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2024-05-19 01:01:39

Gene list

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COG category: Energy production and conversion
Genomic element: chromosome 1

Number of genes found: 195

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Rhodobacter sphaeroides 2.4.1, 2.4.1; ATCC BAA-808
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RSP_2477 conserved hypothetical proteinchromosome 1 CDS1115118 885 + 0.665537
NA RSP_0177 FAD/FMN-containing dehydrogenaseschromosome 1 CDS1894242 1383 + 0.709328
NA RSP_2307 probable manganese-dependent inorganic pyrophosphatasechromosome 1 CDS929740 918 - 0.653595
NA RSP_1563 putative oxidoreductasechromosome 1 CDS152758 1008 - 0.723214
NA RSP_1939 NADPH-ferredoxin reductasechromosome 1 CDS538127 807 - 0.641883
NA RSP_0351 D-threo-aldose 1-dehydrogenasechromosome 1 CDS2081929 1065 + 0.700469
NA RSP_2661 Iron-containing alcohol dehydrogenasechromosome 1 CDS1302865 1143 - 0.765529
NA RSP_2354 hypothetical proteinchromosome 1 CDS980904 423 - 0.718676
NA RSP_0306 Class I diheme cytochrome cchromosome 1 CDS2036968 873 + 0.697595
NA RSP_1492 UbiH/COQ6 monooxygenase familychromosome 1 CDS76263 1230 - 0.738211
NA RSP_0115 Class I triheme cytochrome cchromosome 1 CDS1828582 1245 - 0.740562
NA RSP_2807 putative cytochrome bchromosome 1 CDS1507335 639 + 0.713615
NA RSP_1510 Putative glycerol-3-phosphate dehydrogenase (NAD(P)+)chromosome 1 CDS97683 918 + 0.745098
NA RSP_1463 Putative acyl-CoA transferase/carnitine dehydratasechromosome 1 CDS49222 1146 - 0.704188
NA RSP_2372 aldehyde dehydrogenase (NAD-dependent)chromosome 1 CDS998596 1419 + 0.710359
NA RSP_2313 D-isomer specific 2-hydroxyacid dehydrogenasechromosome 1 CDS935222 987 + 0.68997
NA RSP_1294 possible 2-oxoisovalerate dehydrogenase; E1 component, alpha and beta subunitchromosome 1 CDS3062247 2184 - 0.703755
NA RSP_1254 putative acetate kinase (acetokinasechromosome 1 CDS3021856 1191 - 0.713686
NA RSP_0534 putative dimeric ferredoxin (FdIII)chromosome 1 CDS2270856 303 - 0.617162
NA RSP_2022 Cytochrome b/diheme cytochrome c hybrid proteinchromosome 1 CDS622010 1092 - 0.729853
NA RSP_0423 Aldo/keto reductasechromosome 1 CDS2154649 1041 - 0.696446
NA RSP_2793 Putative reductase component of monooxygenasechromosome 1 CDS1528302 1098 - 0.632969
NA RSP_0615 Putative oxidoreductasechromosome 1 CDS2352823 918 - 0.659041
NA RSP_1593 NAD dependent malic enzymechromosome 1 CDS186833 2280 - 0.68114
NA RSP_0133 Na+/H+ antiporter, NhaC familychromosome 1 CDS1846786 1491 + 0.671362
NA RSP_0962 Dihydrolipoamide dehydrogenasechromosome 1 CDS2721358 1389 - 0.673146
NA RSP_1434 Putative Zn-dependent oxidoreductasechromosome 1 CDS12843 981 - 0.673802
NA RSP_0118 Cytochrome c oxidase, subunit IIcchromosome 1 CDS1832840 975 - 0.705641
NA RSP_0820 Putative cytochrome B561chromosome 1 CDS2566383 510 + 0.672549
NA RSP_1869 Putative oxidoreductase proteinchromosome 1 CDS466677 1200 - 0.721667
NA RSP_0029 acetyl-CoA hydrolase/transferase family proteinchromosome 1 CDS1730543 1500 + 0.671333
NA RSP_0895 phosphodiesterase-likechromosome 1 CDS2646151 771 + 0.741894
NA RSP_0725 Thioredoxin, thioldisulfide interchange proteinchromosome 1 CDS2469725 552 - 0.713768
NA RSP_0195 NADH-ubiquinone oxidoreductase 17.2 kD subunitchromosome 1 CDS1910711 375 - 0.664
NA RSP_1835 Putative FAD dependent oxidoreductasechromosome 1 CDS426908 1422 + 0.732068
NA RSP_1777 Putative electron transfer flavoprotein-ubiquinone oxidoreductase precursorchromosome 1 CDS360800 1656 + 0.650362
NA RSP_0352 probable ferredoxinchromosome 1 CDS2083151 324 - 0.635802
NA RSP_2876 putative carbon monoxide dehydrogenase medium chainchromosome 1 CDS1545836 786 - 0.711196
NA RSP_2968 Probable dihydrolipoamide dehydrogenasechromosome 1 CDS1652437 1407 - 0.672353
NA RSP_1143 4Fe-4S ferredoxin, iron-sulfur cluster binding proteinchromosome 1 CDS2903878 1047 - 0.712512
NA RSP_0175 Lactate dehydrogenase and related dehydrogenaseschromosome 1 CDS1891185 942 + 0.708068
NA RSP_1019 putative glycolate oxidase subunit proteinchromosome 1 CDS2779139 1077 - 0.759517
NA RSP_0974 Succinate dehydrogenase cytochrome b-556 subunitchromosome 1 CDS2735026 384 + 0.651042
NA RSP_0975 putative succinate dehydrogenase, hydrophobic membrane anchor proteinchromosome 1 CDS2735421 372 + 0.645161
NA RSP_0407 putative lactate dehydrogenasechromosome 1 CDS2140469 996 - 0.680723
NA RSP_0809 conserved hypothetical proteinchromosome 1 CDS2552780 579 + 0.728843
NA RSP_1574 Cytochrome b562chromosome 1 CDS166389 477 + 0.67086
NA RSP_2120 putative D-lactate dehydrogenase (cytochrome), FAD/FMN-containing oxidoreductasechromosome 1 CDS720796 1374 - 0.715429
NA RSP_1255 Phosphate acetyl/butaryl transferasechromosome 1 CDS3023043 1422 - 0.694093
NA RSP_2424 ferredoxin IIchromosome 1 CDS1055596 339 + 0.622419
NA RSP_0294 conserved hypotheticalchromosome 1 CDS2023073 1092 + 0.648352
NA RSP_1545 Probable thiol oxidoreductase with 2 cytochrome c heme-binding siteschromosome 1 CDS136202 1509 - 0.713055
NA RSP_2020 DHC, diheme cytochrome cchromosome 1 CDS621117 486 - 0.697531
NA RSP_1292 putative Aldehyde dehydrogenasechromosome 1 CDS3059735 1485 - 0.716498
NA RSP_1069 conserved hypothetical proteinchromosome 1 CDS2826338 645 + 0.741085
NA RSP_0117 Cytochrome c oxidase, subunit Ichromosome 1 CDS1830270 2574 - 0.681818
NA RSP_0716 NADPH/quinone reductase and related Zn-dependent oxidoreductaseschromosome 1 CDS2462206 987 - 0.727457
NA RSP_1821 Molybdopterin-containing oxidoreductase, probable formate dehydrogenasechromosome 1 CDS410429 2301 - 0.671447
NA RSP_1018 Glycolate oxidase iron-sulfur subunitchromosome 1 CDS2777825 1302 - 0.702765
NA RSP_0960 alcohol dehydrogenasechromosome 1 CDS2717534 1293 - 0.653519
NA RSP_2741 Class I diheme cytochrome c4chromosome 1 CDS1391623 597 + 0.710218
NA RSP_2349 hypothetical proteinchromosome 1 CDS974266 633 - 0.647709
NA RSP_0428 conserved hypothetical proteinchromosome 1 CDS2161946 1323 - 0.727891
NA RSP_2962 Methylmalonic acid semialdehyde dehydrogenasechromosome 1 CDS1644753 1500 + 0.680667
NA RSP_1806 Aconitate hydratasechromosome 1 CDS389587 2745 - 0.662295
NA RSP_2948 Putative Pyruvate ferredoxin/flavodoxin oxidoreductasechromosome 1 CDS1628096 3387 - 0.685562
NA RSP_0187 Dihydroorotate dehydrogenasechromosome 1 CDS1903823 1305 - 0.665134
NA RSP_1857 hypothetical proteinchromosome 1 CDS453318 471 + 0.675159
NA RSP_1656 hypothetical proteinchromosome 1 CDS250745 186 + 0.650538
NA RSP_1507 Aldehyde dehydrogenasechromosome 1 CDS90784 1461 - 0.693361
NA RSP_0206 hypothetical proteinchromosome 1 CDS1921201 507 - 0.631164
NA RSP_1891 Zinc-binding dehydrogenasechromosome 1 CDS487915 960 - 0.73125
NA RSP_1751 putative 2Fe-2S ferredoxin proteinchromosome 1 CDS333068 369 + 0.658537
NA RSP_0775 Class I monoheme cytochrome cchromosome 1 CDS2518258 420 - 0.695238
NA RSP_0545 hypothetical proteinchromosome 1 CDS2281065 768 - 0.764323
NA RSP_1217 putative Malic oxidoreductase; Pta, Phosphotransacetylasechromosome 1 CDS2987375 2280 - 0.665789
NA RSP_0446 Isocitrate dehydrogenasechromosome 1 CDS2176388 1215 + 0.646914
NA RSP_2318 putative Aldehyde dehydrogenasechromosome 1 CDS940362 1389 - 0.680346
NA RSP_2317 Iron-containing alcohol dehydrogenasechromosome 1 CDS939220 1146 - 0.671902
NA RSP_2571 putative oxidoreductase proteinchromosome 1 CDS1215772 1038 + 0.704239
NA RSP_0475 cytochrome bchromosome 1 CDS2210230 600 + 0.706667
NA RSP_1664 hypothetical proteinchromosome 1 CDS256614 453 - 0.719647
NA RSP_0705 Cytochrome cychromosome 1 CDS2450768 525 - 0.68381
CycF RSP_2785 Cytochrome c-554chromosome 1 CDS1432963 462 - 0.677489
PntB RSP_0239 Pyridine nucleotide transhydrogenase beta subunitchromosome 1 CDS1960590 1449 - 0.666667
adh RSP_1824 Zinc-containing alcohol dehydrogenasechromosome 1 CDS415379 1125 + 0.730667
adhI RSP_2576 Alcohol dehydrogenase class IIIchromosome 1 CDS1220336 1131 + 0.66313
atpA RSP_2297 F0F1-type ATP synthase alpha subunitchromosome 1 CDS919693 1539 + 0.661469
atpB RSP_1038 FoF1 ATP synthase, subunit Achromosome 1 CDS2800343 744 - 0.634409
atpC RSP_2300 ATP synthase, delta/epsilon subunitchromosome 1 CDS923578 399 + 0.699248
atpD RSP_2299 F1-ATP synthase beta subunitchromosome 1 CDS922141 1428 + 0.662465
atpE RSP_1037 FoF1 ATP synthase, subunit Cchromosome 1 CDS2800054 237 - 0.658228
atpG RSP_2298 ATP synthase, gamma subunitchromosome 1 CDS921254 870 + 0.666667
atpH RSP_2296 ATPase, delta (OSCP) subunitchromosome 1 CDS919132 561 + 0.666667
atpX RSP_1036 FoF1 ATP synthase, subunit Bchromosome 1 CDS2799442 543 - 0.674033
bchB RSP_0286 light-independent protochlorophyllide reductasechromosome 1 CDS2012366 1605 + 0.686604
bchE RSP_0281 Magnesium-protoporphyrin IX monomethylester oxidative cyclase, 66 kDa subunit(bchE)chromosome 1 CDS2005924 1839 - 0.650353
bchN RSP_0285 light-independent protochlorophyllide reductasechromosome 1 CDS2011009 1287 + 0.718726
bchP RSP_0277 Geranylgeranyl hydrogenasechromosome 1 CDS2001848 1185 - 0.674262
bchZ RSP_0260 putative chlorophyllide reductase, BchZ subunitchromosome 1 CDS1983312 1476 - 0.660569
betB RSP_2183 Betaine aldehyde dehydrogenasechromosome 1 CDS788659 1452 + 0.711433
cbbS RSP_1281 Ribulose bisphosphate carboxylase, small subunitchromosome 1 CDS3048508 390 - 0.65641
ccmG RSP_1805 Probable thiol-disulfide interchange proteinchromosome 1 CDS388849 540 + 0.701852
ccoO RSP_0695 Cbb3-type cytochrome c oxidase CcoO subunitchromosome 1 CDS2437948 726 - 0.641873
ccoP RSP_0693 Cbb3-type cytochrome c oxidase CcoP subunitchromosome 1 CDS2436863 873 - 0.654066
coxI RSP_1877 Cytochrome c oxidase, aa3 type, subunit Ichromosome 1 CDS475308 1701 - 0.633157
coxII RSP_1826 Cytochrome c oxidase polypeptide II precursor (Cytochrome AA3 subunit 2)chromosome 1 CDS418133 912 + 0.66557
coxIII RSP_1829 Cytochrome c oxidase, aa3-type, subunit IIIchromosome 1 CDS420825 801 + 0.637953
coxL RSP_2877 Putative carbon monoxide dehydrogenase large chainchromosome 1 CDS1546632 2373 - 0.673409
coxS RSP_2878 Putative carbon-monoxide dehydrogenase small chainchromosome 1 CDS1549033 483 - 0.662526
cycA RSP_0296 Cytochrome c2chromosome 1 CDS2025438 438 + 0.643836
cycB RSP_2579 cytochrome c553ichromosome 1 CDS1224206 531 + 0.670433
cycG RSP_2784 Diheme class I cytochrome cchromosome 1 CDS1432069 891 - 0.701459
cycI RSP_2577 isocytochrome c2chromosome 1 CDS1221596 435 + 0.694253
cycP RSP_0474 Cytochrome c'chromosome 1 CDS2209777 450 + 0.666667
etfA RSP_1690 Electron transfer flavoprotein, alpha subunitchromosome 1 CDS280096 927 - 0.696872
etfB RSP_1691 Electron transfer flavoprotein beta-subunitchromosome 1 CDS281022 762 - 0.656168
fbcB RSP_1395 Cytochrome bchromosome 1 CDS3173109 1338 - 0.636024
fbcC RSP_1394 Cytochrome c1 precursorchromosome 1 CDS3172234 858 - 0.668998
fbcF RSP_1396 Ubiquinol-cytochrome C reductase, iron-sulfur proteinchromosome 1 CDS3174457 564 - 0.673759
fdsB RSP_1079 NAD dependent formate dehydrogenase, beta subunit (51 kDa)chromosome 1 CDS2834865 1530 + 0.694118
fdsC RSP_1081 formate dehydrogenase chain Cchromosome 1 CDS2839270 816 + 0.718137
fdsG RSP_1078 NAD-dependent formate dehydrogenase, gamma subunit (24 kDa)chromosome 1 CDS2834395 474 + 0.71308
fumC RSP_2138 Fumarate lyasechromosome 1 CDS738047 1395 - 0.655197
gabD4 RSP_1012 succinate-semialdehyde dehdyrogenasechromosome 1 CDS2770541 1536 + 0.678385
glcB RSP_1980 malate synthase G proteinchromosome 1 CDS571682 2217 - 0.692377
glcD RSP_1020 putative glycolate oxidase subunit proteinchromosome 1 CDS2780280 1434 - 0.694561
glpD RSP_2670 putative FAD-dependent glycerol-3-phosphate dehydrogenasechromosome 1 CDS1311961 1620 - 0.702469
glpK RSP_2662 Glycerol kinasechromosome 1 CDS1304004 1482 - 0.707827
gltA RSP_1994 Citrate synthasechromosome 1 CDS590962 1287 - 0.641026
gor RSP_0358 probable glutathione reductasechromosome 1 CDS2088688 1359 - 0.696836
hupC RSP_0498 Ni, Fe hydrogenase I cytochrome b subunitchromosome 1 CDS2235213 648 + 0.62963
hupD RSP_0499 HycI, hydrogenase maturation proteasechromosome 1 CDS2236151 621 + 0.713366
hupH RSP_0502 HupH hydrogenase expression/formation proteinchromosome 1 CDS2237483 819 + 0.697192
hupJ RSP_0503 HupJ, contains rubredoxin domainchromosome 1 CDS2238298 759 + 0.683794
hupL RSP_0496 hydrogenase protein large subunitchromosome 1 CDS2232694 1791 + 0.654383
hupS RSP_0495 hydrogenase protein small subunitchromosome 1 CDS2231581 1110 + 0.657658
hupU RSP_0492 hydrogenase small subunitchromosome 1 CDS2226442 993 + 0.70997
hupV RSP_0493 hydrogenase large subunitchromosome 1 CDS2227431 1428 + 0.736695
icd RSP_1559 Isocitrate/isopropylmalate dehydrogenasechromosome 1 CDS147831 1215 + 0.64856
lctB RSP_0829 Lactate dehydrogenasechromosome 1 CDS2573953 1164 - 0.675258
leuB RSP_0859 hypothetical proteinchromosome 1 CDS2609508 1056 - 0.679924
mdh RSP_0968 Malate dehydrogenasechromosome 1 CDS2730174 1017 - 0.654867
merA1 RSP_1057 Putative mercuric reductase proteinchromosome 1 CDS2815570 1413 - 0.713376
nahG RSP_2656 putative salicylate hydroxylase (Salicylate 1-monooxygenase)chromosome 1 CDS1297615 1176 + 0.715986
nemA RSP_2805 Putative NADH-flavin oxidoreductasechromosome 1 CDS1511542 1089 - 0.69146
nifD RSP_0540 Nitrogenase iron-molybdenum protein, alpha chainchromosome 1 CDS2276885 1482 - 0.626856
nifE RSP_0538 nifE, nitrogenase molybdenum-cofactor synthesis proteinchromosome 1 CDS2273554 1464 - 0.69194
nifK RSP_0539 nitrogenase molybdenum-iron protein beta chainchromosome 1 CDS2275264 1521 - 0.642998
nifN RSP_0537 nitrogenase molybdenum-iron protein beta chain, nifNchromosome 1 CDS2272187 1368 - 0.705409
nifU RSP_2625 NifU-related protein involved in Fe-S cluster formationchromosome 1 CDS1265057 441 - 0.714286
norC RSP_0324 nitric oxide reductase subunit C, cytochrome cchromosome 1 CDS2052394 453 - 0.660044
nuoA RSP_0100 putative NADH dehydrogenase I chain Achromosome 1 CDS1812328 387 + 0.710594
nuoA RSP_2512 NADH dehydrogenase-ubiquinone oxidoreductase, chain Achromosome 1 CDS1158265 366 + 0.598361
nuoB RSP_2513 NADH dehydrogenase-ubiquinone oxidoreductase, chain Bchromosome 1 CDS1158627 525 + 0.672381
nuoB RSP_0101 NADH dehydrogenase (ubiquinone), 20 kDa subunitchromosome 1 CDS1812711 618 + 0.700647
nuoC RSP_2514 NADH dehydrogenase-ubiquinone oxidoreductase, chain Cchromosome 1 CDS1159162 603 + 0.648425
nuoCD RSP_0102 NADH-ubiquinone oxidoreductase, chain 49kDa / NADH dehydrogenase (ubiquinone), 30 kDa subunitchromosome 1 CDS1813325 1743 + 0.68101
nuoD RSP_2515 NADH dehydrogenase-ubiquinone oxidoreductase, chain Dchromosome 1 CDS1159769 1215 + 0.652675
nuoE RSP_0103 NADH dehydrogenase (ubiquinone), 24 kDa subunitchromosome 1 CDS1815064 474 + 0.719409
nuoE RSP_2516 NADH dehydrogenase-ubiquinone oxidoreductase, chain Echromosome 1 CDS1160983 912 + 0.700658
nuoF RSP_2518 NADH dehydrogenase-ubiquinone oxidoreductase, chain Fchromosome 1 CDS1162117 1296 + 0.67284
nuoF RSP_0104 Respiratory-chain NADH dehydrogenase, 51 kDa subunitchromosome 1 CDS1815534 1251 + 0.727418
nuoG RSP_0105 Respiratory-chain NADH dehydrogenase, 75 kDa subunitchromosome 1 CDS1816781 2583 + 0.749129
nuoG RSP_2521 NADH dehydrogenase-ubiquinone oxidoreductase, chain Gchromosome 1 CDS1163936 1965 + 0.695674
nuoH RSP_2522 Respiratory-chain NADH dehydrogenase, subunit 1chromosome 1 CDS1166342 1038 + 0.631985
nuoH RSP_0106 putative NADH dehydrogenase I chain Hchromosome 1 CDS1819560 957 + 0.698015
nuoI RSP_0107 NADH-quinone oxidoreductase, chain I, ferredoxinchromosome 1 CDS1820513 495 + 0.668687
nuoI RSP_2523 Subunit of NADH-ubiquinone oxidoreductase (Complex I) that contains 2 Fe-S centerschromosome 1 CDS1167381 504 + 0.640873
nuoJ RSP_2525 NADH dehydrogenase I-ubiquinone oxidoreductase subunit 6 (chain J)chromosome 1 CDS1168288 615 + 0.658537
nuoK RSP_2526 NADH-ubiquinone oxidoreductase subunit 11 or 4L (chain K)chromosome 1 CDS1169062 306 + 0.607843
nuoL RSP_2527 NADH dehydrogenase I chain Lchromosome 1 CDS1169373 2163 + 0.658345
nuoL RSP_0110 NADH-ubiquinone oxidoreductase, chain 5chromosome 1 CDS1821805 2103 + 0.700428
nuoM RSP_2529 NADH dehydrogenase I chain M (NADH-ubiquinone oxidoreductase chain 13)chromosome 1 CDS1171535 1542 + 0.642023
nuoN RSP_2530 NADH dehydrogenase I chain Nchromosome 1 CDS1173087 1437 + 0.664579
nuoN RSP_0112 NADH-ubiquinone oxidoreductase, chain 4chromosome 1 CDS1825347 1344 + 0.738095
pckA RSP_1680 Phosphoenolpyruvate carboxykinasechromosome 1 CDS270577 1599 - 0.661038
pdhAa RSP_4047 Pyruvate dehydrogenase E1 component, alpha subunitchromosome 1 CDS1124389 990 - 0.651515
pdhAb RSP_4049 Pyruvate dehydrogenase E1 component, beta subunitchromosome 1 CDS1122984 1392 - 0.667385
pdhB RSP_4050 Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complexchromosome 1 CDS1121645 1329 - 0.693002
phaD RSP_0994 pH adaption potassium efflux system, PhaD subunitchromosome 1 CDS2753559 1512 + 0.699074
pntA RSP_0240 Pyridine nucleotide transhydrogenase alpha subunitchromosome 1 CDS1962049 1572 - 0.67112
ppaZ RSP_2331 PpaZ, a novel pseudoazurin precursor (Blue Copper Protein)chromosome 1 CDS957264 459 + 0.67756
prkA RSP_1284 Phosphoribulokinasechromosome 1 CDS3051587 873 - 0.652921
pufX RSP_0255 Intrinsic membrane pufX protienchromosome 1 CDS1980460 249 - 0.60241
putA RSP_2166 Bifunctional putA protein; Proline dehydrogenase / Delta-1-pyrroline-5-carboxylate dehydrogenasechromosome 1 CDS767735 3642 + 0.73229
pycA RSP_2090 Pyruvate carboxylasechromosome 1 CDS684379 3465 - 0.671573
rdxB RSP_0692 iron-sulfur cluster-binding proteinchromosome 1 CDS2435195 1434 - 0.668061
sdhA RSP_0976 Succinate dehydrogenase flavoprotein subunitchromosome 1 CDS2735804 1803 + 0.685524
sdhB RSP_0979 Succinate dehydrogenase iron-sulfur proteinchromosome 1 CDS2738227 780 + 0.633333
sucA RSP_0965 2-oxoglutarate dehydrogenase E1 component (Alpha-ketoglutarate dehydrogenase)chromosome 1 CDS2724844 2979 - 0.652232
sucB RSP_0964 Dihydrolipoamide transsuccinylasechromosome 1 CDS2723312 1533 - 0.687541
sucC RSP_0967 Succinyl-CoA synthetase, beta subunitchromosome 1 CDS2728751 1194 - 0.649916
sucD RSP_0966 Succinyl-CoA synthetase, alpha subunitchromosome 1 CDS2727862 885 - 0.668927
trxA RSP_1529 Thioredoxinchromosome 1 CDS117813 321 + 0.660436