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2024-05-07 19:26:59

Gene list

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COG category: Amino acid transport and metabolism
Organism: Synechococcus sp. WH 8102, WH8102

Number of genes found: 178

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Synechococcus sp. WH 8102, WH8102
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SYNW0323 putative peptidasechromosome CDS320020 1923 - 0.649506
NA SYNW2058 Prephenate dehydrogenasechromosome CDS1954971 876 - 0.660959
NA SYNW1883 putative SMR family transporter, possible pecM homologuechromosome CDS1798324 930 - 0.627957
NA SYNW1426 conserved hypothetical proteinchromosome CDS1395399 483 - 0.569358
NA SYNW0842 ABC transporter for amino acids, membrane componentchromosome CDS814789 975 + 0.647179
NA SYNW2452 putative N-carbamoyl-L-amino-acid hydrolasechromosome CDS2355136 1317 - 0.60896
NA SYNW2506 conserved hypothetical proteinchromosome CDS2411033 1008 + 0.630952
NA SYNW1542 possible ATP phosphoribosyltransferasechromosome CDS1485802 654 - 0.652905
NA SYNW2361 hypotheticalchromosome CDS2267558 390 + 0.676923
NA SYNW1789 probable carboxypeptidasechromosome CDS1717765 1515 - 0.646865
NA SYNW1347 hypotheticalchromosome CDS1339766 312 + 0.580128
NA SYNW2514 conserved hypothetical proteinchromosome CDS2418668 252 - 0.626984
NA SYNW1932 possible ring-cleaving dioxygenasechromosome CDS1837051 459 - 0.603486
NA SYNW1166 conserved hypothetical proteinchromosome CDS1158947 357 - 0.616247
NA SYNW1922 putative aspartoacylasechromosome CDS1827116 912 - 0.645833
NA SYNW0322 putative cysteine desulfurase or selenocysteine lyasechromosome CDS318704 1281 + 0.625293
NA SYNW0316 conserved hypothetical proteinchromosome CDS313752 360 - 0.616667
NA SYNW1167 conserved hypothetical proteinchromosome CDS1159334 288 - 0.677083
NA SYNW0190 conserved hypothetical proteinchromosome CDS189956 2025 - 0.667161
NA SYNW1276 histidyl-tRNA synthetase paralogchromosome CDS1275177 1245 + 0.627309
NA SYNW0562 Leucine aminopeptidasechromosome CDS552171 1464 - 0.666667
NA SYNW1077 Pyridoxal-dependent decarboxylase family proteinchromosome CDS1064615 1407 + 0.643923
NA SYNW1037 putative membrane proteinchromosome CDS1033670 849 - 0.61013
NA SYNW2458 possible transglutaminase-like enzymechromosome CDS2364168 900 + 0.62
NA SYNW0040 conserved hypothetical proteinchromosome CDS39293 426 - 0.610329
NA SYNW1917 ABC transporter binding protein, glycine betaine/proline familychromosome CDS1823321 966 + 0.628364
NA SYNW2195 putative multidrug efflux MFS transporterchromosome CDS2093925 1230 + 0.641463
NA SYNW0436 putative cyclase hisFchromosome CDS440064 810 + 0.375309
NA SYNW1779 conserved hypothetical proteinchromosome CDS1707238 537 + 0.58473
NA SYNW1412 Putative agmatine ureohydrolasechromosome CDS1383888 1281 + 0.636222
NA SYNW0674 possible cystathionine gamma-synthasechromosome CDS658580 1452 - 0.657713
NA SYNW0664 multidrug efflux transporter, MFS familychromosome CDS648339 1407 - 0.651741
NA SYNW1915 ABC transporter superfamily for glycine betaine/proline, ATP bindingchromosome CDS1821409 1005 + 0.618905
NA SYNW1916 ABC transporter, glycine betaine/proline family, membrane componentchromosome CDS1822410 915 + 0.625137
NA SYNW1394 putative gamma-glutamyltranspeptidasechromosome CDS1371294 1755 + 0.697436
NA SYNW0231 hypotheticalchromosome CDS230922 348 - 0.643678
NA SYNW2455 sodium:solute transporter family, possible urea transporterchromosome CDS2359990 1431 - 0.624039
NA SYNW0767 possible ligand gated channel (GIC family)chromosome CDS749149 1071 - 0.592904
NA SYNW0232 possible leucine dehydrogenasechromosome CDS231313 666 - 0.647147
NA SYNW2359 arginine decarboxylasechromosome CDS2262911 1935 + 0.611886
NA SYNW0250 conserved hypothetical proteinchromosome CDS251186 459 + 0.603486
NA SYNW2494 multidrug efflux transporter, MFS familychromosome CDS2395742 1299 + 0.635874
NA SYNW0287 conserved hypothetical proteinchromosome CDS286771 636 + 0.621069
NA SYNW0424 Possible HMGL-like family proteinchromosome CDS427233 1623 + 0.377696
NA SYNW0834 conserved hypothetical proteinchromosome CDS805320 978 + 0.630879
NA SYNW2291 NifS-like aminotransferase class-Vchromosome CDS2185139 1134 + 0.669312
NA SYNW2432 possible p-aminobenzoate synthetasechromosome CDS2336847 1287 + 0.677545
NA SYNW0607 possible ABC transporter, solute binding proteinchromosome CDS587252 384 - 0.580729
NA SYNW0841 ABC transporter for amino acids, membrane componentchromosome CDS813899 891 + 0.620651
NA SYNW0709 ABC transporter, substrate binding protein, possibly oligopeptideschromosome CDS695065 1590 - 0.618868
NA SYNW0619 Sodium:solute symporter family, possibly glucose transporterchromosome CDS603795 1764 + 0.628685
NA SYNW1591 conserved hypothetical proteinchromosome CDS1533881 486 - 0.658436
NA SYNW0835 probable oxidoreductasechromosome CDS806471 1644 + 0.64781
NA SYNW1469 hypotheticalchromosome CDS1420361 114 - 0.535088
NA SYNW1199 conserved hypothetical proteinchromosome CDS1190078 441 - 0.62585
NA SYNW1348 hypotheticalchromosome CDS1340139 432 + 0.532407
NA SYNW0840 ABC transporter, substrate binding protein for amino acidschromosome CDS812838 1062 + 0.613936
NA SYNW0109 conserved hypothetical proteinchromosome CDS109003 1239 + 0.648103
NA SYNW0706 possible multidrug efflux transporter, MFS familychromosome CDS691135 1302 - 0.619816
NA SYNW0828 Sodium:alanine symporter familychromosome CDS798285 1353 - 0.593496
NA SYNW2433 Aminotransferase class IVchromosome CDS2338130 840 + 0.652381
NA SYNW1531 conserved hypothetical proteinchromosome CDS1473833 1506 + 0.612218
NA SYNW0708 putative ABC transporter, oligopeptideschromosome CDS694046 1020 - 0.633333
NA SYNW0843 ABC transporter for amino acids, ATP binding componentchromosome CDS815760 741 + 0.618084
NA SYNW2422 arginase family proteinchromosome CDS2326206 861 + 0.634146
NA SYNW1683 putative ABC transporter, oligopeptideschromosome CDS1618691 906 - 0.644592
NA SYNW1877 aminotransferasechromosome CDS1792505 1179 - 0.614928
NA SYNW2267 conserved hypothetical proteinchromosome CDS2165692 894 - 0.61745
NA SYNW1128 conserved hypothetical proteinchromosome CDS1119559 843 - 0.659549
NA SYNW0452 hypotheticalchromosome CDS456975 930 + 0.321505
NA SYNW1689 putative L-cysteine/cystine lyasechromosome CDS1624939 1167 + 0.650386
NA SYNW2492 glutamine amidotransferase-phosphoribosyl anthranilate transferasechromosome CDS2394245 1071 + 0.61718
NA SYNW0800 multidrug efflux transporter, MFS familychromosome CDS776371 1254 + 0.598086
NA SYNW2050 putative S-adenosylmethionine decarboxylasechromosome CDS1948078 387 + 0.630491
NA SYNW2147 putative aminotransferasechromosome CDS2039052 1227 + 0.615322
DHSS SYNW0045 soluble hydrogenase small subunitchromosome CDS41347 1227 - 0.628362
PcyA SYNW1084 ferredoxin-dependent biliverdin reductasechromosome CDS1071661 744 + 0.612903
ald SYNW0501 alanine dehydrogenasechromosome CDS498405 1140 - 0.699123
argB SYNW1780 acetylglutamate kinasechromosome CDS1707767 882 + 0.631519
argC SYNW1262 N-acetyl-gamma-glutamyl-phosphate reductasechromosome CDS1259074 1074 - 0.620112
argD SYNW1634 putative N-acetylornithine aminotransferasechromosome CDS1571558 1263 + 0.640538
argF SYNW1586 ornithine carbamoyltransferasechromosome CDS1526632 957 - 0.619645
argG SYNW2513 Argininosuccinate synthasechromosome CDS2417457 1212 - 0.617987
argH SYNW0013 Fumarate lyase:Delta crystallinchromosome CDS15337 1416 + 0.58404
argJ SYNW2353 glutamate N-acetyltransferase / ornithine N-acetyltransferasechromosome CDS2256316 1230 - 0.630081
aroA SYNW1005 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)chromosome CDS1003147 1326 - 0.66365
aroB SYNW1310 3-dehydroquinate synthasechromosome CDS1305255 1116 + 0.641577
aroC SYNW0308 Chorismate synthasechromosome CDS305734 1092 - 0.647436
aroD SYNW1938 Dehydroquinase class IIchromosome CDS1842623 441 - 0.614512
aroE SYNW2509 Shikimate / quinate 5-dehydrogenasechromosome CDS2415218 870 + 0.632184
aroF SYNW2499 DAHP synthetase class Ichromosome CDS2401541 1068 - 0.615169
aroK SYNW2202 Shikimate kinasechromosome CDS2100725 576 + 0.625
asd SYNW0066 aspartate-semialdehyde dehydrogenasechromosome CDS62542 1059 + 0.638338
asnB SYNW2453 putative asparagine synthetase proteinchromosome CDS2356512 2025 - 0.598518
aspC SYNW1171 Aminotransferases class-Ichromosome CDS1162753 1179 - 0.63698
atp1, atpI SYNW0488 possible ATP synthase protein 1chromosome CDS489978 339 + 0.59587
cad SYNW0944 Orn/Lys/Arg decarboxylases family 1chromosome CDS904751 1407 - 0.686567
carA, pyrA SYNW1026 carbamoyl-phosphate synthase small chainchromosome CDS1022765 1152 + 0.632812
carB SYNW0830 carbamoyl phosphate synthetase, large subunitchromosome CDS800391 3324 - 0.616727
cysD SYNW0851 putative O-Acetyl homoserine sulfhydrylasechromosome CDS820938 1317 - 0.603645
cysE SYNW0090 serine acetyltransferasechromosome CDS91797 747 - 0.629183
cysH SYNW2164 Phosphoadenosine phosphosulfate reductasechromosome CDS2057243 765 - 0.626144
cysK1 SYNW0673 O-acetylserine (thiol)-lyase Achromosome CDS657491 987 - 0.629179
cysK2 SYNW2222 O-acetylserine (thiol)-lyase Achromosome CDS2115995 969 - 0.649123
dapA SYNW0067 dihydrodipicolinate synthasechromosome CDS63597 909 + 0.641364
dapB SYNW0819 dihydrodipicolinate reductasechromosome CDS788021 834 - 0.611511
dapF SYNW1254 diaminopimelate epimerasechromosome CDS1248550 1095 - 0.627397
futC,sfuC SYNW1544 ABC transporter, ATP binding component, possibly iron transporterchromosome CDS1487175 1161 - 0.641688
gcsH, gcvH SYNW2375 putative Glycine cleavage H-proteinchromosome CDS2284282 390 - 0.612821
gcvP SYNW2374 Glycine cleavage system P-proteinchromosome CDS2281347 2880 - 0.625
gcvT SYNW2425 putative Glycine cleavage T-protein (aminomethyl transferase)chromosome CDS2327908 1104 + 0.644022
glnA SYNW1073 Glutamine synthetase, glutamate--ammonia ligasechromosome CDS1060651 1422 - 0.59353
glnB SYNW0462 nitrogen regulatory protein P-IIchromosome CDS467913 339 - 0.554572
gloA SYNW2347 lactoylglutathione lyasechromosome CDS2249128 399 - 0.639098
glsF, gltS SYNW2132 Ferredoxin-dependent glutamate synthase, Fd-GOGATchromosome CDS2018953 4602 - 0.645372
gltS SYNW0882 Sodium/glutamate symporterchromosome CDS847605 1230 + 0.528455
glyA SYNW0259 serine hydroxymethyltransferase (SHMT)chromosome CDS258763 1290 + 0.622481
hisA SYNW0773 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerasechromosome CDS754862 768 + 0.653646
hisB SYNW0226 imidazoleglycerol-phosphate dehydratasechromosome CDS225247 609 + 0.619048
hisC SYNW2318 Aminotransferases class-Ichromosome CDS2218279 1119 - 0.633601
hisC/cobC SYNW2334 Aminotransferases class-Ichromosome CDS2236475 1077 - 0.634169
hisD SYNW0610 histidinol dehydrogenasechromosome CDS589602 1314 - 0.644597
hisF SYNW1675 Imidazole glycerol phosphate synthase subunit HisF (cyclase)chromosome CDS1611741 771 - 0.648508
hisH SYNW0723 Glutamine amidotransferase class-Ichromosome CDS705732 639 - 0.596244
hisH SYNW0435 putative glutamine amidotransferasechromosome CDS439439 633 + 0.339652
hisIE SYNW1505 histidine biosynthesis bifunctional protein HisIEchromosome CDS1456460 669 + 0.606876
ilvA SYNW1293 threonine dehydratasechromosome CDS1291313 1530 + 0.613072
ilvB SYNW1746 acetolactate synthasechromosome CDS1677032 1854 - 0.63754
ilvC SYNW1650 ketol-acid reductoisomerasechromosome CDS1587419 996 + 0.604418
ilvD SYNW1123 dihydroxyacid dehydratasechromosome CDS1115271 1674 - 0.633811
ilvE SYNW1239 putative branched-chain amino acid aminotransferasechromosome CDS1232555 915 - 0.590164
ilvN SYNW0680 Acetolactate synthase small subunitchromosome CDS665152 531 - 0.625235
kprS SYNW0966 Ribose-phosphate pyrophosphokinasechromosome CDS959492 996 + 0.614458
leuA SYNW0730 2-isopropylmalate synthasechromosome CDS714223 1623 + 0.597043
leuB SYNW0784 3-isopropylmalate dehydrogenasechromosome CDS764309 1074 + 0.643389
leuC SYNW0262 3-isopropylmalate dehydratase, large chainchromosome CDS262565 1419 + 0.636364
leuD SYNW0263 3-isopropylmalate dehydratase small subunitchromosome CDS263983 615 + 0.614634
lysA SYNW0936 diaminopimelate decarboxylasechromosome CDS896121 1380 - 0.634783
lysC SYNW0070 aspartate kinasechromosome CDS67497 1803 - 0.674432
metA SYNW0850 putative homoserine O-succinyltransferasechromosome CDS820024 894 - 0.607383
metB SYNW0675 putative cystathionine gamma-synthasechromosome CDS660028 1143 - 0.631671
metH SYNW1238 putative methionine synthasechromosome CDS1228875 3630 - 0.593388
nifS SYNW1253 possible cysteine desulfurase (class-V aminotransferase family)chromosome CDS1247391 1173 - 0.623188
opdA SYNW1483 putative oligopeptidase Achromosome CDS1433483 2106 + 0.630579
pabA SYNW2315 para-aminobenzoate synthase component IIchromosome CDS2215919 603 + 0.631841
pepN SYNW0756 probable aminopeptidase Nchromosome CDS737255 2604 + 0.610599
pepP SYNW0506 putative aminopeptidase Pchromosome CDS504230 1329 + 0.669676
pheA SYNW2142 Chorismate mutase-Prephenate dehydratasechromosome CDS2032140 843 - 0.652432
proA SYNW1486 Gamma-glutamyl phosphate reductasechromosome CDS1436542 1308 - 0.642202
proB SYNW0782 putative glutamate 5-kinasechromosome CDS762124 1074 + 0.662011
proC SYNW0662 putative pyrroline-5-carboxylate reductasechromosome CDS646341 795 + 0.666667
psbD1 SYNW0677 photosystem II D2 proteinchromosome CDS662692 1056 - 0.607008
psbD2 SYNW2232 photosystem II D2 proteinchromosome CDS2131112 1056 - 0.610795
psbE SYNW0204 cytochrome b559 alpha chainchromosome CDS206867 249 - 0.558233
serA SYNW0533 putative D-3-phosphoglycerate dehydrogenase (PGDH)chromosome CDS526323 1587 + 0.642722
solA SYNW0230 putative sarcosine oxidasechromosome CDS229735 1191 - 0.652393
speE SYNW2421 putative spermidine synthasechromosome CDS2325367 843 + 0.664294
spt, agt SYNW1075 serine:pyruvate/alanine:glyoxylateaminotransfera sechromosome CDS1062920 1179 + 0.594572
thiO SYNW2357 putative thiamine biosynthesis oxidoreductasechromosome CDS2261212 1155 + 0.620779
thrA,hom SYNW0711 homoserine dehydrogenasechromosome CDS697008 1308 - 0.623089
thrB SYNW1481 putative homoserine kinasechromosome CDS1430905 948 + 0.64346
thrC SYNW2526 threonine synthasechromosome CDS2433061 1107 + 0.626016
trpA SYNW1519 Tryptophan synthase alpha chainchromosome CDS1463649 810 - 0.602469
trpB SYNW2280 Tryptophan synthase, beta chainchromosome CDS2176090 1257 - 0.656325
trpC SYNW1629 Indole-3-glycerol phosphate synthasechromosome CDS1566469 885 - 0.624859
trpD/G SYNW1025 putative Anthranilate synthase component IIchromosome CDS1021671 1053 + 0.646724
trpE SYNW2045 Anthranilate synthase component I and chorismate binding enzymechromosome CDS1940531 1521 + 0.64497
trpF SYNW1733 phosphoribosylanthranilate isomerasechromosome CDS1664598 690 + 0.634783
tyrA SYNW1885 Chorismate mutasechromosome CDS1800116 384 + 0.619792
ureA SYNW2447 urease gamma subunitchromosome CDS2351736 303 + 0.643564
ureB SYNW2448 urease beta subunitchromosome CDS2352049 321 + 0.654206
ureC SYNW2449 urease alpha subunitchromosome CDS2352373 1710 + 0.646784
urtA1 SYNW2442 putative urea ABC transporter, urea binding proteinchromosome CDS2347549 1320 - 0.590909
urtA2 SYNW0374 putative urea binding proteinchromosome CDS367336 1281 - 0.572209
urtB SYNW2441 putative urea ABC transporterchromosome CDS2346301 1155 - 0.613853
urtC SYNW2440 Putative membrane protein of ABC transport systemchromosome CDS2345170 1128 - 0.589539
urtE SYNW2438 Putative ATP-binding subunit of urea ABC transport systemchromosome CDS2343711 711 - 0.606188
yccC SYNW2317 putative L-asparaginasechromosome CDS2217251 1032 - 0.648256