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2024-05-17 12:47:50

Gene list

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COG category: Amino acid transport and metabolism
Organism: Helicobacter pylori 26695, 26695

Number of genes found: 102

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Helicobacter pylori 26695, 26695
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
HP0020 carboxynorspermidine decarboxylase (nspC)RecName: Full=Carboxynorspermidine/carboxyspermidine decarboxylase; Short=CANS DC/CAS DC; Short=CANSDC/CASDC; EC=4.1.1.96; chromosome CDS19342 1218 + 0.42775
HP0049 H. pylori predicted coding region HP0049SubName: Full=Uncharacterized protein; chromosome CDS48291 993 - 0.401813
HP0055 proline permease (putP)SubName: Full=Proline permease (PutP); SubName: Full=Sodium/proline symporter; chromosome CDS56224 1491 - 0.425889
HP0072 urease beta subunit (urea amidohydrolase) (ureB)RecName: Full=Urease subunit beta; EC=3.5.1.5; AltName: Full=Urea amidohydrolase subunit beta; chromosome CDS75527 1710 - 0.442105
HP0073 urease alpha subunit (ureA) (urea amidohydrolase)RecName: Full=Urease subunit alpha; EC=3.5.1.5; AltName: Full=Urea amidohydrolase subunit alpha; chromosome CDS77240 717 - 0.41841
HP0098 threonine synthase (thrC)RecName: Full=Threonine synthase; Short=TS; EC=4.2.3.1; chromosome CDS102461 1461 - 0.405202
HP0106 cystathionine gamma-synthase (metB)RecName: Full=Cystathionine gamma-synthase; Short=CGS; EC=2.5.1.48; AltName: Full=O-succinylhomoserine (thiol)-lyase; chromosome CDS113333 1143 - 0.475066
HP0107 cysteine synthetase (cysK)RecName: Full=Cysteine synthase; Short=CSase; EC=2.5.1.47; AltName: Full=O-acetylserine (thiol)-lyase; Short=OAS-TL; AltName: Full=O-acetylserine sulfhydrylase; chromosome CDS114500 921 - 0.465798
HP0132 L-serine deaminase (sdaA)RecName: Full=L-serine dehydratase; Short=SDH; EC=4.3.1.17; AltName: Full=L-serine deaminase; Short=L-SD; chromosome CDS142227 1368 - 0.432749
HP0133 serine transporter (sdaC)SubName: Full=Serine transporter (SdaC); chromosome CDS143594 1242 - 0.387279
HP0134 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (dhs1)SubName: Full=3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (Dhs1); SubName: Full=Phospho-2-dehydro-3-deoxyheptonate aldolase; chromosome CDS145016 1350 + 0.456296
HP0157 shikimic acid kinase I (aroK)RecName: Full=Shikimate kinase; Short=SK; EC=2.7.1.71; chromosome CDS166150 489 + 0.390593
HP0183 serine hydroxymethyltransferase (glyA)RecName: Full=Serine hydroxymethyltransferase; Short=SHMT; Short=Serine methylase; EC=2.1.2.1; chromosome CDS190186 1251 + 0.411671
HP0212 succinyl-diaminopimelate desuccinylase (dapE)RecName: Full=Succinyl-diaminopimelate desuccinylase; Short=SDAP desuccinylase; EC=3.5.1.18; AltName: Full=N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase; chromosome CDS219098 1152 - 0.41059
HP0220 synthesis of [Fe-S] cluster (nifS)RecName: Full=Cysteine desulfurase IscS; EC=2.8.1.7; chromosome CDS228339 1164 + 0.449313
HP0233 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS242677 1173 + 0.404092
HP0283 3-dehydroquinate synthase (aroB)RecName: Full=3-dehydroquinate synthase; EC=4.2.3.4; chromosome CDS291465 1032 + 0.379845
HP0290 diaminopimelate decarboxylase (dap decarboxylase) (lysA)RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase; Short=DAPDC; EC=4.1.1.20; chromosome CDS306753 1218 + 0.415435
HP0291 H. pylori predicted coding region HP0291SubName: Full=Uncharacterized protein; chromosome CDS307975 291 + 0.323024
HP0293 para-aminobenzoate synthetase (pabB)SubName: Full=Para-amino benzoate synthetase; SubName: Full=Para-aminobenzoate synthetase (PabB); chromosome CDS309151 1680 + 0.361905
HP0298 dipeptide ABC transporter, periplasmic dipeptide-binding protein (dppA)SubName: Full=Dipeptide ABC transporter periplasmic dipeptide-binding protein (DppA); SubName: Full=Dipeptide ABC transporter, periplasmic dipeptide-binding protein (DppA); chromosome CDS315585 1650 + 0.411515
HP0299 dipeptide ABC transporter, permease protein (dppB)SubName: Full=Dipeptide ABC transporter permease (DppB); SubName: Full=Dipeptide ABC transporter, permease protein (DppB); chromosome CDS317245 1005 + 0.439801
HP0300 dipeptide ABC transporter, permease protein (dppC)SubName: Full=Dipeptide ABC transporter permease (DppC); SubName: Full=Dipeptide ABC transporter, permease protein (DppC); chromosome CDS318249 858 + 0.454545
HP0301 dipeptide ABC transporter, ATP-binding protein (dppD)SubName: Full=Dipeptide ABC transporter ATP-binding protein (DppD); SubName: Full=Dipeptide ABC transporter, ATP-binding protein (DppD); chromosome CDS319118 864 + 0.425926
HP0302 dipeptide ABC transporter, ATP-binding protein (dppF)SubName: Full=Dipeptide ABC transporter ATP-binding protein DppF; SubName: Full=Dipeptide ABC transporter, ATP-binding protein (DppF); chromosome CDS319978 807 + 0.42627
HP0313 nitrite extrusion protein (narK)SubName: Full=Nitrite extrusion protein (NarK); chromosome CDS328947 1146 - 0.408377
HP0330 ketol-acid reductoisomerase (ilvC)RecName: Full=Ketol-acid reductoisomerase; EC=1.1.1.86; AltName: Full=Acetohydroxy-acid isomeroreductase; AltName: Full=Alpha-keto-beta-hydroxylacyl reductoisomerase; chromosome CDS345554 993 + 0.417925
HP0344 H. pylori predicted coding region HP0344SubName: Full=Uncharacterized protein; chromosome CDS352310 465 + 0.423656
HP0380 glutamate dehydrogenase (gdhA)RecName: Full=NADP-specific glutamate dehydrogenase; Short=NADP-GDH; EC=1.4.1.4; chromosome CDS390125 1347 - 0.439495
HP0383 H. pylori predicted coding region HP0383SubName: Full=Uncharacterized protein; chromosome CDS393770 525 + 0.367619
HP0397 phosphoglycerate dehydrogenase (serA)SubName: Full=D-3-phosphoglycerate dehydrogenase; SubName: Full=Phosphoglycerate dehydrogenase (SerA); chromosome CDS407264 1575 - 0.413968
HP0401 3-phosphoshikimate 1-carboxyvinyltransferase (aroA)RecName: Full=3-phosphoshikimate 1-carboxyvinyltransferase; EC=2.5.1.19; AltName: Full=5-enolpyruvylshikimate-3-phosphate synthase; Short=EPSP synthase; Short=EPSPS; chromosome CDS412036 1290 - 0.395349
HP0405 nifS-like proteinSubName: Full=NifS-like protein; chromosome CDS417035 1323 + 0.415722
HP0422 arginine decarboxylase (speA)RecName: Full=Arginine decarboxylase; EC=4.1.1.19; chromosome CDS436282 1848 + 0.406385
HP0470 oligoendopeptidase F (pepF)SubName: Full=Oligoendopeptidase F; SubName: Full=Oligoendopeptidase F (PepF); chromosome CDS490975 1737 - 0.385723
HP0510 dihydrodipicolinate reductase (dapB)RecName: Full=4-hydroxy-tetrahydrodipicolinate reductase; Short=HTPA reductase; EC=1.17.1.8; chromosome CDS536612 765 + 0.418301
HP0512 glutamine synthetase (glnA)RecName: Full=Glutamine synthetase; EC=6.3.1.2; AltName: Full=Glutamate--ammonia ligase; chromosome CDS538237 1446 - 0.421853
HP0529 cag pathogenicity island protein (cag9)SubName: Full=Cag pathogenicity island protein (Cag9); chromosome CDS561625 1608 - 0.361318
HP0566 diaminopimelate epimerase (dapF)RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7; chromosome CDS598047 822 - 0.391728
HP0570 aminopeptidase a/i (pepA)RecName: Full=Cytosol aminopeptidase; EC=3.4.11.1; AltName: Full=Leucine aminopeptidase; Short=LAP; EC=3.4.11.10; AltName: Full=Leucyl aminopeptidase; chromosome CDS602181 1491 - 0.404427
HP0586 H. pylori predicted coding region HP0586SubName: Full=Uncharacterized protein; chromosome CDS616194 2934 - 0.350034
HP0624 solute-binding signature and mitochondrial signature protein (aspB)SubName: Full=Solute-binding signature and mitochondrial signature protein (AspB); SubName: Full=Uncharacterized protein; chromosome CDS670363 1128 - 0.396277
HP0626 tetrahydrodipicolinate N-succinyltransferase (dapD)RecName: Full=2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; EC=2.3.1.117; AltName: Full=Tetrahydrodipicolinate N-succinyltransferase; Short=THDP succinyltransferase; Short=THP succinyltransferase; AltName: Full=Tetrahydropicolinate succinylase; chromosome CDS672692 1206 + 0.40796
HP0649 aspartate ammonia-lyase (aspA)RecName: Full=Aspartate ammonia-lyase; Short=Aspartase; EC=4.3.1.1; chromosome CDS694612 1407 + 0.439232
HP0652 phosphoserine phosphatase (serB)SubName: Full=Phosphoserine phosphatase; SubName: Full=Phosphoserine phosphatase (SerB); chromosome CDS698132 624 - 0.416667
HP0663 chorismate synthase (aroC)RecName: Full=Chorismate synthase; EC=4.2.3.5; AltName: Full=5-enolpyruvylshikimate-3-phosphate phospholyase; chromosome CDS710692 1098 + 0.424408
HP0672 solute-binding signature and mitochondrial signature protein (aspB)SubName: Full=Aspartate aminotransferase; EC=2.6.1.1; SubName: Full=Solute-binding signature and mitochondrial signature protein (AspB); chromosome CDS722299 1173 + 0.432225
HP0695 hydantoin utilization protein A (hyuA)SubName: Full=Hydantoin utilization protein A (HyuA); chromosome CDS745801 2142 + 0.44211
HP0696 N-methylhydantoinaseSubName: Full=N-methylhydantoinase; chromosome CDS747954 2298 + 0.438207
HP0723 L-asparaginase II (ansB)RecName: Full=Probable L-asparaginase; Short=L-ASNase; EC=3.5.1.1; AltName: Full=L-asparagine amidohydrolase; chromosome CDS776481 993 - 0.4572
HP0736 phosphoserine aminotransferase (serC)RecName: Full=Uncharacterized aminotransferase HP_0736; EC=2.6.1.-; chromosome CDS791168 1110 - 0.423423
HP0742 phosphoribosylpyrophosphate synthetase (prsA)RecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; Short=P-Rib-PP synthase; Short=PRPP synthase; chromosome CDS796774 957 + 0.444096
HP0819 osmoprotection protein (proV)SubName: Full=Osmoprotection protein (ProV); chromosome CDS872107 651 + 0.385561
HP0822 homoserine dehydrogenase (metL)RecName: Full=Homoserine dehydrogenase; Short=HDH; EC=1.1.1.3; chromosome CDS875188 1266 + 0.409953
HP0832 spermidine synthase (speE)RecName: Full=Polyamine aminopropyl transferase; AltName: Full=Putrescine aminopropyltransferase; Short=PAPT; AltName: Full=Spermidine synthase; Short=SPDS; Short=SPDSY; EC=2.5.1.16; chromosome CDS884232 789 - 0.362484
HP0860 conserved hypothetical proteinRecName: Full=D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase; EC=3.1.3.82; AltName: Full=D,D-heptose 1,7-bisphosphate phosphatase; Short=HBP phosphatase; chromosome CDS913292 522 - 0.3659
HP0919 carbamoyl-phosphate synthase (glutamine-hydrolysing) (pyrAb)RecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome CDS974161 3258 - 0.424494
HP0936 proline/betaine transporter (proP)SubName: Full=Proline/betaine transporter (ProP); chromosome CDS996532 1170 - 0.383761
HP0939 amino acid ABC transporter, permease protein (yckJ)SubName: Full=Amino acid ABC transporter permease; SubName: Full=Amino acid ABC transporter, permease protein (YckJ); chromosome CDS999607 714 - 0.403361
HP0940 amino acid ABC transporter, periplasmic binding protein (yckK)SubName: Full=Amino acid ABC transporter substrate-binding protein; SubName: Full=Amino acid ABC transporter, periplasmic binding protein (YckK); chromosome CDS1000304 771 - 0.416342
HP0942 D-alanine glycine permease (dagA)SubName: Full=D-alanine glycine permease; SubName: Full=D-alanine glycine permease (DagA); chromosome CDS1002282 1353 - 0.432373
HP0943 D-amino acid dehydrogenase (dadA)RecName: Full=Uncharacterized oxidoreductase HP_0943; EC=1.-.-.-; chromosome CDS1003675 1233 - 0.411192
HP0982 H. pylori predicted coding region HP0982SubName: Full=Uncharacterized protein; chromosome CDS1045509 696 + 0.353448
HP1013 dihydrodipicolinate synthetase (dapA)RecName: Full=4-hydroxy-tetrahydrodipicolinate synthase; Short=HTPA synthase; EC=4.3.3.7; chromosome CDS1076894 903 + 0.429679
HP1017 amino acid permease (rocE)SubName: Full=Amino acid permease (RocE); chromosome CDS1079833 1560 + 0.399359
HP1037 conserved hypothetical proteinRecName: Full=Aminopeptidase HP_1037; EC=3.4.11.-; chromosome CDS1097475 1074 - 0.414339
HP1038 3-dehydroquinase type II (aroQ)RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase; EC=4.2.1.10; AltName: Full=Type II DHQase; chromosome CDS1098562 504 - 0.40873
HP1050 homoserine kinase (thrB)RecName: Full=Homoserine kinase; Short=HK; Short=HSK; EC=2.7.1.39; chromosome CDS1113019 882 - 0.418367
HP1091 alpha-ketoglutarate permease (kgtP)SubName: Full=Alpha-ketoglutarate permease; SubName: Full=Alpha-ketoglutarate permease (KgtP); chromosome CDS1153676 1281 + 0.406714
HP1100 6-phosphogluconate dehydrataseRecName: Full=Phosphogluconate dehydratase; EC=4.2.1.12; AltName: Full=6-phosphogluconate dehydratase; chromosome CDS1160306 1827 - 0.419267
HP1118 gamma-glutamyltranspeptidase (ggt)SubName: Full=Gamma-glutamyltranspeptidase; SubName: Full=Gamma-glutamyltranspeptidase (Ggt); chromosome CDS1182706 1704 - 0.434859
HP1158 pyrroline-5-carboxylate reductase (proC)RecName: Full=Pyrroline-5-carboxylate reductase; Short=P5C reductase; Short=P5CR; EC=1.5.1.2; chromosome CDS1225045 774 + 0.416021
HP1165 tetracycline resistance protein tetA(P), putativeSubName: Full=Tetracycline resistance protein tetA(P); SubName: Full=Tetracycline resistance protein tetA(P), putative; chromosome CDS1229436 1161 - 0.378984
HP1169 glutamine ABC transporter, permease protein (glnP)SubName: Full=Glutamine ABC transporter permease (GlnP); SubName: Full=Glutamine ABC transporter, permease protein (GlnP); chromosome CDS1236572 654 + 0.397554
HP1170 glutamine ABC transporter, permease protein (glnP)SubName: Full=Amino acid ABC transporter permease; SubName: Full=Glutamine ABC transporter, permease protein (GlnP); chromosome CDS1237227 672 + 0.391369
HP1171 glutamine ABC transporter, ATP-binding protein (glnQ)SubName: Full=Glutamine ABC transporter ATP-binding protein; SubName: Full=Glutamine ABC transporter, ATP-binding protein (GlnQ); chromosome CDS1237900 747 + 0.372155
HP1172 glutamine ABC transporter, periplasmic glutamine-binding protein (glnH)SubName: Full=Glutamine ABC transporter periplasmic glutamine-binding protein (GlnH); SubName: Full=Glutamine ABC transporter, periplasmic glutamine-binding protein (GlnH); chromosome CDS1238695 834 + 0.366906
HP1181 multidrug-efflux transporterSubName: Full=Multidrug-efflux transporter; chromosome CDS1249488 1332 + 0.404655
HP1189 aspartate-semialdehyde dehydrogenase (asd)RecName: Full=Aspartate-semialdehyde dehydrogenase; Short=ASA dehydrogenase; Short=ASADH; EC=1.2.1.11; AltName: Full=Aspartate-beta-semialdehyde dehydrogenase; chromosome CDS1259619 1041 - 0.423631
HP1210 serine acetyltransferase (cysE)RecName: Full=Serine acetyltransferase; Short=SAT; EC=2.3.1.30; chromosome CDS1286969 516 - 0.50969
HP1229 aspartokinase (lysC)RecName: Full=Aspartokinase; EC=2.7.2.4; AltName: Full=Aspartate kinase; chromosome CDS1303589 1218 + 0.452381
HP1234 conserved hypothetical integral membrane proteinRecName: Full=Uncharacterized transporter HP_1234; chromosome CDS1308086 897 + 0.404682
HP1237 carbamoyl-phosphate synthetase (pyrAa)RecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS1310863 1128 + 0.428191
HP1243 outer membrane protein (omp28)SubName: Full=Outer membrane protein (Omp28); SubName: Full=Uncharacterized protein; chromosome CDS1317838 2202 - 0.456403
HP1249 shikimate 5-dehydrogenase (aroE)RecName: Full=Shikimate dehydrogenase; EC=1.1.1.25; chromosome CDS1324695 792 - 0.391414
HP1252 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein (oppA)SubName: Full=Oligopeptide ABC transporter periplasmic oligopeptide-binding protein (OppA); SubName: Full=Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein (OppA); chromosome CDS1327124 1785 - 0.397759
HP1277 tryptophan synthase, alpha subunit (trpA)RecName: Full=Tryptophan synthase alpha chain; EC=4.2.1.20; chromosome CDS1352363 789 - 0.391635
HP1278 tryptophan synthase, beta subunit (trpB)RecName: Full=Tryptophan synthase beta chain; EC=4.2.1.20; chromosome CDS1353148 1182 - 0.439932
HP1279 anthranilate isomerase (trpC)RecName: Full=Tryptophan biosynthesis protein TrpCF; Includes: RecName: Full=Indole-3-glycerol phosphate synthase; Short=IGPS; EC=4.1.1.48; Includes: RecName: Full=N-(5-phospho-ribosyl)anthranilate isomerase; Short=PRAI; EC=5.3.1.24; chromosome CDS1354331 1359 - 0.367918
HP1281 anthranilate synthase component II (trpD)RecName: Full=Anthranilate synthase component 2; Short=AS; Short=ASII; EC=4.1.3.27; AltName: Full=Anthranilate synthase, GATase component; AltName: Full=Anthranilate synthase, glutamine amidotransferase component; chromosome CDS1356686 585 - 0.381197
HP1282 anthranilate synthase component I (trpE)RecName: Full=Anthranilate synthase component 1; Short=AS; Short=ASI; EC=4.1.3.27; chromosome CDS1357267 1503 - 0.413174
HP1330 conserved hypothetical integral membrane proteinRecName: Full=Uncharacterized protein HP_1330; chromosome CDS1391527 348 - 0.373563
HP1331 conserved hypothetical integral membrane proteinRecName: Full=Uncharacterized membrane protein HP_1331; chromosome CDS1391868 687 - 0.403202
HP1380 prephenate dehydrogenase (tyrA)SubName: Full=Prephenate dehydrogenase (TyrA); chromosome CDS1444944 798 + 0.423559
HP1398 alanine dehydrogenase (ald)SubName: Full=Alanine dehydrogenase; SubName: Full=Alanine dehydrogenase (Ald); chromosome CDS1458582 1143 - 0.445319
HP1399 arginase (rocF)SubName: Full=Arginase; SubName: Full=Arginase (RocF); chromosome CDS1459926 969 + 0.397317
HP1468 branched-chain-amino-acid aminotransferase (ilvE)RecName: Full=Branched-chain-amino-acid aminotransferase; Short=BCAT; EC=2.6.1.42; chromosome CDS1538762 1023 - 0.454545
HP1506 glutamate permease (gltS)SubName: Full=Glutamate permease (GltS); chromosome CDS1578968 1227 - 0.436838
HP1507 conserved hypothetical ATP-binding proteinSubName: Full=Conserved hypothetical ATP-binding protein; chromosome CDS1580322 1158 + 0.417098
HP1513 selenocysteine synthase SelA, putativeRecName: Full=L-seryl-tRNA(Sec) selenium transferase; EC=2.9.1.1; AltName: Full=Selenocysteine synthase; Short=Sec synthase; AltName: Full=Selenocysteinyl-tRNA(Sec) synthase; chromosome CDS1587307 1161 + 0.365202
HP1531 H. pylori predicted coding region HP1531RecName: Full=Uncharacterized protein HP_1531; chromosome CDS1609735 240 + 0.341667
HP1566 H. pylori predicted coding region HP1566SubName: Full=Uncharacterized protein; chromosome CDS1649015 444 - 0.317568