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2024-04-29 04:49:07

Gene list

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COG category: Amino acid transport and metabolism
Organism: Dehalococcoides sp. CBDB1, CBDB1

Number of genes found: 139

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Dehalococcoides sp. CBDB1, CBDB1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA cbdbA604 conserved hypothetical membrane proteinchromosome CDS495303 489 + 0.474438
NA cbdbA59 hypothetical proteinchromosome CDS38797 243 - 0.469136
NA cbdbA1458 peptide ABC transporter, ATP-binding proteinchromosome CDS1151355 936 - 0.509615
NA cbdbA828 probable ATP phosphoribosyltransferasechromosome CDS674062 1407 - 0.484009
NA cbdbA1034 peptide ABC transporter, ATP-binding proteinchromosome CDS835685 978 - 0.464213
NA cbdbA1474 major facilitator family transporterchromosome CDS1160994 1398 - 0.494278
NA cbdbA899 branched-chain amino acid ABC transporter,permease proteinchromosome CDS736805 885 - 0.489266
NA cbdbA1255 hypothetical membrane proteinchromosome CDS1005717 909 - 0.480748
NA cbdbA1461 peptide ABC transporter, permease proteinchromosome CDS1153249 840 - 0.520238
NA cbdbA581 soluble hydrogenase, tritium exchange subunitchromosome CDS472516 1089 - 0.494949
NA cbdbA1463 peptide ABC transporter, periplasmic peptide-binding proteinchromosome CDS1155124 1632 - 0.508578
NA cbdbA407 aconitase C-terminal domain proteinchromosome CDS346837 504 + 0.490079
NA cbdbA783 major facilitator family transporterchromosome CDS638710 1263 - 0.461599
NA cbdbA694 hypothetical proteinchromosome CDS571443 426 - 0.448357
NA cbdbA369 amino acid ABC transporter, ATP-binding proteinchromosome CDS312643 762 - 0.481627
NA cbdbA1054 conserved hypothetical proteinchromosome CDS856367 771 - 0.472114
NA cbdbA1459 peptide ABC transporter, ATP-binding proteinchromosome CDS1152284 969 - 0.494324
NA cbdbA1433 hypothetical proteinchromosome CDS1131231 249 - 0.497992
NA cbdbA897 putative branched-chain amino acid ABC transporter,periplasmic amino acid-binding proteinchromosome CDS734415 1293 - 0.46017
NA cbdbA143 pyridine nucleotide-disulphide oxidoreductase family proteinchromosome CDS135231 1803 - 0.502496
NA cbdbA405 homoaconitate hydratase family proteinchromosome CDS345584 1254 + 0.519936
NA cbdbA9 hypothetical proteinchromosome CDS9584 1164 + 0.485395
NA cbdbA896 putative branched-chain amino acid ABC transporter,periplasmic amino acid-binding proteinchromosome CDS733040 1287 - 0.435897
NA cbdbA1238 major facilitator family transporterchromosome CDS994341 1407 - 0.484719
NA cbdbA1039 ABC-type dipeptide/oligopeptide/nickel transport system, periplasmic componentchromosome CDS839563 1677 - 0.493143
NA cbdbA1036 peptide ABC transporter, ATP-binding proteinchromosome CDS836647 1008 - 0.494048
NA cbdbA180 conserved hypothetical membrane proteinchromosome CDS162717 894 - 0.498881
NA cbdbA1341 hypothetical membrane proteinchromosome CDS1064723 351 - 0.441595
NA cbdbA570 conserved hypothetical proteinchromosome CDS462444 1020 - 0.477451
NA cbdbA1055 glutamate synthase, alpha subunitchromosome CDS857138 1503 - 0.495675
NA cbdbA371 amino acid ABC transporter, periplasmic aminoacid-binding proteinchromosome CDS314278 774 - 0.476744
NA cbdbA553 aminotransferase, classes I and IIchromosome CDS448760 1143 - 0.472441
NA cbdbA269 transporter, LysE familychromosome CDS236343 624 + 0.487179
NA cbdbA895 branched chain amino acid ABC transporter,ATP-binding proteinchromosome CDS732228 792 - 0.469697
NA cbdbA471 hypothetical proteinchromosome CDS382716 195 - 0.446154
NA cbdbB9 hypothetical membrane proteinchromosome CDS166392 426 + 0.359155
NA cbdbA1058 glutamine amidotransferase, class IIchromosome CDS859397 1131 - 0.475685
NA cbdbA973 major facilitator family transporterchromosome CDS791661 1272 - 0.493711
NA cbdbA1462 peptide ABC transporter, permease proteinchromosome CDS1154090 975 - 0.508718
NA cbdbA714 putative aspartate aminotransferasechromosome CDS579674 1167 - 0.473865
NA cbdbA257 cysteine desulfurasechromosome CDS225348 1152 + 0.512153
NA cbdbA565 conserved hypothetical proteinchromosome CDS458846 423 - 0.465721
NA cbdbA1072 hypothetical proteinchromosome CDS870123 663 + 0.457014
NA cbdbA1708 homocitrate synthasechromosome CDS1371649 1248 - 0.495192
NA cbdbA545 hypothetical proteinchromosome CDS444252 1227 + 0.471883
NA cbdbA1621 major facilitator family transporterchromosome CDS1314289 1662 - 0.487365
NA cbdbA1038 peptide ABC transporter, permease proteinchromosome CDS838569 918 - 0.473856
NA cbdbA849 putative hydrogenase subunitchromosome CDS693997 1386 + 0.470418
NA cbdbA370 amino acid ABC transporter, permease proteinchromosome CDS313404 822 - 0.487835
NA cbdbA803 2-isopropylmalate synthasechromosome CDS652493 1602 - 0.460674
NA cbdbA732 2,3-diketo-5-methylthio-1- phosphopentanephosphatase family proteinchromosome CDS599494 660 - 0.425758
NA cbdbA417 acetyltransferase, GNAT familychromosome CDS352130 477 - 0.490566
NA cbdbA671 metallopeptidase, M24 familychromosome CDS551653 1092 - 0.478022
NA cbdbA1037 peptide ABC transporter, permease proteinchromosome CDS837656 906 - 0.493377
NA cbdbA408 putative isocitrate dehydrogenasechromosome CDS347355 1080 + 0.473148
NA cbdbA860 conserved hypothetical membrane proteinchromosome CDS705174 1386 + 0.44733
NA cbdbA1028 hypothetical transport proteinchromosome CDS831951 864 + 0.511574
NA cbdbA423 prephenate dehydrogenasechromosome CDS353928 867 - 0.520185
NA cbdbA861 aminopeptidase proteinchromosome CDS706709 1110 + 0.456757
NA cbdbA145 alcohol dehydrogenase, zinc-containingchromosome CDS137575 1032 + 0.534884
NA cbdbA898 branched-chain amino acid ABC transporter,permease proteinchromosome CDS735750 1053 - 0.472934
NA cbdbA892 branched-chain amino acid ABC transporter,ATP-binding proteinchromosome CDS729855 831 - 0.456077
NA cbdbA481 conserved hypothetical proteinchromosome CDS390297 1032 - 0.504845
NA cbdbA547 ABC-type dipeptide/oligopeptide/nickel transport system, periplasmic componentchromosome CDS446151 1593 + 0.472693
arcB cbdbA155 ornithine cyclodeaminasechromosome CDS146608 960 + 0.510417
argB cbdbA1180 acetylglutamate kinasechromosome CDS952201 819 + 0.526252
argC cbdbA1722 N-acetyl-gamma-glutamyl-phosphate reductasechromosome CDS1378885 1026 - 0.5
argD cbdbA1181 acetylornithine aminotransferasechromosome CDS953092 1197 + 0.493734
argF cbdbA1353 ornithine carbamoyltransferasechromosome CDS1071868 936 + 0.519231
argG cbdbA1183 argininosuccinate synthasechromosome CDS955248 1221 + 0.511876
argH cbdbA1185 argininosuccinate lyasechromosome CDS956469 1386 + 0.5
argJ cbdbA1179 arginine biosynthesis bifunctional protein ArgJchromosome CDS950977 1218 + 0.487685
aroA cbdbA1449 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthetasechromosome CDS1142645 1023 + 0.510264
aroA cbdbA427 3-phosphoshikimate 1-carboxyvinyltransferasechromosome CDS356951 1263 - 0.502771
aroB cbdbA351 3-dehydroquinate synthasechromosome CDS299437 1095 + 0.474886
aroB cbdbA431 3-dehydroquinate synthasechromosome CDS360217 1080 - 0.486111
aroC cbdbA425 chorismate synthasechromosome CDS355864 1095 - 0.494064
aroD cbdbA430 3-dehydroquinate dehydratase, type Ichromosome CDS359552 669 - 0.493274
aroE cbdbA429 shikimate 5-dehydrogenasechromosome CDS358708 861 - 0.481998
aroF cbdbA432 phospho-2-dehydro-3-deoxyheptonate aldolasechromosome CDS361316 1056 - 0.50947
aroK cbdbA428 shikimate kinasechromosome CDS358194 531 - 0.431262
asd cbdbA934 aspartate-semialdehyde dehydrogenasechromosome CDS764163 1017 + 0.487709
aspC cbdbA1292 aspartate aminotransferasechromosome CDS1023659 1197 + 0.499582
carA cbdbA1117 carbamoyl-phosphate synthase, small subunitchromosome CDS904484 1095 + 0.497717
carB cbdbA1118 carbamoyl-phosphate synthase, large subunitchromosome CDS905604 3270 + 0.505505
cobD cbdbA639 putative threonine-phosphate decarboxylase (L-threonine-O-3-phosphate decarboxylase)chromosome CDS525917 1107 + 0.467028
cysE cbdbA1678 serine O-acetyltransferasechromosome CDS1352322 693 - 0.518037
cysK cbdbA1063 putative O-acetylserine(thiol)-lyase-A related proteinchromosome CDS863743 963 + 0.509865
dapA cbdbA935 dihydrodipicolinate synthasechromosome CDS765182 894 + 0.489933
dapB cbdbA933 dihydrodipicolinate reductasechromosome CDS763361 792 + 0.491162
dapF cbdbA715 diaminopimelate epimerasechromosome CDS580827 855 - 0.471345
glnA cbdbA1568 glutamine synthetasechromosome CDS1255494 1506 + 0.469456
glnA cbdbA1050 glutamine synthetase, type Ichromosome CDS852516 1332 - 0.468468
glnB cbdbA1051 putative P2-like signal transmitter protein GlnBchromosome CDS853974 339 - 0.445428
gltA cbdbA46 glutamate synthase (NADPH), homotetramericchromosome CDS33447 1398 + 0.511445
gly1 cbdbA181 putative threonine aldolase (COG2008)chromosome CDS163704 1035 + 0.520773
glyA cbdbA390 serine hydroxymethyltransferasechromosome CDS332591 1248 - 0.514423
hisA cbdbA1278 phosphoribosylformimino-5- aminoimidazolecarboxamide ribotide isomerasechromosome CDS1016912 735 - 0.484354
hisB cbdbA824 imidazoleglycerol-phosphate dehydratasechromosome CDS671064 591 - 0.483926
hisC cbdbA825 histidinol-phosphate aminotransferasechromosome CDS671656 1077 - 0.455896
hisD cbdbA826 histidinol dehydrogenasechromosome CDS672745 1311 - 0.482075
hisF cbdbA1057 imidazoleglycerol phosphate synthase, cyclase subunitchromosome CDS858642 762 - 0.509186
hisF cbdbA916 imidazoleglycerol phosphate synthase, cyclase subunitchromosome CDS750153 807 + 0.442379
hisH cbdbA1060 imidazole glycerol phosphate synthase,glutamineamidotransferase subunitchromosome CDS861844 618 - 0.478964
hisI cbdbA1276 phosphoribosyl-AMP cyclohydrolasechromosome CDS1016002 315 - 0.504762
hymD cbdbA173 putative [Fe] hydrogenase, HymD subunitchromosome CDS159944 504 + 0.5
ilvB cbdbA813 acetolactate synthase, large subunitchromosome CDS660681 1710 - 0.490643
ilvC cbdbA811 ketol-acid reductoisomerasechromosome CDS659152 999 - 0.494494
ilvD cbdbA815 dihydroxy-acid dehydratasechromosome CDS662412 1668 - 0.48801
ilvE cbdbA11 branched-chain amino acid aminotransferasechromosome CDS11400 921 - 0.491857
ilvN cbdbA812 acetolactate synthase, small subunitchromosome CDS660169 537 - 0.458101
kamA cbdbA615 lysine 2,3-aminomutasechromosome CDS504126 1320 + 0.454545
leuA cbdbA808 2-isopropylmalate synthasechromosome CDS657459 1518 - 0.486825
leuB cbdbA804 3-isopropylmalate dehydrogenasechromosome CDS654101 1098 - 0.468124
leuC cbdbA806 3-isopropylmalate dehydratase, large subunitchromosome CDS655771 1251 - 0.490807
leuD cbdbA805 3-isopropylmalate dehydratase, small subunitchromosome CDS655199 501 - 0.449102
lysA cbdbA508 diaminopimelate decarboxylasechromosome CDS408204 1305 + 0.484291
metL cbdbA1731 aspartate kinase, monofunctional classchromosome CDS1388287 1218 - 0.515599
metM cbdbA1123 homoserine dehydrogenasechromosome CDS911409 1302 - 0.496928
pepA cbdbA1001 cytosol aminopeptidasechromosome CDS809403 1494 - 0.472557
pheA cbdbA424 chorismate mutase/prephenate dehydratase (P-protein)chromosome CDS354791 1077 - 0.476323
pheA cbdbA1639 prephenate dehydratasechromosome CDS1326986 831 - 0.43923
proA cbdbA1224 gamma-glutamyl phosphate reductasechromosome CDS984082 1275 + 0.505882
proB cbdbA1212 glutamate 5-kinasechromosome CDS979137 1122 + 0.502674
proC cbdbA200 pyrroline-5-carboxylate reductasechromosome CDS183068 804 - 0.521144
prs cbdbA389 ribose-phosphate pyrophosphokinasechromosome CDS331601 975 - 0.473846
rdhB cbdbA1094 putative reductive dehalogenase anchoring proteinchromosome CDS887469 297 + 0.488215
rdhB cbdbB5 putative reductive dehalogenase anchoring proteinchromosome CDS80419 270 - 0.425926
rdhB cbdbB4 putative reductive dehalogenase anchoring proteinchromosome CDS72179 297 - 0.387205
serA cbdbA580 D-3-phosphoglycerate dehydrogenasechromosome CDS470934 1581 - 0.510436
thrC cbdbA1122 threonine synthasechromosome CDS910354 1047 - 0.497612
trpA cbdbA1451 tryptophan synthase, alpha subunitchromosome CDS1144851 768 + 0.486979
trpB cbdbA1450 tryptophan synthase, beta subunitchromosome CDS1143655 1200 + 0.520833
trpC cbdbA1445 indole-3-glycerol phosphate synthasechromosome CDS1141216 780 + 0.489744
trpD cbdbA1444 anthranilate phosphoribosyltransferasechromosome CDS1140186 1026 + 0.506823
trpD cbdbA146 anthranilate phosphoribosyltransferasechromosome CDS138621 1125 + 0.512889
trpE cbdbA1441 anthranilate synthase component Ichromosome CDS1138150 1458 + 0.498628
trpF cbdbA1447 N-(5'phosphoribosyl)anthranilate isomerasechromosome CDS1141992 660 + 0.50303
trpG cbdbA1442 anthranilate synthase component IIchromosome CDS1139591 591 + 0.472081