Gene list
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COG category: Amino acid transport and metabolism
Organism: Lactobacillus acidophilus NCFM, NCFM
Number of genes found: 165
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Lactobacillus acidophilus NCFM, NCFM | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | LBA0251 | multidrug resistance protein | chromosome | CDS | 246043 | 561 | + | 0.392157 |
NA | LBA0911 | aminopeptidase | chromosome | CDS | 888539 | 1314 | + | 0.328767 |
NA | LBA1087 | cysteine synthase | chromosome | CDS | 1066782 | 588 | + | 0.345238 |
NA | LBA0044 | putative esterase | chromosome | CDS | 39161 | 573 | + | 0.314136 |
NA | LBA1810 | hypothetical protein | chromosome | CDS | 1824509 | 1197 | - | 0.345865 |
NA | LBA1046 | glutamine ABC transporter substrate-binding protein | chromosome | CDS | 1032349 | 861 | + | 0.343786 |
NA | LBA0899 | putative transporter protein | chromosome | CDS | 874233 | 1392 | + | 0.356322 |
NA | LBA0262 | aa transporter | chromosome | CDS | 251738 | 1593 | + | 0.349027 |
NA | LBA0471 | hypothetical protein | chromosome | CDS | 460761 | 405 | + | 0.316049 |
NA | LBA0937 | aromatic amino acid transferase | chromosome | CDS | 912082 | 1185 | - | 0.345992 |
NA | LBA1887 | predicted permease | chromosome | CDS | 1898549 | 903 | - | 0.3732 |
NA | LBA1042 | glutamine ABC transporter membrane spanning permease | chromosome | CDS | 1030272 | 660 | + | 0.35303 |
NA | LBA1572 | arginase | chromosome | CDS | 1565620 | 873 | - | 0.309278 |
NA | LBA0235 | dipeptidase | chromosome | CDS | 232590 | 585 | - | 0.415385 |
NA | LBA1003 | homocysteine S-methyltransferase | chromosome | CDS | 981040 | 933 | + | 0.334405 |
NA | LBA0744 | plp-dependent aminotransferase | chromosome | CDS | 730955 | 204 | + | 0.29902 |
NA | LBA1853 | multidrug resistance efflux pump | chromosome | CDS | 1864533 | 570 | + | 0.391228 |
NA | LBA1621 | multidrug transporter | chromosome | CDS | 1623774 | 1458 | - | 0.341564 |
NA | LBA1292 | aa transporter | chromosome | CDS | 1269220 | 1428 | + | 0.392857 |
NA | LBA1212 | homoserine dehydrogenase Hdh | chromosome | CDS | 1186755 | 1233 | - | 0.334955 |
NA | LBA0252 | multidrug resistance protein | chromosome | CDS | 246763 | 354 | + | 0.350282 |
NA | LBA1809 | hypothetical protein | chromosome | CDS | 1823731 | 792 | - | 0.333333 |
NA | LBA0164 | multidrug resistance protein | chromosome | CDS | 157716 | 1218 | + | 0.357964 |
NA | LBA1646 | dipeptidase | chromosome | CDS | 1666543 | 1428 | - | 0.379552 |
NA | LBA0112 | putative glutamine ABC transporter | chromosome | CDS | 108280 | 1614 | - | 0.363073 |
NA | LBA1698 | putative prophage related protein | chromosome | CDS | 1720222 | 1065 | - | 0.338028 |
NA | LBA0995 | amino acid permease | chromosome | CDS | 968370 | 1473 | - | 0.367278 |
NA | LBA0460 | amino acid permease | chromosome | CDS | 444247 | 1374 | - | 0.336245 |
NA | LBA1884 | predicted permease | chromosome | CDS | 1896640 | 921 | - | 0.368078 |
NA | LBA0615 | amino acid permease | chromosome | CDS | 601984 | 1305 | - | 0.338697 |
NA | LBA0131 | ribose-p pyrokinase | chromosome | CDS | 124218 | 987 | + | 0.378926 |
NA | LBA1446 | multidrug resistance protein | chromosome | CDS | 1432036 | 1473 | + | 0.39036 |
NA | LBA1135 | putative macrolide efflux protein | chromosome | CDS | 1112209 | 1218 | + | 0.320197 |
NA | LBA0696 | amino acid permease | chromosome | CDS | 689816 | 1437 | - | 0.361865 |
NA | LBA1790 | hypothetical protein | chromosome | CDS | 1812517 | 183 | - | 0.360656 |
NA | LBA0567 | multidrug resistance efflux pump | chromosome | CDS | 552413 | 1206 | - | 0.378939 |
NA | LBA0236 | dipeptidase | chromosome | CDS | 233171 | 843 | - | 0.428232 |
NA | LBA1885 | predicted permease | chromosome | CDS | 1897541 | 930 | - | 0.368817 |
NA | LBA0943 | cationic amino acid transporter | chromosome | CDS | 917693 | 1197 | - | 0.332498 |
NA | LBA1837 | cytosol non-specific dipeptidase | chromosome | CDS | 1849264 | 1413 | + | 0.372258 |
NA | LBA1786 | hypothetical protein | chromosome | CDS | 1810966 | 423 | - | 0.373522 |
NA | LBA1854 | multidrug resistance efflux pump | chromosome | CDS | 1865102 | 675 | + | 0.38963 |
NA | LBA0343 | aminopeptidase C | chromosome | CDS | 324213 | 1350 | - | 0.375556 |
NA | LBA1149 | carbamoyl-phosphate synthase large subunit | chromosome | CDS | 1122937 | 3186 | - | 0.318267 |
NA | LBA1062 | putative multidrug efflux permease | chromosome | CDS | 1044707 | 522 | + | 0.254789 |
NA | LBA0743 | plp-dependent aminotransferase | chromosome | CDS | 730077 | 906 | + | 0.345475 |
NA | LBA1150 | carbamoyl-phosphate synthase small subunit | chromosome | CDS | 1126126 | 1056 | - | 0.325758 |
NA | LBA0566 | multidrug transporter | chromosome | CDS | 550975 | 1416 | + | 0.385593 |
NA | LBA1089 | cystathionine beta-lyase | chromosome | CDS | 1067895 | 258 | + | 0.352713 |
NA | LBA1036 | putative branched-chain amino acid transporter | chromosome | CDS | 1025439 | 1371 | + | 0.388038 |
NA | LBA0035 | cytosol non-specific dipeptidase | chromosome | CDS | 30348 | 1401 | + | 0.390435 |
NA | LBA1115 | amino acid permease | chromosome | CDS | 1091689 | 1371 | + | 0.334063 |
NA | LBA0242 | hypothetical protein | chromosome | CDS | 237782 | 771 | - | 0.380026 |
NA | LBA1281 | putative acyl-CoA thioesterase | chromosome | CDS | 1260047 | 759 | - | 0.309618 |
NA | LBA1177 | iron-sulfur cofactor synthesis protein | chromosome | CDS | 1157836 | 1152 | - | 0.362847 |
NA | LBA1216 | pheromone-peptide binding protein | chromosome | CDS | 1191343 | 1626 | - | 0.342558 |
NA | LBA0878 | hypothetical protein | chromosome | CDS | 856155 | 507 | + | 0.252465 |
NA | LBA1116 | pyrroline-5-carboxylate reductase | chromosome | CDS | 1093464 | 276 | - | 0.391304 |
NA | LBA1765 | hypothetical protein | chromosome | CDS | 1796197 | 282 | + | 0.351064 |
NA | LBA1086 | amino acid permease | chromosome | CDS | 1064917 | 1326 | - | 0.344646 |
NA | LBA1045 | glutamine ABC transporter ATP-binding protein | chromosome | CDS | 1031595 | 741 | + | 0.364372 |
NA | LBA1053 | membrane protein | chromosome | CDS | 1038262 | 1194 | - | 0.378559 |
NA | LBA1061 | putative phosphate transporter related protein | chromosome | CDS | 1044028 | 597 | + | 0.313233 |
NA | LBA1672 | amino acid ABC transporter | chromosome | CDS | 1693035 | 819 | - | 0.324786 |
NA | LBA0996 | ornithine decarboxylase chain A | chromosome | CDS | 970080 | 2094 | + | 0.37106 |
NA | LBA1429 | putative transporter-membrane protein | chromosome | CDS | 1415546 | 1179 | - | 0.35369 |
NA | LBA1695 | aspartate aminotransferase | chromosome | CDS | 1715789 | 1599 | + | 0.332083 |
NA | LBA1022 | arginase | chromosome | CDS | 1014419 | 864 | + | 0.31713 |
NA | LBA0850 | aspartokinase-homoserinedehydrogenase | chromosome | CDS | 833122 | 1356 | - | 0.324484 |
NA | LBA1114 | alcohol dehydrogenase | chromosome | CDS | 1090777 | 450 | + | 0.404444 |
NA | LBA1044 | ABC transporter | chromosome | CDS | 1030912 | 675 | + | 0.328889 |
NA | LBA0404 | hypothetical protein | chromosome | CDS | 378472 | 759 | + | 0.320158 |
NA | LBA1224 | branched-chain amino acid ABC transporter | chromosome | CDS | 1200741 | 879 | + | 0.332196 |
NA | LBA0552 | multidrug transporter | chromosome | CDS | 539332 | 1467 | + | 0.365371 |
NA | LBA1238 | cysteine synthase | chromosome | CDS | 1213642 | 930 | + | 0.37957 |
NA | LBA1088 | cysteine synthase | chromosome | CDS | 1067603 | 111 | + | 0.351351 |
NA | LBA1567 | aminopeptidase | chromosome | CDS | 1559971 | 1518 | + | 0.346509 |
NA | LBA1674 | amino acid ABC transporter permease protein | chromosome | CDS | 1694491 | 648 | - | 0.327161 |
NA | LBA1902 | amino acid permease | chromosome | CDS | 1910476 | 1392 | - | 0.371408 |
NA | LBA0924 | putative transporter protein | chromosome | CDS | 900867 | 333 | - | 0.333333 |
NA | LBA0857 | aspartate-semialdehyde dehydrogenase | chromosome | CDS | 841052 | 1059 | + | 0.356941 |
NA | LBA1471 | putative multidrug efflux permease | chromosome | CDS | 1455574 | 1224 | - | 0.321895 |
NA | LBA1215 | aspartokinase | chromosome | CDS | 1189610 | 1362 | + | 0.34141 |
NA | LBA1424 | amino acid permease | chromosome | CDS | 1410894 | 1497 | - | 0.366733 |
NA | LBA1222 | branched-chain amino acid permease | chromosome | CDS | 1200259 | 438 | + | 0.344749 |
NA | LBA0039 | hypothetical protein | chromosome | CDS | 34699 | 525 | - | 0.318095 |
NA | LBA0111 | putative glutamate ATP binding protein | chromosome | CDS | 107525 | 756 | - | 0.376984 |
NA | LBA0543 | hypothetical protein | chromosome | CDS | 532593 | 543 | + | 0.355433 |
NA | LBA1345 | putative oligopeptide ABC transporter substrate bindingprotein | chromosome | CDS | 1319728 | 270 | - | 0.325926 |
NA | LBA0856 | aspartate aminotransferase | chromosome | CDS | 839877 | 1176 | + | 0.348639 |
NA | LBA0253 | putative multidrug resistance protein | chromosome | CDS | 247165 | 261 | + | 0.37931 |
NA | LBA1670 | arylesterase | chromosome | CDS | 1692023 | 561 | + | 0.340463 |
NA | LBA0396 | oxalyl-CoA decarboxylase | chromosome | CDS | 367973 | 1710 | - | 0.40117 |
NA | LBA0854 | dihydrodipicolinate synthase | chromosome | CDS | 838154 | 936 | + | 0.353632 |
NA | LBA1294 | dipeptidase | chromosome | CDS | 1271184 | 1422 | - | 0.363572 |
NA | LBA0729 | amino acid permease | chromosome | CDS | 718756 | 1626 | - | 0.370234 |
NA | LBA0753 | multi-drug-type permease | chromosome | CDS | 740476 | 1389 | + | 0.327574 |
NA | LBA0173 | putative membrane protein | chromosome | CDS | 168378 | 1122 | - | 0.28164 |
NA | LBA0430 | xaa-pro dipeptidase | chromosome | CDS | 404158 | 1107 | - | 0.376694 |
NA | LBA0045 | sugar transporter | chromosome | CDS | 40163 | 1353 | + | 0.351072 |
aapA | LBA1905 | amino acid permease | chromosome | CDS | 1914245 | 1350 | - | 0.345185 |
ansA | LBA1687 | l-asparaginase | chromosome | CDS | 1708202 | 993 | - | 0.376636 |
asnA | LBA1896 | aspartate-ammonia ligase | chromosome | CDS | 1906426 | 1011 | + | 0.373887 |
asnH | LBA0158 | asn synthetase | chromosome | CDS | 149468 | 1950 | + | 0.371795 |
carA | LBA1380 | carbamoyl-phosphate synthase, small subunit | chromosome | CDS | 1359389 | 1086 | - | 0.38582 |
carB | LBA1379 | carbamoyl-phosphate synthase, large subunit (glutamine-hydrolyzing) | chromosome | CDS | 1356208 | 3189 | - | 0.389777 |
dapB | LBA0855 | dihydrodipicolinate reductase | chromosome | CDS | 839076 | 786 | + | 0.352417 |
dapD | LBA0852 | tetrahydrodipicolinate succinylase | chromosome | CDS | 836284 | 711 | + | 0.345992 |
dapF | LBA0849 | diaminopimelate epimerase | chromosome | CDS | 832106 | 1005 | - | 0.333333 |
dtpT | LBA1848 | di-tripeptide transporter | chromosome | CDS | 1858544 | 1494 | - | 0.388889 |
gadC | LBA0057 | glutamategamma-aminobutyrate antiporter | chromosome | CDS | 52583 | 1443 | + | 0.359667 |
glnA | LBA1501 | glutamine synthetase | chromosome | CDS | 1491502 | 1338 | - | 0.390882 |
glnH | LBA0572 | glutamine ABC transporter | chromosome | CDS | 558435 | 819 | - | 0.351648 |
glnH | LBA0579 | glutamine-binding protein precursor | chromosome | CDS | 566232 | 819 | + | 0.357753 |
glnM | LBA0581 | glutamine ABC transporter permease | chromosome | CDS | 567050 | 642 | + | 0.366044 |
glnP | LBA0582 | glutamine ABC transporter (membrane protein) | chromosome | CDS | 567706 | 657 | + | 0.366819 |
glnP | LBA0134 | glutamine ABC transporter permease protein | chromosome | CDS | 127010 | 1476 | + | 0.349593 |
glnQ | LBA0578 | glutamine ABC transporter ATP-binding protein | chromosome | CDS | 565478 | 741 | + | 0.34278 |
glnQ | LBA0135 | glutamine ABC transporter ATP-binding protein | chromosome | CDS | 128478 | 738 | + | 0.367209 |
glnQ | LBA1673 | glutamine ABC transporter | chromosome | CDS | 1693857 | 621 | - | 0.347826 |
glyA | LBA0261 | serine hydroxymethyltransferase | chromosome | CDS | 250411 | 1236 | + | 0.381877 |
ilvE | LBA1341 | branched-chain amino acid aminotransferase | chromosome | CDS | 1317137 | 1026 | + | 0.358674 |
lmrB | LBA1494 | lincomycin-resistance protein | chromosome | CDS | 1482356 | 1410 | - | 0.370213 |
lysA | LBA0851 | diaminopimelate decarboxylase | chromosome | CDS | 834956 | 1308 | + | 0.357034 |
metA | LBA1237 | homoserine O-succinyltransferase | chromosome | CDS | 1212841 | 789 | + | 0.325729 |
metC | LBA1090 | cystathionine beta-lyase | chromosome | CDS | 1068234 | 807 | + | 0.33829 |
metK | LBA1080 | putative methionine synthase | chromosome | CDS | 1060640 | 1119 | + | 0.380697 |
nifS | LBA0789 | aminotransferase | chromosome | CDS | 771825 | 1161 | + | 0.36348 |
oppA | LBA1400 | oligopeptide ABC trasporter substrate binding protein | chromosome | CDS | 1390333 | 1746 | - | 0.363688 |
oppA | LBA1347 | peptide binding protein | chromosome | CDS | 1320687 | 555 | - | 0.353153 |
oppA | LBA0198 | peptide binding protein | chromosome | CDS | 192993 | 1629 | + | 0.356661 |
oppA | LBA1665 | oligopeptide ABC transporter substrate binding protein | chromosome | CDS | 1687265 | 1641 | - | 0.361974 |
oppA | LBA1300 | oligopeptide ABC trasporter substrate binding protein | chromosome | CDS | 1279792 | 1758 | - | 0.359499 |
oppA | LBA1958 | oligopeptide ABC transporter substrate binding protein | chromosome | CDS | 1970272 | 1626 | + | 0.357319 |
oppA | LBA0197 | oligopeptide binding protein | chromosome | CDS | 191288 | 1626 | + | 0.376384 |
oppA | LBA1961 | oligopeptide ABC transporter substrate binding protein | chromosome | CDS | 1974133 | 1629 | + | 0.367096 |
oppA | LBA1346 | oligopeptide ABC transporter substrate binding protein | chromosome | CDS | 1319991 | 372 | - | 0.319892 |
oppA | LBA1301 | oligopeptide ABC trasporter substrate binding protein | chromosome | CDS | 1281751 | 1770 | - | 0.378531 |
oppB | LBA1303 | oligopeptide transport protein | chromosome | CDS | 1284676 | 960 | - | 0.360417 |
oppB | LBA0200 | permease protein | chromosome | CDS | 196073 | 930 | + | 0.387097 |
oppC | LBA0201 | permease protein ( oligopeptide ABC transporter) | chromosome | CDS | 197010 | 1032 | + | 0.381783 |
oppC | LBA1302 | oligopeptide ABC transporter permease protein | chromosome | CDS | 1283732 | 930 | - | 0.35914 |
oppD | LBA0202 | ATP binding protein | chromosome | CDS | 198057 | 1059 | + | 0.375826 |
oppD | LBA1306 | oligopeptide ABC transporter ATP-binding protein | chromosome | CDS | 1286628 | 1032 | - | 0.379845 |
oppF | LBA1305 | oligopeptide ABC transporter (ATP-binding protein) | chromosome | CDS | 1285638 | 987 | - | 0.368794 |
oppF | LBA0203 | ATP binding protein ( oligopeptide ABC transporter ) | chromosome | CDS | 199136 | 945 | + | 0.378836 |
pepD | LBA0994 | aminoacyl-histidine dipeptidase | chromosome | CDS | 966847 | 1404 | - | 0.367521 |
pepE | LBA0204 | aminopeptidase E | chromosome | CDS | 200133 | 1317 | - | 0.389522 |
pepF | LBA1763 | oligopeptidase | chromosome | CDS | 1794324 | 1797 | + | 0.378408 |
pepG | LBA0195 | aminopeptidase G | chromosome | CDS | 189152 | 1314 | + | 0.355403 |
pepN | LBA1849 | aminopeptidase N | chromosome | CDS | 1860149 | 2535 | - | 0.386193 |
pepP | LBA1336 | X-Pro dipeptidase | chromosome | CDS | 1312689 | 1110 | - | 0.357658 |
pepT | LBA1190 | amino tripeptidase T | chromosome | CDS | 1167016 | 1248 | - | 0.357372 |
pepT | LBA1515 | peptidase T | chromosome | CDS | 1509398 | 1284 | - | 0.352025 |
potA | LBA0709 | spermidine and putrescine ABC transporter ATP-binding protein | chromosome | CDS | 701708 | 1098 | + | 0.342441 |
potB | LBA0711 | spermidine-putrescine ABC transporter permease protein | chromosome | CDS | 702795 | 813 | + | 0.305043 |
potC | LBA0712 | spermidine and putrescine ABC transporter permease protein | chromosome | CDS | 703604 | 816 | + | 0.324755 |
potD | LBA0713 | spermidine and putrescine periplasmatic ABC transporter | chromosome | CDS | 704416 | 1074 | + | 0.309125 |
poxB | LBA1974 | pyruvate oxidase | chromosome | CDS | 1986109 | 1806 | - | 0.400886 |
prsA | LBA0224 | ribose-p-pyrophosphokinase | chromosome | CDS | 220709 | 975 | + | 0.388718 |
sdhA | LBA1398 | L-serine dehydratase, alpha subunit | chromosome | CDS | 1388814 | 882 | + | 0.441043 |
sdhB | LBA1397 | L-serine dehydratase, beta subunit | chromosome | CDS | 1388138 | 663 | + | 0.377074 |
thrB | LBA1211 | homoserine kinase | chromosome | CDS | 1185867 | 864 | - | 0.387731 |
thrC | LBA1214 | threonine synthase | chromosome | CDS | 1188103 | 1491 | + | 0.337357 |
yifK | LBA1904 | amino acid permease | chromosome | CDS | 1912828 | 1374 | - | 0.355167 |