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2024-05-02 23:12:24

Gene list

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COG category: Amino acid transport and metabolism
Organism: Helicobacter pylori 26695, 26695

Number of genes found: 102

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Helicobacter pylori 26695, 26695
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
HP0020 carboxynorspermidine decarboxylase (nspC)chromosome CDS19342 1218 + 0.42775
HP0049 H. pylori predicted coding region HP0049chromosome CDS48291 993 - 0.401813
HP0055 proline permease (putP)chromosome CDS56224 1491 - 0.425889
HP0072 urease beta subunit (urea amidohydrolase) (ureB)chromosome CDS75527 1710 - 0.442105
HP0073 urease alpha subunit (ureA) (urea amidohydrolase)chromosome CDS77240 717 - 0.41841
HP0098 threonine synthase (thrC)chromosome CDS102461 1461 - 0.405202
HP0106 cystathionine gamma-synthase (metB)chromosome CDS113333 1143 - 0.475066
HP0107 cysteine synthetase (cysK)chromosome CDS114500 921 - 0.465798
HP0132 L-serine deaminase (sdaA)chromosome CDS142227 1368 - 0.432749
HP0133 serine transporter (sdaC)chromosome CDS143594 1242 - 0.387279
HP0134 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (dhs1)chromosome CDS145016 1350 + 0.456296
HP0157 shikimic acid kinase I (aroK)chromosome CDS166150 489 + 0.390593
HP0183 serine hydroxymethyltransferase (glyA)chromosome CDS190186 1251 + 0.411671
HP0212 succinyl-diaminopimelate desuccinylase (dapE)chromosome CDS219098 1152 - 0.41059
HP0220 synthesis of [Fe-S] cluster (nifS)chromosome CDS228339 1164 + 0.449313
HP0233 conserved hypothetical proteinchromosome CDS242677 1173 + 0.404092
HP0283 3-dehydroquinate synthase (aroB)chromosome CDS291465 1032 + 0.379845
HP0290 diaminopimelate decarboxylase (dap decarboxylase) (lysA)chromosome CDS306753 1218 + 0.415435
HP0291 H. pylori predicted coding region HP0291chromosome CDS307975 291 + 0.323024
HP0293 para-aminobenzoate synthetase (pabB)chromosome CDS309151 1680 + 0.361905
HP0298 dipeptide ABC transporter, periplasmic dipeptide-binding protein (dppA)chromosome CDS315585 1650 + 0.411515
HP0299 dipeptide ABC transporter, permease protein (dppB)chromosome CDS317245 1005 + 0.439801
HP0300 dipeptide ABC transporter, permease protein (dppC)chromosome CDS318249 858 + 0.454545
HP0301 dipeptide ABC transporter, ATP-binding protein (dppD)chromosome CDS319118 864 + 0.425926
HP0302 dipeptide ABC transporter, ATP-binding protein (dppF)chromosome CDS319978 807 + 0.42627
HP0313 nitrite extrusion protein (narK)chromosome CDS328947 1146 - 0.408377
HP0330 ketol-acid reductoisomerase (ilvC)chromosome CDS345554 993 + 0.417925
HP0344 H. pylori predicted coding region HP0344chromosome CDS352310 465 + 0.423656
HP0380 glutamate dehydrogenase (gdhA)chromosome CDS390125 1347 - 0.439495
HP0383 H. pylori predicted coding region HP0383chromosome CDS393770 525 + 0.367619
HP0397 phosphoglycerate dehydrogenase (serA)chromosome CDS407264 1575 - 0.413968
HP0401 3-phosphoshikimate 1-carboxyvinyltransferase (aroA)chromosome CDS412036 1290 - 0.395349
HP0405 nifS-like proteinchromosome CDS417035 1323 + 0.415722
HP0422 arginine decarboxylase (speA)chromosome CDS436282 1848 + 0.406385
HP0470 oligoendopeptidase F (pepF)chromosome CDS490975 1737 - 0.385723
HP0510 dihydrodipicolinate reductase (dapB)chromosome CDS536612 765 + 0.418301
HP0512 glutamine synthetase (glnA)chromosome CDS538237 1446 - 0.421853
HP0529 cag pathogenicity island protein (cag9)chromosome CDS561625 1608 - 0.361318
HP0566 diaminopimelate epimerase (dapF)chromosome CDS598047 822 - 0.391728
HP0570 aminopeptidase a/i (pepA)chromosome CDS602181 1491 - 0.404427
HP0586 H. pylori predicted coding region HP0586chromosome CDS616194 2934 - 0.350034
HP0624 solute-binding signature and mitochondrial signature protein (aspB)chromosome CDS670363 1128 - 0.396277
HP0626 tetrahydrodipicolinate N-succinyltransferase (dapD)chromosome CDS672692 1206 + 0.40796
HP0649 aspartate ammonia-lyase (aspA)chromosome CDS694612 1407 + 0.439232
HP0652 phosphoserine phosphatase (serB)chromosome CDS698132 624 - 0.416667
HP0663 chorismate synthase (aroC)chromosome CDS710692 1098 + 0.424408
HP0672 solute-binding signature and mitochondrial signature protein (aspB)chromosome CDS722299 1173 + 0.432225
HP0695 hydantoin utilization protein A (hyuA)chromosome CDS745801 2142 + 0.44211
HP0696 N-methylhydantoinasechromosome CDS747954 2298 + 0.438207
HP0723 L-asparaginase II (ansB)chromosome CDS776481 993 - 0.4572
HP0736 phosphoserine aminotransferase (serC)chromosome CDS791168 1110 - 0.423423
HP0742 phosphoribosylpyrophosphate synthetase (prsA)chromosome CDS796774 957 + 0.444096
HP0819 osmoprotection protein (proV)chromosome CDS872107 651 + 0.385561
HP0822 homoserine dehydrogenase (metL)chromosome CDS875188 1266 + 0.409953
HP0832 spermidine synthase (speE)chromosome CDS884232 789 - 0.362484
HP0860 conserved hypothetical proteinchromosome CDS913292 522 - 0.3659
HP0919 carbamoyl-phosphate synthase (glutamine-hydrolysing) (pyrAb)chromosome CDS974161 3258 - 0.424494
HP0936 proline/betaine transporter (proP)chromosome CDS996532 1170 - 0.383761
HP0939 amino acid ABC transporter, permease protein (yckJ)chromosome CDS999607 714 - 0.403361
HP0940 amino acid ABC transporter, periplasmic binding protein (yckK)chromosome CDS1000304 771 - 0.416342
HP0942 D-alanine glycine permease (dagA)chromosome CDS1002282 1353 - 0.432373
HP0943 D-amino acid dehydrogenase (dadA)chromosome CDS1003675 1233 - 0.411192
HP0982 H. pylori predicted coding region HP0982chromosome CDS1045509 696 + 0.353448
HP1013 dihydrodipicolinate synthetase (dapA)chromosome CDS1076894 903 + 0.429679
HP1017 amino acid permease (rocE)chromosome CDS1079833 1560 + 0.399359
HP1037 conserved hypothetical proteinchromosome CDS1097475 1074 - 0.414339
HP1038 3-dehydroquinase type II (aroQ)chromosome CDS1098562 504 - 0.40873
HP1050 homoserine kinase (thrB)chromosome CDS1113019 882 - 0.418367
HP1091 alpha-ketoglutarate permease (kgtP)chromosome CDS1153676 1281 + 0.406714
HP1100 6-phosphogluconate dehydratasechromosome CDS1160306 1827 - 0.419267
HP1118 gamma-glutamyltranspeptidase (ggt)chromosome CDS1182706 1704 - 0.434859
HP1158 pyrroline-5-carboxylate reductase (proC)chromosome CDS1225045 774 + 0.416021
HP1165 tetracycline resistance protein tetA(P), putativechromosome CDS1229436 1161 - 0.378984
HP1169 glutamine ABC transporter, permease protein (glnP)chromosome CDS1236572 654 + 0.397554
HP1170 glutamine ABC transporter, permease protein (glnP)chromosome CDS1237227 672 + 0.391369
HP1171 glutamine ABC transporter, ATP-binding protein (glnQ)chromosome CDS1237900 747 + 0.372155
HP1172 glutamine ABC transporter, periplasmic glutamine-binding protein (glnH)chromosome CDS1238695 834 + 0.366906
HP1181 multidrug-efflux transporterchromosome CDS1249488 1332 + 0.404655
HP1189 aspartate-semialdehyde dehydrogenase (asd)chromosome CDS1259619 1041 - 0.423631
HP1210 serine acetyltransferase (cysE)chromosome CDS1286969 516 - 0.50969
HP1229 aspartokinase (lysC)chromosome CDS1303589 1218 + 0.452381
HP1234 conserved hypothetical integral membrane proteinchromosome CDS1308086 897 + 0.404682
HP1237 carbamoyl-phosphate synthetase (pyrAa)chromosome CDS1310863 1128 + 0.428191
HP1243 outer membrane protein (omp28)chromosome CDS1317838 2202 - 0.456403
HP1249 shikimate 5-dehydrogenase (aroE)chromosome CDS1324695 792 - 0.391414
HP1252 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein (oppA)chromosome CDS1327124 1785 - 0.397759
HP1277 tryptophan synthase, alpha subunit (trpA)chromosome CDS1352363 789 - 0.391635
HP1278 tryptophan synthase, beta subunit (trpB)chromosome CDS1353148 1182 - 0.439932
HP1279 anthranilate isomerase (trpC)chromosome CDS1354331 1359 - 0.367918
HP1281 anthranilate synthase component II (trpD)chromosome CDS1356686 585 - 0.381197
HP1282 anthranilate synthase component I (trpE)chromosome CDS1357267 1503 - 0.413174
HP1330 conserved hypothetical integral membrane proteinchromosome CDS1391527 348 - 0.373563
HP1331 conserved hypothetical integral membrane proteinchromosome CDS1391868 687 - 0.403202
HP1380 prephenate dehydrogenase (tyrA)chromosome CDS1444944 798 + 0.423559
HP1398 alanine dehydrogenase (ald)chromosome CDS1458582 1143 - 0.445319
HP1399 arginase (rocF)chromosome CDS1459926 969 + 0.397317
HP1468 branched-chain-amino-acid aminotransferase (ilvE)chromosome CDS1538762 1023 - 0.454545
HP1506 glutamate permease (gltS)chromosome CDS1578968 1227 - 0.436838
HP1507 conserved hypothetical ATP-binding proteinchromosome CDS1580322 1158 + 0.417098
HP1513 selenocysteine synthase SelA, putativechromosome CDS1587307 1161 + 0.365202
HP1531 H. pylori predicted coding region HP1531chromosome CDS1609735 240 + 0.341667
HP1566 H. pylori predicted coding region HP1566chromosome CDS1649015 444 - 0.317568