041 | 1227 | + | 0.471068 | |
y1692 | putative tartrate dehydrogenase | chromosome | CDS | 1866294 | 1098 | + | 0.495446 | |
y1730 | putative permease, major facilitator superfamily | chromosome | CDS | 1913107 | 1359 | - | 0.479029 | |
y1734 | putative membrane protein | chromosome | CDS | 1918110 | 699 | + | 0.439199 | |
y1769 | putative shikimate 5-dehydrogenase | chromosome | CDS | 1951399 | 879 | + | 0.486917 | |
y1811 | hypothetical protein | chromosome | CDS | 1990689 | 216 | - | 0.462963 | |
y1829 | putative resistance protein, transport | chromosome | CDS | 2014178 | 1236 | - | 0.435275 | |
y1874 | putative transport protein | chromosome | CDS | 2069850 | 1368 | - | 0.512427 | |
y1922 | hypothetical | chromosome | CDS | 2116931 | 363 | + | 0.498623 | |
y1923 | hypothetical | chromosome | CDS | 2117236 | 441 | + | 0.428571 | |
y1938 | hypothetical protein | chromosome | CDS | 2136616 | 1233 | + | 0.519059 | |
y1948 | putative transport protein | chromosome | CDS | 2149686 | 1203 | - | 0.506234 | |
y1971 | putative transport protein | chromosome | CDS | 2170413 | 1554 | - | 0.478764 | |
y1992 | putative carboxypeptidase | chromosome | CDS | 2191689 | 771 | - | 0.500648 | |
y1993 | putative transport periplasmic protein | chromosome | CDS | 2192837 | 1617 | + | 0.435374 | |
y2013 | hypothetical protein | chromosome | CDS | 2219346 | 837 | - | 0.461171 | |
y2078 | putative transport protein | chromosome | CDS | 2289459 | 1311 | + | 0.474447 | |
y2108 | putative transport protein | chromosome | CDS | 2324410 | 1119 | - | 0.470063 | |
y2137 | putative arginine/ornithine antiporter | chromosome | CDS | 2361756 | 1392 | + | 0.487787 | |
y2141 | putative carboxypeptidase | chromosome | CDS | 2366029 | 1500 | + | 0.472 | |
y2170 | putative cobalt-nickel resistance (export) protein | chromosome | CDS | 2398961 | 1122 | + | 0.509804 | |
y2173 | hypothetical | chromosome | CDS | 2402354 | 1203 | + | 0.500416 | |
y2182 | putative aminotransferase | chromosome | CDS | 2413020 | 1200 | + | 0.523333 | |
y2183 | hypothetical | chromosome | CDS | 2414223 | 1173 | + | 0.544757 | |
y2272 | putative permease | chromosome | CDS | 2507857 | 1206 | + | 0.524046 | |
y2275 | hypothetical protein | chromosome | CDS | 2511071 | 849 | - | 0.491166 | |
y2279 | putative ABC transporter permease | chromosome | CDS | 2516387 | 867 | + | 0.537486 | |
y2280 | putative ABC transporter permease | chromosome | CDS | 2517250 | 837 | + | 0.523297 | |
y2336 | hypothetical | chromosome | CDS | 2570885 | 1971 | + | 0.468798 | |
y2341 | putative histidine degradation enzyme | chromosome | CDS | 2577224 | 894 | + | 0.493289 | |
y2345 | hypothetical protein | chromosome | CDS | 2582144 | 996 | - | 0.47992 | |
y2346 | hypothetical protein | chromosome | CDS | 2583197 | 1371 | - | 0.502553 | |
y2348 | hypothetical protein | chromosome | CDS | 2586078 | 1053 | - | 0.507123 | |
y2350 | multi modular; putative transcriptional regulator; also putative ATP-binding component of a transport system | chromosome | CDS | 2589041 | 1449 | - | 0.509317 | |
y2371 | putative transport protein | chromosome | CDS | 2615383 | 1641 | - | 0.521024 | |
y2372 | putative glutaminase | chromosome | CDS | 2617134 | 1023 | - | 0.495601 | |
y2375 | putative aminotransferase | chromosome | CDS | 2622569 | 1188 | - | 0.472222 | |
y2379 | putative major facilitator superfamily (MFS) transport protein (permease) | chromosome | CDS | 2626946 | 1278 | + | 0.50313 | |
y2387 | putative Histidine protein kinase sensor | chromosome | CDS | 2634761 | 3852 | + | 0.471184 | |
y2458 | putative ATP-binding component of ABC transport system | chromosome | CDS | 2723626 | 762 | - | 0.494751 | |
y2459 | putative ABC transporter permease for cystine | chromosome | CDS | 2724390 | 663 | - | 0.496229 | |
y2462 | putative 1-aminocyclopropane-1-carboxylate deaminase | chromosome | CDS | 2725976 | 1020 | - | 0.511765 | |
y2592 | putative inner membrane permease | chromosome | CDS | 2855195 | 1341 | + | 0.521253 | |
y2602 | putative transport protein | chromosome | CDS | 2865080 | 1401 | - | 0.48394 | |
y2612 | putative symporter | chromosome | CDS | 2876423 | 1392 | - | 0.515086 | |
y2689 | hypothetical | chromosome | CDS | 2969750 | 1233 | - | 0.566099 | |
y2701 | hypothetical | chromosome | CDS | 2984900 | 486 | + | 0.493827 | |
y2823 | putative arylsulfatase | chromosome | CDS | 3128082 | 1020 | + | 0.52549 | |
y2828 | putative chorismate mutase | chromosome | CDS | 3132537 | 561 | + | 0.456328 | |
y2834 | hypothetical | chromosome | CDS | 3136458 | 861 | - | 0.490128 | |
y2870 | hypothetical | chromosome | CDS | 3168037 | 651 | + | 0.485407 | |
y2896 | putative dehydrogenase | chromosome | CDS | 3200770 | 966 | + | 0.600414 | |
y2910 | hypothetical protein | chromosome | CDS | 3215283 | 1809 | + | 0.475401 | |
y2967 | hypothetical | chromosome | CDS | 3266683 | 1155 | + | 0.502164 | |
y2985 | putative transmembrane protein | chromosome | CDS | 3292605 | 891 | + | 0.499439 | |
y2988 | putative symporter | chromosome | CDS | 3296317 | 1335 | - | 0.471161 | |
y2990 | putative inner membrane permease of ABC transport system | chromosome | CDS | 3298135 | 837 | - | 0.502987 | |
y2991 | putative ATP-binding component of ABC transporter | chromosome | CDS | 3298968 | 939 | - | 0.480298 | |
y2992 | putative ABC transport system inner membrane permease | chromosome | CDS | 3299903 | 1155 | - | 0.484848 | |
y3000 | putative inner membrane permease of ABC transporter | chromosome | CDS | 3308038 | 1014 | - | 0.505917 | |
y3001 | putative branched chain inner membrane permease of ABC transporter | chromosome | CDS | 3309114 | 1617 | - | 0.500928 | |
y3002 | putative Leu/Ile/Val/Thr binding protein of ABC transporter | chromosome | CDS | 3310839 | 1299 | - | 0.498075 | |
y3027 | putative ATP-binding protein of ABC transporter | chromosome | CDS | 3335182 | 711 | + | 0.50211 | |
y3103 | putative phosphatase | chromosome | CDS | 3417772 | 567 | - | 0.442681 | |
y3118 | hypothetical protein | chromosome | CDS | 3428893 | 399 | - | 0.451128 | |
y3156 | hypothetical protein | chromosome | CDS | 3467489 | 1206 | + | 0.470149 | |
y3180 | putative resistance protein | chromosome | CDS | 3497971 | 1221 | - | 0.528256 | |
y3325 | hypothetical | chromosome | CDS | 3658420 | 1098 | + | 0.525501 | |
y3336 | putative glutaminase | chromosome | CDS | 3676233 | 927 | - | 0.487594 | |
y3364 | hypothetical | chromosome | CDS | 3708186 | 486 | + | 0.493827 | |
y3378 | hypothetical | chromosome | CDS | 3724277 | 1113 | - | 0.554358 | |
y3403 | possible peptidase | chromosome | CDS | 3766820 | 1233 | + | 0.497972 | |
y3418 | hypothetical | chromosome | CDS | 3790125 | 1002 | + | 0.50998 | |
y3421 | hypothetical | chromosome | CDS | 3792955 | 1347 | + | 0.466964 | |
y3434 | hypothetical protein | chromosome | CDS | 3821226 | 414 | + | 0.475845 | |
y3518 | putative synthetase/amidase | chromosome | CDS | 3900969 | 1161 | + | 0.464255 | |
y3523 | putative transport | chromosome | CDS | 3905571 | 1257 | - | 0.527446 | |
y3555 | aspartate aminotransferase | chromosome | CDS | 3935132 | 1233 | - | 0.425791 | |
y3595 | Na/dicarboxylate symporter | chromosome | CDS | 3990393 | 1320 | + | 0.481818 | |
y3691 | hypothetical | chromosome | CDS | 4101167 | 678 | + | 0.489676 | |
y3709 | putative proline/betaine transporter | chromosome | CDS | 4125055 | 1389 | - | 0.466523 | |
y3827 | hypothetical | chromosome | CDS | 4258500 | 93 | + | 0.419355 | |
y3850 | conserved hypothetical protein | chromosome | CDS | 4286984 | 1269 | - | 0.543735 | |
y3881 | hypothetical | chromosome | CDS | 4322656 | 375 | + | 0.418667 | |
y3947 | permease (major facilitator superfamily) | chromosome | CDS | 4402293 | 1185 | - | 0.476793 | |
y3962 | hypothetical | chromosome | CDS | 4420643 | 579 | + | 0.497409 | |
y4037 | putative histidine ammonia-lyase | chromosome | CDS | 4476255 | 1533 | - | 0.507502 | |
y4038 | putative urocanase | chromosome | CDS | 4477784 | 1707 | - | 0.511424 | |
y4041 | hypothetical | chromosome | CDS | 4481792 | 930 | + | 0.410753 | |
y4106 | putative ornithine cyclodeaminase | chromosome | CDS | 4556400 | 954 | + | 0.505241 | |
y4120 | hypothetical | chromosome | CDS | 4573302 | 621 | - | 0.351047 | |
y4123 | putative amino acid ABC transport system permease | chromosome | CDS | 4576991 | 810 | - | 0.502469 | |
y4125 | putative solute-binding periplasmic protein precursor for ABC transporter | chromosome | CDS | 4578668 | 855 | - | 0.454971 | |
ybtS | anthranilate synthase | chromosome | CDS | 2647129 | 1305 | - | 0.55249 | |
ybtX | hypothetical | chromosome | CDS | 2648461 | 1404 | - | 0.597578 | |
ydeF | putative transport protein | chromosome | CDS | 2925308 | 1182 | + | 0.461929 | |
yfeE | putative regulator of yfeABCD | chromosome | CDS | 2090024 | 555 | + | 0.425225 | |
yfuC | ATP-binding protein of iron ABC transporter | chromosome | CDS | 1685290 | 1050 | - | 0.525714 | |
yjiJ | putative transport protein | chromosome | CDS | 2939144 | 1152 | - | 0.538194 | |
yscB | Yop proteins translocation protein B homolog | pCD1 | CDS | 10483 | 414 | - | 0.417874 | |
yscH | Yop proteins translocation protein H homolog | pCD1 | CDS | 6094 | 498 | - | 0.429719 | |
yscM | Yop proteins translocation protein M homolog | pCD1 | CDS | 3193 | 348 | - | 0.479885 | |
ysuJ | putative decarboxylase | chromosome | CDS | 2908731 | 1548 | - | 0.425711 |