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2024-05-19 09:37:43

Gene list

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COG category: Energy production and conversion
Genomic element: chromosome

Number of genes found: 219

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Methylococcus capsulatus str. Bath, Bath
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA MCA0428 hypothetical proteinchromosome CDS435387 465 + 0.63871
NA MCA2200 cytochrome c' family proteinchromosome CDS2375875 720 - 0.618056
NA MCA2872 monooxygenase family proteinchromosome CDS3065450 1350 - 0.639259
NA MCA2396 cytochrome c oxidase, subunit Ichromosome CDS2576349 1614 - 0.624535
NA MCA2725 NAD-reducing hydrogenase, gamma subunitchromosome CDS2919697 732 + 0.624317
NA MCA2788 alcohol dehydrogenase, zinc-containingchromosome CDS2979599 999 - 0.675676
NA MCA1407 D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS1494241 972 + 0.613169
NA MCA1922 glycerophosphoryl diester phosphodiesterase family proteinchromosome CDS2069018 1248 - 0.598558
NA MCA1209 formate dehydrogenase, iron-sulfur subunitchromosome CDS1270211 873 - 0.643757
NA MCA2384 Na(+)-translocating NADH-quinone reductase, F subunitchromosome CDS2564261 1224 - 0.589052
NA MCA2813 4Fe-4S binding domain proteinchromosome CDS3002387 1353 + 0.621582
NA MCA2618 cytochrome c-555chromosome CDS2805227 372 + 0.610215
NA MCA0232 ferredoxin, 2Fe-2Schromosome CDS230591 369 + 0.639566
NA MCA2859 putative formylmethanofurane dehydrogenase, A subunitchromosome CDS3051796 1668 - 0.622302
NA MCA2820 electron transport complex, G subunitchromosome CDS3010925 693 - 0.666667
NA MCA2603 cytochrome c family proteinchromosome CDS2789536 609 - 0.640394
NA MCA0293 conserved hypothetical proteinchromosome CDS285423 2133 - 0.654477
NA MCA2894 electron transport complex, B subunitchromosome CDS3085112 537 + 0.666667
NA MCA2724 NAD-reducing hydrogenase, alpha subunitchromosome CDS2917848 1833 + 0.627932
NA MCA2577 putative dehydrogenase subunitchromosome CDS2761558 1686 - 0.680308
NA MCA2984 conserved hypothetical proteinchromosome CDS3159162 1065 - 0.630047
NA MCA0258 ferredoxin, 2Fe-2Schromosome CDS249610 324 + 0.62963
NA MCA0513 putative NADH ubiquinone/plastoquinone complex subunitchromosome CDS529905 1530 + 0.686275
NA MCA0515 putative NADH ubiquinone/plastoquinone complex subunitchromosome CDS533015 1536 + 0.66862
NA MCA2485 aconitate hydratasechromosome CDS2664233 2577 - 0.656965
NA MCA1041 thiol:disulfide interchange protein, DsbD familychromosome CDS1092330 2238 + 0.654155
NA MCA2408 conserved hypothetical proteinchromosome CDS2585844 483 + 0.608696
NA MCA0285 PBS lyase HEAT-like repeat domain proteinchromosome CDS270838 2448 - 0.629085
NA MCA0182 oxidoreductase, FAD-bindingchromosome CDS193696 1404 - 0.665954
NA MCA2389 Na(+)-translocating NADH-quinone reductase, A subunitchromosome CDS2568895 1359 - 0.631347
NA MCA0883 cytochrome c oxidase, subunit IIIchromosome CDS929111 867 + 0.61015
NA MCA1393 formate dehydrogenase, gamma subunitchromosome CDS1479243 480 - 0.595833
NA MCA1138 hydrogenase subunitchromosome CDS1193735 1584 - 0.6875
NA MCA1543 fumarate hydratasechromosome CDS1644087 1410 - 0.652482
NA MCA2566 putative oxidoreductase, FAD-bindingchromosome CDS2748331 1302 + 0.639785
NA MCA2765 hypothetical proteinchromosome CDS2958055 654 - 0.611621
NA MCA1697 flavodoxinchromosome CDS1816642 537 - 0.607076
NA MCA0769 pyruvate ferredoxin/flavodoxin oxidoreductase family proteinchromosome CDS808541 3567 - 0.654331
NA MCA2896 electron transport complex, D subunitchromosome CDS3087223 1032 + 0.661822
NA MCA1252 V-type H(+)-translocating pyrophosphatasechromosome CDS1332241 2133 + 0.645101
NA MCA1872 C4-dicarboxylate transporterchromosome CDS2012729 1293 - 0.6628
NA MCA1757 putative oxidoreductasechromosome CDS1878485 3927 + 0.658518
NA MCA1187 cytochrome c family proteinchromosome CDS1242646 1368 - 0.635965
NA MCA1142 hydrogenase subunitchromosome CDS1198438 2247 - 0.678238
NA MCA0639 NADH-dependent flavin oxidoreductase, Oye familychromosome CDS673420 1119 + 0.659517
NA MCA2860 formylmethanofuran dehydrogenasechromosome CDS3053492 1272 - 0.658019
NA MCA2405 cytochrome c family proteinchromosome CDS2584116 318 + 0.59434
NA MCA1188 inorganic H(+)-translocating pyrophosphatasechromosome CDS1244380 1932 + 0.689441
NA MCA2420 acetyltransferase, GNAT familychromosome CDS2596047 2679 + 0.655842
NA MCA2267 putative nitroreductase family proteinchromosome CDS2463480 612 - 0.673203
NA MCA0460 ferredoxin, 4Fe-4Schromosome CDS476927 264 + 0.613636
NA MCA1494 putative oxidoreductase, FAD-bindingchromosome CDS1592110 1368 + 0.638889
NA MCA0166 nickel-iron hydrogenase, small subunitchromosome CDS177012 1089 - 0.644628
NA MCA0216 putative ferredoxin, 2Fe-2Schromosome CDS217110 342 + 0.616959
NA MCA0114 NAD-reducing hydrogenase, beta subunitchromosome CDS119597 1485 - 0.649158
NA MCA2397 cytochrome c oxidase, subunit IIchromosome CDS2577959 534 - 0.636704
NA MCA0713 acylphosphatasechromosome CDS753404 279 + 0.698925
NA MCA1185 cytochrome c family proteinchromosome CDS1240773 645 - 0.665116
NA MCA1775 cytochrome c family proteinchromosome CDS1904911 819 + 0.659341
NA MCA2819 electron transport complex, E subunitchromosome CDS3010242 687 - 0.63901
NA MCA2292 conserved hypothetical proteinchromosome CDS2487153 324 - 0.688272
NA MCA0866 putative oxygen-independent coproporphyrinogen III oxidase family proteinchromosome CDS912399 1515 + 0.638284
NA MCA1068 cytochrome c family proteinchromosome CDS1123222 621 + 0.602254
NA MCA0163 nickel-iron hydrogenase, small subunitchromosome CDS173889 687 - 0.643377
NA MCA0403 putative suppressor for copper-sensitivity Dchromosome CDS406200 489 + 0.691207
NA MCA0430 4Fe-4S binding domain proteinchromosome CDS437933 1050 + 0.624762
NA MCA0165 nickel-iron hydrogenase, large subunitchromosome CDS175203 1794 - 0.634894
NA MCA2387 Na(+)-translocating NADH-quinone reductase, C subunitchromosome CDS2566774 834 - 0.601918
NA MCA1139 hydrogenase subunitchromosome CDS1195354 1467 - 0.655078
NA MCA1867 putative ferredoxin, 2Fe-2Schromosome CDS2007197 363 - 0.655647
NA MCA2385 Na(+)-translocating NADH-quinone reductase, E subunitchromosome CDS2565501 609 - 0.586207
NA MCA0738 radical SAM domain/B12 binding domain proteinchromosome CDS777502 1548 - 0.616925
NA MCA1557 putative ATP synthase F1, epsilon subunitchromosome CDS1658257 408 + 0.642157
NA MCA2319 putative formylmethanofurane dehydrogenase, subunitchromosome CDS2511486 1719 - 0.660268
NA MCA2823 electron transport complex, B subunitchromosome CDS3014192 549 - 0.663024
NA MCA1140 hydrogenase subunitchromosome CDS1196817 678 - 0.643068
NA MCA1254 rubredoxinchromosome CDS1336693 171 + 0.561404
NA MCA0988 NifU family proteinchromosome CDS1034322 381 - 0.656168
NA MCA1208 putative formate dehydrogenase, gamma subunitchromosome CDS1269579 636 - 0.643082
NA MCA0940 cytochrome c family proteinchromosome CDS982720 390 + 0.602564
NA MCA1392 formate dehydrogenase, beta subunitchromosome CDS1477696 1551 - 0.647324
NA MCA0335 conserved hypothetical proteinchromosome CDS329353 3696 - 0.639069
NA MCA2898 electron transport complex, E subunitchromosome CDS3089006 702 + 0.645299
NA MCA2701 putative ATP synthase F1, delta subunitchromosome CDS2886521 762 + 0.664042
NA MCA1210 formate dehydrogenase, alpha subunitchromosome CDS1271086 3201 - 0.642299
NA MCA0005 putative ATP synthase protein Ichromosome CDS4268 372 + 0.575269
NA MCA2020 conserved hypothetical proteinchromosome CDS2168884 558 + 0.629032
NA MCA2824 electron transport complex, A subunitchromosome CDS3014763 582 - 0.620275
NA MCA0781 cytochrome c family proteinchromosome CDS826019 480 + 0.6125
NA MCA0222 conserved hypothetical proteinchromosome CDS220563 1590 - 0.683648
NA MCA0248 NifU family proteinchromosome CDS243163 420 + 0.609524
NA MCA0162 hydrogenase expression/formation proteinchromosome CDS173279 606 - 0.678218
NA MCA0514 putative NADH ubiquinone/plastoquinone complex subunitchromosome CDS531445 1551 + 0.674404
NA MCA0724 monooxygenase, FAD-bindingchromosome CDS762597 1386 - 0.634199
NA MCA2571 radical SAM domain proteinchromosome CDS2752619 1098 - 0.655738
NA MCA1549 putative succinate dehydrogenase, hydrophobic membrane anchor proteinchromosome CDS1651275 381 + 0.619423
NA MCA0287 ferredoxin, 4Fe-4Schromosome CDS277683 1263 - 0.677751
NA MCA1042 thiol:disulfide interchange protein like proteinchromosome CDS1094668 408 + 0.688725
NA MCA0797 hydrolase, haloacid dehalogenase-like familychromosome CDS838116 684 - 0.641813
NA MCA2822 electron transport complex, C subunitchromosome CDS3012702 1488 - 0.678763
NA MCA2821 electron transport complex, D subunitchromosome CDS3011626 1080 - 0.662963
NA MCA2395 cytochrome c family proteinchromosome CDS2575717 630 - 0.657143
NA MCA1141 hydrogenase subunitchromosome CDS1197500 939 - 0.671991
NA MCA2181 cytochrome c family proteinchromosome CDS2354278 813 - 0.659287
NA MCA2508 putative oxygenasechromosome CDS2684153 975 + 0.629744
NA MCA2289 nitroreductase family proteinchromosome CDS2484616 666 - 0.68018
NA MCA2895 electron transport complex, C subunitchromosome CDS3085648 1572 + 0.665394
NA MCA0856 conserved hypothetical proteinchromosome CDS904186 273 - 0.611722
NA MCA1302 putative iron-sulfur cluster binding proteinchromosome CDS1389623 1122 + 0.661319
NA MCA2470 ferredoxin, 4Fe-4Schromosome CDS2647654 324 - 0.540123
NA MCA1372 nitroreductase family proteinchromosome CDS1460669 822 - 0.689781
NA MCA1754 monooxygenase, FAD-bindingchromosome CDS1874827 1218 - 0.659277
NA MCA2897 electron transport complex, G subunitchromosome CDS3088371 639 + 0.660407
NA MCA1257 resA domain proteinchromosome CDS1338701 498 + 0.638554
NA MCA2857 putative formylmethanofurane dehydrogenase subunitchromosome CDS3050056 813 - 0.603936
NA MCA0431 flavodoxin domain proteinchromosome CDS439302 2652 + 0.654977
NA MCA1499 glycolate oxidase, iron-sulfur subunitchromosome CDS1596599 1209 - 0.691481
NA MCA0948 cytochrome c family proteinchromosome CDS991386 372 + 0.577957
NA MCA2386 Na(+)-translocating NADH-quinone reductase, D subunitchromosome CDS2566109 660 - 0.586364
NA MCA1748 iron-sulfur cluster binding proteinchromosome CDS1864425 1200 + 0.669167
NA MCA1636 conserved hypothetical proteinchromosome CDS1741571 555 + 0.636036
NA MCA1404 FAD-binding proteinchromosome CDS1490644 1737 - 0.504893
NA MCA1548 putative succinate dehydrogenase, cytochrome b556 subunitchromosome CDS1650853 417 + 0.652278
NA MCA1137 hydrogenase subunitchromosome CDS1193214 510 - 0.666667
NA MCA2401 conserved domain proteinchromosome CDS2580295 603 - 0.603648
NA MCA1799 cytochrome c family proteinchromosome CDS1929583 300 + 0.593333
NA MCA0880 cytochrome c oxidase, subunit Ichromosome CDS926742 1626 + 0.602706
NA MCA2185 putative lipoproteinchromosome CDS2356939 387 - 0.614987
NA MCA0238 ferredoxin, 4Fe-4Schromosome CDS235620 309 + 0.582524
NA MCA0256 ferredoxin, 2Fe-2Schromosome CDS248741 327 + 0.651376
NA MCA2388 Na(+)-translocating NADH-quinone reductase, B subunitchromosome CDS2567687 1203 - 0.604323
NA MCA3071 putative isocitrate dehydrogenase, NAD-dependentchromosome CDS3255041 1023 + 0.650049
NA MCA0253 ferredoxin, 2Fe-2Schromosome CDS246751 339 + 0.637168
NA MCA2893 electron transport complex, A subunitchromosome CDS3084515 582 + 0.613402
NA MCA2726 NAD-reducing hydrogenase, delta subunitchromosome CDS2920421 543 + 0.635359
NA MCA0511 putative NADH ubiquinone/plastoquinone complex subunitchromosome CDS525098 1467 + 0.656442
NA MCA0205 ferredoxin, 4Fe-4Schromosome CDS211303 225 + 0.546667
NA MCA0760 ferredoxin, 2Fe-2Schromosome CDS801213 288 + 0.607639
NA MCA2858 formylmethanofurane tetrahydromethanopterin formyltransferasechromosome CDS3050903 897 - 0.639911
NA MCA1544 conserved hypothetical proteinchromosome CDS1645518 237 - 0.687764
NA MCA0879 cytochrome c oxidase, subunit IIchromosome CDS925588 1122 + 0.582888
aceE MCA3000 pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenasechromosome CDS3173672 2688 + 0.63058
aceF MCA3001 pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferasechromosome CDS3176376 1311 + 0.666667
ackA MCA1589 acetate kinasechromosome CDS1696262 1185 + 0.681013
atpA-1 MCA0010 ATP synthase F1, alpha subunitchromosome CDS6842 1542 + 0.623865
atpA-2 MCA2707 ATP synthase F1, alpha subunitchromosome CDS2891837 1512 + 0.671958
atpB-1 MCA0006 ATP synthase F0, A subunitchromosome CDS4667 780 + 0.587179
atpB-2 MCA2699 ATP synthase F0, A subunitchromosome CDS2885569 687 + 0.641921
atpC-1 MCA0013 ATP synthase F1, epsilon subunitchromosome CDS10701 423 + 0.676123
atpC-2 MCA3021 ATP synthase F1, epsilon subunitchromosome CDS3206445 450 - 0.653333
atpD MCA1556 ATP synthase F1, beta subunitchromosome CDS1656884 1377 + 0.653595
atpD-1 MCA0012 ATP synthase F1, beta subunitchromosome CDS9293 1383 + 0.62979
atpE-1 MCA0007 ATP synthase F0, C subunitchromosome CDS5502 246 + 0.601626
atpE-2 MCA2700 ATP synthase F0, C subunitchromosome CDS2886252 267 + 0.636704
atpF MCA0008 ATP synthase F0, B subunitchromosome CDS5810 474 + 0.582278
atpG-1 MCA0011 ATP synthase F1, gamma subunitchromosome CDS8394 864 + 0.635417
atpG-2 MCA2708 ATP synthase F1, gamma subunitchromosome CDS2893345 828 + 0.650966
atpH MCA0009 ATP synthase F1, delta subunitchromosome CDS6290 537 + 0.590317
cbbP MCA3051 phosphoribulokinasechromosome CDS3238358 879 + 0.534699
cbbS MCA2744 ribulose bisphosphate carboxylase, small subunitchromosome CDS2936124 357 + 0.613445
cydA MCA1105 cytochrome d ubiquinol oxidase, subunit Ichromosome CDS1160863 1578 + 0.612167
cydB MCA1106 cytochrome d ubiquinol oxidase, subunit IIchromosome CDS1162460 1137 + 0.638522
cyp51 MCA2711 cytochrome P450 51chromosome CDS2897545 1656 + 0.654589
dsbA MCA2602 thiol:disulfide interchange protein DsbAchromosome CDS2788778 651 - 0.600614
dsbE-1 MCA0417 thiol:disulfide interchange protein DsbEchromosome CDS416547 567 - 0.62963
dsbE-2 MCA0434 thiol:disulfide interchange protein DsbEchromosome CDS445809 546 + 0.64652
fdhD MCA1390 formate dehydrogenase accessory protein FdhDchromosome CDS1473869 921 - 0.676439
gabD MCA1756 succinate-semialdehyde dehydrogenase (NADP+)chromosome CDS1876907 1476 + 0.670054
glcD MCA1501 glycolate oxidase, GlcD subunitchromosome CDS1598878 1455 - 0.674227
glcE MCA1500 glycolate oxidase, GlcE subunitchromosome CDS1597808 1062 - 0.710923
gltA MCA0847 citrate synthasechromosome CDS891889 1290 + 0.588372
gpsA MCA2538 glycerol-3-phosphate dehydrogenase (NAD(P)+)chromosome CDS2712933 1008 + 0.688492
hoxW MCA0113 HoxW proteinchromosome CDS119053 543 - 0.666667
leuB MCA2063 3-isopropylmalate dehydrogenasechromosome CDS2219854 1083 - 0.645429
lpdA MCA3002 pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenasechromosome CDS3177706 1422 + 0.654008
mdh MCA0610 malate dehydrogenasechromosome CDS645424 978 - 0.650307
merA MCA1340 mercuric reductasechromosome CDS1424708 1689 + 0.677916
mmoC MCA1200 methane monooxygenase, C subunitchromosome CDS1257758 1047 + 0.626552
nasA MCA0590 nitrate reductasechromosome CDS618410 2640 - 0.679545
ndh MCA1918 NADH dehydrogenasechromosome CDS2063664 1323 - 0.628118
nifD MCA0230 nitrogenase molybdenum-iron protein alpha chainchromosome CDS227222 1461 + 0.601643
nifE MCA0233 nitrogenase iron-molybdenum cofactor biosynthesis protein nifEchromosome CDS231399 1683 + 0.63874
nifK MCA0231 nitrogenase molybdenum-iron protein beta chainchromosome CDS228789 1560 + 0.591667
nifN MCA0234 nitrogenase molybdenum-iron cofactor biosynthesis protein NifNchromosome CDS233089 1374 + 0.643377
nirB MCA0592 nitrite reductase [NAD(P)H], large subunitchromosome CDS621391 2463 - 0.649208
nuoA MCA1359 NADH dehydrogenase I, A subunitchromosome CDS1445561 420 - 0.630952
nuoB MCA1358 NADH dehydrogenase I, B subunitchromosome CDS1444910 642 - 0.632399
nuoCD MCA1357 NADH dehydrogenase I, C/D subunitschromosome CDS1443128 1764 - 0.645692
nuoE MCA1356 NADH dehydrogenase I, E subunitchromosome CDS1442642 474 - 0.626582
nuoF MCA1355 NADH dehydrogenase I, F subunitchromosome CDS1441359 1284 - 0.66433
nuoG MCA1354 NADH dehydrogenase I, G subunitchromosome CDS1438577 2790 - 0.678136
nuoH MCA1353 NADH dehydrogenase I, H subunitchromosome CDS1437630 951 - 0.62776
nuoI MCA1352 NADH dehydrogenase I, I subunitchromosome CDS1437101 516 - 0.624031
nuoJ MCA1351 NADH dehydrogenase I, J subunitchromosome CDS1436584 495 - 0.608081
nuoK MCA1350 NADH dehydrogenase I, K subunitchromosome CDS1436264 309 - 0.644013
nuoL MCA1349 NADH dehydrogenase I, L subunitchromosome CDS1434414 1842 - 0.663409
nuoM MCA1348 NADH dehydrogenase I, M subunitchromosome CDS1432948 1470 - 0.653061
nuoN MCA1347 NADH dehydrogenase I, N subunitchromosome CDS1431465 1482 - 0.659244
oadA MCA2480 oxaloacetate decarboxylase, alpha subunitchromosome CDS2659410 1797 - 0.641068
oadB MCA2479 oxaloacetate decarboxylase, beta subunitchromosome CDS2658269 1128 - 0.628546
oadC MCA2481 oxaloacetate decarboxylase, gamma subunitchromosome CDS2661230 258 - 0.612403
petA MCA1962 ubiquinol-cytochrome c reductase, iron-sulfur subunitchromosome CDS2114415 597 - 0.644891
petB MCA1961 ubiquinol--cytochrome c reductase, cytochrome Bchromosome CDS2113036 1380 - 0.595652
petC MCA1960 ubiquinol--cytochrome c reductase, cytochrome c1chromosome CDS2112317 723 - 0.600277
pntA MCA2768 NAD(P) transhydrogenase, alpha subunitchromosome CDS2960790 1539 - 0.640026
pntB MCA2767 NAD(P) transhydrogenase, beta subunitchromosome CDS2959374 1398 - 0.61731
ppa MCA0112 inorganic pyrophosphatasechromosome CDS118557 549 + 0.601093
sdhA MCA1550 succinate dehydrogenase, flavoprotein subunitchromosome CDS1651661 1788 + 0.634228
sdhB MCA1542 succinate dehydrogenase, iron-sulfur proteinchromosome CDS1643272 783 - 0.627075
sfcA MCA1836 malate oxidoreductasechromosome CDS1963829 1653 + 0.678766
sucA MCA1952 2-oxoglutarate dehydrogenase, E1 componentchromosome CDS2100596 2814 + 0.64108
sucB MCA1953 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferasechromosome CDS2103375 1146 + 0.636998
sucC-1 MCA0967 succinyl-CoA synthase, beta subunitchromosome CDS1010404 1161 + 0.667528
sucC-2 MCA1740 succinyl-CoA synthase, beta subunitchromosome CDS1857628 1170 + 0.634188
sucD-1 MCA0968 succinyl-CoA synthase, alpha subunitchromosome CDS1011561 873 + 0.649485
sucD-2 MCA1741 succinyl-CoA synthase, alpha subunitchromosome CDS1858803 903 + 0.651163
trxA-1 MCA0057 thioredoxinchromosome CDS58769 330 - 0.606061
trxA-2 MCA2134 thioredoxinchromosome CDS2298409 420 + 0.683333
ubiH MCA2769 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS2962532 1206 - 0.686567