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2024-05-01 10:19:25

Gene list

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COG category: Amino acid transport and metabolism
Organism: Nitrosomonas europaea ATCC 19718, ATCC 19718

Number of genes found: 159

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Nitrosomonas europaea ATCC 19718, ATCC 19718
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA NE0142 putative aminotransferase proteinchromosome CDS166868 1386 - 0.520923
NA NE2419 Amino acid permeasechromosome CDS2632315 1518 - 0.539526
NA NE1247 DUF160chromosome CDS1361520 1359 - 0.551876
NA NE1126 Orn/DAP/Arg decarboxylases family 2chromosome CDS1221803 1230 + 0.521138
NA NE1447 Aminotransferase class-Vchromosome CDS1579104 1269 - 0.488574
NA NE1792 hypothetical proteinchromosome CDS1935100 1074 - 0.43203
NA NE0573 Aminotransferase class-Vchromosome CDS622060 1626 - 0.53075
NA NE0100 General substrate transporterschromosome CDS128125 1275 - 0.542745
NA NE0334 D-isomer specific 2-hydroxyacid dehydrogenasechromosome CDS373781 1212 + 0.517327
NA NE0381 Integral membrane protein, DUF6chromosome CDS431853 945 + 0.552381
NA NE0097 Haloacid dehalogenase/epoxide hydrolase familychromosome CDS125318 666 - 0.475976
NA NE0901 PDZ domain (also known as DHR or GLGF)chromosome CDS979354 3417 - 0.504536
NA NE0851 Transglutaminase-like superfamilychromosome CDS925390 1113 + 0.504942
NA NE1957 Orn/DAP/Arg decarboxylases family 2chromosome CDS2113596 1254 + 0.507177
NA NE1179 putative transmembrane proteinchromosome CDS1278486 510 - 0.515686
NA NE1795 Glutamine amidotransferase class-II:Asparagine synthasechromosome CDS1938219 1935 - 0.478036
NA NE1185 putative phosphatase proteinchromosome CDS1283570 543 - 0.565378
NA NE0831 DAHP synthetase class Ichromosome CDS903725 1179 + 0.516539
NA NE0650 NAD binding site:D-amino acid oxidasechromosome CDS705439 1107 - 0.514905
NA NE2479 appC; oligopeptide ABC transporterchromosome CDS2703635 1521 + 0.527942
NA NE2369 Homoserine dehydrogenase:ACT domainchromosome CDS2575163 1317 + 0.536067
NA NE0575 Bacterial transferase hexapeptide repeatchromosome CDS624698 939 - 0.542066
NA NE2347 General substrate transporterschromosome CDS2548891 1203 - 0.535328
NA NE0199 hypothetical proteinchromosome CDS235507 378 + 0.433862
NA NE2464 Integral membrane protein, DUF6chromosome CDS2689747 882 + 0.519274
NA NE2492 General substrate transporterschromosome CDS2720813 1176 - 0.563776
NA NE2454 MFS family transporterchromosome CDS2677645 1359 - 0.538631
NA NE0610 Glycine cleavage system P-proteinchromosome CDS663357 1452 + 0.525482
NA NE1237 Glucose-methanol-choline (GMC) oxidoreductasechromosome CDS1348472 2025 + 0.492346
NA NE0174 Aminotransferase class-Vchromosome CDS213761 1197 + 0.52381
NA NE1695 Bacterial transferase hexapeptide repeatchromosome CDS1824728 927 + 0.554477
NA NE0586 conserved hypothetical proteinchromosome CDS635552 1392 + 0.536638
NA NE0569 Cytosol aminopeptidasechromosome CDS617952 1503 + 0.531603
NA NE1282 ATP phosphoribosyltransferase regulatory subunitchromosome CDS1402305 1176 - 0.511054
NA NE1682 possible transmembrane proteinchromosome CDS1813947 1194 - 0.475712
NA NE1761 hypothetical proteinchromosome CDS1903260 1050 - 0.494286
NA NE0846 conserved hypothetical proteinchromosome CDS921639 585 - 0.417094
NA NE0892 putative phage genechromosome CDS972087 291 + 0.512028
NA NE2177 hypothetical proteinchromosome CDS2363701 1569 - 0.45188
NA NE1059 putative urea transporterchromosome CDS1148265 972 + 0.490741
NA NE1502 Integral membrane protein, DUF6chromosome CDS1633721 834 - 0.527578
NA NE0513 Amino acid transporterchromosome CDS550787 1563 + 0.53231
NA NE0104 Dihydroxyacid dehydratase/phosphogluconate dehydratasechromosome CDS133176 1674 - 0.564516
NA NE1203 possible immunogenic 75 kDa protein PG4chromosome CDS1305064 1050 + 0.493333
NA NE0614 Dihydrodipicolinate reductasechromosome CDS667443 807 - 0.548947
NA NE0441 aminopeptidase A/Ichromosome CDS479870 1494 + 0.524766
NA NE0096 hypothetical proteinchromosome CDS124910 363 - 0.487603
NA NE0034 Aminotransferase class-Vchromosome CDS43971 1218 + 0.492611
NA NE1486 Aminotransferases class-IVchromosome CDS1621228 861 + 0.509872
NA NE0609 Glycine cleavage system P-proteinchromosome CDS661926 1362 + 0.5279
NA NE2538 conserved hypothetical proteinchromosome CDS2777185 912 + 0.631579
NA NE0600 probable transmembrane proteinchromosome CDS653465 1242 - 0.512882
NA NE1533 Aminopeptidase I zinc metalloprotease (M18)chromosome CDS1667659 1305 - 0.539464
NA NE1147 Arginase familychromosome CDS1244008 972 - 0.526749
NA NE1455 GDSL lipolytic enzymechromosome CDS1588323 687 + 0.503639
NA NE0022 alanine dehydrogenasechromosome CDS29244 1158 - 0.555268
NA NE1817 hypothetical proteinchromosome CDS1966830 630 + 0.580952
NA NE1031 putative iron transport system ATP-binding proteinchromosome CDS1118992 1071 + 0.519141
NA NE0380 Iron-sulfur-dependent L-serine dehydratase single chain formchromosome CDS430161 1386 + 0.52886
NA NE0348 DUF206chromosome CDS390104 441 - 0.53288
NA NE2368 Aspartate aminotransferasechromosome CDS2573829 1227 + 0.532192
NA NE2123 Ferredoxin-dependent glutamate synthasechromosome CDS2304125 1494 + 0.537483
NA NE2258 conserved hypothetical proteinchromosome CDS2447196 390 - 0.482051
NA NE0724 possible A. fulgidus predicted coding region AF1619chromosome CDS783032 1464 - 0.519126
NA NE2196 Integral membrane protein, DUF6chromosome CDS2385211 921 + 0.558089
NA NE1826 Phosphoribosyl transferasechromosome CDS1973028 951 - 0.511041
PatB NE2400 Aminotransferases class-Ichromosome CDS2606353 1182 - 0.524535
aatA NE0786 Aminotransferases class-Ichromosome CDS853954 1194 + 0.489112
abiR NE0489 possible abortive infection phage resistance proteinchromosome CDS529967 1683 - 0.504456
ampG NE2191 putative transport transmembrane proteinchromosome CDS2380302 1368 - 0.541667
appB NE1153 appB; oligopeptide ABC transporterchromosome CDS1252318 978 + 0.502045
argA NE0778 GCN5-related N-acetyltransferase:Aspartokinase superfamilychromosome CDS844096 1335 - 0.525094
argB NE1005 Aspartokinase superfamily:Acetylglutamate kinasechromosome CDS1093776 888 - 0.495495
argC NE1482 argC; N-acetyl-gamma-glutamyl-phosphate reductasechromosome CDS1617850 1029 - 0.500486
argD NE1439 argD; acetylornithine aminotransferasechromosome CDS1569480 1182 - 0.533841
argF NE1438 argF; ornithine carbamoyltransferase proteinchromosome CDS1568392 924 - 0.5
argG NE1437 Argininosuccinate synthasechromosome CDS1567139 1215 - 0.519342
argH NE1854 argH: argininosuccinate lyasechromosome CDS2002541 1386 + 0.560606
argJ NE2213 ArgJ familychromosome CDS2400268 1230 + 0.552846
aroA NE1964 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)chromosome CDS2119969 1296 - 0.543981
aroB NE1981 3-dehydroquinate synthasechromosome CDS2142301 1110 + 0.557658
aroC NE1877 Chorismate synthasechromosome CDS2029161 1173 + 0.55243
aroE1 NE1627 Shikimate / quinate 5-dehydrogenasechromosome CDS1759452 831 + 0.555957
aroK NE1980 Shikimate kinasechromosome CDS2141563 636 + 0.506289
aroQ1 NE0651 Dehydroquinase class IIchromosome CDS706708 444 + 0.495495
asd NE0689 Semialdehyde dehydrogenasechromosome CDS747497 1122 + 0.495544
asnB,asn NE1127 Asparagine synthasechromosome CDS1223233 1860 + 0.5
carA NE1662 carA; carbamoyl-phosphate synthase (small chain) proteinchromosome CDS1797747 1152 - 0.516493
carB NE1661 Carbamoyl-phosphate synthase:Methylglyoxal synthase-like domainchromosome CDS1794525 3198 - 0.519074
cysD NE0856 Phosphoadenosine phosphosulfate reductasechromosome CDS932620 909 + 0.476348
cysH NE0855 probable cysH; 5' adenylylsulfate aps reductase proteinchromosome CDS931897 699 + 0.484979
cysM NE1443 Pyridoxal-5'-phosphate-dependent enzymes, beta familychromosome CDS1573624 888 - 0.537162
dapA NE2403 Dihydrodipicolinate synthetasechromosome CDS2612535 879 + 0.5438
dapC NE2463 Aminotransferases class-Ichromosome CDS2688444 1203 - 0.505403
dapD NE2462 Bacterial transferase hexapeptide repeatchromosome CDS2687598 822 - 0.492701
dapE NE0108 Peptidase family M20/M25/M40chromosome CDS137822 1131 + 0.548187
dapF NE1612 Diaminopimelate epimerasechromosome CDS1737613 828 + 0.547101
gcvH1 NE0608 Glycine cleavage H-proteinchromosome CDS661468 390 + 0.525641
gcvT NE0607 Glycine cleavage T-protein (aminomethyl transferase)chromosome CDS660304 1092 + 0.538462
gdhA NE1616 Glutamate/leucine/phenylalanine/valinedehydrogen asechromosome CDS1743624 1344 - 0.535714
ggt2 NE1331 Gamma-glutamyltranspeptidasechromosome CDS1458665 1794 - 0.581382
glnA1 NE0504 Glutamine synthetase type I, glnAchromosome CDS541930 1407 - 0.525231
gloA NE1427 possible gloA; lactoylglutathione lyasechromosome CDS1555806 390 + 0.482051
glyA NE1433 Serine hydroxymethyltransferase (SHMT)chromosome CDS1561233 1251 - 0.528377
hbpA NE1152 Bacterial extracellular solute-binding protein, family 5chromosome CDS1250060 2241 + 0.501562
hisA NE0644 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase proteinchromosome CDS700646 750 - 0.508
hisB NE0646 Imidazoleglycerol-phosphate dehydratasechromosome CDS702133 594 - 0.510101
hisC1 NE0647 Aminotransferases class-Ichromosome CDS702762 1080 - 0.500926
hisC2 NE0336 Aminotransferases class-Ichromosome CDS376139 1122 + 0.515152
hisD NE0872 Histidinol dehydrogenasechromosome CDS950645 1299 + 0.514242
hisE NE0641 Phosphoribosyl-ATP pyrophosphohydrolasechromosome CDS698889 339 - 0.469027
hisF NE0643 hisF Imidazoleglycerol-phosphate synthasechromosome CDS699770 777 - 0.508366
hisG NE0871 ATP phosphoribosyltransferasechromosome CDS949974 651 + 0.493088
hisH NE0645 Glutamine amidotransferase class-Ichromosome CDS701464 639 - 0.499218
hisI NE0642 Phosphoribosyl-AMP cyclohydrolasechromosome CDS699224 390 - 0.464103
ilvA NE0701 ilvA, threonine dehydratasechromosome CDS761246 1512 + 0.519841
ilvC NE1323 probable ketol-acid reductoisomerase oxidoreductase proteinchromosome CDS1443012 1017 - 0.520157
ilvE NE1893 Aminotransferases class-IVchromosome CDS2044381 924 + 0.535714
ilvH NE1324 probable acetolactate synthase isozyme III (small subunit)chromosome CDS1444124 492 - 0.481707
ilvI NE1325 Thiamine pyrophosphate dependent enzymechromosome CDS1444620 1704 - 0.508216
leuA1 NE1320 HMG-CoA Lyase-like familychromosome CDS1439777 1533 - 0.521853
leuB NE0688 leuB, 3-isopropylmalate dehydrogenasechromosome CDS746278 1071 + 0.521942
leuC NE0685 leuC; 3-isopropylmalate dehydratase (large subunit)chromosome CDS744036 1413 + 0.523708
leuD NE0687 leuD; 3-isopropylmalate dehydratase small subunitchromosome CDS745616 666 + 0.474474
lysC NE2132 Aspartokinase superfamily:ACT domainchromosome CDS2314607 1248 - 0.505609
merC NE0840 putative mercury transport proteinchromosome CDS918361 423 - 0.650118
metE NE1436 Methionine synthase, vitamin-B12 independentchromosome CDS1564554 2277 + 0.522617
metF NE0661 metF; 5,10-methylenetetrahydrofolate reductase oxidoreductase proteinchromosome CDS716736 846 + 0.520095
metH NE1623 metH Methionine synthase I, cobalamin-binding domainchromosome CDS1750574 3714 - 0.548465
metX NE2186 Alpha/beta hydrolase foldchromosome CDS2373891 1134 + 0.53351
metY NE1697 Cys/Met metabolism pyridoxal-phosphate-dependent enzymeschromosome CDS1826919 1269 - 0.539007
metZ NE0700 Cys/Met metabolism pyridoxal-phosphate-dependent enzymeschromosome CDS759959 1176 + 0.531463
mnxG NE0315 possible multicopper oxidasechromosome CDS343351 5661 + 0.492316
pepN NE0626 Aminopeptidase N, APN (CD13)chromosome CDS682037 2646 + 0.512094
pepP NE2147 metallopeptidase family M24chromosome CDS2331984 1329 - 0.518435
pheA NE0335 Prephenate dehydratase (PDT):Chorismate mutase:ACT domainchromosome CDS375031 1068 + 0.516854
potA NE1870 potA; putative spermidine/putrescine transport system ATP-binding proteinchromosome CDS2022943 1086 + 0.550645
potB NE1871 potB; putative spermidine/putrescine transport system permease proteinchromosome CDS2024031 909 + 0.559956
potC NE1872 potC; putative spermidine/putrescine transport system permease proteinchromosome CDS2024949 777 + 0.532819
potD NE1873 Bacterial extracellular solute-binding protein, family 1chromosome CDS2025728 1110 + 0.520721
prlC NE1663 Peptidase family M3chromosome CDS1799198 2106 - 0.515195
proA NE2158 Gamma-glutamyl phosphate reductase:Aldehyde dehydrogenase familychromosome CDS2342559 1269 - 0.536643
proB NE1290 Aspartokinase superfamily:Glutamate 5-kinase:PUA domainchromosome CDS1410232 1122 - 0.554367
proC NE0393 Delta 1-pyrroline-5-carboxylate reductasechromosome CDS445939 813 + 0.505535
selD NE0733 AIR synthase related protein:Selenide water dikinasechromosome CDS794278 1143 - 0.553806
serA NE1688 D-isomer specific 2-hydroxyacid dehydrogenasechromosome CDS1819114 936 + 0.563034
serB NE0439 possible serB; phosphoserine phosphatase proteinchromosome CDS477187 831 - 0.511432
serC NE0333 Aminotransferase class-V:Phosphoserine aminotransferasechromosome CDS372682 1107 + 0.518519
speC NE0909 Orn/DAP/Arg decarboxylases family 2chromosome CDS990845 1176 - 0.508503
speE,ywhF NE0347 possible speE, ywhF; spermidine synthasechromosome CDS389130 978 - 0.547035
thrC NE2370 thrC; probable threonine synthase proteinchromosome CDS2576628 1407 + 0.515281
trpA NE0694 trpA; tryptophan synthase (alpha chain) proteinchromosome CDS753980 828 + 0.5157
trpB NE0693 Tryptophan synthase, beta chainchromosome CDS752734 1194 + 0.525963
trpC NE0012 Indole-3-glycerol phosphate synthasechromosome CDS15451 921 - 0.535288
trpD NE0013 phosphoribosylanthranilate transferasechromosome CDS16373 1026 - 0.574074
trpE NE2150 Anthranilate synthase component I and chorismate binding enzymechromosome CDS2334991 1488 + 0.522177
trpF NE0692 N-(5'phosphoribosyl)anthranilate isomerase (PRAI)chromosome CDS752115 636 + 0.517296
trpG NE0014 trpG; panthranilate synthase component II (glutamine amido-transferase) proteinchromosome CDS17395 600 - 0.501667
tyrA NE0337 Prephenate dehydrogenasechromosome CDS377283 903 + 0.539313