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2024-05-01 18:08:20

Gene list

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COG category: Amino acid transport and metabolism
Organism: Helicobacter pylori J99, J99

Number of genes found: 103

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Helicobacter pylori J99, J99
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
ald L-ALANINE DEHYDROGENASEchromosome CDS1575308 1143 + 0.447069
ansB L-asparaginase IIchromosome CDS740291 999 + 0.461461
aroA 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYL TRANSFERASEchromosome CDS1088513 1290 + 0.397674
aroB 3-DEHYDROQUINATE SYNTHASEchromosome CDS288653 1032 + 0.385659
aroC CHORISMATE SYNTHASEchromosome CDS673120 1098 + 0.431694
aroD 3-DEHYDROQUINATE DEHYDRATASEchromosome CDS415490 513 + 0.417154
aroE SHIKIMATE 5-DEHYDROGENASEchromosome CDS1303646 801 - 0.393258
aroF PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASEchromosome CDS137774 1350 + 0.452593
aroK SHIKIMATE KINASE Ichromosome CDS159623 489 + 0.392638
asd aspartate-semialdehyde dehydrogenasechromosome CDS1239301 1041 - 0.422671
aspA ASPARTATE AMMONIA-LYASEchromosome CDS657124 1407 + 0.442075
aspB ASPARTATE AMINOTRANSFERASEchromosome CDS683596 1173 + 0.433078
carA CARBAMOYL-PHOSPHATE SYNTHASE SMALL CHAINchromosome CDS1289112 1128 + 0.440603
carB CARBAMOYL-PHOSPHATE SYNTHASE LARGE CHAINchromosome CDS940417 3258 - 0.421731
cysE O-SERINE ACETYLTRANSFERASEchromosome CDS1265253 516 - 0.515504
cysK CYSTEINE SYNTHASEchromosome CDS110644 918 - 0.461874
dadA D-Amino acid dehydrogenasechromosome CDS972614 1233 - 0.410381
dapA DIHYDRODIPICOLINATE SYNTHASEchromosome CDS436875 903 - 0.431894
dapB DIHYDRODIPICOLINATE REDUCTASEchromosome CDS499128 765 + 0.420915
dapD putative 2,3,4,5-TETRAHYDROPYRIDINE-2-CARBOXYLATE N-SUCCINYLTRANSFERASEchromosome CDS633616 1206 + 0.410448
dapE SUCCINYL-DIAMINOPIMELATE DESUCCINYLASEchromosome CDS215821 1167 - 0.415596
dapF DIAMINOPIMELATE EPIMERASEchromosome CDS561210 822 - 0.385645
dppA PERIPLASMIC DIPEPTIDE TRANSPORT SUBSTRATE-BINDING PROTEINchromosome CDS312996 1641 + 0.414991
dppB DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEINchromosome CDS314647 1005 + 0.454726
dppD DIPEPTIDE TRANSPORT SYSTEM DIPEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEINchromosome CDS316516 864 + 0.435185
dppF DIPEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEINchromosome CDS317376 807 + 0.42627
edd PHOSPHOGLUCONATE DEHYDRATASEchromosome CDS1137303 1827 - 0.426929
gdhA GLUTAMATE DEHYDROGENASEchromosome CDS1110582 1347 + 0.44098
ggt GAMMA-GLUTAMYLTRANSPEPTIDASEchromosome CDS1162333 1704 - 0.448357
glnA GLUTAMINE SYNTHETASEchromosome CDS501230 1446 - 0.417704
gltS Sodium/Glutamate Symporterchromosome CDS1530659 1227 - 0.427058
glyA SERINE HYDROXYMETHYLTRANSFERASEchromosome CDS186251 1251 + 0.410871
hom HOMOSERINE DEHYDROGENASEchromosome CDS839646 1266 + 0.413902
ilvC KETOL-ACID REDUCTOISOMERASEchromosome CDS341286 993 + 0.417925
ilvE BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASEchromosome CDS1490543 1023 - 0.460411
jhp0042 putativechromosome CDS48440 993 - 0.404834
jhp0206 putative AMINOTRANSFERASEchromosome CDS225126 1164 + 0.447594
jhp0218 putativechromosome CDS239509 1173 + 0.387042
jhp0261 putativechromosome CDS281462 558 + 0.399642
jhp0276 putativechromosome CDS305191 303 + 0.343234
jhp0298 putativechromosome CDS326532 1146 - 0.404014
jhp0406 amino acid permeasechromosome CDS433313 1428 - 0.420868
jhp0444 putative paralog of HpaAchromosome CDS481063 849 - 0.355713
jhp0503 putativechromosome CDS553975 438 - 0.374429
jhp0568 AMINOTRANSFERASEchromosome CDS631254 1128 - 0.390957
jhp0632 putative HYDANTOIN UTILIZATIONchromosome CDS703378 2298 - 0.436466
jhp0633 putative HYDANTOIN UTILIZATIONchromosome CDS705687 2139 - 0.455353
jhp0673 putative aminotransferasechromosome CDS753461 1110 - 0.427928
jhp0754 putative osmoprotection binding proteinchromosome CDS832859 486 + 0.378601
jhp0758 osmoprotection ATP-binding proteinchromosome CDS836565 651 + 0.388633
jhp0794 putativechromosome CDS874656 525 - 0.377143
jhp0874 putative AMINO ACID ABC TRANSPORTER, PERMEASE PROTEINchromosome CDS968545 714 - 0.407563
jhp0875 putative AMINO ACID ABC TRANSPORTER, BINDING PROTEIN PRECURSORchromosome CDS969242 774 - 0.417313
jhp0877 putative SODIUM/ALANINE SYMPORTERchromosome CDS971221 1353 - 0.430155
jhp0976 putative AMINOTRANSFERASEchromosome CDS1083476 1323 - 0.410431
jhp1092 putativechromosome CDS1210206 1161 - 0.385874
jhp1096 AMINO ACID ABC TRANSPORTER, PERMEASE PROTEINchromosome CDS1217517 654 + 0.405199
jhp1097 AMINO ACID ABC TRANSPORTER, PERMEASE PROTEINchromosome CDS1218172 672 + 0.388393
jhp1098 AMINO ACID ABC TRANSPORTER, ATP-BINDING PROTEINchromosome CDS1218845 747 + 0.382865
jhp1099 AMINO ACID ABC TRANSPORTER, BINDING PROTEIN PRECURSORchromosome CDS1219640 834 + 0.377698
jhp1107 putative transporterchromosome CDS1230455 1332 + 0.413664
jhp1155 putativechromosome CDS1286335 897 + 0.42029
jhp1173 putativechromosome CDS1306165 1788 - 0.400447
jhp1241 putativechromosome CDS1359097 1131 + 0.387268
jhp1250 putativechromosome CDS1369261 357 - 0.366947
jhp1251 putativechromosome CDS1369611 687 - 0.41048
jhp1400 putativechromosome CDS1531971 1200 + 0.428333
jhp1419 putativechromosome CDS1559902 240 + 0.35
jhp1451 putativechromosome CDS1599459 339 + 0.427729
jhp1474 putativechromosome CDS1625102 444 - 0.333333
kgtP ALPHA-KETOGLUTARATE PERMEASEchromosome CDS361203 1314 - 0.407154
lysA DIAMINOPIMELATE DECARBOXYLASEchromosome CDS303969 1218 + 0.407225
lysC ASPARTOKINASE 2 ALPHA AND BETA SUBUNITSchromosome CDS1281880 1218 + 0.454844
metB putative CYSTATHIONINE GAMMA-SYNTHASEchromosome CDS109477 1143 - 0.478565
nspC putative carboxynorspermidine decarboxylasechromosome CDS19486 1218 + 0.438424
orf16 cag island proteinchromosome CDS525169 1608 - 0.363806
pabB P-AMINOBENZOATE SYNTHETASEchromosome CDS306379 1704 + 0.375
pepA AMINOPEPTIDASEchromosome CDS565914 1491 - 0.404427
pepF OLIGOPEPTIDASEchromosome CDS453909 1737 - 0.379965
pepQ putative proline peptidasechromosome CDS416015 1074 + 0.418994
proC putative PYRROLINE-5-CARBOXYLATE REDUCTASEchromosome CDS1205822 774 + 0.406977
proP proline/betaine transporterchromosome CDS965126 1359 - 0.398087
prsA PHOSPHORIBOSYL PYROPHOSPHATE SYNTHETASEchromosome CDS759067 957 + 0.447231
putP sodium/proline symporterchromosome CDS53403 1491 - 0.423206
rocF arginasechromosome CDS1574136 969 - 0.400413
sdaB L-SERINE/L-THREONINEDEAMINASEchromosome CDS134985 1368 - 0.432749
sdaC L-serine transporter, similar to E. coli nhaBchromosome CDS136352 1242 - 0.39211
selA L-SERYL-TRNA(SER) SELENIUM TRANSFERASEchromosome CDS1539018 1173 + 0.393862
serA D-3-PHOSPHOGLYCERATE DEHYDROGENASEchromosome CDS1092953 1575 + 0.418413
serB PHOSPHOSERINE PHOSPHATASEchromosome CDS660576 624 - 0.408654
speA arginine decarboxylasechromosome CDS1065542 1848 - 0.409632
speE putative spermidine synthasechromosome CDS848852 789 - 0.370089
thrB HOMOSERINE KINASEchromosome CDS402520 882 + 0.414966
thrC THREONINE SYNTHASEchromosome CDS98623 1461 - 0.412047
trpA TRYPTOPHAN SYNTHASE ALPHA CHAINchromosome CDS1331406 789 - 0.395437
trpB TRYPTOPHAN SYNTHASE BETA CHAINchromosome CDS1332191 1182 - 0.44247
trpC INDOLE-3-GLYCEROL PHOSPHATE SYNTHASEchromosome CDS1333374 1359 - 0.376748
trpD ANTHRANILATE PHOSPHORIBOSYLTRANSFERASEchromosome CDS1334725 1008 - 0.410714
trpE ANTHRANILATE SYNTHASE COMPONENT Ichromosome CDS1336310 1503 - 0.403194
trpG ANTHRANILATE SYNTHASE COMPONENT IIchromosome CDS1335729 585 - 0.391453
tyrA PREPHENATE DEHYDROGENASEchromosome CDS1418035 828 + 0.428744
ureA UREASE ALPHA SUBUNITchromosome CDS74744 717 - 0.422594
ureB UREASE BETA SUBUNITchromosome CDS73031 1710 - 0.449123