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2024-05-19 02:00:38

Gene list

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COG category: Amino acid transport and metabolism
Organism: Shigella flexneri 2a str. 301, 301

Number of genes found: 376

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Shigella flexneri 2a str. 301, 301
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SF1479 orf, conserved hypothetical proteinchromosome CDS1514700 1032 + 0.562016
NA SF2824 orf, conserved hypothetical proteinchromosome CDS2903772 1206 + 0.555556
NA SF3305 putative transport system permease proteinchromosome CDS3402395 492 + 0.47561
NA SF0780 putative transport proteinchromosome CDS813574 1539 + 0.521118
NA SF2921 putative oxidoreductasechromosome CDS3013407 990 - 0.522222
NA SF2855 putative transporter proteinchromosome CDS2946319 1119 + 0.436997
NA SF0782 putative transport system permease proteinchromosome CDS816053 912 + 0.528509
NA SF1720 putative transport system permease proteinchromosome CDS1754046 1146 + 0.446771
NA SF1741 putative ATP-binding component of a transport systemchromosome CDS1778364 987 + 0.541033
NA SF2708 orf, conserved hypothetical proteinchromosome CDS2782211 960 + 0.548958
NA SF2400 putative peptidasechromosome CDS2449827 2067 + 0.521045
NA SF3152 putative L-serine deaminasechromosome CDS3249791 1365 - 0.534066
NA SF2503 orf, conserved hypothetical proteinchromosome CDS2562973 480 - 0.497917
NA SF0781 putative transport system permease proteinchromosome CDS815130 921 + 0.533116
NA SF3963 orf, conserved hypothetical proteinchromosome CDS4092877 1146 + 0.397906
NA SF0698 putative DNA packaging protein of prophage; terminase small subunitchromosome CDS725857 324 + 0.447531
NA SF1448 putative transport proteinchromosome CDS1482521 1380 + 0.49058
NA SF2231 putative oxidoreductasechromosome CDS2256856 1239 + 0.514124
NA SF1427 putative repressor proteinchromosome CDS1465458 567 - 0.412698
NA SF4021 orf, conserved hypothetical proteinchromosome CDS4151154 939 + 0.536741
NA SF1626 putative arginine/ornithine antiporterchromosome CDS1654194 1383 + 0.532176
NA SF2502 orf, conserved hypothetical proteinchromosome CDS2561625 1374 - 0.590975
NA SF2709 orf, conserved hypothetical proteinchromosome CDS2783514 738 + 0.5271
NA SF0798 putative DEOR-type transcriptional regulatorchromosome CDS831548 1209 - 0.544251
NA SF1742 similar to ATP-binding protein of oligopeptide ABC transport systemchromosome CDS1779343 771 + 0.538262
NA SF1775 putative transport system permease proteinchromosome CDS1812397 795 - 0.543396
NA SF1619 orf, conserved hypothetical proteinchromosome CDS1646598 822 + 0.515815
NA SF2337 putative transport/receptor proteinchromosome CDS2385339 669 + 0.505232
NA SF2499 putative amino acid antiporterchromosome CDS2557990 1461 + 0.399042
NA SF2366 putative aminotransferasechromosome CDS2415674 1218 + 0.504105
NA SF1397 putative transport proteinchromosome CDS1437872 1485 - 0.513131
NA SF1963 similar to periplasmic glutamine-binding protein; permeasechromosome CDS1995731 858 - 0.495338
NA SF2432 similar to high-affinity transport permease for gluconatechromosome CDS2482029 219 + 0.479452
NA SF1721 putative amino acid/amine transport proteinchromosome CDS1755485 1161 + 0.459087
NA SF1552 similar to low-affinity transport protein; proline permease IIchromosome CDS1583809 981 + 0.478084
NA SF1447 putative oxidoreductasechromosome CDS1481418 1077 + 0.498607
NA SF2498 orf, conserved hypothetical proteinchromosome CDS2557526 213 + 0.492958
NA SF2398 putative transport proteinchromosome CDS2447054 1179 - 0.569126
NA SF2440 putative enzymechromosome CDS2493319 1695 - 0.464897
NA SF2445 putative aminotransferasechromosome CDS2500108 1239 - 0.551251
NA SF0266 putative Rhs-family proteinchromosome CDS282855 408 + 0.541667
NA SF1302 putative glutamine synthetasechromosome CDS1353762 1419 - 0.530655
NA SF1830 similar to multidrug resistant proteinchromosome CDS1869399 1455 - 0.421993
NA SF0233 orf, conserved hypothetical proteinchromosome CDS256552 345 - 0.443478
NA SF2504 orf, conserved hypothetical proteinchromosome CDS2563465 408 - 0.490196
NA SF4286 transport of lysine/cadaverinechromosome CDS4463884 1053 - 0.490029
NA SF2492 orf, conserved hypothetical proteinchromosome CDS2551677 660 - 0.563636
NA SF1841 putative transport periplasmic proteinchromosome CDS1880471 1635 - 0.477676
NA SF1850 orf, conserved hypothetical proteinchromosome CDS1887237 342 - 0.461988
NA SF2802 putative transport proteinchromosome CDS2879734 1368 - 0.520468
adiA SF4106 biodegradative arginine decarboxylasechromosome CDS4268036 2268 + 0.525132
ampG SF0377 beta-lactamase induction signal transducer AmpGchromosome CDS387169 1476 - 0.542683
ansA SF1456 cytoplasmic L-asparaginase Ichromosome CDS1490877 1017 - 0.508358
ansB SF2954 periplasmic L-asparaginase IIchromosome CDS3041781 1047 - 0.52531
araE SF2851 low-affinity L-arabinose transport system proton symport proteinchromosome CDS2941125 1419 - 0.512333
arcC SF0452 putative carbamate kinasechromosome CDS469020 894 + 0.571588
argA SF2829 N-acetylglutamate synthase; amino acid acetyltransferasechromosome CDS2909567 1332 + 0.527027
argB SF4036 acetylglutamate kinasechromosome CDS4170772 774 + 0.550388
argC SF4035 N-acetyl-gamma-glutamylphosphate reductasechromosome CDS4169757 1005 + 0.534328
argD SF3378 acetylornithine delta-aminotransferasechromosome CDS3458170 1221 - 0.543817
argE SF4034 acetylornithine deacetylasechromosome CDS4168452 1152 - 0.513889
argG SF3213 argininosuccinate synthetasechromosome CDS3310820 1344 + 0.523065
argH SF4037 argininosuccinate lyasechromosome CDS4171606 1374 + 0.560408
argI SF4235 ornithine carbamoyltransferase 1chromosome CDS4409159 1014 + 0.504931
argT SF2386 lysine-, arginine-, ornithine-binding periplasmic proteinchromosome CDS2435121 783 - 0.498084
aroA SF0903 5-enolpyruvylshikimate-3-phosphate synthetasechromosome CDS941164 1284 + 0.507788
aroB SF3407 3-dehydroquinate synthasechromosome CDS3486612 1089 - 0.5427
aroC SF2405 chorismate synthasechromosome CDS2454511 1086 - 0.566298
aroD SF1723 3-dehydroquinate dehydratasechromosome CDS1757554 759 + 0.509881
aroE SF3313 dehydroshikimate reductasechromosome CDS3412810 819 - 0.492063
aroF SF2661 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tyrosine repressible)chromosome CDS2738732 1071 - 0.511671
aroG SF0550 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, phenylalanine repressible)chromosome CDS571488 1053 - 0.512821
aroH SF1526 3-deoxy-D-arabinoheptulosonate-7-phosphatesyntha sechromosome CDS1557527 1047 - 0.529131
aroK SF3408 shikimate kinase Ichromosome CDS3487757 723 - 0.485477
aroL SF0324 shikimate kinase IIchromosome CDS335648 525 + 0.52
aroP SF0109 aromatic amino acid transport proteinchromosome CDS118442 1374 - 0.526929
artI SF0817 arginine 3rd transport system periplasmic binding proteinchromosome CDS848990 732 - 0.489071
artJ SF0814 arginine 3rd transport system periplasmic binding proteinchromosome CDS846576 732 - 0.456284
artM SF0815 arginine 3rd transport system permease proteinchromosome CDS847599 669 - 0.527653
artP SF0818 ATP-binding component of 3rd arginine transport systemchromosome CDS849739 729 - 0.526749
artQ SF0816 arginine 3rd transport system permease proteinchromosome CDS848267 717 - 0.542538
asd SF3456 aspartate-semialdehyde dehydrogenasechromosome CDS3546424 1104 - 0.540761
asnA SF3824 asparagine synthetase Achromosome CDS3934423 993 + 0.564955
asnB SF0619 asparagine synthetase Bchromosome CDS652658 1548 + 0.511628
aspA SF4293 aspartate ammonia-lyase (aspartase)chromosome CDS4470511 1482 - 0.489204
aspC SF0925 aspartate aminotransferasechromosome CDS969743 1191 - 0.518052
avtA SF3616 alanine-alpha-ketoisovalerate/valine-pyruvate transaminase Cchromosome CDS3721280 1254 + 0.523923
bcr SF2269 bicyclomycin resistance protein; transmembrane proteinchromosome CDS2301773 1191 - 0.530647
brnQ SF0338 branched-chain amino-acid transport system II carrier proteinchromosome CDS349099 1320 + 0.554545
carA SF0029 carbamoyl-phosphate synthetase, glutamine (small) subunitchromosome CDS29081 1149 + 0.534378
carB SF0030 carbamoyl-phosphate synthase large subunitchromosome CDS30247 3222 + 0.557107
cmr SF0795 chloramphenicol resistance pump Cmrchromosome CDS829096 1227 + 0.521597
cycA SF4278 transport protein for D-alanine, D-serine, and glycinechromosome CDS4456703 1413 - 0.527955
cysD SF2775 ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 2chromosome CDS2847558 909 - 0.537954
cysE SF3646 serine acetyltransferasechromosome CDS3754337 822 - 0.53163
cysH SF2778 3-phosphoadenosine 5-phosphosulfate reductasechromosome CDS2851602 735 - 0.514286
cysK SF2469 cysteine synthase A, O-acetylserine sulfhydrolase Achromosome CDS2529710 972 + 0.5
cysM SF2476 cysteine synthase B, O-acetylserine sulfhydrolase Bchromosome CDS2535976 912 - 0.559211
cysZ SF2468 sulfate transport proteinchromosome CDS2528764 762 + 0.5
dadA SF1178 D-amino acid dehydrogenase subunitchromosome CDS1221262 1299 + 0.555812
dapA SF2521 dihydrodipicolinate synthasechromosome CDS2586940 879 - 0.516496
dapB SF0028 dihydrodipicolinate reductasechromosome CDS27804 822 + 0.530414
dapD SF0156 2,3,4,5-tetrahydropyridine-2-carboxylateN-succin yltransferasechromosome CDS176067 825 - 0.528485
dapE SF2514 N-succinyl-diaminopimelate deacylasechromosome CDS2579665 1128 + 0.531028
dapF SF3887 diaminopimelate epimerasechromosome CDS4006465 828 + 0.550725
dcp SF1557 dipeptidyl carboxypeptidase IIchromosome CDS1588413 2046 + 0.499511
dgoT SF3772 D-galactonate transport proteinchromosome CDS3880981 1338 + 0.529895
dppA SF3579 dipeptide transport proteinchromosome CDS3677161 1608 - 0.518657
dppB SF3578 dipeptide transport system permease protein 1chromosome CDS3675834 1020 - 0.561765
dppC SF3577 dipeptide transport system permease protein 2chromosome CDS3674922 903 - 0.589147
dppD SF3576 putative ATP-binding component of dipeptide transport systemchromosome CDS3673928 984 - 0.558943
dppF SF3575 putative ATP-binding component of dipeptide transport systemchromosome CDS3672927 1005 - 0.558209
dsdA SF2433 D-serine dehydratase (deaminase)chromosome CDS2482265 1329 + 0.505643
edd SF1861 6-phosphogluconate dehydratasechromosome CDS1896666 1812 - 0.535872
emrB SF2713 multidrug resistant protein emrBchromosome CDS2786514 1539 + 0.560754
emrD SF3789 multidrug resistance protein Dchromosome CDS3897624 1053 - 0.578348
emrY SF2434 multidrug resistance protein Ychromosome CDS2483701 1539 - 0.418454
exuT SF3133 transport protein of hexuronateschromosome CDS3235660 1299 + 0.543495
flhE SF1922 flagellar proteinchromosome CDS1957422 339 - 0.557522
fsr SF0424 fosmidomycin resistance proteinchromosome CDS439897 1221 - 0.523342
gabP SF2690 transport permease protein of gamma-aminobutyratechromosome CDS2766749 1278 + 0.521909
gabT SF2689 GABA transaminasechromosome CDS2765447 1128 + 0.591312
gadA SF3594 glutamate decarboxylase isozymechromosome CDS3695528 1401 + 0.539615
gadB SF1734 glutamate decarboxylase isozymechromosome CDS1770262 1401 + 0.538901
galP SF2934 galactose:proton symporter, MFS familychromosome CDS3026626 1356 + 0.533186
gatD SF2151 galactitol-1-phosphate dehydrogenasechromosome CDS2176736 1041 - 0.483189
gcvH SF2890 carrier of aminomethyl moiety via covalently bound lipoyl cofactor in glycine cleavage complexchromosome CDS2983074 390 - 0.523077
gcvP SF2889 glycine decarboxylase, P protein of glycine cleavage systemchromosome CDS2980082 2874 - 0.559499
gcvR SF2522 transcriptional regulation of gcv operonchromosome CDS2587964 573 + 0.500873
gcvT SF2891 aminomethyltransferase (T protein; tetrahydrofolate-dependent) of glycine cleavage systemchromosome CDS2983487 1095 - 0.542466
gdhA SF1462 NADP-specific glutamate dehydrogenasechromosome CDS1499038 1167 - 0.538989
ggt SF3464 gamma-glutamyltranspeptidasechromosome CDS3554333 1743 - 0.550775
glnA SF3940 glutamine synthetasechromosome CDS4069201 1410 - 0.528369
glnB SF2600 regulatory protein P-II for glutamine synthetasechromosome CDS2671941 339 - 0.510324
glnH SF0762 periplasmic glutamine-binding protein; permeasechromosome CDS791320 747 - 0.485944
glnK SF0395 nitrogen regulatory protein P-II 2chromosome CDS407691 339 + 0.510324
glnP SF0761 glutamine transport protein GlnPchromosome CDS790522 660 - 0.536364
glnQ SF0760 ATP-binding component of glutamine high-affinity transport systemchromosome CDS789803 723 - 0.542185
gloA SF1678 lactoylglutathione lyasechromosome CDS1705939 408 + 0.512255
glpB SF2324 sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunitchromosome CDS2371019 1260 + 0.557143
gltB SF3252 glutamate synthase, large subunitchromosome CDS3346784 4569 + 0.571241
gltD SF3253 glutamate synthase, small subunitchromosome CDS3351365 1419 + 0.551092
gltJ SF0627 glutamate/aspartate transport system permeasechromosome CDS663851 741 + 0.530364
gltK SF0628 glutamate/aspartate transport system permeasechromosome CDS664591 675 + 0.502222
gltL SF0629 ATP-binding protein of glutamate/aspartate transport systemchromosome CDS665265 726 + 0.523416
gltS SF3693 glutamate transport proteinchromosome CDS3797641 1206 - 0.538972
glyA SF2598 serine hydroxymethyltransferasechromosome CDS2669126 1254 - 0.5311
gntP SF4199 gluconate transport system permease 3chromosome CDS4373139 1344 + 0.529018
gntT SF3438 high-affinity transport permease for gluconatechromosome CDS3517855 1317 + 0.537585
gntU SF3458 low-affinity gluconate transport permease proteinchromosome CDS3548369 1278 - 0.557903
goaG SF1307 4-aminobutyrate aminotransferasechromosome CDS1359697 1266 + 0.57109
gsp SF3035 glutathionylspermidine synthetase/amidasechromosome CDS3131980 1860 - 0.522581
hcaT SF2583 MFS (major facilitator superfamily) transporterchromosome CDS2651560 1140 - 0.564035
hisA SF2086 N-(5-phospho-L-ribosyl-formimino)-5-amino-1-(5- phosphoribosyl)-4-imidazolecarboxamide isomerasechromosome CDS2101463 738 + 0.562331
hisB SF2084 imidazole glycerol phosphate dehydratase and histidinol-phosphate phosphatasechromosome CDS2099806 1068 + 0.531835
hisC SF2083 histidinol-phosphate aminotransferasechromosome CDS2098736 1071 + 0.54902
hisD SF2082 oxidoreductase for L-histidinal:NAD+ and L-histidinol:NAD+chromosome CDS2097435 1305 + 0.577778
hisF SF2087 imidazole glycerol phosphate synthase subunit in heterodimer with HisH, imidazole glycerol phsphate synthase holoenzymechromosome CDS2102182 777 + 0.519949
hisG SF2081 ATP phosphoribosyltransferasechromosome CDS2096530 900 + 0.545556
hisH SF2085 glutamine amidotransferase subunit of heterodimer with HisF, imidazole glycerol phosphate synthase holoenzymechromosome CDS2100873 591 + 0.556684
hisI SF2088 phosphoribosyl-amp cyclohydrolase; phosphoribosyl-ATP pyrophosphatasechromosome CDS2102952 612 + 0.521242
hisJ SF2385 histidine-binding periplasmic protein of high-affinity histidine transport systemchromosome CDS2434106 795 - 0.496855
hisM SF2383 histidine transport, membrane protein Mchromosome CDS2432630 717 - 0.500697
hisP SF2382 ATP-binding component of histidine transportchromosome CDS2431849 774 - 0.516796
hisQ SF2384 histidine transport system permease proteinchromosome CDS2433343 687 - 0.534207
hpaF SF4381 5-carboxymethyl-2-hydroxymuconatedelta-isomerasechromosome CDS4553113 381 - 0.496063
hpaX SF4378 putative 4-hydroxyphenylacetate permeasechromosome CDS4550051 1356 - 0.464602
ilvA SF3847 threonine deaminase (dehydratase)chromosome CDS3964774 1545 + 0.586408
ilvB SF3790 acetolactate synthase I, valine-sensitive, large subunitchromosome CDS3898737 1599 + 0.564728
ilvC SF3848 ketol-acid reductoisomerasechromosome CDS3967355 1476 + 0.53523
ilvD SF3846 dihydroxyacid dehydratasechromosome CDS3962921 1851 + 0.56456
ilvE SF3845 branched-chain amino-acid aminotransferasechromosome CDS3961927 930 + 0.544086
ilvG SF3843 acetolactate synthase II, large subunitchromosome CDS3960001 1647 + 0.545841
ilvH SF0073 acetolactate synthase III, small subunitchromosome CDS85198 492 + 0.502033
ilvI SF0072 acetolactate synthase III, large subunitchromosome CDS83387 1809 + 0.524599
ilvN SF3791 acetolactate synthase I, valine sensitive, small subunitchromosome CDS3900339 291 + 0.484536
imm SF3714 putative membrane transport proteinchromosome CDS3819521 1194 - 0.569514
kgtP SF2649 alpha-ketoglutarate permeasechromosome CDS2721489 1299 - 0.487298
ldcC SF0176 lysine decarboxylase 2chromosome CDS200623 2142 + 0.507937
leuA SF0069 2-isopropylmalate synthasechromosome CDS79800 1572 - 0.527354
leuB SF0068 3-isopropylmalate dehydrogenasechromosome CDS78709 1095 - 0.552511
leuC SF0067 3-isopropylmalate isomerase (dehydratase) subunitchromosome CDS77306 1401 - 0.553176
leuD SF0066 isopropylmalate isomerase subunitchromosome CDS76690 606 - 0.521452
livF SF3472 ATP-binding component of leucine transportchromosome CDS3563232 714 - 0.572829
livG SF3473 ATP-binding component of high-affinity branched-chain amino acid transport systemchromosome CDS3563947 768 - 0.539062
livH SF3475 high-affinity branched-chain amino acid transport protein, membrane componentchromosome CDS3565985 927 - 0.559871
livJ SF3478 high-affinity amino acid transport protein, periplasmic binding proteinchromosome CDS3569074 1161 - 0.536606
livK SF3476 high-affinity leucine-specific transport protein, periplasmic binding proteinchromosome CDS3566959 1110 - 0.544144
livM SF3474 high-affinity branched-chain amino acid transport protein, membrane componentchromosome CDS3564711 1278 - 0.562598
lysA SF2848 diaminopimelate decarboxylasechromosome CDS2937998 1263 - 0.528899
lysC SF4181 aspartokinase IIIchromosome CDS4356421 1350 + 0.543704
lysP SF2241 lysine-specific permeasechromosome CDS2269542 1470 - 0.531292
malY SF1647 cystathionine beta-lyase; maltose regulon modulatorchromosome CDS1677673 1173 + 0.512361
metB SF4017 cystathionine gamma-synthasechromosome CDS4143750 1161 + 0.549526
metC SF3053 cystathionine beta-lyase (beta-cystathionase)chromosome CDS3147677 1188 + 0.516835
metE SF3907 tetrahydropteroyltriglutamatemethyltransferasechromosome CDS4026194 2262 + 0.557471
metF SF4019 5,10-methylene-tetrahydrofolate reductasechromosome CDS4147694 891 + 0.523008
metH SF4085 B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylasechromosome CDS4241382 3684 + 0.557275
metJ SF4016 repressor of all met genes but metFchromosome CDS4143156 318 - 0.518868
metL SF4018 aspartokinase II and homoserine dehydrogenase IIchromosome CDS4144913 2433 + 0.581176
mtr SF3202 tryptophan-specific transport proteinchromosome CDS3296780 1245 - 0.53494
nanA SF3261 N-acetylneuraminate lyase (aldolase)chromosome CDS3358780 894 - 0.521253
nanT SF3260 sialic acid transporterchromosome CDS3357180 1521 - 0.552268
nikA SF3494 periplasmic binding protein for nickelchromosome CDS3584191 1575 + 0.533968
nikB SF3495 transport of nickel, membrane proteinchromosome CDS3585765 945 + 0.579894
nikC SF3496 transport of nickel, membrane proteinchromosome CDS3586706 834 + 0.603118
nikD SF3497 ATP-binding protein of nickel transport systemchromosome CDS3587539 765 + 0.59085
nikE SF3498 ATP-binding protein of nickel transport systemchromosome CDS3588300 807 + 0.557621
nupG SF2961 permease protein for nucleosideschromosome CDS3047765 1305 + 0.495785
oppA SF1244 periplasmic oligopeptide binding proteinchromosome CDS1296237 1632 + 0.479167
oppB SF1245 oligopeptide transport permease proteinchromosome CDS1297954 921 + 0.466884
oppC SF1246 oligopeptide transport permease proteinchromosome CDS1298889 909 + 0.529153
oppD SF1247 ATP-binding protein of oligopeptide ABC transport systemchromosome CDS1299809 1014 + 0.514793
oppF SF1248 ATP-binding protein of oligopeptide ABC transport systemchromosome CDS1300819 1005 + 0.518408
ordL SF1306 probable oxidoreductasechromosome CDS1358379 1281 + 0.576893
ospB CP0003 OspB, protein secreted by the Mxi-Spa secretion machinery, function unknownpCP301 CDS1176 867 + 0.32872
pabA SF3379 p-aminobenzoate synthetase, component IIchromosome CDS3459476 564 - 0.537234
pabB SF1416 p-aminobenzoate synthetase, component Ichromosome CDS1454127 1362 - 0.507342
pabC SF1100 4-amino-4-deoxychorismate lyasechromosome CDS1141015 810 + 0.506173
pdxB SF2396 erythronate-4-phosphate dehyrogenasechromosome CDS2444827 1137 - 0.53562
pepA SF4229 aminopeptidase A/Ichromosome CDS4401646 1512 + 0.546958
pepB SF2570 putative peptidasechromosome CDS2640229 1284 - 0.561526
pepD SF0285 aminoacyl-histidine dipeptidase (peptidase D)chromosome CDS302588 1458 - 0.514403
pepE SF4087 peptidase Echromosome CDS4247007 690 - 0.542029
pepN SF0929 aminopeptidase Nchromosome CDS975844 2616 + 0.534404
pepP SF2894 proline aminopeptidase P IIchromosome CDS2987429 1326 - 0.535445
pepQ SF3923 proline dipeptidasechromosome CDS4044112 1332 + 0.535285
pepT SF1129 putative peptidase Tchromosome CDS1172299 1227 + 0.493888
pheA SF2659 chorismate mutase-P and prephenate dehydratasechromosome CDS2736397 1161 + 0.490095
pheP SF0482 phenylalanine transport protein phePchromosome CDS500186 1377 + 0.527959
potA SF1128 ATP-binding component of spermidine/putrescine transportchromosome CDS1170913 1137 - 0.508355
potB SF1127 spermidine/putrescine transport system permeasechromosome CDS1170072 828 - 0.513285
potC SF1126 spermidine/putrescine transport system permeasechromosome CDS1169281 795 - 0.500629
potD SF1125 spermidine/putrescine periplasmic transport proteinchromosome CDS1168238 1047 - 0.512894
potE SF0604 putrescine transport proteinchromosome CDS635272 1320 + 0.503788
potF SF0808 periplasmic putrescine-binding protein; permease proteinchromosome CDS840540 1113 + 0.507637
potG SF0809 ATP-binding component of putrescine transport systemchromosome CDS841666 1215 + 0.557202
potH SF0810 putrescine transport protein; permeasechromosome CDS842890 954 + 0.506289
potI SF0811 putrescine transport protein; permeasechromosome CDS843840 846 + 0.553191
poxB SF0826 pyruvate oxidasechromosome CDS858567 1719 - 0.536358
prlC SF3529 oligopeptidase Achromosome CDS3618826 2043 - 0.552129
proA SF0293 gamma-glutamylphosphate reductasechromosome CDS309833 1254 + 0.543062
proB SF0292 gamma-glutamate kinasechromosome CDS308718 1104 + 0.557971
proC SF0322 pyrroline-5-carboxylate reductasechromosome CDS334078 810 - 0.548148
proP SF4112 low-affinity transport protein; proline permease IIchromosome CDS4276553 1503 - 0.499002
proV SF2705 glycine betaine/L-proline transport ATP-binding proteinchromosome CDS2778710 1203 + 0.489609
proW SF2706 glycine betaine/L-proline transport system permease proteinchromosome CDS2779905 1065 + 0.58216
proX SF2707 glycine betaine/L-proline transport system permease proteinchromosome CDS2781027 993 + 0.526687
proY SF0339 proline permease transport proteinchromosome CDS350494 1374 + 0.525473
prsA SF1210 phosphoribosylpyrophosphate synthetasechromosome CDS1257809 948 - 0.529536
ptrB SF1856 protease IIchromosome CDS1890651 2061 - 0.499272
rfc SF2097 O-antigen polymerasechromosome CDS2110960 1149 - 0.273281
sapA SF1299 peptide transport periplasmic proteinchromosome CDS1349739 1644 - 0.542579
sapD SF1296 putative ATP-binding protein of peptide transport systemchromosome CDS1346908 993 - 0.50856
sdaA SF1414 L-serine deaminasechromosome CDS1451997 1365 - 0.537729
sdaB SF2811 L-serine dehydratase (deaminase), L-SD2chromosome CDS2890013 1368 + 0.546053
sdaC SF2810 probable serine transporterchromosome CDS2888666 1290 + 0.523256
selA SF3629 selenocysteine synthase: L-seryl-tRNA (Ser) selenium transferasechromosome CDS3734155 1392 - 0.563937
selD SF1459 selenophosphate synthasechromosome CDS1494745 1044 + 0.552682
serA SF2898 D-3-phosphoglycerate dehydrogenasechromosome CDS2991484 1233 - 0.52717
serB SF4420 3-phosphoserine phosphatasechromosome CDS4590501 969 + 0.568627
serC SF0902 3-phosphoserine aminotransferasechromosome CDS940005 1089 + 0.503214
solA SF1066 sarcosine oxidase-like proteinchromosome CDS1107226 1119 - 0.524576
sorE SF4088 putative L-sorbose-1-P-reductasechromosome CDS4248078 1230 - 0.527642
speA SF2931 biosynthetic arginine decarboxylasechromosome CDS3022207 2007 - 0.538117
speB SF2927 agmatinasechromosome CDS3020025 921 - 0.555918
speC SF2962 ornithine decarboxylase isozymechromosome CDS3049118 2196 - 0.520036
speD SF0117 S-adenosylmethionine decarboxylasechromosome CDS133039 795 - 0.459119
speE SF0118 spermidine synthase, putrescine aminopropyltransferasechromosome CDS133849 867 - 0.509804
tdcB SF3157 threonine dehydratasechromosome CDS3256545 990 - 0.460606
tdcC SF3156 anaerobically inducible permease for L-threonine and L-serinechromosome CDS3255192 1332 - 0.496246
tdh SF3656 threonine dehydrogenasechromosome CDS3762792 1026 - 0.524366
thrA SF0002 aspartokinase I, homoserine dehydrogenase Ichromosome CDS336 2463 + 0.53309
thrB SF0003 homoserine kinasechromosome CDS2800 933 + 0.562701
thrC SF0004 threonine synthasechromosome CDS3733 1287 + 0.529915
tnaA SF3754 tryptophanasechromosome CDS3861838 1416 - 0.503531
tnaB SF3753 low-affinity tryptophan permeasechromosome CDS3860500 1248 - 0.465545
trpA SF1263 tryptophan synthase, alpha proteinchromosome CDS1312737 807 - 0.539033
trpB SF1264 tryptophan synthase, beta proteinchromosome CDS1313543 1194 - 0.546064
trpC SF1265 N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetasechromosome CDS1314748 1362 - 0.524229
trpD SF1266 anthranilate synthase component II, glutamine amidotransferase and phosphoribosylanthranilate transferasechromosome CDS1316110 1596 - 0.561404
trpE SF1267 anthranilate synthase component Ichromosome CDS1317705 1563 - 0.539987
tyrA SF2660 chorismate mutase-T and prephenate dehydrogenasechromosome CDS2737600 1122 - 0.520499
tyrB SF4151 tyrosine aminotransferasechromosome CDS4321475 1194 - 0.524288
tyrP SF1953 tyrosine-specific transport proteinchromosome CDS1985964 1212 + 0.509076
tyrR SF1329 regulatory protein TyrRchromosome CDS1381601 1542 + 0.520104
usg SF2395 putative PTS system enzyme II A componentchromosome CDS2443748 1014 - 0.554241
wcaB SF2122 putative transferasechromosome CDS2137427 489 - 0.550102
xasA SF1735 acid sensitivity protein, putative transporterchromosome CDS1771818 1536 + 0.483073
xylE SF4174 xylose-proton symportorchromosome CDS4347436 1476 + 0.485772
yaaU SF0042 putative transport proteinchromosome CDS45123 1395 + 0.522581
yabM SF0065 putative transport proteinchromosome CDS75463 1179 + 0.480916
yaeD SF0191 putative phosphatasechromosome CDS213730 576 + 0.501736
yaeR SF0177 orf, conserved hypothetical proteinchromosome CDS202794 417 + 0.508393
ybaS SF0430 putative glutaminasechromosome CDS447961 933 + 0.533762
ybaT SF0431 putative amino acid/amine transport proteinchromosome CDS448896 1293 + 0.531322
ybdA SF0505 hypothetical membrane proteinchromosome CDS525764 1233 + 0.570965
ybdL SF0515 putative aminotransferasechromosome CDS536948 1161 + 0.537468
ybdR SF0527 putative oxidoreductasechromosome CDS547935 1239 + 0.504439
ybeJ SF0626 putative periplasmic binding transport proteinchromosome CDS662773 909 + 0.487349
ybgH SF0588 putative transport proteinchromosome CDS614519 1482 + 0.523617
ybgJ SF0586 putative carboxylasechromosome CDS612826 657 - 0.572298
ybiB SF0750 putative enzymechromosome CDS777873 963 + 0.550363
ybiK SF0778 putative asparaginasechromosome CDS810731 966 + 0.564182
ybjM SF0801 orf, conserved hypothetical proteinchromosome CDS835506 378 + 0.489418
ybjP SF0819 putative enzymechromosome CDS850685 516 - 0.540698
ybjU SF0825 putative arylsulfatasechromosome CDS857529 1002 - 0.56487
ycaD SF0857 putative transport proteinchromosome CDS897207 1149 + 0.517842
ycdX SF1028 orf, conserved hypothetical proteinchromosome CDS1073760 738 + 0.48103
ycdZ SF1030 orf, conserved hypothetical proteinchromosome CDS1075147 522 + 0.542146
yceL SF1071 orf, conserved hypothetical proteinchromosome CDS1111879 1209 - 0.55335
ycjJ SF1301 putative amino acid/amine transport proteinchromosome CDS1352074 1386 - 0.535354
ycjQ SF1319 putative oxidoreductasechromosome CDS1369864 1053 + 0.557455
yddG SF1752 orf, conserved hypothetical proteinchromosome CDS1790135 882 + 0.497732
ydeD SF1561 orf, conserved hypothetical proteinchromosome CDS1594692 801 + 0.498127
ydeF SF1560 putative transport proteinchromosome CDS1593211 1119 - 0.495085
ydgR SF1659 putative transport proteinchromosome CDS1689487 1503 + 0.511643
ydhC SF1688 putative transport proteinchromosome CDS1719638 1212 + 0.531353
ydiB SF1722 putative oxidoreductasechromosome CDS1756657 867 + 0.476355
ydjE SF1454 putative transport proteinchromosome CDS1488774 1359 + 0.452539
ydjS SF1482 orf, conserved hypothetical proteinchromosome CDS1518624 873 + 0.537228
yecC SF1960 putative ATP-binding component of a transport systemchromosome CDS1993208 753 - 0.545817
yecS SF1961 putative transport system permease protein (former yecC)chromosome CDS1993957 669 - 0.533632
yedA SF2003 putative transmembrane subunitchromosome CDS2029406 921 + 0.536373
yedO SF1962 putative 1-aminocyclopropane-1-carboxylate deaminasechromosome CDS1994640 1083 - 0.529086
yeeF SF2073 putative amino acid/amine transport proteinchromosome CDS2091274 1359 - 0.529065
yegB SF2142 putative transport proteinchromosome CDS2168246 1416 + 0.554379
yehW SF2213 putative transport system permease proteinchromosome CDS2238541 732 - 0.564208
yehX SF2214 putative ATP-binding component of a transport systemchromosome CDS2239277 927 - 0.558792
yehY SF2215 putative transport system permease proteinchromosome CDS2240196 1158 - 0.570812
yeiO SF2255 putative transportchromosome CDS2286290 1179 + 0.53011
yejA SF2264 orf, conserved hypothetical proteinchromosome CDS2295567 1815 + 0.506336
yffG SF2510 putative oxidoreductase, Fe-S subunitchromosome CDS2571549 1980 - 0.55505
yfhB SF2607 orf, conserved hypothetical proteinchromosome CDS2682787 573 - 0.532286
yfhO SF2577 putative aminotransferasechromosome CDS2645352 1215 - 0.53251
yfiK SF2640 orf, conserved hypothetical proteinchromosome CDS2712464 588 + 0.511905
ygcS SF2787 putative transport proteinchromosome CDS2860556 1410 - 0.529078
ygeD SF2845 putative resistance proteinschromosome CDS2933032 1191 - 0.557515
ygfD SF2903 putative nucleotide-binding proteinchromosome CDS2997248 996 + 0.539157
ygiC SF3078 putative synthetase/amidasechromosome CDS3173557 1161 + 0.504737
ygjG SF3114 probable ornithine aminotransferasechromosome CDS3210029 1290 + 0.550388
ygjI SF3118 putative oxidoreductasechromosome CDS3216670 1434 + 0.498605
ygjU SF3129 putative transport proteinchromosome CDS3230378 1245 + 0.548594
ygjV SF3130 orf, conserved hypothetical proteinchromosome CDS3231627 552 - 0.5
yhaO SF3151 putative transport system permease proteinchromosome CDS3248185 1332 - 0.501502
yhaU SF3164 putative transport proteinchromosome CDS3265067 1335 - 0.506367
yhbE SF3224 orf, conserved hypothetical proteinchromosome CDS3323953 966 - 0.526915
yhdW SF3304 putative periplasmic binding transport proteinchromosome CDS3401320 1026 + 0.493177
yhdW SF3520 putative periplasmic binding transport proteinchromosome CDS3609890 918 - 0.489107
yhdY SF3309 putative transport system permease proteinchromosome CDS3404369 1104 + 0.51721
yhdZ SF3310 putative ATP-binding component of a transport systemchromosome CDS3405480 759 + 0.467721
yhfC SF3383 putative transport proteinchromosome CDS3461787 1182 + 0.51269
yhfX SF3399 orf, conserved hypothetical proteinchromosome CDS3479041 1164 - 0.541237
yhhK SF3477 orf, conserved hypothetical proteinchromosome CDS3568492 384 + 0.559896
yhhS SF3491 putative transportchromosome CDS3581038 1260 - 0.55873
yhjE SF3555 putative transport proteinchromosome CDS3644946 1323 + 0.560091
yhjV SF3574 putative transporter proteinchromosome CDS3671626 1272 + 0.449686
yhjX SF3581 putative resistance proteinchromosome CDS3681863 1209 - 0.514475
yidG SF3787 orf, conserved hypothetical proteinchromosome CDS3896760 363 + 0.506887
yidR SF3774 orf, conserved hypothetical proteinchromosome CDS3883444 1275 + 0.536471
yidY SF3752 putative transport proteinchromosome CDS3859193 1176 - 0.529762
yieO SF3837 putative transport proteinchromosome CDS3948666 1404 - 0.49359
yifK SF3870 putative amino acid/amine transport proteinchromosome CDS3989452 1254 + 0.541467
yigJ SF3901 orf, conserved hypothetical proteinchromosome CDS4021151 369 + 0.509485
yigK SF3902 orf, conserved hypothetical proteinchromosome CDS4021581 417 - 0.503597
yigM SF3905 orf, conserved hypothetical proteinchromosome CDS4024218 900 + 0.548889
yihN SF3944 putative resistance proteinchromosome CDS4074823 1059 + 0.448536
yjdE SF4108 putative amino acid/amine transport proteinchromosome CDS4271526 1338 + 0.543348
yjeH SF4295 putative transport proteinchromosome CDS4472776 1257 - 0.513922
yjeK SF4302 orf, conserved hypothetical proteinchromosome CDS4479016 1029 - 0.531584
yjfC SF4339 putative synthetase/amidasechromosome CDS4516530 1164 + 0.532646
yjiZ SF4387 putative transport proteinchromosome CDS4559658 1362 - 0.517621
ylbB SF0450 putative hydantoin utilization proteinchromosome CDS467141 1158 - 0.515544
yneH SF1569 putative glutaminasechromosome CDS1601046 927 + 0.517799
yphC SF2592 putative oxidoreductasechromosome CDS2659573 1095 - 0.540639
ytfF SF4276 putative transmembrane subunitchromosome CDS4454923 966 + 0.554865