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2024-05-19 07:53:01

Gene list

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COG category: Energy production and conversion
Genomic element: chromosome

Number of genes found: 192

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Yersinia pestis biovar Medievalis str. 91001, 91001
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YP0599 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductaseschromosome CDS639625 1056 - 0.53125
NA YP2043 putative iron-sulfur proteinchromosome CDS2268210 567 - 0.537919
NA YP0659 Acyl-CoA synthetase (NDP forming)chromosome CDS711654 2643 - 0.521377
NA YP2993 putative iron-containing alcohol dehydrogenasechromosome CDS3331556 1158 - 0.513817
NA YP1692 putative cytochrome precursorchromosome CDS1866767 315 + 0.457143
NA YP0980 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductaseschromosome CDS1055053 228 - 0.526316
NA YP3488 conserved hypothetical proteinchromosome CDS3967127 273 - 0.413919
NA YP3564 putative membrane proteinchromosome CDS4058612 780 - 0.351282
NA YP0523 putative iron-sulfur cluster-binding proteinchromosome CDS560137 1236 - 0.512136
NA YP1176 putative iron-sulfur binding proteinchromosome CDS1265574 1113 + 0.487871
NA YP3850 putative cytochromechromosome CDS4376544 393 - 0.486005
NA YP4013 hypothetical proteinchromosome CDS4567621 621 - 0.351047
NA YP2787 putative cytochromechromosome CDS3095245 318 - 0.477987
NA YP2045 putative membrane proteinchromosome CDS2269485 444 - 0.468468
aCH1 YP1668 putative 4-hydroxybutyrate coenzyme A transferasechromosome CDS1840233 1323 - 0.504157
aceA YP3087 isocitrate lyasechromosome CDS3430636 1308 - 0.512997
aceB YP3088 malate synthase Achromosome CDS3431990 1632 - 0.479779
aceE YP0265 pyruvate dehydrogenase E1 componentchromosome CDS268258 2664 + 0.495871
aceF YP0266 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complexchromosome CDS270935 1530 + 0.51634
ackA YP2377 acetate kinasechromosome CDS2643825 1203 + 0.504572
acnA YP2019 aconitate hydratase 1chromosome CDS2242425 2673 + 0.48859
acnB YP0270 aconitate hydratase 2chromosome CDS275465 2598 + 0.51963
acyP YP1337 Acylphosphataseschromosome CDS1465708 285 + 0.519298
adhC YP1392 probable alcohol dehydrogenasechromosome CDS1533825 1140 - 0.515789
adhE YP1976 aldehyde-alcohol dehydrogenasechromosome CDS2198473 2676 - 0.468984
araB1 YP2050 L-ribulokinasechromosome CDS2277763 1704 - 0.53169
araB2 YP3910 putative carbohydrate kinasechromosome CDS4445279 1653 - 0.521476
astD YP1709 succinylglutamic semialdehyde dehydrogenasechromosome CDS1888803 1518 + 0.535573
atpA YP4030 ATP synthase alpha subunit proteinchromosome CDS4587211 1542 - 0.499352
atpB YP4034 ATP synthase subunit B proteinchromosome CDS4590136 825 - 0.460606
atpC YP4027 ATP synthase epsilon subunit proteinchromosome CDS4584304 423 - 0.496454
atpD YP4028 ATP synthase beta subunit proteinchromosome CDS4584748 1383 - 0.498192
atpE YP4033 ATP synthase subunit C proteinchromosome CDS4589847 240 - 0.520833
atpF YP4032 ATP synthase subunit B proteinchromosome CDS4589315 471 - 0.492569
atpG YP4029 ATP synthase gamma subunit proteinchromosome CDS4586286 864 - 0.509259
atpH YP4031 ATP synthase delta subunit proteinchromosome CDS4588767 534 - 0.494382
atpI YP4035 ATP synthase protein Ichromosome CDS4591000 450 - 0.473333
betB YP0993 betaine aldehyde dehydrogenasechromosome CDS1070680 1473 + 0.540394
bisC YP2863 putative biotin sulfoxide reductas2chromosome CDS3176684 2262 + 0.519894
ccmG YP2424 thiol:disulfide interchange protein DsbEchromosome CDS2694617 567 - 0.499118
cybB1 YP0365 probable cytochrome B561chromosome CDS385448 564 - 0.469858
cybB2 YP2103 putative membrane proteinchromosome CDS2343520 555 - 0.445045
cybB3 YP2599 putative cytochromechromosome CDS2880801 600 - 0.451667
cybC YP0366 putative cytochrome B562chromosome CDS386126 384 - 0.398438
cydA YP1039 cytochrome D ubiquinol oxidase subunit Ichromosome CDS1117376 1569 - 0.474825
cydB YP1038 cytochrome D ubiquinol oxidase subunit IIchromosome CDS1116222 1140 - 0.484211
cydC YP1221 transport ATP-binding proteinchromosome CDS1334233 1725 + 0.516522
cydD YP1220 transport ATP-binding proteinchromosome CDS1332446 1785 + 0.505882
cyoA YP0767 cytochrome O ubiquinol oxidase subunit IIchromosome CDS826932 957 - 0.447231
cyoB YP0766 cytochrome O ubiquinol oxidase subunit Ichromosome CDS824936 1992 - 0.49247
cyoC YP0765 cytochrome O ubiquinol oxidase subunit IIIchromosome CDS824332 615 - 0.486179
cyoD YP0764 cytochrome O ubiquinol oxidase subunit CyoDchromosome CDS824000 333 - 0.438438
dctA YP3355 C4-dicarboxylate transport proteinchromosome CDS3757136 1290 - 0.467442
ddhD YP0814 cdp-6-deoxy-delta-3,4-glucoseen reductasechromosome CDS880228 990 + 0.374747
dld YP0960 D-lactate dehydrogenasechromosome CDS1034987 1716 + 0.455711
dmsA1 YP0361 anaerobic dimethyl sulfoxide reductase subunit Achromosome CDS380373 2472 + 0.524676
dmsA2 YP2590 putative dimethyl sulfoxide reductase chain A proteinchromosome CDS2872219 2463 + 0.471376
dmsB1 YP0362 anaerobic dimethyl sulfoxide reductase chain Bchromosome CDS382856 618 + 0.503236
dmsB2 YP2591 putative dimethyl sulfoxide reductase chain B proteinchromosome CDS2874693 618 + 0.508091
dsbA YP0017 secreted thiol:disulfide interchange protein DsbAchromosome CDS21601 624 + 0.421474
dsbD YP0499 thiol:disulfide interchange proteinchromosome CDS535824 1788 - 0.521812
eutG YP0482 probable alcohol dehydrogenasechromosome CDS516867 1149 - 0.510879
fadI YP3280 NAD(P)H-flavin reductasechromosome CDS3656455 744 + 0.486559
fdhD YP3971 putative formate dehydrogenasechromosome CDS4519958 858 + 0.532634
fdhF YP0498 formate dehydrogenase Hchromosome CDS533615 2148 + 0.53352
fdoH YP3969 formate dehydrogenase-O, iron-sulfur subunitchromosome CDS4515763 972 - 0.539095
fdoI YP3968 formate dehydrogenase, cytochrome b556 proteinchromosome CDS4515092 675 - 0.505185
fdx1 YP0925 adrenodoxin family ferredoxinchromosome CDS997014 258 + 0.492248
fdx2 YP2564 putative [4Fe-4S] ferredoxinchromosome CDS2837741 336 + 0.514881
fldA1 YP0001 putative flavoproteinchromosome CDS21 441 - 0.428571
fldA2 YP1080 flavodoxin 1chromosome CDS1154587 528 + 0.471591
fldA3 YP2812 Flavodoxinschromosome CDS3123288 450 - 0.495556
fldB YP3589 flavodoxin 2chromosome CDS4082919 582 + 0.455326
fpr YP0092 ferredoxin--NADP reductasechromosome CDS100379 747 - 0.519411
frdA YP0515 fumarate reductase flavoprotein subunitchromosome CDS549427 1824 - 0.529057
frdB YP0514 fumarate reductase iron-sulfur proteinchromosome CDS548700 735 - 0.493878
frdC YP0513 fumarate reductase hydrophobic proteinchromosome CDS548291 393 - 0.480916
frdD YP0512 fumarate reductase hydrophobic proteinchromosome CDS547918 357 - 0.498599
fumA YP0352 fumarate hydratase, class Ichromosome CDS368229 1644 - 0.508516
fumC YP2061 fumarate hydratase, class IIchromosome CDS2291083 1446 + 0.483402
gabD1 YP1301 putative aldehyde dehydrogenasechromosome CDS1424168 1497 - 0.569806
gabD2 YP3856 chromosome pseudo4381517 1134 - 0.529982
galT YP1021 galactose-1-phosphate uridylyltransferasechromosome CDS1099578 1053 + 0.520418
glcD1 YP0464 putative oxidoreductasechromosome CDS490646 2058 + 0.480564
glcD2 YP1343 putative oxidoreductasechromosome CDS1471979 2430 - 0.498354
glcD3 YP2194 FAD/FMN-containing dehydrogenaseschromosome CDS2439417 3057 - 0.506706
gldA YP1444 putative dehydrogenasechromosome CDS1597129 1092 + 0.549451
glpA YP3222 anaerobic glycerol-3-phosphate dehydrogenase subunit Achromosome CDS3595719 1656 + 0.539855
glpC YP3224 anaerobic glycerol-3-phosphate dehydrogenase subunit Cchromosome CDS3598680 1251 + 0.486811
glpD YP3299 aerobic glycerol-3-phosphate dehydrogenase.chromosome CDS3679608 1599 + 0.524078
glpK1 YP0094 glycerol kinasechromosome CDS102527 1524 - 0.520341
glpK2 YP0374 glycerol kinasechromosome CDS395667 1488 + 0.565188
glpQ YP3221 glycerophosphoryl diester phosphodiesterasechromosome CDS3593979 1119 - 0.453083
gltA YP1048 citrate synthase GltAchromosome CDS1130251 1281 + 0.485558
gltP YP0407 proton glutamate symport proteinchromosome CDS433307 1269 + 0.437352
gor YP3340 glutathione oxidoreductasechromosome CDS3736780 1383 + 0.518438
gpsA YP0068 glycerol-3-phosphate dehydrogenasechromosome CDS78014 1020 + 0.515686
hcp2 YP1235 putative prismane protein homologuechromosome CDS1349406 1653 + 0.507562
hcr YP1236 putative oxidoreductasechromosome CDS1351124 1071 + 0.530345
hemG YP3286 protoporphyrinogen oxidasechromosome CDS3664504 534 + 0.428839
hmp1 YP2307 putative dioxygenase beta subunitchromosome CDS2566268 966 - 0.467909
hmp2 YP2547 flavohemoproteinchromosome CDS2821514 1191 - 0.468514
hpaE YP1630 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenasechromosome CDS1779404 1398 - 0.527182
hydN YP0497 4Fe-4S ferrodoxinchromosome CDS533035 558 + 0.560932
icdA YP1771 isocitrate dehydrogenase [NADP]chromosome CDS1962414 1305 + 0.457471
ldhA1 YP2115 D-lactate dehydrogenasechromosome CDS2358455 1050 + 0.449524
ldhA2 YP2347 putative D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS2610579 951 - 0.480547
ldhA3 YP3988 putative D-isomer specific 2-hydroxyaciddehydrogenasechromosome CDS4538925 1017 + 0.509341
leuB1 YP2311 tartrate dehydrogenasechromosome CDS2570833 1098 - 0.496357
leuB2 YP3650 3-isopropylmalate dehydrogenasechromosome CDS4150948 1098 + 0.509107
lldD YP1457 L-lactate dehydrogenasechromosome CDS1614070 1146 + 0.550611
lpd YP3131 putative pyridine nucleotide-disulphide oxidoreductasechromosome CDS3490271 1464 - 0.51776
lpdA YP0268 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complexchromosome CDS272767 1428 + 0.488095
mdaB2 YP1850 putative exported proteinchromosome CDS2061062 708 + 0.450565
mdh YP0567 malate dehydrogenasechromosome CDS607980 939 + 0.477103
napA YP2661 periplasmic nitrate reductase precursorchromosome CDS2949571 2493 - 0.530285
napB YP2660 cytochrome C-type protein NapB precursorchromosome CDS2949021 402 - 0.524876
napC YP2659 cytochrome C-type protein NapCchromosome CDS2948394 618 - 0.462783
napF1 YP2528 Ferredoxin 2chromosome CDS2798575 261 - 0.452107
napF2 YP2594 putative iron-sulphur proteinchromosome CDS2877163 570 + 0.522807
napF3 YP2663 ferredoxin-type protein NapFchromosome CDS2952316 504 - 0.529762
ndh YP2237 NADH dehydrogenasechromosome CDS2484922 1305 - 0.482759
nemA1 YP0982 NADH:flavin oxidoreductases, Old Yellow Enzyme familychromosome CDS1056747 1110 - 0.504505
nemA2 YP2165 NADH:flavin oxidoreductase / NADH oxidase familyproteinchromosome CDS2408402 1098 + 0.509107
nfnB YP1963 putative nitroreductasechromosome CDS2182316 552 + 0.509058
nhaC YP2941 putative membrane proteinchromosome CDS3278232 1452 + 0.435262
nifJ YP2120 putative pyruvate-flavodoxin oxidoreductasechromosome CDS2362240 3534 + 0.509904
nifU YP2559 NifU family proteinchromosome CDS2833944 387 + 0.465116
nirB YP0163 nitrite reductasechromosome CDS175687 2547 - 0.516294
nqrA1 YP0693 NADH-ubiquinone oxidoreductase subunit Achromosome CDS751735 1428 + 0.505602
nqrA2 YP2042 putative iron-sulfur binding NADH dehydrogenasechromosome CDS2266181 1980 - 0.526768
nqrB1 YP0694 NADH-ubiquinone oxidoreductase subunit Bchromosome CDS753166 1242 + 0.491948
nqrB2 YP2040 putative integral membrane proteinchromosome CDS2263588 1158 - 0.503454
nqrC1 YP0695 Na+-translocating NADH-quinone reductase subunit Cchromosome CDS754340 858 + 0.496504
nqrC2 YP2039 putative exported proteinchromosome CDS2262949 630 - 0.495238
nqrD1 YP0696 Na+-translocating NADH-quinone reductase subunit Dchromosome CDS755190 630 + 0.465079
nqrD2 YP2038 putative membrane proteinchromosome CDS2262251 702 - 0.497151
nqrE1 YP0697 Na+-translocating NADH-quinone reductase subunit Echromosome CDS755820 603 + 0.477612
nqrE2 YP1677 putative oxidoreductasechromosome CDS1848881 624 - 0.411859
nqrE3 YP2044 putative membrane proteinchromosome CDS2268776 645 - 0.494574
nqrF YP0698 NADH-uniquinone oxidoreductase subunit Fchromosome CDS756438 1224 + 0.455065
nuoA YP2366 NADH dehydrogenase I chain Achromosome CDS2633922 501 - 0.499002
nuoB YP2365 NADH dehydrogenase I chain Bchromosome CDS2633143 678 - 0.50295
nuoD YP2364 NADH dehydrogenase I chain C/Dchromosome CDS2631206 1797 - 0.514747
nuoE YP2363 NADH dehydrogenase I chain Echromosome CDS2630640 564 - 0.54078
nuoF YP2362 NADH dehydrogenase I chain Fchromosome CDS2629258 1386 - 0.538961
nuoG YP2361 NADH dehydrogenase I chain Gchromosome CDS2626427 2745 - 0.542077
nuoH YP2360 NADH dehydrogenase I chain Hchromosome CDS2625453 978 - 0.51636
nuoI YP2359 NADH Dehydrogenase I chain Ichromosome CDS2624896 543 - 0.517495
nuoJ YP2358 NADH dehydrogenase I chain Jchromosome CDS2624338 546 - 0.516484
nuoK YP2357 NADH dehydrogenase i chain kchromosome CDS2624039 303 - 0.551155
nuoL YP2356 NADH dehydrogenase I chain Lchromosome CDS2622198 1800 - 0.545556
nuoM YP2355 NADH dehydrogenase I chain Mchromosome CDS2620626 1533 - 0.514025
nuoN YP2354 NADH dehydrogenase I chain Nchromosome CDS2619156 1464 - 0.538251
pckA YP0139 phosphoenolpyruvate carboxykinase [ATP]chromosome CDS151624 1620 - 0.495679
pflB YP1210 formate acetyltransferase 1chromosome CDS1315637 2355 + 0.478556
pntA YP2088 NAD(P) transhydrogenase alpha subunitchromosome CDS2326546 1527 - 0.513425
pntB YP2087 NAD(P) transhydrogenase subunit betachromosome CDS2325079 1395 - 0.481004
ppa YP0562 inorganic pyrophosphatasechromosome CDS602805 528 - 0.467803
ppc YP3121 phosphoenolpyruvate carboxylasechromosome CDS3474075 2697 - 0.523915
prk YP0177 phosphoribulokinase 1chromosome CDS195913 906 - 0.498896
putA1 YP1137 putative aldehyde dehydrogenasechromosome CDS1220645 1527 - 0.571709
putA2 YP1542 bifunctional PutA protein [includes: proline dehydrogenase and delta-1-pyrroline-5-carboxylatechromosome CDS1690681 3957 + 0.528178
qor1 YP0474 quinone oxidoreductasechromosome CDS506188 1053 - 0.540361
qor2 YP1784 probable Zinc-binding dehydrogenasechromosome CDS1974897 1047 - 0.503343
qor3 YP3883 probable zinc-binding dehydrogenasechromosome CDS4420396 978 + 0.522495
sdhA YP1045 succinate dehydrogenase flavoprotein subunitchromosome CDS1127044 1767 - 0.512733
sdhB YP1044 succinate dehydrogenase iron-sulfur proteinchromosome CDS1126278 717 - 0.467225
sdhC YP1047 succinate dehydrogenase cytochrome b-556 subunitchromosome CDS1129152 390 - 0.458974
sdhD YP1046 succinate dehydrogenase hydrophobic membrane anchor proteinchromosome CDS1128811 348 - 0.456897
sfcA1 YP1401 NAD-dependent malic enzymechromosome CDS1545445 1698 - 0.482332
sfcA2 YP2657 putative multimodular enzymechromosome CDS2945138 2280 - 0.511842
ssuD YP3922 alkanesulfonate monooxygenasechromosome CDS4461079 1149 - 0.543951
sthA YP3134 soluble pyridine nucleotide transhydrogenasechromosome CDS3493607 1401 - 0.484654
sucA YP1043 2-oxoglutarate dehydrogenase E1 componentchromosome CDS1123115 2808 - 0.49359
sucB YP1042 dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complexchromosome CDS1121862 1224 - 0.487745
sucC YP1041 succinyl-CoA synthetase beta chainchromosome CDS1120583 1167 - 0.509854
sucD YP1040 succinyl-CoA synthetase alpha chainchromosome CDS1119711 873 - 0.4811
tas1 YP1163 putative aldo/keto reductasechromosome CDS1251717 993 + 0.52568
tas2 YP2280 putative oxidoreductasechromosome CDS2529209 1020 + 0.471569
tas3 YP2605 putative ion channel proteinchromosome CDS2887103 990 + 0.487879
tas4 YP2868 putative aldo/keto reductase-family proteinchromosome CDS3183736 1041 - 0.501441
trxA1 YP1691 putative thioredoxin-family proteinchromosome CDS1866240 531 + 0.468927
trxA2 YP3177 thioredoxin 1chromosome CDS3545676 327 + 0.461774
trxC YP0661 thioredoxin 2chromosome CDS715258 438 - 0.502283
ubiF YP1092 putative2-octaprenyl-3-methyl-6-methoxy-1,4-benz oquinolhydroxylasechromosome CDS1173326 1182 - 0.534687
ubiH YP3606 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS4102986 1179 - 0.550466
ugpQ1 YP0701 putative exported proteinchromosome CDS759208 948 - 0.407173
ugpQ2 YP1872 putative exported proteinchromosome CDS2081587 876 - 0.430365
ugpQ3 YP1878 Glycerophosphoryl diester phosphodiesterasechromosome CDS2087551 831 + 0.527076
ugpQ4 YP3257 glycerophosphoryl diester phosphodiesterasechromosome CDS3631195 750 + 0.545333
visC YP3605 putative monooxygenasechromosome CDS4101593 1437 - 0.537926